View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12597_low_9 (Length: 444)
Name: NF12597_low_9
Description: NF12597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12597_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 239 - 428
Target Start/End: Original strand, 21772514 - 21772703
Alignment:
| Q |
239 |
ggaaaaattgaaccaatttaattggtttgaattgaatttttgggttcatgatattt-gatttggttcctacacccatatacggggaaggaaacctcatac |
337 |
Q |
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| T |
21772514 |
ggaaaaattgaaccaatttaag-ggtttgaattgaatttttgggttcatgatattttgatttggttcctacacccatatacggggcaggaaacctcatac |
21772612 |
T |
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| Q |
338 |
ctcataatctataagccaaatacgaaagccttgagcacatatgcttacaacgaattaaggcttgaaaatatgagattattaagcaacttaa |
428 |
Q |
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| T |
21772613 |
ctcataatctataagccaaatacgaaagccttgagcacatatgcttacaacgaattaaggcttgaaaatatgagattattaagcaacttaa |
21772703 |
T |
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