View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12597_high_41 (Length: 206)
Name: NF12597_high_41
Description: NF12597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12597_high_41 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 28600492 - 28600665
Alignment:
| Q |
16 |
caatatgtaggaagagataaaattaaatacattaatttaaggaaatcatttaagccaagttattttcatttgaaaaaatataaaatttccacactttgtc |
115 |
Q |
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| T |
28600492 |
caatatgtaggaagagataaaattaaatacattaatttgaggaaatcatttaagccaagttattttcatttgaaaa--tataaaatttccacactttgtc |
28600589 |
T |
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| Q |
116 |
gcataaagctatatacttggagagtagcttgttgattatggtttcctcatattttcttatacgttctagtgtctct |
191 |
Q |
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| T |
28600590 |
acataaagctatatacttggagagtagcttgttgattatggtttcctcatatttccttatacgttctagtgtctct |
28600665 |
T |
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