View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12597_high_39 (Length: 218)
Name: NF12597_high_39
Description: NF12597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12597_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 12 - 202
Target Start/End: Original strand, 44694373 - 44694563
Alignment:
| Q |
12 |
gagatgaatgtgatgtttgtagagttgatgaagaggtagacgatgaaaatgaagatgaagagattcggtttgatagagagtcgttttctagaatgcttcg |
111 |
Q |
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| T |
44694373 |
gagatgaatgtgatgtttgtagagttgatgaagaggtagacgatgaaaatgaagatgaagagattcggtttgatagagagtcgttttctagaatgcttcg |
44694472 |
T |
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| Q |
112 |
tagggtaactttagttgaagcaagaatgtatgcacacatgtctcacttggggaatttggcatactctattcccaatatcaaggtttatttc |
202 |
Q |
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| T |
44694473 |
tagggtaactttagttgaagcaagaatgtatgcacacatgtctcacttggggaatttggcatactctattcccaatatcaaggtttatttc |
44694563 |
T |
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