View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12598_high_15 (Length: 525)

Name: NF12598_high_15
Description: NF12598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12598_high_15
NF12598_high_15
[»] chr7 (69 HSPs)
chr7 (219-478)||(5752096-5752355)
chr7 (1-173)||(13099317-13099490)
chr7 (4-173)||(27306076-27306243)
chr7 (1-149)||(21990423-21990571)
chr7 (5-164)||(9679336-9679495)
chr7 (2-173)||(26804784-26804955)
chr7 (1-173)||(11355531-11355705)
chr7 (1-173)||(20626311-20626481)
chr7 (1-173)||(20630202-20630372)
chr7 (1-173)||(20642621-20642791)
chr7 (1-173)||(21678339-21678506)
chr7 (1-173)||(31434892-31435062)
chr7 (1-174)||(42330845-42331013)
chr7 (1-176)||(21591986-21592159)
chr7 (1-173)||(44724852-44725022)
chr7 (1-173)||(443869-444044)
chr7 (43-173)||(11759449-11759575)
chr7 (2-173)||(42223432-42223600)
chr7 (1-173)||(4295781-4295950)
chr7 (22-165)||(9681116-9681257)
chr7 (43-173)||(20297684-20297810)
chr7 (1-149)||(39145855-39146002)
chr7 (1-148)||(22251455-22251601)
chr7 (43-173)||(20299782-20299908)
chr7 (43-173)||(38394308-38394434)
chr7 (6-174)||(21680308-21680473)
chr7 (3-173)||(27832488-27832651)
chr7 (50-173)||(7471821-7471940)
chr7 (43-173)||(1606701-1606827)
chr7 (50-172)||(28487882-28488000)
chr7 (43-173)||(48457975-48458100)
chr7 (1-173)||(40836583-40836759)
chr7 (43-174)||(44886-45013)
chr7 (50-173)||(9027034-9027153)
chr7 (43-167)||(3036046-3036166)
chr7 (1-158)||(37411982-37412141)
chr7 (43-174)||(43253357-43253484)
chr7 (54-173)||(22137411-22137527)
chr7 (50-173)||(25542857-25542976)
chr7 (50-173)||(28485894-28486013)
chr7 (54-173)||(40552438-40552554)
chr7 (43-173)||(7094301-7094427)
chr7 (1-173)||(24465810-24465975)
chr7 (48-173)||(1850308-1850429)
chr7 (50-173)||(7469864-7469982)
chr7 (54-173)||(40550161-40550277)
chr7 (43-176)||(2935590-2935719)
chr7 (51-162)||(35959-36066)
chr7 (54-173)||(3878911-3879027)
chr7 (51-173)||(7092054-7092172)
chr7 (1-173)||(24748868-24749035)
chr7 (54-171)||(38396972-38397084)
chr7 (3-161)||(26295723-26295873)
chr7 (43-173)||(7351491-7351618)
chr7 (43-138)||(18345863-18345955)
chr7 (1-173)||(24813348-24813513)
chr7 (4-173)||(22393999-22394161)
chr7 (99-173)||(1046757-1046831)
chr7 (99-173)||(1049129-1049203)
chr7 (54-138)||(22108401-22108483)
chr7 (43-173)||(7349117-7349243)
chr7 (54-173)||(40946663-40946777)
chr7 (52-173)||(7188861-7188979)
chr7 (99-173)||(20136991-20137066)
chr7 (1-176)||(25276403-25276569)
chr7 (123-173)||(31153691-31153740)
chr7 (104-173)||(1502816-1502883)
chr7 (1-67)||(20137061-20137125)
chr7 (120-148)||(25357324-25357352)
[»] chr1 (78 HSPs)
chr1 (1-173)||(39462782-39462956)
chr1 (1-173)||(28206912-28207086)
chr1 (1-158)||(27336799-27336958)
chr1 (1-173)||(50307389-50307564)
chr1 (1-158)||(27338990-27339149)
chr1 (1-173)||(14097815-14097987)
chr1 (1-173)||(47906533-47906704)
chr1 (1-173)||(2949079-2949250)
chr1 (1-173)||(6995540-6995718)
chr1 (1-174)||(12302348-12302523)
chr1 (1-173)||(23816149-23816323)
chr1 (1-167)||(25251127-25251292)
chr1 (1-157)||(15823809-15823968)
chr1 (1-173)||(41647183-41647355)
chr1 (1-168)||(11457327-11457493)
chr1 (22-173)||(50078635-50078787)
chr1 (1-174)||(50248416-50248588)
chr1 (10-173)||(4131221-4131384)
chr1 (1-173)||(18839851-18840022)
chr1 (1-173)||(28998094-28998271)
chr1 (1-173)||(29003810-29003987)
chr1 (52-173)||(3579431-3579550)
chr1 (1-173)||(13215349-13215518)
chr1 (1-173)||(18307372-18307543)
chr1 (52-173)||(31490226-31490345)
chr1 (43-173)||(10399669-10399797)
chr1 (29-173)||(47451922-47452065)
chr1 (1-173)||(31424862-31425033)
chr1 (43-173)||(46431548-46431674)
chr1 (1-173)||(16429221-16429387)
chr1 (1-173)||(38925328-38925499)
chr1 (39-173)||(2617825-2617955)
chr1 (1-173)||(13447117-13447291)
chr1 (1-167)||(9240940-9241103)
chr1 (43-173)||(16226480-16226607)
chr1 (1-173)||(17319150-17319321)
chr1 (43-173)||(20291768-20291894)
chr1 (43-173)||(47177674-47177801)
chr1 (43-175)||(15294676-15294803)
chr1 (43-175)||(16231875-16232004)
chr1 (54-174)||(39932398-39932515)
chr1 (43-173)||(20302753-20302879)
chr1 (43-173)||(47180025-47180152)
chr1 (43-173)||(51750351-51750476)
chr1 (1-173)||(25248398-25248569)
chr1 (43-175)||(9459275-9459403)
chr1 (43-175)||(9463102-9463230)
chr1 (43-173)||(13762148-13762275)
chr1 (43-173)||(23786151-23786278)
chr1 (39-148)||(25860278-25860382)
chr1 (43-173)||(31735365-31735490)
chr1 (22-174)||(40134231-40134379)
chr1 (1-148)||(17324327-17324483)
chr1 (43-173)||(13358885-13359011)
chr1 (52-173)||(31422706-31422827)
chr1 (1-174)||(15916655-15916822)
chr1 (53-174)||(30780361-30780483)
chr1 (1-167)||(17324484-17324654)
chr1 (58-173)||(51757862-51757973)
chr1 (43-173)||(28842806-28842931)
chr1 (1-173)||(17185979-17186145)
chr1 (1-130)||(50076563-50076690)
chr1 (1-167)||(25128136-25128301)
chr1 (50-173)||(24325982-24326101)
chr1 (1-132)||(16428917-16429043)
chr1 (54-165)||(16432705-16432813)
chr1 (43-156)||(2510202-2510311)
chr1 (1-173)||(8348905-8349068)
chr1 (1-167)||(6114959-6115120)
chr1 (50-173)||(14183455-14183573)
chr1 (43-138)||(28840991-28841083)
chr1 (50-167)||(18800429-18800542)
chr1 (1-173)||(13125310-13125474)
chr1 (1-89)||(6756791-6756877)
chr1 (58-173)||(51752696-51752805)
chr1 (16-173)||(30790250-30790402)
chr1 (4-79)||(26520061-26520134)
chr1 (1-156)||(16561732-16561878)
[»] chr6 (55 HSPs)
chr6 (1-173)||(9020224-9020398)
chr6 (3-173)||(3233567-3233739)
chr6 (1-173)||(11982872-11983045)
chr6 (1-173)||(3631784-3631955)
chr6 (1-166)||(15346645-15346806)
chr6 (1-173)||(15367330-15367498)
chr6 (1-173)||(3629711-3629881)
chr6 (50-173)||(24338295-24338417)
chr6 (4-169)||(30728673-30728837)
chr6 (11-173)||(15530003-15530167)
chr6 (1-173)||(26065279-26065457)
chr6 (1-173)||(26085248-26085426)
chr6 (43-176)||(33311472-33311601)
chr6 (52-173)||(3394716-3394837)
chr6 (43-173)||(2628727-2628853)
chr6 (43-173)||(12195354-12195481)
chr6 (43-173)||(33309203-33309329)
chr6 (50-173)||(14458607-14458727)
chr6 (43-175)||(29754547-29754676)
chr6 (43-173)||(26065961-26066088)
chr6 (43-173)||(26068235-26068362)
chr6 (45-173)||(28241163-28241286)
chr6 (1-174)||(1069562-1069734)
chr6 (43-173)||(5273055-5273183)
chr6 (43-173)||(14507018-14507143)
chr6 (43-173)||(1230090-1230216)
chr6 (1-173)||(13057493-13057659)
chr6 (54-174)||(19704402-19704521)
chr6 (1-167)||(14466622-14466785)
chr6 (1-173)||(32280295-32280463)
chr6 (9-167)||(22490921-22491073)
chr6 (43-173)||(30967548-30967673)
chr6 (54-174)||(4816070-4816186)
chr6 (3-173)||(15540990-15541154)
chr6 (54-173)||(26932403-26932518)
chr6 (99-173)||(8717195-8717268)
chr6 (99-173)||(18322493-18322566)
chr6 (51-174)||(22611023-22611139)
chr6 (52-173)||(25480227-25480346)
chr6 (1-173)||(25465444-25465606)
chr6 (120-173)||(13040179-13040232)
chr6 (51-173)||(30034447-30034562)
chr6 (54-173)||(17012387-17012502)
chr6 (1-163)||(26945444-26945600)
chr6 (1-90)||(12186000-12186087)
chr6 (53-173)||(16455280-16455394)
chr6 (1-157)||(28078063-28078210)
chr6 (1-173)||(3027703-3027867)
chr6 (54-157)||(20915213-20915312)
chr6 (119-173)||(10584358-10584413)
chr6 (1-66)||(13040053-13040117)
chr6 (1-156)||(19696740-19696887)
chr6 (2-87)||(12937126-12937208)
chr6 (120-173)||(28037576-28037630)
chr6 (50-156)||(6610378-6610478)
[»] chr5 (71 HSPs)
chr5 (2-173)||(36402170-36402343)
chr5 (1-165)||(2818186-2818351)
chr5 (1-175)||(39854746-39854923)
chr5 (1-173)||(6745331-6745507)
chr5 (1-173)||(6747567-6747743)
chr5 (1-173)||(18511056-18511228)
chr5 (50-173)||(41585580-41585702)
chr5 (1-173)||(2724156-2724328)
chr5 (1-167)||(17818340-17818508)
chr5 (1-173)||(24127119-24127291)
chr5 (1-173)||(31465833-31466005)
chr5 (1-159)||(16776420-16776580)
chr5 (1-173)||(20505687-20505859)
chr5 (1-173)||(26098129-26098304)
chr5 (1-174)||(658203-658372)
chr5 (52-173)||(34530559-34530679)
chr5 (43-173)||(3372977-3373104)
chr5 (1-172)||(6756755-6756926)
chr5 (43-173)||(18469321-18469448)
chr5 (1-173)||(36208839-36209007)
chr5 (1-166)||(40221786-40221956)
chr5 (1-173)||(18596909-18597079)
chr5 (1-167)||(21289024-21289187)
chr5 (1-173)||(37705626-37705796)
chr5 (1-173)||(1189454-1189623)
chr5 (1-167)||(2954679-2954843)
chr5 (3-169)||(21948291-21948464)
chr5 (43-173)||(34476894-34477020)
chr5 (43-176)||(38882400-38882528)
chr5 (1-173)||(696141-696310)
chr5 (43-173)||(10528937-10529065)
chr5 (1-134)||(18509201-18509334)
chr5 (1-148)||(17073147-17073296)
chr5 (1-146)||(20043253-20043397)
chr5 (43-173)||(25804336-25804463)
chr5 (1-165)||(10474176-10474339)
chr5 (43-173)||(10750011-10750137)
chr5 (43-173)||(10757487-10757613)
chr5 (43-173)||(18466996-18467123)
chr5 (43-173)||(34479259-34479385)
chr5 (1-135)||(26097994-26098127)
chr5 (50-174)||(38959971-38960091)
chr5 (43-173)||(39798342-39798468)
chr5 (50-148)||(20045298-20045395)
chr5 (50-172)||(12555757-12555880)
chr5 (43-167)||(27912848-27912969)
chr5 (54-177)||(23741693-23741813)
chr5 (43-173)||(10587127-10587252)
chr5 (1-173)||(25904366-25904536)
chr5 (43-173)||(27910745-27910872)
chr5 (3-173)||(16092045-16092213)
chr5 (50-174)||(21684293-21684412)
chr5 (1-173)||(31179213-31179387)
chr5 (50-173)||(4236947-4237065)
chr5 (54-173)||(15354414-15354530)
chr5 (54-173)||(15356690-15356806)
chr5 (54-173)||(23665368-23665484)
chr5 (54-173)||(23793103-23793219)
chr5 (43-154)||(25921333-25921440)
chr5 (43-173)||(2175213-2175341)
chr5 (52-173)||(4410343-4410458)
chr5 (44-154)||(31543047-31543153)
chr5 (1-173)||(15143731-15143896)
chr5 (50-172)||(6661038-6661155)
chr5 (52-173)||(39397857-39397970)
chr5 (101-173)||(31472458-31472531)
chr5 (43-154)||(31545395-31545502)
chr5 (1-174)||(20054100-20054267)
chr5 (54-173)||(15552569-15552685)
chr5 (23-85)||(2144504-2144561)
chr5 (55-138)||(23667644-23667725)
[»] chr3 (93 HSPs)
chr3 (1-173)||(18096740-18096914)
chr3 (1-173)||(32219328-32219503)
chr3 (2-174)||(24979952-24980127)
chr3 (1-173)||(18099010-18099184)
chr3 (1-173)||(36012070-36012243)
chr3 (3-175)||(53915336-53915508)
chr3 (1-173)||(53917506-53917678)
chr3 (1-173)||(43226328-43226495)
chr3 (2-167)||(18162907-18163074)
chr3 (1-173)||(3314928-3315100)
chr3 (1-174)||(25687997-25688174)
chr3 (1-173)||(43421260-43421429)
chr3 (1-173)||(43423308-43423477)
chr3 (1-173)||(4308122-4308295)
chr3 (1-173)||(1313652-1313822)
chr3 (1-167)||(27101028-27101195)
chr3 (1-164)||(43228534-43228696)
chr3 (1-173)||(27635497-27635672)
chr3 (22-177)||(32263877-32264029)
chr3 (1-174)||(12267818-12267989)
chr3 (1-173)||(42990547-42990717)
chr3 (1-173)||(45883183-45883357)
chr3 (1-174)||(9604446-9604621)
chr3 (43-173)||(1321771-1321897)
chr3 (1-174)||(15781122-15781294)
chr3 (1-173)||(6484603-6484773)
chr3 (1-173)||(41849302-41849470)
chr3 (43-173)||(11168393-11168519)
chr3 (1-173)||(28181247-28181417)
chr3 (1-173)||(1626525-1626697)
chr3 (43-173)||(747050-747177)
chr3 (1-167)||(5926615-5926778)
chr3 (43-173)||(6065633-6065760)
chr3 (43-173)||(25533717-25533842)
chr3 (43-173)||(50494291-50494417)
chr3 (43-173)||(51726847-51726972)
chr3 (1-144)||(51943613-51943758)
chr3 (43-155)||(38890332-38890441)
chr3 (2-171)||(47701522-47701684)
chr3 (3-173)||(54691417-54691586)
chr3 (1-173)||(53468295-53468467)
chr3 (1-166)||(880302-880465)
chr3 (43-173)||(6063283-6063410)
chr3 (1-175)||(47148743-47148909)
chr3 (4-173)||(28101848-28102013)
chr3 (1-173)||(51674608-51674780)
chr3 (1-174)||(3307003-3307177)
chr3 (1-173)||(5886441-5886618)
chr3 (1-173)||(5899914-5900091)
chr3 (1-173)||(6232043-6232208)
chr3 (43-173)||(7606443-7606570)
chr3 (43-173)||(10955867-10955992)
chr3 (43-173)||(10958163-10958288)
chr3 (51-171)||(5191951-5192066)
chr3 (1-174)||(10191151-10191324)
chr3 (43-174)||(10084228-10084354)
chr3 (43-173)||(456200-456325)
chr3 (43-173)||(458577-458702)
chr3 (43-173)||(38210663-38210789)
chr3 (1-167)||(4666757-4666922)
chr3 (43-173)||(25389198-25389326)
chr3 (4-170)||(880087-880251)
chr3 (43-173)||(10621366-10621494)
chr3 (54-173)||(22114143-22114258)
chr3 (50-173)||(28761287-28761406)
chr3 (2-146)||(48361538-48361684)
chr3 (43-173)||(5522466-5522592)
chr3 (51-173)||(11170670-11170788)
chr3 (3-173)||(31151590-31151754)
chr3 (4-173)||(39715711-39715883)
chr3 (1-173)||(23633696-23633862)
chr3 (20-174)||(17795523-17795670)
chr3 (20-174)||(19103963-19104110)
chr3 (52-173)||(53591477-53591597)
chr3 (54-166)||(53893900-53894009)
chr3 (43-173)||(28412870-28412995)
chr3 (1-66)||(30006084-30006151)
chr3 (43-173)||(3859802-3859930)
chr3 (1-173)||(42992629-42992799)
chr3 (54-135)||(26720850-26720928)
chr3 (43-173)||(4103736-4103861)
chr3 (1-80)||(42992513-42992594)
chr3 (52-156)||(561640-561739)
chr3 (54-123)||(35919018-35919085)
chr3 (1-117)||(8183035-8183148)
chr3 (103-167)||(36957651-36957713)
chr3 (23-173)||(53597504-53597644)
chr3 (49-173)||(25634177-25634294)
chr3 (1-87)||(1674208-1674292)
chr3 (1-34)||(10612761-10612794)
chr3 (50-173)||(25635672-25635788)
chr3 (121-173)||(29897527-29897580)
chr3 (112-176)||(35917873-35917937)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-173)||(80133-80305)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-173)||(79460-79631)
[»] chr2 (50 HSPs)
chr2 (1-173)||(43623423-43623596)
chr2 (1-173)||(21520534-21520709)
chr2 (1-167)||(6258668-6258833)
chr2 (5-174)||(17849360-17849529)
chr2 (1-178)||(42923346-42923525)
chr2 (1-174)||(19007879-19008052)
chr2 (1-173)||(3022411-3022582)
chr2 (1-173)||(6263993-6264164)
chr2 (22-173)||(7462789-7462940)
chr2 (1-173)||(28196874-28197045)
chr2 (1-174)||(14837507-14837680)
chr2 (1-173)||(22287181-22287352)
chr2 (2-174)||(22162868-22163037)
chr2 (43-170)||(27105085-27105209)
chr2 (1-148)||(15539400-15539545)
chr2 (43-171)||(45279844-45279968)
chr2 (3-173)||(22707595-22707765)
chr2 (52-174)||(28459037-28459157)
chr2 (43-167)||(23452084-23452204)
chr2 (1-126)||(22407346-22407470)
chr2 (22-178)||(45238837-45238990)
chr2 (1-145)||(5375218-5375362)
chr2 (3-138)||(17848681-17848814)
chr2 (54-173)||(19501843-19501958)
chr2 (43-173)||(36558721-36558848)
chr2 (43-173)||(36560981-36561108)
chr2 (52-167)||(38020370-38020484)
chr2 (1-90)||(40031979-40032069)
chr2 (52-167)||(34979440-34979554)
chr2 (43-157)||(35217826-35217936)
chr2 (56-173)||(19504178-19504291)
chr2 (43-174)||(24162062-24162190)
chr2 (43-173)||(45332020-45332147)
chr2 (43-157)||(13909902-13910012)
chr2 (50-173)||(38414028-38414149)
chr2 (61-173)||(11739421-11739532)
chr2 (78-173)||(42453798-42453890)
chr2 (84-173)||(22874431-22874519)
chr2 (43-157)||(35215449-35215559)
chr2 (1-97)||(44288987-44289083)
chr2 (1-173)||(11577957-11578123)
chr2 (1-173)||(20146459-20146623)
chr2 (4-174)||(23871058-23871230)
chr2 (50-138)||(42064793-42064878)
chr2 (54-173)||(20592368-20592484)
chr2 (112-173)||(37962791-37962852)
chr2 (1-146)||(17897125-17897261)
chr2 (1-135)||(31732666-31732792)
chr2 (1-86)||(40699615-40699697)
chr2 (119-173)||(42923293-42923347)
[»] chr4 (89 HSPs)
chr4 (1-174)||(22800704-22800878)
chr4 (1-173)||(22802577-22802750)
chr4 (1-173)||(14789273-14789444)
chr4 (1-170)||(36919432-36919600)
chr4 (1-173)||(52942329-52942504)
chr4 (1-173)||(36921338-36921509)
chr4 (4-173)||(14787274-14787442)
chr4 (1-173)||(2891609-2891780)
chr4 (1-173)||(38928024-38928193)
chr4 (1-174)||(40637391-40637567)
chr4 (1-173)||(33415334-33415504)
chr4 (1-173)||(24889113-24889286)
chr4 (1-173)||(40091259-40091431)
chr4 (1-174)||(17662091-17662261)
chr4 (1-176)||(24879307-24879474)
chr4 (50-173)||(49088922-49089044)
chr4 (1-173)||(24446502-24446670)
chr4 (1-173)||(47563078-47563248)
chr4 (52-173)||(16453676-16453796)
chr4 (4-167)||(27499362-27499530)
chr4 (43-174)||(37089211-37089339)
chr4 (50-173)||(47868774-47868894)
chr4 (3-167)||(48486638-48486803)
chr4 (1-174)||(3824446-3824626)
chr4 (1-176)||(24880769-24880938)
chr4 (1-173)||(11437679-11437855)
chr4 (22-165)||(13547494-13547635)
chr4 (1-164)||(11435271-11435438)
chr4 (52-174)||(16455594-16455715)
chr4 (1-171)||(12395692-12395861)
chr4 (1-171)||(12400654-12400823)
chr4 (2-172)||(6133155-6133326)
chr4 (52-173)||(37312924-37313044)
chr4 (43-173)||(22782577-22782704)
chr4 (52-173)||(53405508-53405626)
chr4 (52-173)||(5101284-5101404)
chr4 (43-174)||(6765210-6765336)
chr4 (54-174)||(31849439-31849554)
chr4 (43-174)||(2484714-2484840)
chr4 (43-174)||(5635317-5635443)
chr4 (50-173)||(9148608-9148727)
chr4 (43-174)||(14633684-14633811)
chr4 (43-173)||(16931631-16931757)
chr4 (43-173)||(22780212-22780339)
chr4 (43-173)||(44599680-44599805)
chr4 (1-173)||(4215623-4215792)
chr4 (1-173)||(3937126-3937290)
chr4 (43-173)||(24348567-24348692)
chr4 (43-173)||(26085818-26085944)
chr4 (51-173)||(47210637-47210755)
chr4 (1-173)||(36378610-36378777)
chr4 (50-173)||(22046526-22046646)
chr4 (54-173)||(8631260-8631374)
chr4 (43-158)||(51015611-51015722)
chr4 (1-174)||(22044230-22044407)
chr4 (52-173)||(56030828-56030945)
chr4 (54-173)||(9176315-9176429)
chr4 (1-146)||(47275042-47275185)
chr4 (54-173)||(18409192-18409309)
chr4 (54-173)||(5198781-5198895)
chr4 (51-174)||(7941697-7941815)
chr4 (54-173)||(9173987-9174101)
chr4 (54-173)||(11006094-11006209)
chr4 (54-173)||(11008408-11008523)
chr4 (59-154)||(22132248-22132340)
chr4 (43-173)||(38409570-38409696)
chr4 (2-166)||(36380668-36380827)
chr4 (43-173)||(16933988-16934111)
chr4 (43-157)||(18847518-18847628)
chr4 (23-173)||(5664576-5664722)
chr4 (1-157)||(38890090-38890240)
chr4 (43-173)||(18709003-18709130)
chr4 (59-154)||(22134476-22134567)
chr4 (52-166)||(41997858-41997968)
chr4 (1-167)||(18534689-18534847)
chr4 (101-173)||(19096298-19096370)
chr4 (72-173)||(38269995-38270091)
chr4 (1-173)||(619298-619464)
chr4 (52-173)||(19323061-19323177)
chr4 (2-173)||(8756103-8756265)
chr4 (114-173)||(18311215-18311275)
chr4 (3-173)||(22295485-22295646)
chr4 (52-173)||(12102450-12102566)
chr4 (4-87)||(25357963-25358042)
chr4 (1-33)||(16455559-16455591)
chr4 (1-137)||(18537360-18537489)
chr4 (22-80)||(30136890-30136945)
chr4 (50-166)||(31983390-31983501)
chr4 (19-135)||(47150783-47150889)
[»] chr8 (50 HSPs)
chr8 (1-173)||(15073030-15073202)
chr8 (1-173)||(41382981-41383154)
chr8 (1-173)||(28251410-28251583)
chr8 (1-173)||(41385063-41385233)
chr8 (3-173)||(15068302-15068472)
chr8 (1-173)||(14808080-14808252)
chr8 (1-173)||(14419035-14419206)
chr8 (43-173)||(18811075-18811202)
chr8 (1-173)||(37214109-37214280)
chr8 (1-173)||(35872301-35872469)
chr8 (22-175)||(33541253-33541403)
chr8 (43-175)||(18813249-18813378)
chr8 (1-173)||(25952840-25953010)
chr8 (43-173)||(22684491-22684620)
chr8 (3-166)||(13858341-13858498)
chr8 (62-173)||(14477630-14477740)
chr8 (1-168)||(30480352-30480519)
chr8 (51-173)||(43530491-43530609)
chr8 (1-146)||(36865856-36866002)
chr8 (43-173)||(3874361-3874487)
chr8 (43-173)||(3883436-3883562)
chr8 (43-173)||(27827353-27827479)
chr8 (43-173)||(28283062-28283188)
chr8 (43-174)||(27829664-27829791)
chr8 (43-173)||(4424386-4424512)
chr8 (43-173)||(32339677-32339803)
chr8 (43-176)||(15809586-15809714)
chr8 (1-173)||(21482630-21482798)
chr8 (43-174)||(24873038-24873167)
chr8 (50-173)||(27911447-27911567)
chr8 (50-173)||(27957866-27957986)
chr8 (51-157)||(5372042-5372148)
chr8 (1-107)||(181798-181901)
chr8 (4-173)||(27106747-27106910)
chr8 (1-173)||(15185564-15185730)
chr8 (50-173)||(609110-609230)
chr8 (50-178)||(43082348-43082472)
chr8 (3-173)||(15956279-15956443)
chr8 (3-173)||(2467979-2468143)
chr8 (43-154)||(44721211-44721318)
chr8 (16-173)||(21480838-21480990)
chr8 (1-156)||(31162532-31162683)
chr8 (43-157)||(43079970-43080080)
chr8 (1-85)||(1225486-1225568)
chr8 (114-173)||(183251-183310)
chr8 (1-157)||(31578148-31578292)
chr8 (84-173)||(3005486-3005572)
chr8 (120-166)||(2467887-2467932)
chr8 (1-157)||(31035440-31035587)
chr8 (99-147)||(1225571-1225619)
[»] scaffold0005 (3 HSPs)
scaffold0005 (4-173)||(50289-50457)
scaffold0005 (4-173)||(52288-52456)
scaffold0005 (43-174)||(183481-183608)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-173)||(14231-14398)
scaffold0131 (127-167)||(15393-15433)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-171)||(35866-36037)
[»] scaffold0045 (1 HSPs)
scaffold0045 (22-171)||(85526-85671)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-172)||(11315-11489)
[»] scaffold0472 (1 HSPs)
scaffold0472 (43-173)||(6520-6646)
[»] scaffold0267 (1 HSPs)
scaffold0267 (54-173)||(357-473)
[»] scaffold0025 (1 HSPs)
scaffold0025 (43-174)||(69132-69259)
[»] scaffold1674 (1 HSPs)
scaffold1674 (43-167)||(1298-1418)
[»] scaffold0038 (1 HSPs)
scaffold0038 (45-173)||(41325-41448)
[»] scaffold0068 (1 HSPs)
scaffold0068 (50-174)||(29498-29617)
[»] scaffold0140 (2 HSPs)
scaffold0140 (54-173)||(24723-24839)
scaffold0140 (54-173)||(22448-22564)
[»] scaffold0127 (1 HSPs)
scaffold0127 (43-173)||(12715-12841)
[»] scaffold0370 (1 HSPs)
scaffold0370 (54-157)||(1309-1408)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-146)||(4267-4410)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-173)||(1493-1657)
[»] scaffold0891 (1 HSPs)
scaffold0891 (51-156)||(4535-4636)
[»] scaffold0250 (1 HSPs)
scaffold0250 (43-167)||(3200-3319)
[»] scaffold1899 (1 HSPs)
scaffold1899 (111-164)||(1-53)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-173)||(16501-16665)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 478
Target Start/End: Original strand, 5752096 - 5752355
Alignment:
Q  219 aagcttcattggatgctaggttccttagtgggttgaaggttgaaagagttgaagctgcaatggtctttaaatcaggtggttttggcgatatctttaccga 318  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||| || ||    
T  5752096 aagcttcattggatgctaggttccttagtgggttgaaggatgaaagagttgaggctgcaaaggtctttaaatcaggtggctttggcgatatcttgactga 5752195  T
Q  319 ccaacaagttgacaagaagcagttgattgatgatgttaggaaggctctttacgcagccaagatctgtggttacgcataagggatgaatctgatcagtgca 418  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||| |||||    
T  5752196 ccaacaagtagacaagaagcagttgattgatgatgttaggaaggctctttatgcagccaagatttgtagttacgcacaagggatgaatctgatccgtgca 5752295  T
Q  419 aagagcactgaaaagggatgggatttggcattgggtgaacttgcccgtatttggaaagga 478  Q
    |||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  5752296 aagagtgctgaaaagggttgggatttggaattgggtgaacttgcccgtatttggaaagga 5752355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13099490 - 13099317
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  13099490 ccgaactgggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg- 13099392  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  13099391 ttttggttgtttgacgatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 27306243 - 27306076
Alignment:
Q  4 aactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttg 103  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||    
T  27306243 aactgggtcaacaaattcttgtgttctctcttct-tttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttg-ttttg 27306146  T
Q  104 gttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| ||| |||| |||| ||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  27306145 gttgcttgactatcccttgttccacacatcaagtttgttattggtgtgatctctcatcgaattcgcaaca 27306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 21990423 - 21990571
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  21990423 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgtttgctacttttggcttgtgtttataattgttccatacactttga 21990520  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21990521 ttttggttgcctgattatcccttgctccacacatcaagtttattattggta 21990571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 9679336 - 9679495
Alignment:
Q  5 actgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    |||||||||||||||||||  ||||| |||||||| |||||||| | | ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  9679336 actgggtcaacaaattcttttgtgttatctcttcc-tttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacactttgatttt 9679433  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||    
T  9679434 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaa 9679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 26804784 - 26804955
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||  |||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |    
T  26804784 cgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacactttg-t 26804881  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||| ||||  |||||||||||||||| |||||||||||| |||||| ||||| |||||||||||    
T  26804882 tttggttgcttgactatcctttgctccacacatcaaatttgttattggtgtgatttctcatcaaattcgcaaca 26804955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11355531 - 11355705
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||| |  |||||||||| | | ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||     
T  11355531 ccgaactgggtcaacaaattcttttatgttctctcttacttctctctct-tgttgttttctacttttggcttgtgtttataattgttccatacactttgt 11355629  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||  ||||||||||||||||| ||| |||||||| ||| ||||||||||||||| |||||    
T  11355630 ttttggttgcctgattattccttgctccacacatcaaatttattattggtgtgattttttcatcgaattcccaaca 11355705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20626311 - 20626481
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||   |||||||| |||| |    
T  20626311 ccgaactgggtcaacaaattcttttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacacttt-a 20626407  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  20626408 ttttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20630202 - 20630372
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||   |||||||| |||| |    
T  20630202 ccgaactgggtcaacaaattcttttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacacttt-a 20630298  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  20630299 ttttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20642621 - 20642791
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||   |||||||| |||| |    
T  20642621 ccgaactgggtcaacaaattcttttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacacttt-a 20642717  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  20642718 ttttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21678339 - 21678506
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||| |||||||||||||||||||||||||  |||||| |||||||   |||||||||||||||||||||||||||||||| ||| ||||| ||    
T  21678339 ccgaactgggacaacaaattcttgtgttctctcttct-tttctcccgctgtt---ttctacttttggcttgtgtttataattgttccttacactttg-tt 21678433  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||  ||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  21678434 ttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgatttttcatcgaattcacaaca 21678506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31435062 - 31434892
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  31435062 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgtttataattgttccttacacttt-a 31434968  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    ||||| |||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  31434967 ttttgattgcttgattattccttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 42331013 - 42330845
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||| |   ||||||||||||   |||||||||||||||||||||||||||||||||||| |||||     
T  42331013 ccgaactgggtcaacaaattcttttgtgttctctctttc---tctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg- 42330921  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| ||||||||  |||||||||||||||||||| |||||||  |||||| ||||||||||||||||||    
T  42330920 ttttggttgcttgattatccattgctccacacatcaagtttattattggcgtgatttctcatcgaattcgcaacag 42330845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 21592159 - 21591986
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||      
T  21592159 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt-- 21592064  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaa 176  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| |   || ||| ||||||||||||||||||||    
T  21592063 ttttggttgtctgattatcacttgctccacacatcaagtttgttatagccgtgttttctcatcgaattcgcaacagaa 21591986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 44724852 - 44725022
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataat-tgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  44724852 ccgaactgggtcaacaaattcttttgtgttctctcttca-tttctctcg---ttgttttctacttttggcttgtgtttataatatgttccatacactttg 44724947  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| ||| |||| |||||||||||||||||||||||||||||| || |||  ||||||||||||||||    
T  44724948 -ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttcccatcgaattcgcaaca 44725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 443869 - 444044
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| || | |||||||||||||||||||||| |||||||||||| |||| |||||    
T  443869 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacactttg 443967  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaaca 173  Q
     |||||||||| ||| |||  |||||||||||||||||||||||||||||| |||  ||| ||||||||||| |||||    
T  443968 -ttttggttgcttgactattccttgctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 11759449 - 11759575
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  11759449 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 11759544  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  11759545 attggtgtgatttttcatcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 42223432 - 42223600
Alignment:
Q  2 cgaactgggtcaacaaattcttgtgttctctct-tccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||| |||| ||||| | | ||||||||    |||||||||||||||| ||||||||||||||||||  |||| |||| |||    
T  42223432 cgaactgggtcaacaaattcttttgttttctctcttcttttctctca---ttgttttctacttttgccttgtgtttataattgttttatacacttt-att 42223527  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||||| || ||||| |||||||||||||||    
T  42223528 ttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttttatcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 4295950 - 4295781
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||||  |||||||||||||| | ||||||||||     ||||||||||||||||||||||||| ||||||| |||| |||||     
T  4295950 ccgaactgggtgaacaaattcttttgtgttctctctt-cttttctctcgc---cattttctacttttggcttgtgtttattattgttctatacactttg- 4295856  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||| ||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4295855 ttttggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgatttttcatcgaatttgcaaca 4295781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 9681116 - 9681257
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||    
T  9681116 ttgtgttctctcttcc-tttctctctc-gatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcactt 9681213  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    | ||||||||||||||||||||||||| || ||| |||| ||||    
T  9681214 gttccacacatcaagtttgttattggtgtgttttctcattgaat 9681257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20297684 - 20297810
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20297684 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 20297779  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  20297780 attggtgtgatttttcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39146002 - 39145855
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||| |||||||||||||||||  ||||  ||||     
T  39146002 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttggtttgtgtttataattgtttaatacaatttg- 39145906  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  39145905 ttttggttgcttgattatcacttactccacacatcaagtttgttattggta 39145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22251601 - 22251455
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||||||  || |||||||||||||||||||||||||||||||||| ||||| |||||     
T  22251601 ccgaactgggtcaacaaattcttttgtgttctatcttcc-tttctctct-tgctgttttctacttttggcttgtgtttataattgtttcatacactttg- 22251505  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||||||||    
T  22251504 ttttggttgtttgattatcccttgctcaacacatcaagtttgttattggt 22251455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20299782 - 20299908
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20299782 tctcgcagttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 20299877  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||| ||||| |||||    
T  20299878 attggtgtgatttttcatcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 38394308 - 38394434
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  38394308 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 38394403  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  38394404 attggtgtgatttttcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 6 - 174
Target Start/End: Original strand, 21680308 - 21680473
Alignment:
Q  6 ctgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttg 103  Q
    |||||||||||||| ||| |  |||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  21680308 ctgggtcaacaaatacttttttgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttt 21680402  T
Q  104 gttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||| |||||||  |||||| ||||||||||| ||||||||||| ||  |||||||||||||| ||||||    
T  21680403 gttgcatgattattccttgcttcacacatcaagcttgttattggtgtgggttttcatcgaattcacaacag 21680473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 27832651 - 27832488
Alignment:
Q  3 gaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||| |||||||||||||||| |||||| | |||||||| |||||   |||||||||||| ||||| |||||| |  ||||||| ||||| ||||    
T  27832651 gaactgggtaaacaaattcttgtgttatctctttc-tttctctcactgtt---ttctacttttggtttgtgattataact--tccatacactttg-tttt 27832559  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| | ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27832558 ggttacttgattatttcctgctccacacattaagtttgttattggtatgatttttcatcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 7471940 - 7471821
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||     
T  7471940 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 7471845  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||| ||||||||||||    
T  7471844 tgatttttcattgaattcgcaaca 7471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 1606701 - 1606827
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  1606701 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgtt 1606796  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  1606797 attggtgtgatttttcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 28487882 - 28488000
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||     
T  28487882 gttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 28487977  T
Q  150 tgatttttcatcgaattcgcaac 172  Q
    |||||||||||||||||||||||    
T  28487978 tgatttttcatcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 48457975 - 48458100
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  48457975 tctcgccgttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 48458070  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  48458071 attggtgtga-ttttcatcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 40836759 - 40836583
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttct----ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||  ||| |    ||||| ||||||||||||||||||||||| ||||  |||||||||||| |    
T  40836759 ccgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgccgttgttttctacttttggcttgtattta--attgttccatacac 40836662  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc-atcgaattcgcaaca 173  Q
    |||| |||||||||  |||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  40836661 tttg-ttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgatcgaattcgcaaca 40836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 44886 - 45013
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  ||||||||||||||||||| |||    
T  44886 tctcgccgttgttttctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtt-gtt 44981  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||| ||||||||||||||||||    
T  44982 attggtgtgatttctcatcgaattcgcaacag 45013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 9027153 - 9027034
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||||     
T  9027153 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtg 9027058  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  9027057 tgatttttcatcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 3036046 - 3036166
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||  |||||    
T  3036046 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccaaacatcaa-attgtt 3036141  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    |||||| |||||| |||||||||||    
T  3036142 attggtgtgatttctcatcgaattc 3036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 37412141 - 37411982
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||| |||| ||||||||  |||||||| |||| |||  | || || ||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  37412141 ccgaactggatcaataaattcttttgtgttctcccttctcttcttttctctcgttgttttctagttttggcttgtgattataattgttccatacactttg 37412042  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc 158  Q
     |||||||||| |||||||  |||| ||||||||||||||||||||||||| ||| |||||    
T  37412041 -ttttggttgcttgattattccttgttccacacatcaagtttgttattggtgtgagttttc 37411982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 43253484 - 43253357
Alignment:
Q  43 tctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    ||||||||||||||| ||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||  ||||    
T  43253484 tctcgctgttgtttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaa-attgt 43253389  T
Q  142 tattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||| ||| |||||||||||||||||||||    
T  43253388 tattggtgtga-ttttcatcgaattcgcaacag 43253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 22137411 - 22137527
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||    
T  22137411 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgat 22137507  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  22137508 ttttcgtcgaattcacaaca 22137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 25542857 - 25542976
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  ||||||||||||  |||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||     
T  25542857 gttgttttctacttttggcttgtattta--attgttccatacattttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtg 25542952  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  25542953 tgatttttcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 28485894 - 28486013
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  ||||||||||||  |||| |||||||||| |||||||| ||||||||||| |||||| |||||||||||     
T  28485894 gttgttttctacttttggcttgtattta--attgttccatacattttg-ttttggttgcttgattatcccttgctccacatatcaag-ttgttattggtg 28485989  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  28485990 tgatttttcatcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 40552438 - 40552554
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||    
T  40552438 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgat 40552534  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  40552535 ttttcgtcgaattcacaaca 40552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7094427 - 7094301
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||||||||| || |||| ||||||||||| ||| |||  ||||||||||||||||||||||||    
T  7094427 tctcgccgttgttttctacttttgacttgtattta--attgttccacacacttt-attttggttgcttgactatgccttgctccacacatcaagtttgtt 7094331  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  7094330 attggtgtga-ttttcatcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24465810 - 24465975
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||| || |||||||| | |||||||||||| | ||||||||||||||   |||||||||||| ||||| |||||| |  ||||||| ||||| ||    
T  24465810 ccgaactgagtaaacaaatt-tcgtgttctctctttcttttctctcgctgtt---ttctacttttggtttgtgattataact--tccatacactttg-tt 24465902  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||| |||| |||||||||||| ||| |||||||| |||||||||||||||||| |||||    
T  24465903 ttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgatttttcatcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 1850308 - 1850429
Alignment:
Q  48 ctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattgg 147  Q
    ||||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  1850308 ctgttgttttctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 1850403  T
Q  148 tatgatttttcatcgaattcgcaaca 173  Q
    | ||||||   |||||||||||||||    
T  1850404 tgtgatttcaaatcgaattcgcaaca 1850429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 7469982 - 7469864
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||| ||||| |||||||| || |||||||||||||| || |||||||||     
T  7469982 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttagttgcttgattatccct-gctccacacatcaaatt-gttattggtg 7469888  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  7469887 tgatttttcatcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 40550161 - 40550277
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  40550161 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 40550257  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  40550258 ttttcgtcgaattcacaaca 40550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 2935590 - 2935719
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||| ||||||||||| ||||    
T  2935590 tctcgccgttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgcttcacacatcaag-ttgt 2935685  T
Q  142 tattggtatgatttttcatcgaattcgcaacagaa 176  Q
    ||||||| ||| |||||||||||||| ||||||||    
T  2935686 tattggtgtga-ttttcatcgaattcacaacagaa 2935719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 35959 - 36066
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||||| |||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |    
T  35959 ttgttttctacttttggtttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 36054  T
Q  151 gatttttcatcg 162  Q
    ||||| ||||||    
T  36055 gatttctcatcg 36066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 3878911 - 3879027
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||| |||| ||||  ||||||||||||  |||  |||||||||| ||||||||||||||||||||||||||| || |||||| | ||||    
T  3878911 ttttctacttttggtttgtattta--attgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaag-ttattattgatgtgat 3879007  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    || |||||||||||||||||    
T  3879008 ttctcatcgaattcgcaaca 3879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 7092172 - 7092054
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||| ||| | ||||  ||||||||| || |||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||| |    
T  7092172 ttgttttctacttttgacttatattta--attgttccacacacttt-attttggttgcttgactatcccttgctccacacatcaagtttgttattggtgt 7092076  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    || ||||||||||||| ||||||    
T  7092075 ga-ttttcatcgaatttgcaaca 7092054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24748868 - 24749035
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||  ||||||||||||||   ||||||||   |||||||||||||||| | ||||| ||||||   |||||||| |||||     
T  24748868 ccgaactgagtcaacaaattcttttgtgttctctctt-tatttctctc---gttgttttctactttt-gtttgtgattataa--cttccatacactttg- 24748959  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  24748960 ttttggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 38396972 - 38397084
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||||||| |||| ||||| |||||||||| | |||||| |||||||||||||||||| ||||||||||| |||     
T  38396972 ttttctacttttggcttgtattta--attgttctatacactttg-ttttggttgctttattatcccttgctccacacatcaag-ttgttattggtgtga- 38397066  T
Q  154 ttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||    
T  38397067 ttttcatcgaattcgcaa 38397084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 26295723 - 26295873
Alignment:
Q  3 gaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||| | |||||||||||||||| ||||||  |||||| ||   ||||||||||||||||||||||||||||||||  || ||||| ||||| ||||    
T  26295723 gaactggataaacaaattcttgtgttatctctt-tctttctttc---gttgttttctacttttggcttgtgtttataat--tttcatacactttg-tttt 26295815  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatc 161  Q
    | |||| |||||||| | ||||||| ||||||||| | |||||||| ||||||||||||    
T  26295816 gattgcttgattatcacgtgctccatacatcaagtat-ttattggtgtgatttttcatc 26295873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7351618 - 7351491
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| ||||| |||||||||| | |||||| ||| |||||||||||||| |||||    
T  7351618 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttaattatcccttactccacacatcaag-ttgtt 7351523  T
Q  143 attggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||| |||||    
T  7351522 attggtgtgattttttcatcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 18345863 - 18345955
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  18345863 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtt 18345955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24813513 - 24813348
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||   |||||||||||||||| | || |||||||||||||| |   | | |||||    
T  24813513 ccgaactgggtaaacaaattttgtgtgttctctcttccttttctctc---gttgttttctactttt-gtttatgtttataattgttac---cacgttgat 24813421  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| |||||||  ||||||||||||||||||| | |||||| | ||| ||||||||||| || |||||    
T  24813420 attggttgcttgattattacttgctccacacatcaagtattttattgatgtga-ttttcatcgaactcacaaca 24813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 22393999 - 22394161
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||||||| |||||||||||  |||||||||||| | |||||||||   ||||||||||||||||| ||||| |||||| |  ||||||| ||||| |||    
T  22393999 aactgggtaaacaaattcttttgtgttctctctttc-tttctctcg---ttgttttctacttttggtttgtgattataact--tccatacactttg-ttt 22394091  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||  ||| |||| |||||||||||  |||||||| ||||||||   |||||||||||||||| |||||    
T  22394092 tggttgtttgactatcacttgctccaca--tcaagtttattattggtggaatttttcatcgaattcacaaca 22394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 1046831 - 1046757
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  1046831 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttttcttcgaattcgcaaca 1046757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 1049203 - 1049129
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg-atttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||    
T  1049203 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgaatttttcttcgaattcgcaaca 1049129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 22108401 - 22108483
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  22108401 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 22108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7349243 - 7349117
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| |||||||||||||| ||||||| | |  ||||| |||| ||||||||||| | |||||| ||| |||||||||||||| |||||    
T  7349243 tctcgccgttgtttt-tacttttggcttgtatttataacttt--catacacttt-attttggttgcttaattatcccttactccacacatcaag-ttgtt 7349149  T
Q  143 attggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||| |||||    
T  7349148 attggtgtgattttttcatcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 40946663 - 40946777
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||| ||||||||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||| | |||     
T  40946663 ttttctatttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattgatgtga- 40946757  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    || ||||||||||| |||||    
T  40946758 ttctcatcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 7188861 - 7188979
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| ||||||||||||| |  ||||||| ||||| |||||||||| |||||||  ||||||||||||||||||| | |||||| | ||    
T  7188861 tgttttctacttttg-cttgtgtttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttattgatgtg 7188956  T
Q  152 a-tttttcatcgaattcgcaaca 173  Q
    | ||||| ||||||||| |||||    
T  7188957 attttttgatcgaattcacaaca 7188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 20137066 - 20136991
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||| ||| ||||| ||||||| |||||||||||||| |||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattttttcatcgaattcacaaca 20136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25276403 - 25276569
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| | |||||||||||  ||||||||||||   |||||||||   |||||||||||||||  ||||||||||  ||||||  || | ||||||    
T  25276403 ccgaactggttaaacaaattcttttgtgttctctctttt-tttctctcg---ttgttttctactttttacttgtgttta--attgtt--atccactttga 25276494  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaa 176  Q
    | |||||||| |||||| ||  || ||||||||||||||| ||||||||| |||||||| | ||||||| ||||||||    
T  25276495 tattggttgcttgattaact--tgatccacacatcaagtt-gttattggtgtgattttttagcgaattcacaacagaa 25276569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 31153740 - 31153691
Alignment:
Q  123 ctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31153740 ctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 31153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 1502883 - 1502816
Alignment:
Q  104 gttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||    
T  1502883 gttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20137125 - 20137061
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttgg 67  Q
    |||||||||||||||||||||  |||||||||||||| | ||||||||||   ||||||||||||||||    
T  20137125 ccgaactgggtcaacaaattcttttgtgttctctctt-cttttctctcgc---tgttttctacttttgg 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 25357324 - 25357352
Alignment:
Q  120 ttgctccacacatcaagtttgttattggt 148  Q
    |||||||||||||||||||||||||||||    
T  25357324 ttgctccacacatcaagtttgttattggt 25357352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 39462782 - 39462956
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  39462782 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttga 39462881  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39462882 ttttgattgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28207086 - 28206912
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28207086 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 28206987  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  28206986 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 27336958 - 27336799
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27336958 ccgaactgggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 27336859  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc 158  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  27336858 ttttggttgcctgattatcccttgctccacacatcaagtttgttattgatgtgatttttc 27336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 50307564 - 50307389
Alignment:
Q  1 ccgaactgggtcaacaaattctt---gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||   ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50307564 ccgaactgggtcaacaaattctttttgtgttctctcttatttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg 50307465  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  50307464 attttggttgcctgattatcccttgctccagacatcaagtttattattggtgtgatttttcatcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 27339149 - 27338990
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27339149 ccgaactaggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 27339050  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc 158  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  27339049 ttttggttgcctgattatcccttgttccacacatcaagtttgttattgatgtgatttttc 27338990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14097987 - 14097815
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  14097987 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacactttga 14097890  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||    
T  14097889 ttttggttgcttgattatctcttgcttcacacatcaagtttgttattggtgtgttttttcttcgaattcgcaaca 14097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47906533 - 47906704
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  47906533 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg- 47906630  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  47906631 gtttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2949250 - 2949079
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||| |    
T  2949250 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt-a 2949154  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2949153 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 6995718 - 6995540
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccc-----tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    ||||||| |||||||||||||  ||||||||||||||| |     ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  6995718 ccgaactaggtcaacaaattcttttgtgttctctcttctcttctttttctctcgctgttgttttctacttttggcttgtgtttatagttgttccatacac 6995619  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||||| |||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6995618 tttg-ttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12302523 - 12302348
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  12302523 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacactttga 12302426  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg--atttttcatcgaattcgcaacag 174  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| ||   ||||| ||||||||||||||||    
T  12302425 ttttggtttcctgattatcacttgctccacacatcaagtttgttattggtgtgtttttttttatcgaattcgcaacag 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23816149 - 23816323
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttc--cctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||||  ||||||||||||   | |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  23816149 ccgaactgggtcaacaaattcttttgtgttctctctttttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacacttt 23816248  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    | |||||||||| |||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23816249 g-ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 25251292 - 25251127
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||| ||||| |||||     
T  25251292 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttggcttgtgattataattgtttcatacactttg- 25251196  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25251195 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 25251127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 15823809 - 15823968
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||| |||| | |||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  15823809 ccgaactgggtcaacaaattcttttgtgttctctcttcttttttctcttgttgttgttttctacttttgccttgtgattataattgttccatacactttg 15823908  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||    
T  15823909 attttggttgcctgattaccccttactccacacatcaagtttgttattggtgtgattttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41647183 - 41647355
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||  || ||||||||||||||| ||||||||||||||| || ||||| ||||||    
T  41647183 ccgaactgggtcaacaaattctcttgtgttctctcttcc-tttctctct-tgctgttttctacttttgacttgtgtttataattatttcatacactttga 41647280  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||| |||||    
T  41647281 ttttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11457493 - 11457327
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||| ||||||||||||  |||||     
T  11457493 ccgaacttggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttaaaattgttccatatactttg- 11457397  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcg 168  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11457396 ttttggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtgatttttcatcgaattcg 11457327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 50078787 - 50078635
Alignment:
Q  22 ttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctct 120  Q
    |||| ||||||||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||  ||    
T  50078787 ttgttttctctcttctttttctctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattcct 50078689  T
Q  121 tgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  50078688 tgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 50248588 - 50248416
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||||||  |||||||||||||| |||||||| | ||||||||| |||||||||||||| ||||||||||||||||| |||||     
T  50248588 ccgaattgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttcaacttttggcttgtggttataattgttccatacactttg- 50248492  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||| ||| ||||||||||||| |||||||||||| |||||| ||||||||||| ||||||    
T  50248491 ttttggttgcttgattatcccttactccacacatcaaatttgttattggtgtgatttatcatcgaattcacaacag 50248416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 4131384 - 4131221
Alignment:
Q  10 gtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttg 107  Q
    ||||||||||||||  ||||||||| |||  |||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||    
T  4131384 gtcaacaaattcttttgtgttctctgttct-tttctctctc-gttgttttctatttttggcttgtgtttataattgttccatacactttg-ttttggttg 4131288  T
Q  108 cctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    | ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  4131287 cttgattatctcttgctccgcacatcaagtttgttattggtgtgagtttttcatcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18839851 - 18840022
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||| |||||||||||||||||||||||||||||| |||||     
T  18839851 ccgaactgggtcaacaaattctttcgtgttctctcttct-tttctctctc-gctgttttctagttttggcttgtgtttataattgttccatacactttg- 18839947  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||| | || | |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18839948 tttcgattacttgattattccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 18840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28998271 - 28998094
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||||  |||  | || || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  28998271 ccgaactgggtcaacaaattcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg 28998172  T
Q  98 at--tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| || |||||||| |||||    
T  28998171 attctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgttttctcttcgaattcacaaca 28998094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 29003987 - 29003810
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||||  |||  | || || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  29003987 ccgaactgggtcaacaaattcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg 29003888  T
Q  98 at--tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| || |||||||| |||||    
T  29003887 attctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgttttctcttcgaattcacaaca 29003810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 3579550 - 3579431
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacacttt-attttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 3579452  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||||||||||||||| |||||    
T  3579451 -tttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13215349 - 13215518
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  13215349 ccgaactgcgtcaacaaattcttttgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg-tt 13215445  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||  ||| |||| ||||||||||||||||||||| |||||||| || ||| ||| ||||||| |||||    
T  13215446 ttggttgtttgactatcccttgctccacacatcaagtttattattggtgtgttttctcaacgaattcacaaca 13215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18307372 - 18307543
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||| | ||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||     
T  18307372 ccgaacggagtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg- 18307468  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||| | |  ||| |||||||||||||||||    
T  18307469 ttttggttgcctaattatcatttgctccacacatcaagtttgttattgatgtattttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 31490226 - 31490345
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||    
T  31490226 tgttttctacttttgacttgtgtttataattgtttcatacacttt-attttggttgcttgattatctcttgctccacacatcaagtttg-tattggtgtg 31490323  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||    
T  31490324 atttttcatcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10399797 - 10399669
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  10399797 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgtt 10399701  T
Q  143 attggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||| |||| ||||||||||||||||||||    
T  10399700 attggtgtgatattttcatcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 47451922 - 47452065
Alignment:
Q  29 ctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccac 128  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| ||||||| ||    
T  47451922 ctctcttccttttctctcgttgttgctttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctcgac 47452020  T
Q  129 acatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||| | ||||||||||| |||||| |||||    
T  47452021 acatcaaatttgttattgatgtgatttttcattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31425033 - 31424862
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||||||| ||||||||||||||||| ||||||  ||||     
T  31425033 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttgacttgtgtttataattgtcccatacattttg- 31424937  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    || ||||||| ||| |||  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  31424936 ttatggttgcttgagtattccttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaaca 31424862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 46431674 - 46431548
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| |||    
T  46431674 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttg-ttttggttgcttgattatctcttgctccaaacatcaagtt-gtt 46431579  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  46431578 attggtgtgatttttcatcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16429221 - 16429387
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||||||  |||||||||||||  ||||||||||||||   ||| |||||||| |||||||||||| |  ||||||| |||||     
T  16429221 ccgaattgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttc-acttttggtttgtgtttataact--tccatacactttg- 16429312  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  16429313 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 38925499 - 38925328
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||  ||||||||    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  38925499 ccgaactgagtcaacaaattcttttgtgttctctcttct-tttctctca---ttgttttctacttttggcttgtgtttataaatgttccatacactttga 38925404  T
Q  99 -ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||||||||||||| ||| ||||||||||||||||| |||||||| || ||| ||||| ||||| |||||    
T  38925403 tttttggttgcctgattatcacttactccacacatcaagtttattattggtgtgttttctcatcaaattcacaaca 38925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 2617825 - 2617955
Alignment:
Q  39 tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||| |    
T  2617825 tttctctcgctgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaag-t 2617921  T
Q  139 tgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||  ||||||||||||||||||||    
T  2617922 tgttattggtgtg-gttttcatcgaattcgcaaca 2617955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13447291 - 13447117
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccct----ttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||  |    || |||||| ||||||||||||||||||||||| ||||  |||||||||||| |    
T  13447291 ccgaactgggtcaacaaattcttttgtgttcttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtattta--attgttccatacac 13447194  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  13447193 tttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 9241103 - 9240940
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||  ||||||||||| |  |||||||||| | ||||||||||||||   |||||||||||| |||| |||||||||||| ||||| |||||     
T  9241103 ccgaactggggaaacaaattcttttttgttctctctttc-tttctctcgctgtt---ttctacttttggtttgtatttataattgtttcatacactttg- 9241009  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  9241008 ttttggttgcttgattatcacttgctccacacttcaagtttgttattggtgtgattttttatcgaattc 9240940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 16226480 - 16226607
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  16226480 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 16226576  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  16226577 attggtgtgatttttcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 17319150 - 17319321
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | | ||||||||||||||||||||||||||| | |||||||| |||||     
T  17319150 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctattttctacttttggcttgtgtttataactattccatacactttg- 17319246  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||||||  ||| ||||||||||||| ||||||||||||  ||||||||||||||||| |||||    
T  17319247 ttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgatttttcatcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20291768 - 20291894
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| | |||||||||||| | ||||||||||||||||||||||||||| |||||    
T  20291768 tctcgccgttgttttctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccacacatcaag-ttgtt 20291864  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  20291865 attggtgtga-ttttcatcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 47177674 - 47177801
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  47177674 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 47177770  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| ||||||||| |||||    
T  47177771 attggtgtgatttttgatcgaattcacaaca 47177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 15294803 - 15294676
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  15294803 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 15294708  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| ||| ||||||||||| ||||||||||    
T  15294707 attggtgtga-ttttcatcgaaatcgcaacaga 15294676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 16231875 - 16232004
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  16231875 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatccgttgctccacacatcaag-ttgtt 16231971  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| |||||||||||||||||| |||||||    
T  16231972 attggtgtgatttttcatcgaattcacaacaga 16232004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 39932398 - 39932515
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  39932398 ttttctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgat 39932494  T
Q  154 ttttcatcgaattcgcaacag 174  Q
    |||||||||||||| ||||||    
T  39932495 ttttcatcgaattcacaacag 39932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20302753 - 20302879
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| | |||||||||||| | |||||||||||||||||| |||||||| |||||    
T  20302753 tctcgccgttgttttctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccagacatcaag-ttgtt 20302849  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  20302850 attggtgtga-ttttcatcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 47180025 - 47180152
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||||||||| |||| | |||||| |||||||||||||||||| |||||    
T  47180025 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttgattttgattgcttaattatcccttgctccacacatcaag-ttgtt 47180121  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| ||||||||| |||||    
T  47180122 attggtgtgatttttgatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 51750351 - 51750476
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  51750351 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 51750446  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||    
T  51750447 attggtgtgattttt-atcgaattcgcaaca 51750476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25248569 - 25248398
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttcc-ctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||  ||||||| | ||||||  | ||||||||   ||||||||||||||| ||| |||||||||||||| ||||| |||||    
T  25248569 ccgaactgggtcaacaaattcttttgtgttttatcttccggtgtctctcgc---tgttttctacttttgacttttgtttataattgtttcatacactttg 25248473  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| ||| |||  ||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  25248472 -ttttggttgcttgactattccttactccacacatcaagtttgttattgttgtgatttttcatcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 9459403 - 9459275
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  9459403 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 9459308  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| |||||||||||||||||| |||||||    
T  9459307 attggtgtgatttttcatcgaattcacaacaga 9459275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 9463230 - 9463102
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  9463230 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 9463135  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| |||||||||||||||||| |||||||    
T  9463134 attggtgtgatttttcatcgaattcacaacaga 9463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 13762148 - 13762275
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  13762148 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccctttctccacacatcaag-ttgtt 13762243  T
Q  143 attggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||| ||||||| |||||||||||||||||    
T  13762244 attggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 23786151 - 23786278
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||| ||||    
T  23786151 tctcgccgttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgt 23786246  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  23786247 tattggtgtgatttttcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 25860382 - 25860278
Alignment:
Q  39 tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    ||| |||| ||||||||||||||||||||    
T  25860382 tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggt----tgactatcccttgctccacacatcaagtt 25860288  T
Q  139 tgttattggt 148  Q
    || |||||||    
T  25860287 tgatattggt 25860278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 31735490 - 31735365
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  31735490 tctcgccgttgttttcta-ttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 31735396  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| | |||| |||||||||||||||||    
T  31735395 attggtgtaatttctcatcgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 40134231 - 40134379
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctc-- 119  Q
    ||||||||||| |||  |||||||||   ||||||||||||||||||||| | |||||| |  ||||||| ||||| |||||||||||||||||| ||      
T  40134231 ttgtgttctctattctttttctctcg---ttgttttctacttttggcttgagattataact--tccatacactttg-ttttggttgcctgattatatcac 40134324  T
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  40134325 ttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacag 40134379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17324327 - 17324483
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctt-------tctctcgctgt---tgttttctacttttggcttgtgtttataattgttccata 90  Q
    ||||||| ||||||||||||||||||||||||||||| ||       |||||| || |   ||||||||||||||||||||||||||||||| || ||||    
T  17324327 ccgaactaggtcaacaaattcttgtgttctctcttcctttctctctctctctctctctcactgttttctacttttggcttgtgtttataattttttcata 17324426  T
Q  91 cgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    | ||||| || ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  17324427 cactttg-ttatggttgcttgattattccttgctccacacatcaagtttgttattggt 17324483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 13358885 - 13359011
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| ||| |||| ||| |||||||||||||| |||||    
T  13358885 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgactatcccttactccacacatcaag-ttgtt 13358981  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  13358982 attggtgtga-ttttcatcgaattcgcaaca 13359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 31422827 - 31422706
Alignment:
Q  52 tgttttctacttttggcttgtgttt-ataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||| ||||||||| |||||| |||| ||| |||| ||||| ||||  |||||||  |||||||||||||||||||||||||||| | |    
T  31422827 tgttttctacttttgacttgtgttttataattattccgtacacttt-attttagttgattgattattccttgctccacacatcaagtttgttattgatgt 31422729  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||    
T  31422728 gatttttcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15916655 - 15916822
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | || |||||||||| | ||| ||||||||||  ||||||||||||||||||||||||||   |||||||| ||||| |    
T  15916655 ccgaactgggtaaacaaattttgtgcgttctctctttctttt-tctcgctgtt--tttctacttttggcttgtgtttataa--cttccatacactttg-t 15916748  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||| ||||| |  ||||||||||||||||||| | |||||||| ||| |||||||||||||| ||||||    
T  15916749 tttggttgcttgattgttacttgctccacacatcaagtat-ttattggtgtgacttttcatcgaattcacaacag 15916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 30780361 - 30780483
Alignment:
Q  53 gttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccaca--catcaagtttgttattggtat 150  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||||| |||||||||| |||||||  ||| |||||||  ||||||||||||||||||| |    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttg-ttttggttgcttgattattccttactccacacacatcaagtttgttattggtgt 30780459  T
Q  151 gatttttcatcgaattcgcaacag 174  Q
    || |||||||||||||| ||||||    
T  30780460 gagttttcatcgaattcacaacag 30780483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 17324654 - 17324484
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgct-gttgttttctacttt-tggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||  ||||||||||||||| |||  | || || | ||||||||||||| |||||| || |||||||||||| || | ||||    
T  17324654 ccgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctctcgctgttttctactttctggcttatgattataattgttctattcacttt 17324555  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattc 167  Q
    | || ||| ||| ||| |||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||    
T  17324554 g-ttatggctgcttgactatcccttactccacacatcaagtttgttattggtgtgagtttttcatcgaattc 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 51757862 - 51757973
Alignment:
Q  58 ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    ||||||||||||||| || |  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||||    
T  51757862 ctacttttggcttgtattca--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcattttt 51757957  T
Q  158 catcgaattcgcaaca 173  Q
    |||||||||| |||||    
T  51757958 catcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 28842806 - 28842931
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  28842806 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgtt 28842901  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    ||| || ||| ||||||||||||||||||||    
T  28842902 attagtgtga-ttttcatcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17186145 - 17185979
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| ||||| |||||||||||  |||||||||||| | ||||||||||||||   |||||||||||  ||||| |||||| |  ||||||| |||||     
T  17186145 ccgaattgggtaaacaaattcttttgtgttctctctttc-tttctctcgctgtt---ttctacttttgt-ttgtgattataact--tccatacactttg- 17186054  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||| |||||    
T  17186053 ttttggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatttttcatcaaattcacaaca 17185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 50076690 - 50076563
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   |||||||||||||||  |||||||||||||||||||||||| |||||     
T  50076690 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcg---ttgttttctacttttaacttgtgtttataattgttccatacactttg- 50076595  T
Q  99 ttttggttgcctgattatctcttgctccacac 130  Q
    |||| ||||| | |||||   |||||||||||    
T  50076594 ttttagttgctttattattcattgctccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 25128136 - 25128301
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcc---ctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||||||  ||||||||||||||   |||||||||||||||   ||||||||||   ||||| ||||||||| |  || | |||    
T  25128136 ccgaactgggtcaacaaattcttttgtgttctctcttcctttctttctctcgctgtt---ttctacttttat-ttgtgattataattgct--atccactt 25128229  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||||||||| |||||||  ||||||| ||||||||||||||||||||   ||| ||||||| ||||||    
T  25128230 tgattttggttgcttgattattccttgctctacacatcaagtttgttattgacgtgagttttcattgaattc 25128301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 24325982 - 24326101
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||| ||| |||| ||||| ||||  |||||||||||| |||| | ||||||||| |||||||| ||| |||||||||||||||| |||||||||     
T  24325982 gttgttttttacctttgacttgtattta--attgttccatacacttt-actttggttgcttgattatcccttactccacacatcaagtt-gttattggtg 24326077  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  24326078 tgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16428917 - 16429043
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||  ||||||||| ||||   |||||||||||| |||||||||||| |  || |||| |||||     
T  16428917 ccgaactgagtcaacaaattcttttgtgttctctcttct-tttctctcgatgtt---ttctacttttggtttgtgtttataact--tctatacactttg- 16429009  T
Q  99 ttttggttgcctgattatctcttgctccacacat 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  16429010 ttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 16432705 - 16432813
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||| || ||||||||| | |  ||||| || || ||||| ||||||||||||  ||||||||||||||||| |||||||||||| ||||    
T  16432705 ttttctacttttggtttatgtttataacttt--catacactgtg-ttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgat 16432801  T
Q  154 ttttcatcgaat 165  Q
    ||||||||||||    
T  16432802 ttttcatcgaat 16432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 2510311 - 2510202
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||| ||||| ||||  |||||||||||| ||||| |||| ||||| ||||||||||||||| |||| |||||| |||||    
T  2510311 tctcgccgttgttttctatttttgacttgttttta--attgttccatacactttg-ttttcgttgcttgattatctcttgcttcacatatcaag-ttgtt 2510216  T
Q  143 attggtatgatttt 156  Q
    |||||| |||||||    
T  2510215 attggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 8349068 - 8348905
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||     ||||||||||||||||  |||||||||||| |  ||||||| |||||      
T  8349068 ccgaactgggtaaacaaattttgtgtgttctctctttc-tttctctaa---ttgttttctacttttgt-ttgtgtttataact--tccatacactttg-- 8348978  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||  |||| ||||||| |||||||| |||||||| |||||||||||||||||| |||||    
T  8348977 tttggttgcttgattattacttgttccacacgtcaagttt-ttattggtgtgatttttcatcgaattcacaaca 8348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6115120 - 6114959
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||| ||  |||||||||||||  |||||||||   |||| ||||||||||| ||||| ||||||| |  |||||||  ||| |    
T  6115120 ccgaactgggtaaacaaattattttgtgttctctcttct-tttctctcg---ttgtcttctacttttgacttgtatttataact--tccatacatttt-a 6115028  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| |||||||| ||| ||||||||||||||| | |||  ||| ||||||||||| ||||||    
T  6115027 ttttggttgcttgattatcactttctccacacatcaagtatattaccggtgtgatttttcattgaattc 6114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 14183573 - 14183455
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||| |||||| ||||||||||||| |  ||||||| ||||| |||||||||| |||||||  |||||| |||||||||||| | ||||||||     
T  14183573 gttgttttcttcttttg-cttgtgtttataact--tccatacactttg-ttttggttgcttgattattacttgcttcacacatcaagtattttattggtg 14183478  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||||||||| |||||    
T  14183477 tgattttt-atcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 28840991 - 28841083
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| ||||| |||||||||| |||||||| |||||||||| |||||||||    
T  28840991 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccactcatcaagtt 28841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 18800542 - 18800429
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||||||||||   |||||||| ||||| ||||| |||| |||||||   |||||| ||||||||||| | || |||||     
T  18800542 gttgttttctacttttggcttgtgtttataa--cttccatacactttg-ttttgattgcttgattattatttgctctacacatcaagtattttgttggtg 18800446  T
Q  150 tgatttttcatcgaattc 167  Q
    ||| ||||||||||||||    
T  18800445 tga-ttttcatcgaattc 18800429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13125474 - 13125310
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||| ||| |||||||| | |||||||||||||  ||||||||||   |||||||||||||||| ||||||||||||| |||  |  ||   ||| |    
T  13125474 ccgaactaggtaaacaaatttcatgtgttctctcttttctttctctcg---ttgttttctacttttg-cttgtgtttataactgtcacccac---ttg-t 13125383  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||||||| | ||||||||||||||||||   |||||||| |||||||| | |||||||||||||    
T  13125382 tttggttgcttgattattt-ttgctccacacatcaagtaatttattggtgtgatttttgaacgaattcgcaaca 13125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6756791 - 6756877
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccat 89  Q
    ||||||||| ||||||||||||| |  |||||||||||  || |||||||||||   ||||||||||| ||||||||||||||||||||||    
T  6756791 ccgaactggatcaacaaattcttttctgttctctcttct-ttcctctcgctgtt---ttctacttttgacttgtgtttataattgttccat 6756877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 51752696 - 51752805
Alignment:
Q  58 ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    ||||||||||||||| || |  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||| ||| || |||||||| ||| ||||    
T  51752696 ctacttttggcttgtattca--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacat-aag-ttattattggtgtga-tttt 51752789  T
Q  158 catcgaattcgcaaca 173  Q
    |||||||||| |||||    
T  51752790 catcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 30790402 - 30790250
Alignment:
Q  16 aaattcttgtgttctctcttccctttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgatt 114  Q
    |||||| ||||| ||||||| | |||||||||||||  |||| ||| |||||  |||||||||||| |  ||||||| ||||| |||||||||| |||||    
T  30790402 aaattcgtgtgtgctctctttc-tttctctcgctgtctttttactatttttgt-ttgtgtttataact--tccatacactttg-ttttggttgcttgatt 30790308  T
Q  115 atctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||| ||||||||| || | |||||||| ||||||| |||||||||| |||||    
T  30790307 attacttgcttcacacatcaggtattttattggtgtgatttt-catcgaattcacaaca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 26520134 - 26520061
Alignment:
Q  4 aactgggtcaacaaat-tcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttata 79  Q
    |||||||| ||||||| || ||||||||||||| | ||||||||||||||   |||||||||| |||||||||||||    
T  26520134 aactgggtaaacaaatatcgtgtgttctctctttcttttctctcgctgtt---ttctacttttagcttgtgtttata 26520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16561732 - 16561878
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||||| || |||||||| | ||||||||||||| | |||||||||| |||   ||||||||||| |||||||||||||||||||    | | |||||    
T  16561732 ccgaactgtgtaaacaaatttcgtgtgttctctctttc-tttctctcgccgtt---ttctacttttg-cttgtgtttataattgttc---tcacgttgat 16561823  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt 156  Q
     |||||||| ||||||  | || ||||||||||||||| | |||||||| |||||||    
T  16561824 attggttgcttgatta--tttttctccacacatcaagtattttattggtgtgatttt 16561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 6e-69; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 9020224 - 9020398
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  9020224 ccgaactgggtcaacaaattcttttgtgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacactttg 9020323  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9020324 -ttttggttgtctgattatctcttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 3233739 - 3233567
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||    
T  3233739 gaactgggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgatt 3233640  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| | || ||| |||||||||||||||||    
T  3233639 ttggttgcctgattatcacttactccacacatcaaatttgttattgatgtgttttctcatcgaattcgcaaca 3233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11983045 - 11982872
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  11983045 ccgaactgggtcaacaaattcttttgtgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttg 11982946  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  11982945 -ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3631955 - 3631784
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||| |||||||| ||| |||| | | |||||||||||||||||||||||||||||||||||||||| |||||     
T  3631955 ccgaactgggtcaacaaattcttttgtgttatctcttcctttt-tctctc-gatgttttctacttttggcttgtgtttataattgttccatacactttg- 3631859  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  3631858 ttttggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtgttttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 15346645 - 15346806
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||   ||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  15346645 ccgaactgggtaaacaaatttcgtgtgttctctctttc-tttctct---tgttgttttctacttttggcttgtgtttataattgttccatatactttg-t 15346739  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  15346740 tttggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgatttttcatcgaatt 15346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15367330 - 15367498
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||||   |  |||||||||||||||||||||||||||||||||||||| ||||| |    
T  15367330 ccgaactgggtaaacaaattttgtgtgttctctctttc-tttctctcg---tatttttctacttttggcttgtgtttataattgttccatacactttg-t 15367424  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  15367425 tttggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3629881 - 3629711
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  3629881 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctactttttggcttgtgtttataattgttccatacactttg 3629786  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| ||||||||  ||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  3629785 -ttttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 24338417 - 24338295
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |     
T  24338417 gttgttttctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctccacacatcaagtttgttattgatg 24338319  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  24338318 tgatttttcatcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 30728837 - 30728673
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||| | | ||||||||||||||| ||||| |||||||||||||||||| ||||| |||    
T  30728837 aactgggtcaacaaattcttttgtgttatctcttcc-tttctctctc-gctgttttctacttttgacttgtatttataattgttccatacactttg-ttt 30728741  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgc 169  Q
    ||||||  ||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  30728740 tggttgtttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcaacgaattcgc 30728673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 15530167 - 15530003
Alignment:
Q  11 tcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcct 110  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||  |||||| ||| ||    
T  15530167 tcaataaattcttgtgttctctcttctttttctct-gctgttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtct 15530069  T
Q  111 gattatctcttgctccacacatcaagtttgttattggtatga---tttttcatcgaattcgcaaca 173  Q
    ||||||  ||| |||||||||||||||||||||||||| |||   ||| ||||||||||| |||||    
T  15530068 gattattccttactccacacatcaagtttgttattggtgtgagtttttctcatcgaattcacaaca 15530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26065279 - 26065457
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt--tct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||| ||  ||||||||| |||  ||  ||| || |||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  26065279 ccgaactgggtcaacaaattattttgtgttctctattcttttgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctt 26065378  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||||||||||| |||||||  ||||||||||| |||||    
T  26065379 tgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26085248 - 26085426
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt--tct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||| ||  ||||||||| |||  ||  ||| || |||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  26085248 ccgaactgggtcaacaaattattttgtgttctctattcttttgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctt 26085347  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||||||||||| |||||||  ||||||||||| |||||    
T  26085348 tgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 33311472 - 33311601
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  33311472 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 33311568  T
Q  143 attggtatgatttttcatcgaattcgcaacagaa 176  Q
    |||||| ||| |||||||||||||| ||||||||    
T  33311569 attggtgtga-ttttcatcgaattcacaacagaa 33311601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 3394716 - 3394837
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||  || |||||||||||||| || |||||||| ||    
T  3394716 tgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtg 3394815  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||| |||||||||||||||||    
T  3394816 ttttctcatcgaattcgcaaca 3394837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 2628853 - 2628727
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  2628853 tctcgccgttgttttctacttttggcttgtatttataact--tccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 2628757  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  2628756 attggtgtga-ttttcatcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 12195481 - 12195354
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  12195481 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 12195385  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  12195384 attggtgtgatttttcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 33309203 - 33309329
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  33309203 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 33309299  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  33309300 attggtgtga-ttttcatcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 14458727 - 14458607
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||  || ||||||||||||||  | ||||||||     
T  14458727 gttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatccattactccacacatcaag-ctattattggtg 14458631  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  14458630 tgatttttcatcgaattcgcaaca 14458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 29754676 - 29754547
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| |||| || ||||  |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||    
T  29754676 tctcgcagttgttttctactttttggctcgtattta--attgttccatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgt 29754581  T
Q  142 tattggtatgatttttcatcgaattcgcaacaga 175  Q
    ||||||| |||||||||||||||||| |||||||    
T  29754580 tattggtgtgatttttcatcgaattcacaacaga 29754547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 26066088 - 26065961
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||    
T  26066088 tctcgcagttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaagtt-gt 26065993  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  26065992 tattggtgtgatttttcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 26068362 - 26068235
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||    
T  26068362 tctcgcagttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaagtt-gt 26068267  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  26068266 tattggtgtgatttttcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 28241286 - 28241163
Alignment:
Q  45 tcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttat 144  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  28241286 tcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttgattgcttgattatctcttgctccacacatcaag-ttgttat 28241191  T
Q  145 tggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||| |||||||||||||| |||||    
T  28241190 tggtgtga-ttttcatcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 1069734 - 1069562
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||  ||||||||||||| |  |||||||||||  |||||||| | | |||||||||||||| ||||||||||||||||||||||||| |||||     
T  1069734 ccgaactgaatcaacaaattcttttatgttctctcttct-tttctctctc-gctgttttctactttttgcttgtgtttataattgttccatacactttg- 1069638  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||| |||| ||| |||| ||||||||| ||||| | ||||||||||||||  ||| ||||||||||| ||||||    
T  1069637 ttttgattgcttgactatcccttgctccatacatcgaatttgttattggtatattttctcatcgaattcacaacag 1069562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 5273183 - 5273055
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||| || |  | ||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  5273183 tctcgccgttgttttctacttttggcttgtatttaaaaat--tacatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 5273087  T
Q  143 attggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||| |||||    
T  5273086 attggtgtgattttttcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 14507143 - 14507018
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  14507143 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 14507048  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| | ||||||||||| ||||||    
T  14507047 attggtgtga-tattcatcgaatttgcaaca 14507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 1230216 - 1230090
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| |||||||||||| ||| | |||||||| ||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |||||    
T  1230216 tctcgccgttgttttatacttttggctt-tgtatttaattgtttcatacacttt-attttggttgcttgattatctcttgatccacacatcaag-ttgtt 1230120  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||    
T  1230119 attggtgtgattttt-atcgaattcgcaaca 1230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13057493 - 13057659
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||| | |||||||  |||||   |||||||||||  ||||| ||||||||||| |  ||  ||| |    
T  13057493 ccgaactcggtcaacaaattcttttgtgttctctctttcttttctctatctgtt---ttctacttttgt-ttgtgattataattgttgcccac--tttta 13057586  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13057587 tt--ggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 19704521 - 19704402
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgatttt-ggttgcctgattatctcttgctccacacatcaagtttgttattggtatga 152  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||| |||    
T  19704521 ttttctacttttggcttgtattta--attgttccatacactttgatttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 19704425  T
Q  153 tttttc-atcgaattcgcaacag 174  Q
    ||| || ||||||||| ||||||    
T  19704424 tttctcgatcgaattcacaacag 19704402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 14466622 - 14466785
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||| ||||||||  ||||||||||||| | |||||||||||| |||||||||||||||  ||||| |||||| | |  |||||  ||||     
T  14466622 ccgaactgggtcagcaaattctcttgtgttctctctttc-tttctctcgctgctgttttctacttttgt-ttgtgattataacttt--catacattttg- 14466716  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| ||| |||| |||||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  14466717 ttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgatttttcatcgaattc 14466785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32280295 - 32280463
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||| |||||||  ||||||||||||||| ||||||||  |||| ||||||||||||||||||| |||||||||||| |  ||   |||     
T  32280295 ccgaacttggtcaaaaaattctcttgtgttctctcttcc-tttctctca-tgttattttctacttttggcttgtatttataattgttacccac---ttg- 32280388  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    | |||||||| |||||||| ||| ||||| ||||||||||||||||| || |||||||| ||||||||| |||||    
T  32280389 tattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattttttatcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 22490921 - 22491073
Alignment:
Q  9 ggtcaacaaattcttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttg 107  Q
    ||||||||||||||| ||| ||||||   |||||| || || ||||||||||||||||||| | |||||||||||||| |  ||   ||| |||||||||    
T  22490921 ggtcaacaaattcttttgtgctctct---ctttctttctctcgttgttttctacttttggcctatgtttataattgttacccac---ttg-ttttggttg 22491013  T
Q  108 cctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    | ||||||||  | ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  22491014 cttgattatccttagctccacacattaagtttgttattggtgtgatttttcatcgaattc 22491073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 30967548 - 30967673
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||| | ||||| |||||||| | ||||||||||||||||||||||||||| |||||    
T  30967548 tctcgccgttgttttctacttttgacttgtattta--attattccatgcactttg-ttttggttacttgattatctcttgctccacacatcaag-ttgtt 30967643  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||| |||||||||||||    
T  30967644 attggtgtga-ttttcaacgaattcgcaaca 30967673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 4816186 - 4816070
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  4816186 ttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 4816091  T
Q  154 ttttcatcgaattcgcaacag 174  Q
    |||| |||  |||| ||||||    
T  4816090 ttttgatcagattcacaacag 4816070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 15541154 - 15540990
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  ||||||||||||   |||||||| | ||||||||||| |||||  ||||| |||||| |||| |  ||   ||| ||    
T  15541154 gaactgggtcaacaaattcttttgtgttctctcttt--tttctctctc-gttgttttctaattttgt-ttgtgattataactgttaccaac---ttg-tt 15541063  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| | ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  15541062 ttggtttcttgactatcccttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaaca 15540990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 26932518 - 26932403
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||| |||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  26932518 ttttctacctttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 26932423  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||||||| ||||| |||||    
T  26932422 ttttcatcaaattcacaaca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 8717268 - 8717195
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 18322493 - 18322566
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  18322493 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatagaattcgcaaca 18322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 22611023 - 22611139
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||| ||||||||||||||||||||   | ||||||| |||||||| ||||||| |  ||||||||||||||||| | |||||||| |    
T  22611023 ttgttttctacttttg-cttgtgtttataattgttcc---cactttgatattggttgcttgattattt--tgctccacacatcaagtattttattggtgt 22611116  T
Q  151 gatttttcatcgaattcgcaacag 174  Q
    || ||||||||||| |||||||||    
T  22611117 ga-ttttcatcgaactcgcaacag 22611139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 25480227 - 25480346
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| |||||| ||||||||||| ||||| |||| |||||||||||  || |||| ||| ||| ||||||||| | | |||||||| ||    
T  25480227 tgttttctacttttgacttgtgattataattgtttcatacacttt-attttggttgctcgactatcccttactctacacatcaaatat-ttattggtgtg 25480324  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| |||||    
T  25480325 atttttcatcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25465606 - 25465444
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||||||   | | |||||    
T  25465606 ccgaactgggtaaacaaattttgtgtgttctctctttc-tttctctcgctgtt---ttctacttttg-cttgagtttataattgttcc---cacgttgat 25465515  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| ||||||  | |||||||| ||||||||| | |||||||| ||| |||||||||||||| |||||    
T  25465514 attggttgcttgatta--ttttgctccatacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 25465444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 13040179 - 13040232
Alignment:
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13040179 ttgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaaca 13040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 30034562 - 30034447
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||| |||||| |||||||   || ||||| |||||  ||||||||| |||||||| ||||||||| |||||||| ||||||||||| |    
T  30034562 ttgttttctacttttagcttgtatttataa--ctttcatacactttg--tttggttgcttgattatc-cttgctccatacatcaag-ttgttattggtgt 30034469  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    || ||||||||||||||||||||    
T  30034468 ga-ttttcatcgaattcgcaaca 30034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||||||| |||  |||| |||| ||||| |||||||||| |||||||   |||||||||||||||||| | |||||| | ||||    
T  17012387 ttttctacttttggcttgtgttt-taac-gttc-atacactttg-ttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgat 17012482  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||||||||||||| |||||    
T  17012483 ttttcatcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26945444 - 26945600
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||| ||||||||| | ||||||||||||||   |||||||||||||||||||||||||   |||| ||| |||||      
T  26945444 ccgaactgggtaaacaaatttcgtgtcttctctctttcttttctctcgctgtt---ttctacttttggcttgtgtttataa--cttccttacactttg-- 26945536  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcga 163  Q
    |||| ||   |||||||  |||| | |||| ||||||| | |||||||| ||||||||||||||    
T  26945537 tttgattctttgattattacttgtttcacatatcaagtgttttattggtgtgatttttcatcga 26945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12186087 - 12186000
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccata 90  Q
    ||||||||||| |||||||| ||  |||||||||||| | ||||||||||||||   ||||||||||  |||||||||||||||||||||||    
T  12186087 ccgaactgggtaaacaaattattttgtgttctctctttc-tttctctcgctgtt---ttctactttttccttgtgtttataattgttccata 12186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 53 - 173
Target Start/End: Complemental strand, 16455394 - 16455280
Alignment:
Q  53 gttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga 152  Q
    ||||||||||||||  |||||||||||||| ||||   | | ||||| |||||||| |||||| || |||||||||| ||||||| | |||||||| |||    
T  16455394 gttttctacttttgt-ttgtgtttataatttttcc---cacgttgatattggttgcttgatta-ct-ttgctccacatatcaagtattttattggtttga 16455301  T
Q  153 tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| |||||    
T  16455300 tttttcatcgaattcacaaca 16455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28078210 - 28078063
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||| |||| |||||||| | |||||||||| || | ||||||||||||||    |||||||||| ||||||||||||||| ||||   | | |||||    
T  28078210 ccgaacagggtaaacaaatttcgtgtgttctctttttc-tttctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgat 28078120  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
     |||||||| ||||||| | |||||||||||||||||| | |||||||| ||||||||    
T  28078119 attggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 28078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3027867 - 3027703
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||| | |||||||| | ||||||||||||| | |||||||||   |||||||||||||||| ||||| |||||||   |||||||| ||||       
T  3027867 ccgaactggataaacaaatttcgtgtgttctctctttc-tttctctcg---ttgttttctacttttgacttgtatttataa--cttccatacacttt--a 3027776  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  ||||||  ||||||||||||||||| | | |||| ||| ||||||||||| |||||| |||||    
T  3027775 tttggttgctcgattattacttgctccacacatcaaatat-ttatcggtgtgatttttcattgaattcacaaca 3027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 20915312 - 20915213
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||| || ||||| ||||| |||||||||| |||||| | ||||| |||||||||||| || |||||||| ||||    
T  20915312 ttttctacttttggcttgtattta--attatttcatacactttg-ttttggttgcttgattaccccttgccccacacatcaag-ttattattggtgtgat 20915217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 10584358 - 10584413
Alignment:
Q  119 cttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  10584358 cttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13040053 - 13040117
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttg 66  Q
    |||||||||||||||||||||  |||||||||||||| | ||||||||   |||||||||||||||||    
T  13040053 ccgaactgggtcaacaaattcttttgtgttctctctttcttttctctc---gttgttttctacttttg 13040117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19696740 - 19696887
Alignment:
Q  1 ccgaactgggtcaacaaa-ttcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||| ||| |||||||||||||  ||||||||||||||  |||||||||||| | |||||||||||| |||  ||  | ||||| |    
T  19696740 ccgaactgggtaaacaaatttcgtgtgttctctctt-tctttctctcgctgt--ttttctactttt-gtttgtgtttataactgt--cacccactttg-t 19696832  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt 156  Q
    || |||||| |||||| || |||||||||||||||||| | |||||||| |||||||    
T  19696833 ttcggttgcttgatta-ct-ttgctccacacatcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 12937208 - 12937126
Alignment:
Q  2 cgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc 87  Q
    ||||| |||| |||||||| | |||||||| |||| | |||||||||   |||||||||||||||| ||||||||||||||||||||    
T  12937208 cgaaccgggtaaacaaattttgtgtgttctatctttcttttctctcg---ttgttttctacttttg-cttgtgtttataattgttcc 12937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 28037630 - 28037576
Alignment:
Q  120 ttgctccacacatcaagt-ttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| || |||||||| |||||||||| ||||||| |||||    
T  28037630 ttgctccacacatcaagtatttttattggtgtgatttttcaacgaattcacaaca 28037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 6610478 - 6610378
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||| |||||||| ||| ||||||||||||||  || | ||||| |||||||||| ||||||| |  |||||||||||| |||| | ||||||||     
T  6610478 gttgttttatacttttg-cttatgtttataattgtt--atccactttg-ttttggttgcttgattattt--tgctccacacattaagtattttattggtg 6610385  T
Q  150 tgatttt 156  Q
    |||||||    
T  6610384 tgatttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 1e-67; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 36402343 - 36402170
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||    
T  36402343 cgaactaggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgat 36402244  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36402243 tttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 2818351 - 2818186
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2818351 ccgaacttggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 2818252  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||    
T  2818251 ttttggatgcctgattatcccttgctccatacatcaagtttgttattggtgtg-tttttcatcgaat 2818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 39854746 - 39854923
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||| |||||||||||||||  |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||     
T  39854746 ccgaactaggtcaacaaattcttttgtgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacacttta 39854845  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
     |||||||||| | | |||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  39854846 tttttggttgcttaactatcccttgctccacatatcaagtttattattggtgtgatttttcatcgaattcgcaacaga 39854923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6745331 - 6745507
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg- 97  Q
    |||||||||||||||||||||||  |||||||||  | | |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||     
T  6745331 ccgaactgggtcaacaaattcttttgtgttctcttattcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgt 6745430  T
Q  98 -attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
      |||||| ||| ||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  6745431 ttttttggctgcttgactatctcttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 6745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6747567 - 6747743
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt--t 96  Q
    |||||||||||||||||||||||  |||||||||  | | |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |    
T  6747567 ccgaactgggtcaacaaattcttttgtgttctcttcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgt 6747666  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    | |||||||||| |||||||||||||||| |||||||||||||||||||||| || ||| ||||| |||||||||||    
T  6747667 gtttttggttgcttgattatctcttgctctacacatcaagtttgttattggtgtgttttctcatccaattcgcaaca 6747743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18511228 - 18511056
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||     
T  18511228 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttg- 18511131  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  18511130 ttttagttgcttgactatcccttgctccacacatcaagtttgttattgatgtgatttatcatcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 41585702 - 41585580
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||     
T  41585702 gttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgccccacacatcaagtttgttattggtg 41585604  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  41585603 tgatttttcatcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2724156 - 2724328
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||| ||| || ||||||||   |||||||||||||||||||||||||||||||||||| |||||    
T  2724156 ccgaactgggtcaacaaattcttttgtgttctctcttcctttttctttcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg 2724252  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
     |||||||||| |||||||| ||||||  |||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  2724253 -ttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgattttttcatcaaattcgcaaca 2724328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 17818508 - 17818340
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||| |||| |||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  17818508 ccgaactgggtcaacaaattcttttgtgttctcttttcc-tttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg 17818410  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattc 167  Q
     |||||||||| |||||||  |||||||||||||||||||||||||||||| || |||| |||||||||||    
T  17818409 -ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattc 17818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24127119 - 24127291
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||| | |||||||| | ||||||||||||||||| ||| |||||||||||||| ||||| |||||     
T  24127119 ccgaactgggtcaacaaattcttttgtgttctctctttc-tttctctctc-gttgttttctacttttgacttatgtttataattgtttcatacactttgt 24127216  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||| ||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||| |||||    
T  24127217 tttttgttgtctgattatcccttgctccacacattaagtttgttatttgtgtgatttttcatcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31466005 - 31465833
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||||||||||||||| |||  |||||||||  |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  31466005 ccgaactaggtcaacaaattcttttgtattctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttga 31465908  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | |||||  |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  31465907 ttttggttgcttaattattccttgttccacacatcaaatttgttattggtgtgatttttcatcaaattcgcaaca 31465833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16776420 - 16776580
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctc--tcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||||  ||||||||  |||||  |||||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||    
T  16776420 ccgaactgggtcaacaaattcttttgtgttctcgctcttctttttctctcgctgttgttttctacttttggcttgtatt-ataattgtttcatacacttt 16776518  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttca 159  Q
    | ||||| ||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  16776519 g-ttttgattgcctgattattccttgctccacacatcaagtttgttattggtgtgatttttca 16776580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20505859 - 20505687
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  ||||||||||||||   ||||||||   ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20505859 ccgaactgggtcaacaaattcttttgtgttctctctt-attttctctc---gttgttttctagttttggcttgtgtttataattgttccatacactttga 20505764  T
Q  99 --ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
      ||||||||||||||||||  |||||||||||||||||||||||||||||| || ||| |||| |||||| |||||    
T  20505763 ttttttggttgcctgattattacttgctccacacatcaagtttgttattggtgtgttttctcattgaattcacaaca 20505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26098304 - 26098129
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||| |||||||||||||| |  |||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  26098304 ccgaactgagtcaacaaattcttttatgttctctcttcc-tttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg 26098206  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaaca 173  Q
     |||||||||| |||||||  |||||||||||||||||||||| ||||||| |||  ||| |||||||||||||||||    
T  26098205 -ttttggttgcttgattattccttgctccacacatcaagtttgatattggtgtgagttttctcatcgaattcgcaaca 26098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 658372 - 658203
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||| ||||||   ||||||||||||||| ||||||| |||||||| ||| |||||     
T  658372 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctcttgctgtt---ttctacttttggcttatgtttattattgttccgtacactttg- 658278  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  658277 ttttggttgcctgattattccttgctccacacatcaaatttgttattggtgtga-ttttcatcgaattcgcaacag 658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 34530679 - 34530559
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||| ||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttg-ttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtg 34530581  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| |||||    
T  34530580 atttttcatcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 3373104 - 3372977
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  3373104 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 3373008  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  3373007 attggtgtgatttttcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6756755 - 6756926
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||| ||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||||||||| ||||| |||||     
T  6756755 ccgaactgagtcaacaaaatcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgtttcatacactttg- 6756851  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaag-tttgttattggtatgatttttcatcgaattcgcaac 172  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||| || ||| ||||||||||||||||    
T  6756852 ttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgtgttttctcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 18469321 - 18469448
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  18469321 tctcgccgttgttttctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgtt 18469417  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||| |||||    
T  18469418 attggtatgatttttcatcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36208839 - 36209007
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgtt-ctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| ||||||||||| |||| ||||||| | |||||||||   ||||||||||||||||||||||| |||||||||||| |||| ||||| |    
T  36208839 ccgaactgggtaaacaaattcttttgtttctctctttc-tttctctcg---ttgttttctacttttggcttgtgattataattgttctatacactttg-t 36208933  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||| ||||||| ||||||||||||| |||||| | |||||||||||||||||| |||||    
T  36208934 tttggttgcttgattatcacttgctctacacatcaagtttattattgatgtgatttttcatcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40221786 - 40221956
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct-tccctttctctcgctgt-----tgttttctacttttggcttgtgtttataattgttccatacgct 94  Q
    |||||||||||||||||||| || ||| |||||| | |||||||||| || |     |||||||||||||||||||||||||||||||||||||||| ||    
T  40221786 ccgaactgggtcaacaaattattttgtgctctctcttcctttctctctctctctcgctgttttctacttttggcttgtgtttataattgttccatacact 40221885  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    ||| |||||||||| ||| ||||  ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  40221886 ttg-ttttggttgcttgactatcctttgctccacacatcaagtttgttattggtgtgatttttcatcaaatt 40221956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18596909 - 18597079
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||| ||||||  ||||||  ||||||  ||||||||||||||   ||||||||||| |||||||||||||||||||||||| ||||     
T  18596909 ccgaactgggtcaacagattcttttgtgttcgactcttct-tttctctcgctgtt---ttctacttttgacttgtgtttataattgttccatacacttt- 18597003  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| || ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  18597004 attttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtgatttttcatcgaatttgcaaca 18597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 21289024 - 21289187
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||| |||| ||||| |  ||  |||| | ||||||||||||||||||||||||||||| ||| |||||||| ||||| ||    
T  21289024 ccgaactgggtcaacaaattcttttgttttctct-cttttgttctctc-gttgttttctacttttggcttgtgtttattattcttccatacactttg-tt 21289120  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||| ||| |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21289121 ttggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgatttttcatcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 37705796 - 37705626
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||| | | ||||||||||||||||||||||||| ||||| |||||||  ||||| ||    
T  37705796 ccgaactaggtcaacaaattcttgcgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttttaattattccatatactttg-tt 37705700  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||| || ||||  |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  37705699 ttggttgcttggttattccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1189623 - 1189454
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |  |||||||||||||||||||||||||||||||||||||||  ||||     
T  1189623 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gcagttttctacttttggcttgtgtttataattgttccatacattttg- 1189527  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| || |||||||  |||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||    
T  1189526 ttttggtggcttgattattccttgctccacacatcaagtttgatattggtgtg--ttttcatcgaattcacaaca 1189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 2954679 - 2954843
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgttt-ataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||   ||||||||||||||||||||  ||||||||||||||| |||||    
T  2954679 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgttacataattgttccatacactttg 2954774  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
     ||||||||| ||||||||| ||| ||||||||||||| |||||||||||| || ||| |||||||||||    
T  2954775 -ttttggttgtctgattatcacttactccacacatcaaatttgttattggtgtgttttctcatcgaattc 2954843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 21948291 - 21948464
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttcccttt---ctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||  |||||||||||||| ||    ||||| || | | |||||||||||||||||||||||||||||||||||||| ||||    
T  21948291 gaactgggtcaacaaattcttttgtgttctctcttcctttctccctctctctcgctattttctacttttggcttgtgtttataattgttccatacacttt 21948390  T
Q  97 gatttt-ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgc 169  Q
      |||| |||||| |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  21948391 attttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgc 21948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 34477020 - 34476894
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  34477020 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 34476924  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  34476923 attggtgtga-ttttcatcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 38882400 - 38882528
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  38882400 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 38882495  T
Q  143 attggtatgatttttcatcgaattcgcaacagaa 176  Q
    |||||| ||| |||||||||||||||||||||||    
T  38882496 attggtgtga-ttttcatcgaattcgcaacagaa 38882528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 696141 - 696310
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||| || |||  |||||   |||||| || |||||||||||||||||||  |||||||||||| |||||||||| |||| |||    
T  696141 ccgaactgggtcaacaaattattttgtgttctct---ctttctttctctgttgttttctacttttgt-ttgtgtttataactgttccatacacttt-att 696235  T
Q  101 ttgg-ttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||| || | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  696236 ttggttttcttgattatctcttgctccacacatcaagtctgttattggtatgattttctcatcgaattcacaaca 696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10529065 - 10528937
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  10529065 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatcccttgcttcacacatcaag-ttgtt 10528969  T
Q  143 attggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||| ||||||| ||||||||||| |||||    
T  10528968 attggtgtgattttctcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18509334 - 18509201
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  18509334 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg- 18509237  T
Q  99 ttttggttgcctgattatctcttgctccacacatca 134  Q
    |||||||||  ||| |||| ||||||||||||||||    
T  18509236 ttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17073147 - 17073296
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtg--ttctctc-ttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||||||||||||||||| ||  ||||||| ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  17073147 ccgaactgggtcaacaaattcttttgctttctctctttatttttctctcgctgttgttttctacttttgacttgtgtttataattgttccatacactttg 17073246  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
     |||| ||||| |||| ||| ||||||||||||||||| ||| ||||||||    
T  17073247 -ttttagttgcttgatcatcacttgctccacacatcaaatttattattggt 17073296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20043253 - 20043397
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||||||  |||||||||||| | ||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||     
T  20043253 ccgaactgggtaaacaaattcttttgtgttctctctttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg- 20043348  T
Q  99 ttttggttgcctga-ttatctcttgctccacacatcaagtttgttattg 146  Q
    |||||| ||| ||| ||||| ||||||||||| ||||||||||||||||    
T  20043349 ttttggctgcttgatttatcacttgctccacaaatcaagtttgttattg 20043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 25804336 - 25804463
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  25804336 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 25804431  T
Q  143 attggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||| |||| |||||||||||| |||||||    
T  25804432 attggtgtgatattttcatcgaatacgcaaca 25804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10474339 - 10474176
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| | | |  ||||||||||| ||||||||||||||||||||||||| |||||     
T  10474339 ccgaactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctaatttctacttttcgcttgtgtttataattgttccatacactttg- 10474243  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    |||||||| | |||||||  ||||||||||||||||||||| |||||| | | ||||||||||||||    
T  10474242 ttttggttacttgattattccttgctccacacatcaagtttattattgatgtaatttttcatcgaat 10474176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 10750011 - 10750137
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  10750011 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 10750107  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||| ||||||||| |||||    
T  10750108 attggtgtga-ttttgatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 10757487 - 10757613
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  10757487 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 10757583  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||| ||||||||| |||||    
T  10757584 attggtgtga-ttttgatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 18466996 - 18467123
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||| ||||| ||||| |||| |||||||| ||||||||||||||||||||||||    
T  18466996 tctcgccgttgttttctacttttggcttgtatttataact--tccatacactttg-ttttgattgcttgattatcccttgctccacacatcaagtttgtt 18467092  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    ||| || |||||||||||||||||| |||||    
T  18467093 attagtgtgatttttcatcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 34479385 - 34479259
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||  ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  34479385 tctcgccgttgttttctacttttggcttgcattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 34479289  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||| |||||||||||    
T  34479288 attggtgtga-ttttcatcaaattcgcaaca 34479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26097994 - 26098127
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| || | | |||||||||||||||||| ||||||||||||||||||||| |||||     
T  26097994 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctatctc-gctgttttctacttttggctagtgtttataattgttccatacactttg- 26098090  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaa 135  Q
    |||||||||| ||| |||| |||||||||||||||||    
T  26098091 ttttggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 38960091 - 38959971
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||||     
T  38960091 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtg 38959996  T
Q  150 tgatttttcatcgaattcgcaacag 174  Q
    |||||||||||||||||||||||||    
T  38959995 tgatttttcatcgaattcgcaacag 38959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 39798342 - 39798468
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| ||||||||||||||||| || |||    
T  39798342 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaaatt-gtt 39798437  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  39798438 attggtgtgatttttcatcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 20045298 - 20045395
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  20045298 gttgttttttacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 12555880 - 12555757
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||| |||||||  ||||||||||||||||| ||||||||||||     
T  12555880 gttgttttctacttttggcttgtgattataattgtttcatacacttt-attttggttgcttgattattccttgctccacacatcaaatttgttattggtg 12555782  T
Q  150 tga--tttttcatcgaattcgcaac 172  Q
    |||  ||| ||||||||||| ||||    
T  12555781 tgagttttctcatcgaattcacaac 12555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 27912848 - 27912969
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||||||    
T  27912848 tctcgccgttgttttctacttttagcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttactccacacatcaagtttgtt 27912944  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    ||||||  |||||||||||||||||    
T  27912945 attggtgggatttttcatcgaattc 27912969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 23741813 - 23741693
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  23741813 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 23741717  T
Q  154 ttttcatcgaattcgcaacagaac 177  Q
    ||||| |||||||| |||||||||    
T  23741716 ttttcgtcgaattcacaacagaac 23741693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 10587127 - 10587252
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  10587127 tctcgccgttgttttctacttttgacttgtatttataact--tccatacactttg-ttttggttgcttgattatc-cttgctccacacatcaagtttgtt 10587222  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  10587223 attggtgtga-ttttcatcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25904366 - 25904536
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||| ||  |||||||||||||| |||||||| | | |||||||||||||||| ||||||||||||||||||||||| |||||     
T  25904366 ccgaactaggtcaacaaattattttgtgttctctcttcc-tttctctctc-gctgttttctacttttggtttgtgtttataattgttccatacactttg- 25904462  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||  |||| ||| |||| ||||| ||||||||||| ||| ||| |||| || ||| |||||||||||||||||    
T  25904463 ttttcattgcttgactatcccttgcaccacacatcaaatttatta-tggtgtgttttctcatcgaattcgcaaca 25904536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 27910745 - 27910872
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| ||||||| |||||| ||||||| |  ||||||| |||| ||||||||||  |||||||| ||||||||||||||||| ||||||    
T  27910745 tctcgccgttgttttatacttttagcttgtatttataact--tccatacacttt-attttggttgattgattatcccttgctccacacatcaaatttgtt 27910841  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  27910842 attggtgtgatttttcatcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 16092213 - 16092045
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||| |||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||| ||||| ||||||||||||  |||||  |    
T  16092213 gaactggatcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgcgtttacaattgttccatatactttg--t 16092118  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| ||||  |||||||||| ||||||||||||||||||  | ||| ||||||||||| |||||    
T  16092117 ttggttgcttgactatccattgctccacatatcaagtttgttattggtgcgttttctcatcgaattcacaaca 16092045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 21684412 - 21684293
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||| | ||||  |||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||     
T  21684412 gttgttttctacttttggcttttattta--attgttccatacactttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtg 21684317  T
Q  150 tgatttttcatcgaattcgcaacag 174  Q
    ||| |||||||||||||||||||||    
T  21684316 tga-ttttcatcgaattcgcaacag 21684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31179387 - 31179213
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttct-ctcttccct---ttct-ctcgctgttgtt-ttctacttttggcttgtgtttataattgttccatacgct 94  Q
    ||||||||||||||||||||  |||||||| ||||||  |   |||| ||||| |||||| ||||||||||||||||||||||  ||| |||||||| ||    
T  31179387 ccgaactgggtcaacaaatttctgtgttcttctcttctttgtgttcttctcgccgttgttcttctacttttggcttgtgttta--attattccatacact 31179290  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||| |||||||||| | |||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||    
T  31179289 ttg-ttttggttgcttaattatcccttgctccatacatcaagtt-gttattggtgtgatttttcatcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 4236947 - 4237065
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||     
T  4236947 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgcttcacacatcaag-ttgttattggtg 4237042  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||| |||||| ||||||| |||||    
T  4237043 tga-ttttcaacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 15354530 - 15354414
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  15354530 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 15354434  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  15354433 ttttcgtcgaattcacaaca 15354414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 15356806 - 15356690
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  15356806 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 15356710  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  15356709 ttttcgtcgaattcacaaca 15356690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 23665368 - 23665484
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  23665368 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 23665464  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  23665465 ttttcgtcgaattcacaaca 23665484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 23793219 - 23793103
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  23793219 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 23793123  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  23793122 ttttcgtcgaattcacaaca 23793103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 25921440 - 25921333
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  25921440 tctcgccgttgttttctacttttggcttgtattta--attgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaag-ttgtt 25921345  T
Q  143 attggtatgatt 154  Q
    |||||| |||||    
T  25921344 attggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 2175213 - 2175341
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  2175213 tctcgccgttgttttctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 2175308  T
Q  143 attggtatga--tttttcatcgaattcgcaaca 173  Q
    |||||| |||  ||||| ||||||||| |||||    
T  2175309 attggtgtgacttttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 4410343 - 4410458
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||||||||| ||||||| |  ||||||| | ||  |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||    
T  4410343 tgttttctacttttggcttgtatttataact--tccatacacctt--ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 4410437  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    | |||||| |||||||||||||    
T  4410438 a-ttttcaacgaattcgcaaca 4410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 31543047 - 31543153
Alignment:
Q  44 ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtta 143  Q
    ||||| ||||||||||||||||||||||| |||||||   || ||||||||||| |||||||||| |||||| | |||||||||||||||||| ||||||    
T  31543047 ctcgccgttgttttctacttttggcttgtatttataa--ctttcatacgctttg-ttttggttgcttgattaacccttgctccacacatcaag-ttgtta 31543142  T
Q  144 ttggtatgatt 154  Q
    ||||| |||||    
T  31543143 ttggtgtgatt 31543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15143731 - 15143896
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||| ||||| |||||||| | |||||||||||| |  ||||||||||| || |||||||||||| | ||||||||||||||||||||    | || ||    
T  15143731 ccgaaatgggtaaacaaatttcgtgtgttctctctact-tttctctcgctatt-ttttctactttttgtttgtgtttataattgttcca----cgttaat 15143824  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| |||||| || || ||||||||||||| | | ||||||||||||||||||| ||||||| |||||    
T  15143825 attggttgcttgatta-ct-ttactccacacatcaattattttattggtatgatttttcaacgaattcacaaca 15143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 6661155 - 6661038
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||||||||||| |  ||||||| |||| ||||||||||| |||||||  ||||||||||||||||| | | | ||||||     
T  6661155 gttgttttctacttttg-cttgtgtttataact--tccatacacttt-attttggttgcttgattattacttgctccacacatcaaatatttaattggtg 6661060  T
Q  150 tgatttttcatcgaattcgcaac 172  Q
    ||| |||||||||||||| ||||    
T  6661059 tga-ttttcatcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 39397970 - 39397857
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| |       | |||||||||||| |||||||||| |||||| ||    
T  39397970 tgttttctacttttggcttgagtttataattgtttcatacactttg-ttttggttgtc-------cacttgctccacacgtcaagtttgtaattggtgtg 39397879  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||| || |||||||| |||||    
T  39397878 atttctcgtcgaattcacaaca 39397857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 31472531 - 31472458
Alignment:
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg-atttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||||||| || ||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  31472531 ttggttgcttgagtatctcttacttcacacatcaagtttgttatcggtgtgtatttttcatcgaattcgcaaca 31472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 31545395 - 31545502
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||||   || |||||||||| |||||  |||| |||||| | ||| |||||||||||||| |||||    
T  31545395 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacgcttt-attttaattgcttgattaacccttactccacacatcaag-ttgtt 31545490  T
Q  143 attggtatgatt 154  Q
    |||||| |||||    
T  31545491 attggtgtgatt 31545502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 20054100 - 20054267
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| || |||||||||||  |||||||||||| | ||||||||    | ||||||||||||||  |||||||||||| | |  ||||| |||||     
T  20054100 ccgaactgcgtaaacaaattcttttgtgttctctctttcttttctctct---tcgttttctacttttgt-ttgtgtttataacttt--catacactttg- 20054192  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||  ||||||| ||||||||||| | ||||| || |||||||| ||||||||| ||||||    
T  20054193 ttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattttt-atcgaattcacaacag 20054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 15552569 - 15552685
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga- 152  Q
    |||||||||||| |||||| |||||||   || ||||| ||||| |||| ||||| |||||||| ||| || ||| ||||||| ||||||||||| |||     
T  15552569 ttttctacttttagcttgtatttataa--ctttcatacactttg-ttttagttgcttgattatcccttacttcacgcatcaag-ttgttattggtgtgat 15552664  T
Q  153 tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| |||||    
T  15552665 tttttcatcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 2144561 - 2144504
Alignment:
Q  23 tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgtt 85  Q
    ||||||||||||| | ||||||||||||||   ||||||||||| ||||||||||||||||||    
T  2144561 tgtgttctctctttc-tttctctcgctgtt---ttctacttttg-cttgtgtttataattgtt 2144504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 23667644 - 23667725
Alignment:
Q  55 tttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    ||||||||||||||| || ||||  ||  ||||||||||||||| ||||||||| | | |||| || || ||||||||||||||    
T  23667644 tttctacttttggctcgtattta--atcattccatacgctttgagtttggttgcttaactatccctcgccccacacatcaagtt 23667725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18096914 - 18096740
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||||||| |||||||  |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18096914 ccgaacttggtcaacgaattcttttgtgttctctcttctttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 18096815  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18096814 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32219328 - 32219503
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32219328 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 32219427  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  32219428 ttttggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgattttttcatcgaattcacaaca 32219503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 24979952 - 24980127
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  24979952 cgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgttgttgtttttctacttttggcttgtgtttataattgttccatacactttga 24980051  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||    
T  24980052 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacag 24980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18099184 - 18099010
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||||||| |||  | ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18099184 ccgaactgggtcaacaaattcttttgtgttctcttttctttctctctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttga 18099085  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  18099084 tttttgttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36012070 - 36012243
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||     
T  36012070 ccgaactggatcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttg- 36012168  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  36012169 ttttggttgtttgattatcccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 53915508 - 53915336
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||    
T  53915508 gaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttgg-tt 53915411  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||||| ||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  53915410 ttggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaga 53915336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 53917678 - 53917506
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  53917678 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg- 53917581  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  53917580 ttttggttgcttgactatcccttgctccacacatcaagtttgttattagtgtgatttttcatcgatttcgcaaca 53917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 43226328 - 43226495
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||| |||   ||    
T  43226328 ccgaactgggtcaacaaattcttgtgttctctcttccttttctctcgctgttg-tttctacttttggcttgtattt-taattgttccatacactt--gtt 43226423  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  43226424 ttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttctcatcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 18162907 - 18163074
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||| ||||||||||| ||  |||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18162907 cgaactgtgtcaacaaatttttttgtgttctctcttctttttctctcgctgcagttttctacttttggcttgtgtttataattgttccatacactttgat 18163006  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||||||||||| ||| ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  18163007 tttggttgcctgattatcccttactccacacatcaaatttattattggtgtgatttttcatcgaattc 18163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3314928 - 3315100
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||| |||||     
T  3314928 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacgtttggcttgtgtttataattgttccatacactttgc 3315025  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||| || ||| |||||||||||||||||    
T  3315026 ttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgttttctcatcgaattcgcaaca 3315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 25688174 - 25687997
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||| || |||||  |||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  25688174 ccgaactgggtcaaaaagttcttttgtgttctctcttccttttctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacactttga 25688075  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaacag 174  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||  ||| |||||||||| |||||||    
T  25688074 ttttggttgtctgattatcacttgctccacacataaagtttgttattggtgtgagttttctcatcgaatttgcaacag 25687997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43421429 - 43421260
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||   || ||||||||||||||||||||||||||||||||| |||||     
T  43421429 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttatacttttggcttgtgtttataattgttccatacactttg- 43421335  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  43421334 ttttggttgcttgactatatcttgctccacacatcaactttgttattggtgtgatttttcatcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43423477 - 43423308
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||     
T  43423477 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg- 43423383  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  43423382 ttttggttgcttgactatcccttgctccacacatcaactttgttattggtgtaatttttcatcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 4308295 - 4308122
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  4308295 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg- 4308197  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||||||   ||||||  |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  4308196 ttttggttgttggattattccttgctccacacatcaag-ttgttattggtgtgatattttcatcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 1313652 - 1313822
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   |||||||||||||||| |||||||||||||||||||||||| |||||     
T  1313652 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttgacttgtgtttataattgttccatacactttg- 1313746  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  1313747 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgagtttttcatcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27101195 - 27101028
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||     
T  27101195 ccgaactggatcaacaaattcttttgtgttctctcttccttttctcttgctgttgttttctactttttgcttgtgattataattgttccatacactttg- 27101097  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattc 167  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  27101096 ttttggttgcctgattattcattgctccacacatcaag-ttgttattggtgtgatattttcatcgaattc 27101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43228534 - 43228696
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||| || ||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||     
T  43228534 ccgaactggatcaacaaattcttttgtgttctctcttcctttactctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttg- 43228631  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  43228632 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttctcatcgaa 43228696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 27635672 - 27635497
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||  ||||||||||||||| |||  | || || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  27635672 ccgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg 27635573  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
     |||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  27635572 -ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttctcatcgaatttgcaaca 27635497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 32264029 - 32263877
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||    
T  32264029 ttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtctgattatcactt 32263933  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaac 177  Q
    |||||||||||||| ||||||||| || ||||||||| |||||||| |||||||||    
T  32263932 gctccacacatcaaatttgttattagtgtgatttttcttcgaattcacaacagaac 32263877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12267989 - 12267818
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||     
T  12267989 ccgaactgggtcaacaaattcttttgtgttctctcttc--tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg- 12267894  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| ||| |||  | ||||||||||||||| |||||||||||| | |||||||||||| ||| ||||||    
T  12267893 ttttggttgcttgactattccctgctccacacatcaaatttgttattggtgtaatttttcatcgagttcacaacag 12267818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42990547 - 42990717
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||| || ||||| ||||| ||||||||||||||||||||||| ||||||| |  | ||||| |||||    
T  42990547 ccgaactgggtcaacaaattcttttgtgttctctct-ccttttcttctcgccgttgttttctacttttggcttgtatttataact--tacatacactttg 42990643  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42990644 -ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 45883183 - 45883357
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||||| |||  | || || | |||||||||||| ||||||||| ||||||||||||||||| |||||    
T  45883183 ccgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctcttgctgttttctacttctggcttgtgattataattgttccatacactttg 45883282  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| | | |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  45883283 -ttttggttgcttaactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaatttgcaaca 45883357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 9604621 - 9604446
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttc--cctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    ||||||| |||||||||||||||  |||||||||||||  | |||||||||||||||||||||| ||||||| |||| ||||||||||| ||||| ||||    
T  9604621 ccgaactaggtcaacaaattcttttgtgttctctcttcttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacacttt 9604522  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |  ||||||| | |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  9604521 g-gtttggttacttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaacag 9604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 1321771 - 1321897
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  1321771 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcctgattatcccttgctccacacatcaagtttgtt 1321867  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  1321868 attggtgtga-ttttcatcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15781122 - 15781294
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct-tccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||| |||| ||||| | | |||||||| | ||||||||||||||||| ||||||||||||| |||||||||| |||| ||    
T  15781122 ccgaactgggtcaacaaattcttttgttttctctcttcttttctctctc-gttgttttctacttttgacttgtgtttataactgttccatacacttt-at 15781219  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||  ||| |||||||| ||| |||||||||||||||||||||||||| || |||| |||||||||| ||||||    
T  15781220 tttgcctgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttccatcgaattcacaacag 15781294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6484603 - 6484773
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  ||||||||||||||    ||||||| | | ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  6484603 ccgaactgggtcaacaaattcttttgtgttctctctt---attctctctc-gctgttttctacttttgacttgtgtttataattgttccatacactttga 6484698  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | |||||  ||||||||||||||||| ||||||||| || |||||||| || |||||| |||||    
T  6484699 ttttggttgcttaattattccttgctccacacatcaaatttgttattagtgtgattttttattgaattcacaaca 6484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41849302 - 41849470
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | ||||||||||||||||||||||| ||||||| | |  ||||| |||||     
T  41849302 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctctc-gttgttttctacttttggcttgtatttataacttt--catacactttg- 41849397  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  41849398 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 11168393 - 11168519
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  11168393 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 11168489  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  11168490 attggtgtga-ttttcatcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28181247 - 28181417
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||||||||||||||  ||||||||||||| | ||||||| |  | |||||||||||||||||||||||||||||||||||||||| |||||     
T  28181247 ccgaactaggtcaacaaattctcctgtgttctctctt-cttttctct-gtcgctgttttctacttttggcttgtgtttataattgttccatacactttg- 28181343  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||||| ||||||||  |||||||| |||||    
T  28181344 ttttggttgtttgattgtc-cttgctccacacatcaagtttgttattggtgtgatttttgttcgaattcacaaca 28181417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1626697 - 1626525
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| | ||||||||  ||||||| |||||||||||||||||||||||| |||||     
T  1626697 ccgaactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgtttttcacttttgacttgtgtttataattgttccatacactttgt 1626600  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    ||||| |||| |||||||  |||||||||||||||||||||||||||||| || |||| | || ||||||||||||    
T  1626599 ttttg-ttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttcttatggaattcgcaaca 1626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 747050 - 747177
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  747050 tctcgcagttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 747146  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  747147 attggtgtgatttttcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 5926778 - 5926615
Alignment:
Q  1 ccgaactgggtcaacaaattctt-gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||| | ||||||||||||||||| |||||||||||||||||||| ||| ||||| |    
T  5926778 ccgaactgggtcaacaaattctttgtgttctcttttcc-tttctctctc-gttgttttctacttttg-cttgtgtttataattgttccttacactttg-t 5926683  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||| | |||||||  ||| || ||||||| ||||||||||||||| ||| ||||||||||||||    
T  5926682 tttggttacttgattattccttacttcacacatgaagtttgttattggtgtgagttttcatcgaattc 5926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 6065760 - 6065633
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  6065760 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 6065664  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  6065663 attggtgtgatttttcatcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 25533717 - 25533842
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||| |||    
T  25533717 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgat-atctcttgctccacacatcaagtt-gtt 25533811  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  25533812 attggtgtgatttttcatcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 50494291 - 50494417
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||    
T  50494291 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatctcttgctccacacatcaag-ttgtt 50494386  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  50494387 attggtgtgatttttcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 51726972 - 51726847
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  51726972 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattat-tcttgccccacacatcaag-ttgtt 51726877  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  51726876 attggtgtga-ttttcatcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 51943613 - 51943758
Alignment:
Q  1 ccgaactgggtcaacaaat--tcttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||  ||||||||||||||||| |||  | || || | ||||||||||||||||||||||||||||||||||||| || |||||    
T  51943613 ccgaactgggtcaacaaattctcttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccaaacactttg 51943712  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttat 144  Q
     |||||||||| ||| |||| ||||||||||||||||||||||||||    
T  51943713 -ttttggttgcttgactatcccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 38890332 - 38890441
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  38890332 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 38890428  T
Q  143 attggtatgattt 155  Q
    |||||| ||||||    
T  38890429 attggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 47701684 - 47701522
Alignment:
Q  2 cgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||||||| ||||||||||||| ||   |||||| ||||||||||    ||||||||||||||||||||||||| ||||||||||||||| ||||| |||    
T  47701684 cgaactggatcaacaaattcttttgcgttctctttcctttctctca---ttgttttctacttttggcttgtgttcataattgttccatacactttg-ttt 47701589  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    | ||||| |||||||  |||| ||   |||||||||||||||||||| ||||||||||||||||||||||    
T  47701588 tcgttgcttgattattacttgatc---acatcaagtttgttattggtgtgatttttcatcgaattcgcaa 47701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 54691586 - 54691417
Alignment:
Q  3 gaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||| |||| |||||||||| |  ||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||  |||| ||    
T  54691586 gaactaggtcgacaaattcttttatgttttctcttcc-tttctctctcggttgttttctacttttggcttgtgtttataattgtttcatacattttg-tt 54691489  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||| |||||||||||||| || |||||||||| | || ||| ||||||||||| |||||    
T  54691488 ttggttgcctgattatcacttgctccacacat-aaatttgttattgatgtgttttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 53468467 - 53468295
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | | ||||||||||||| |||||||||||||||||||||||| |||||     
T  53468467 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctattttctacttttgacttgtgtttataattgttccatacactttg- 53468371  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||| |||   |||||   ||||||||||||||||||||||||||||| || |||| |||||||||| ||||||    
T  53468370 ttttggctgctccattattcattgctccacacatcaagtttgttattggtgtggttttctcatcgaatttgcaaca 53468295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 880465 - 880302
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||| ||||||||||||||||||  |||||||||||||  ||||||||||||||   |||||||||||| ||||| |||||| |||||||||| |||||     
T  880465 ccgagctgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggtttgtgattataactgttccatacactttg- 880371  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaatt 166  Q
    |||||||||| ||||||   |||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  880370 ttttggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtgattttttcatcgaatt 880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 6063410 - 6063283
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||| | |||||| |||| ||||||||||||| |||||    
T  6063410 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttgattttggttgcttaattatcccttgttccacacatcaag-ttgtt 6063314  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    || ||| ||||||||||||||||||||||||    
T  6063313 atcggtgtgatttttcatcgaattcgcaaca 6063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 47148909 - 47148743
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||| ||  |||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||| |||||     
T  47148909 ccgaactaggtcaacaaattattctgtgttctctcttcc-tttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacactttg- 47148813  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||||||  ||||||||       |||||||||||||||||||||||| ||| |||||||| ||||| |||||||    
T  47148812 ttttggttgtttgattatc-------ccacacatcaagtttgttattggtgtgagttttcatcaaattcacaacaga 47148743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 28102013 - 28101848
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||| |||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||| |||||||||  |||| |  || | |||||||||    
T  28102013 aactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttgggttgtgttta--attgct--atccactttgattt 28101920  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  28101919 tggttgcttgattatcccttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 51674780 - 51674608
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc-tttg 97  Q
    ||||||| |||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||| ||||||||||| |  |||    
T  51674780 ccgaacttggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttatatttgttccatacccacttg 51674683  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
      ||||||||| |||||||  ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||    
T  51674682 --tttggttgcttgattattccttgctccatacatcaagtttgttattggtgtgattttctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 3307003 - 3307177
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||| |||||||||||  |||||||||||||| |||||||  | | |||||||||||||||||||||||||||||||||| ||||| |||||     
T  3307003 ccgaactaggttaacaaattcttttgtgttctctcttcc-tttctctttc-gctgttttctacttttggcttgtgtttataattgtttcatacactttgt 3307100  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaag-tttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||| |||  |||||||| |||||| || |||||||| |||||||||||| || ||| ||||||||||| ||||||    
T  3307101 ttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgtgttttctcatcgaattcacaacag 3307177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5886441 - 5886618
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttc-tctcgc---tgttgttttctacttttggcttgtgtttataattgttccatacgct 94  Q
    |||||||||||||||||||||  ||||||||||| |||  |||| ||| ||   ||||||||||||||||||||||||| |||||| |||||||||| ||    
T  5886441 ccgaactgggtcaacaaattcttttgtgttctctattctttttcttcttgctgttgttgttttctacttttggcttgtgattataactgttccatacact 5886540  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    |||  ||||||||| || ||||| |||||||||||||||||| ||||||||||| |||||||  || ||||||||||||||    
T  5886541 ttg--tttggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgatttttctcgtcgaattcgcaaca 5886618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5899914 - 5900091
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctg---ttgttttctacttttggcttgtgtttataattgttccatacgct 94  Q
    |||||||||||||||||||||||  ||||||||| |||  ||||| || ||||   ||||||||||||||||||||||| |||||| |||||||||| ||    
T  5899914 ccgaactgggtcaacaaattcttttgtgttctctattctttttcttcttgctgctgttgttttctacttttggcttgtgattataactgttccatacact 5900013  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    |||  ||||||||| || ||||| |||||||||||||||||| ||||||||||| |||||||  || ||||||||||||||    
T  5900014 ttg--tttggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgatttttctcgtcgaattcgcaaca 5900091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6232043 - 6232208
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  | |||||||||||| |||   | ||||| |||||||||||||||||||||||| |||| |    
T  6232043 ccgaactgggtcaacaaattcttttgtgttctctcttctttctctctcgctgtttttt---atttttgacttgtgtttataattgttccatacacttt-a 6232138  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||    || ||||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  6232139 ttttggttgcttgatta----ttactccacacatcaaatttgttattagtgtga-ttttcatcgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7606570 - 7606443
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  7606570 tctcgctgttgttttctactttttggcctgtattta--attgttccatacactttgattttggttgcttgactatctcttgctccacacatcaag-ttgt 7606474  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| | ||||||||||||||| ||||||    
T  7606473 tattggtgt-atttttcatcgaatttgcaaca 7606443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10955992 - 10955867
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  10955992 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 10955897  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  10955896 attggtgtga-ttttcatcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10958288 - 10958163
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  10958288 tctcgccgttgttttctacttttggcttgtattta--attgttctatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 10958193  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  10958192 attggtgtga-ttttcatcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 5191951 - 5192066
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |    
T  5191951 ttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 5192046  T
Q  151 gatttttcatcgaattcgcaa 171  Q
    || ||||||||||||||||||    
T  5192047 ga-ttttcatcgaattcgcaa 5192066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 10191324 - 10191151
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttct-ctcttccct---ttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||| ||||||||| ||||||  |   |||| ||||| ||||||||||||||||||||||| ||||  ||||| |||||| |||    
T  10191324 ccgaactgggtcaacaaattattgtgttcttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtattta--attgtcccatacactt 10191227  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    || |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||||||||  |||||||||||    
T  10191226 tg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcagattcgcaacag 10191151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 10084354 - 10084228
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  10084354 tctcgccgttgttttctacttttggcttgtattta--attgtcccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 10084259  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| ||||||||| |||||||||||    
T  10084258 attggtgtga-ttttcatcggattcgcaacag 10084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 456200 - 456325
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  456200 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 456295  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  456296 attggtgtga-ttttcatcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 458577 - 458702
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  458577 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 458672  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  458673 attggtgtga-ttttcatcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 38210663 - 38210789
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| ||||| |||  |||| ||| |||||||||||||||||||| |||    
T  38210663 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttgtttgtttgataatcccttgctccacacatcaagtt-gtt 38210758  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  38210759 attggtgtgatttttcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4666757 - 4666922
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | | |||||| ||||||||| |||| |||||||||||| ||||| |||| |    
T  4666757 ccgaactggatcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttatacttttggtttgtttttataattgtttcatacacttt-a 4666853  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| |||| ||| ||| ||||||||||||| ||| |||||||| ||||||||| || |||||    
T  4666854 ttttggttgcatgataatcacttactccacacatcaaatttattattggtgtgatttttcttcaaattc 4666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 25389198 - 25389326
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  ||| |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||    
T  25389198 tctcgccgttgttttctactttttggcttgtattta--attattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgt 25389293  T
Q  142 tattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||||| ||||||||||||||| |||||    
T  25389294 tattggtatgattttttcatcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 880251 - 880087
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||| |||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||| ||||| |||||| |||| ||||| ||||| |||    
T  880251 aactaggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggtttgtgattataactgtttcatacactttg-ttt 880157  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgca 170  Q
    |  |||| |||||||  ||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  880156 tctttgcttgattattccttactccacacatcaagtttattattggtgtgactttttcatcgaattcgca 880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10621494 - 10621366
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-gattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| |||| | |||||||||| | |||||| |||||||||||||||||| ||||    
T  10621494 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttggtttttggttgcttaattatcccttgctccacacatcaag-ttgt 10621398  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  10621397 tattggtgtgatttttcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 22114258 - 22114143
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||| |||     
T  22114258 ttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgctattggtgtga- 22114163  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  22114162 ttttcatcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 28761406 - 28761287
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| |||||| ||||||||  ||||||| |||| ||||||||||  |||||||| |||||||||||||||||| || ||||||||     
T  28761406 gttgttttctacttttg-cttgtgattataatt--tccatacacttt-attttggttgtttgattatcacttgctccacacatcaagattattattggtg 28761311  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  28761310 tgatttttcatcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 48361684 - 48361538
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  ||||||||||||| |||  | || || ||||||||||||||||| |||||| ||||||||||||||||| |||||     
T  48361684 cgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctctcgttgttttctacttttgacttgtgattataattgttccatacactttg- 48361586  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    |||||||||| |||||||   ||| |||| |||| |||||||||||||    
T  48361585 ttttggttgcttgattattcattgttccatacattaagtttgttattg 48361538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 5522592 - 5522466
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  | ||| |||||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  5522592 tctcgccgttgttttctacttttggcttgtatttataacttt--cttacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgtt 5522496  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||| |||||||||||||    
T  5522495 attggtgtga-ttttcaacgaattcgcaaca 5522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 11170670 - 11170788
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  ||| |||||||| |||||||||||||||| |||||||| ||| |||||||||||||| ||||||||  | |    
T  11170670 ttgttttctacttttggcttgtattta--attattccatacactttgattttggttgcttgattatcccttactccacacatcaag-ttgttattaatgt 11170766  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    || ||||||||||||||||||||    
T  11170767 ga-ttttcatcgaattcgcaaca 11170788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 31151590 - 31151754
Alignment:
Q  3 gaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||| ||||||||||  ||||||||||||||  ||||||||||||||  |||||||| ||  ||||||||||||| |  ||||||| ||||| ||    
T  31151590 gaactgggtaaacaaattctcatgtgttctctcttct-tttctctcgctgtt--tttctactctta-cttgtgtttataact--tccatacactttg-tt 31151682  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||  ||||||||||||||||||| | |||||||| |||||||||||||||||| |||||    
T  31151683 ttggttgcttgattattacttgctccacacatcaagtat-ttattggtgtgatttttcatcgaattcacaaca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 39715711 - 39715883
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-gatt 100  Q
    |||| |||||||||||||||  |||||||||||| |||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||   ||    
T  39715711 aactaggtcaacaaattcttttgtgttctctctttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttatttt 39715809  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    || ||| |  || |||| ||| ||  ||||||||||||||||||||||  | |||| ||||||||||| |||||    
T  39715810 tttgttactagactatcccttactgtacacatcaagtttgttattggtgcggttttctcatcgaattcacaaca 39715883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23633696 - 23633862
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| ||||| |||||||||||  |||||||||||| | ||||||||| ||||   |||||||| ||||||||||||||||   |||||||| |||||     
T  23633696 ccgaaatgggtaaacaaattcttttgtgttctctctttc-tttctctcgatgtt---ttctacttgtggcttgtgtttataa--attccatacactttg- 23633788  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||| || |||||| |||||||| ||| | |||||||| |||||||||||||||||| |||||    
T  23633789 ttttggttgcttgattttcacttgcttcacacatctagtat-ttattggtgtgatttttcatcgaattcacaaca 23633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 17795523 - 17795670
Alignment:
Q  20 tcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctc 119  Q
    |||||||||||||||| | |||||||||   ||||||||||||||||  ||||| |||||| |  |||||||  ||| ||||||||||| ||| ||||      
T  17795523 tcttgtgttctctctttcttttctctcg---ttgttttctacttttgt-ttgtgattataact--tccatacatttt-attttggttgcttgactatcag 17795615  T
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||    
T  17795616 ttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaacag 17795670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 19103963 - 19104110
Alignment:
Q  20 tcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctc 119  Q
    |||||||||||||||| | |||||||||   ||||||||||||||||  ||||| |||||| |  |||||||  ||| ||||||||||| ||| ||||      
T  19103963 tcttgtgttctctctttcttttctctcg---ttgttttctacttttgt-ttgtgattataact--tccatacatttt-attttggttgcttgactatcag 19104055  T
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||    
T  19104056 ttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaacag 19104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 53591477 - 53591597
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||| |||||| ||| ||||||||||||||||||||  |||| |||||||||| |||||||| |||| |||||||||||| |||||||||| | ||    
T  53591477 tgttttctgcttttgacttatgtttataattgttccatacattttg-ttttggttgcttgattatcccttgttccacacatcaaatttgttattgatgtg 53591575  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||| |||| |||||| |||||    
T  53591576 ttttctcattgaattcacaaca 53591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 53894009 - 53893900
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||| ||| | ||||| |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  53894009 ttttctacttttggctt-tgtatttaattattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 53893913  T
Q  154 ttttcatcgaatt 166  Q
    |||  ||||||||    
T  53893912 tttcgatcgaatt 53893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 28412995 - 28412870
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |  ||||| |||   |||||||| | |||||||| |||||||||||||||||| |||||    
T  28412995 tctcgccgttgttttctacttttgacttgtatttataacttt--catacacttg--ttttggttacttgattatcccttgctccacacatcaag-ttgtt 28412901  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| || ||||||||||||||| |||||    
T  28412900 attggtgtgttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30006084 - 30006151
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttg 66  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||    
T  30006084 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttg 30006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 3859802 - 3859930
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||| | | |||| |||  ||||||||||||| |||||    
T  3859802 tctcgccgttgttttctacttttggcttgtattt-taattgtttcatacactttg-ttttggttgcttaactatcccttattccacacatcaag-ttgtt 3859898  T
Q  143 attggtatgatttttc-atcgaattcgcaaca 173  Q
    |||||| ||| ||||| ||||||||| |||||    
T  3859899 attggtgtgacttttcgatcgaattcacaaca 3859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42992629 - 42992799
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct-tccctttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||| |||||||| |||  ||||| ||| ||||| |||||  ||||||||| |||||| | | | ||||||| |  ||||||| |||||     
T  42992629 ccgaactgagtcaaaaaattcttttgtattctctctccttttcttctcgccattgttttctgcttttgacatatatttataact--tccatacactttg- 42992725  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||| || ||| |||||||||||||| |||||    
T  42992726 ttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtga-ttttcatcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 26720850 - 26720928
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaa 135  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||    
T  26720850 ttttctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 4103861 - 4103736
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| |||||||| | ||| ||||||| |  ||||||| ||||  ||| |||||  ||| |||| |||||||||| |||||||||||||    
T  4103861 tctcgccgttgttttttacttttgacatgtatttataact--tccatacactttt-tttcggttgtttgactatc-cttgctccacgcatcaagtttgtt 4103766  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  4103765 attggtgtga-ttttcatcgaattcgcaaca 4103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42992513 - 42992594
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctgttgttttctacttttggcttgtgtttataa 80  Q
    |||||||||||||||||||| ||  ||||||||||| || ||||| ||||| ||||||||||||||||||||||| |||||||    
T  42992513 ccgaactgggtcaacaaatttttttgtgttctctct-ccttttcttctcgccgttgttttctacttttggcttgtatttataa 42992594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 561739 - 561640
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| ||||||||||||| |  ||||||| |||||  ||||||||| |||||||  ||| ||||||||||||||| | |||||||| ||    
T  561739 tgttttctacttttg-cttgtgtttataact--tccatacactttg--tttggttgcttgattattacttactccacacatcaagtattttattggtgtg 561645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 35919085 - 35919018
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgc 123  Q
    ||||||||||||||||| | ||||  |||||||||||| ||||||||||||||| ||||||||| |||||    
T  35919085 ttttctacttttggcttctattta--attgttccatacactttgattttggttgtctgattatcccttgc 35919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8183148 - 8183035
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||||||  ||||||||||||   ||||||| || |||   ||||||||||| |||||||||||||||||||||||| | || |    
T  8183148 ccgaattgggtcaacaaattcttttgtgttctctctttt-tttctcttgcagtt---ttctacttttgacttgtgtttataattgttccatacacctt-a 8183054  T
Q  99 ttttggttgcctgattatc 117  Q
    |||||||||| ||| ||||    
T  8183053 ttttggttgcttgactatc 8183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 36957651 - 36957713
Alignment:
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||| |||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaag-ttgttattgatatga-ttttcatcgaattc 36957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 53597504 - 53597644
Alignment:
Q  23 tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttg 122  Q
    ||||||||||| |  ||||||||||   |||||||||| ||||| ||||||||||||||| ||||   | | ||||| |||||||| ||||||| |  ||    
T  53597504 tgtgttctctcctttctttctctcg---ttgttttctatttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt--tg 53597594  T
Q  123 ctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||| | |||||||| ||| |||||||||||||| |||||    
T  53597595 ctccacacataaagtattttattggtgtga-ttttcatcgaattcacaaca 53597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 25634177 - 25634294
Alignment:
Q  49 tgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    |||||||||||||||||| |||||||||||||||||| |  ||   ||| | |||||||| |||||||  |||||||| ||||| |||| | ||||||||    
T  25634177 tgttgttttctacttttg-cttgtgtttataattgttacccac---ttg-tattggttgcttgattattacttgctccccacattaagtat-ttattggt 25634270  T
Q  149 atgatttttcatcgaattcgcaaca 173  Q
     ||| |||||||||||||| |||||    
T  25634271 gtga-ttttcatcgaattcacaaca 25634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1674208 - 1674292
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc 87  Q
    ||||||||||| |||||||| | ||| ||||||||| | ||||||||| ||||   ||||| ||||  ||||||||||||||||||||    
T  1674208 ccgaactgggtaaacaaattttgtgtattctctctttcttttctctcgatgtt---ttctaattttttcttgtgtttataattgttcc 1674292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10612794 - 10612761
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  10612794 ccgaactgggtaaacaaattcttgtgttctctct 10612761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 25635672 - 25635788
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||||||||||| |||| |  ||   ||| | |||||||| |||||||  ||||||||||||||||||| | ||||| ||     
T  25635672 gttgttttctacttttg-cttgtgtttataactgttacccac---ttg-tattggttgcttgattattacttgctccacacatcaagtat-ttattagtg 25635765  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||| |||||||||||||| |||||    
T  25635766 tga-ttttcatcgaattcacaaca 25635788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 29897580 - 29897527
Alignment:
Q  121 tgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||| || |||| ||| ||||||| |||||    
T  29897580 tgctccacacatcaagtttgttattggtgtggttttctcaacgaattcacaaca 29897527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35917937 - 35917873
Alignment:
Q  112 attatctcttgctccacacatcaagtttgttattggtatgattttt-catcgaattcgcaacagaa 176  Q
    |||||| |||| |||| |||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  35917937 attatcccttgttccatacatcaagtt-gttattggtgtaattttttcatcgaattcgcaacagaa 35917873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 80133 - 80305
Alignment:
Q  3 gaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  80133 gaactgggtcaacaaattcttttgtgatctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgatt 80232  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    || |||||||||||||  |||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  80233 ttcgttgcctgattattacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 80305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 9e-62; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 79460 - 79631
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||||||||||| ||  |||||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  79460 aactgggtcaacaaattattttgtgttctctcttctttttctcttgctgttgttttctacttttggcttgtgattataattgttccatacactttgattt 79559  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  79560 tggttgcctaattatcccttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaaca 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43623596 - 43623423
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |    
T  43623596 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttatgattataattgttccatacactttaa 43623498  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43623497 ttttggttgcctgattatctattgctccacacatcaagttagttattggtgtgatttttcatcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 21520709 - 21520534
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||  ||||||||||||||  |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  21520709 ccgaactttgtcaacaaattcttttgtgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttta 21520610  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  21520609 attttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 21520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6258833 - 6258668
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||| || |||||     
T  6258833 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttagcttgtgtttataattgttccagacactttg- 6258737  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  6258736 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtatgttttctcatcgaattc 6258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 17849360 - 17849529
Alignment:
Q  5 actgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    |||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  17849360 actgggtcaacaaattcttttgtgttctctcttcc-tttctctccc-gttgttttctacttttggcttgtgtttaaaattgttccatacactttg-tttt 17849456  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  17849457 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaacag 17849529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 42923525 - 42923346
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| || ||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  42923525 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttg 42923427  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaact 178  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||  || ||||||| ||||| ||||    
T  42923426 tttttggttgcttgattatctcttgctccacacatcaagtttgttattggtgtgttttcacaacgaattcacaacaaaact 42923346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19007879 - 19008052
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  ||||||||| |||  |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||     
T  19007879 ccgaactaggtcaacaaattcttttgtgttctctattca-tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg- 19007975  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  19007976 ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaacag 19008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3022411 - 3022582
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||||||||||||||| |||||     
T  3022411 ccgaactgggtcaacaaattcttttgtgttctctcttcctttt-tctctc-gttgttttctgcttttggcttgtgtttataattgttccatacactttg- 3022507  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| || |||| | ||| ||||||| |||||    
T  3022508 ttttggttgcttgattatcacttgctccacacatcaagtttgttatttgtgtgatctctcaccgaattcacaaca 3022582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 6264164 - 6263993
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||||||| |||||||||| ||||||||||||||| |||||     
T  6264164 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctactttcggcttgtgttaataattgttccatacactttg- 6264068  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| || || ||| ||||||||||| |||||    
T  6264067 ttttggttgcctgatagtcacttgctccacacatcaagtttgttattagtgtgttttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 7462940 - 7462789
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||| ||||||||  ||    
T  7462940 ttgtgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgattatccttt 7462842  T
Q  122 gctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||| | | || |||| ||| |||||||||||||    
T  7462841 gctccacacatcaagtttgttatcgatgtggttttctcaacgaattcgcaaca 7462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28196874 - 28197045
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||||||||| ||||| |||||     
T  28196874 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgtttcatacactttg- 28196970  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||  || |||| ||||||||||||||||| |||||||||||| ||||||||||||||| || |||||    
T  28196971 ttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtgatttttcatcgaactcacaaca 28197045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 14837507 - 14837680
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||| |||||||| | | |||||| |||||||||||||||||||||||||||| |||| |||||     
T  14837507 ccgaactgagtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttatacttttggcttgtgtttataattgttctatacactttg- 14837603  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagt-ttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||| | |||||| ||||||||||| ||||||    
T  14837604 ttttggttgcttgattatcacttgctccacacatcaagtattgttattgatgtgatttctcatcgaattcacaacag 14837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22287352 - 22287181
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||| |||| ||||| |||||||||||||||||| || ||     
T  22287352 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacgtttgacttgtttttataattgttccatacactatg- 22287256  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  22287255 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 22163037 - 22162868
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||| |||||| ||||||||||  |||| |    
T  22163037 cgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgcttataactgttccatacaatttg-t 22162943  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||| |||||||| |||||| ||||||||||  ||||||||||| || ||| ||||||||||||||||||    
T  22162942 tttggttgcttgattatcccttgcttcacacatcaaaattgttattggtgtgttttctcatcgaattcgcaacag 22162868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 27105085 - 27105209
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||  ||||  |||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  27105085 tctcgccgttgttttctacttttggcttgcattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgtt 27105181  T
Q  143 attggtatgatttttcatcgaattcgca 170  Q
    |||||| |||||||||||||||||||||    
T  27105182 attggtgtgatttttcatcgaattcgca 27105209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15539545 - 15539400
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||| |||| |||||     
T  15539545 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctactttttgcttgtgtttataattgttcaatacactttg- 15539449  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    ||||| |||| |||| ||| ||||||||||||||||||||||||||||||    
T  15539448 ttttgattgcttgataatc-cttgctccacacatcaagtttgttattggt 15539400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 45279968 - 45279844
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  45279968 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 45279873  T
Q  143 attggtatgatttttcatcgaattcgcaa 171  Q
    |||||| |||||| |||||||||||||||    
T  45279872 attggtgtgatttctcatcgaattcgcaa 45279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 22707765 - 22707595
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||| |||||||||||||||  |||||||||||||| |||||||| | | |||||||||||| || |||||||||||||||||||||||| ||||| ||    
T  22707765 gaactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttctgccttgtgtttataattgttccatacactttg-tt 22707669  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||| ||||| |  ||| ||||||||||||| |||||||||||| || |||| |||||||||||||||||    
T  22707668 ttggttgcttgattgttccttactccacacatcaaatttgttattggtgtggttttctcatcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 28459157 - 28459037
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||| | |||||||| ||    
T  28459157 tgttttctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtgttttattggtgtg 28459059  T
Q  152 atttttcatcgaattcgcaacag 174  Q
    | |||||||||||||| ||||||    
T  28459058 a-ttttcatcgaattcacaacag 28459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 23452204 - 23452084
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  23452204 tctcgccgttgttttctacttttagcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 23452108  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    |||||| ||| ||||||||||||||    
T  23452107 attggtgtga-ttttcatcgaattc 23452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22407470 - 22407346
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||     
T  22407470 ccgaacttggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gatgttttctacttttggcttgtgtttataattgttccatacactttg- 22407374  T
Q  99 ttttggttgcctgattatctcttgctcc 126  Q
    |||||||||| ||| |||||||||||||    
T  22407373 ttttggttgcttgactatctcttgctcc 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 45238990 - 45238837
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc-atacgctttgattttggttgcctgattatctct 120  Q
    |||||||||||||||  ||||||||||||||   |||||||||||||||||| |||||| ||||   || | ||| |||||||||||| ||| |||| ||    
T  45238990 ttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgct 45238895  T
Q  121 tgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaact 178  Q
    || |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  45238894 tggtccacacatcaagtttattattggtgtgatttttcatcgaattcgcaacaaaact 45238837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5375362 - 5375218
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  || ||||| |||||| ||||  ||||||| ||||| |||||||||||||||||| |||||    
T  5375362 ccgaactgggtcaacaaattcttttgtgttctctcttcttttctctcttgctgttttttt--acttttgacttgtatttataattgttccatacactttg 5375265  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttatt 145  Q
     ||||| |||| |||||||| ||| |||||||||||||||||||||||    
T  5375264 -ttttgattgcttgattatcccttactccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 17848681 - 17848814
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||   |||||||||| | ||| ||||||||||||| ||||| ||  ||||    
T  17848681 gaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctactttttgtttgcgtttataattgtttcatacactgcgatt 17848776  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  17848777 ttggttgcttgattatcacttgctccacacatcaagtt 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||     
T  19501958 ttttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 19501863  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  19501862 ttttcatcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 36558848 - 36558721
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| |||| || ||||  |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| || |    
T  36558848 tctcgcagttgttttctactttttggctcgtattta--attgttccatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttat 36558753  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  36558752 tattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 36561108 - 36560981
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| |||| || ||||  |||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||| ||    
T  36561108 tctcgcagttgttttctactttttggctcgtattta--attgttccatacgctttg-ttttggttgcttgattattccttgctccacacatcaagtt-gt 36561013  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  36561012 tattggtgtgatttttcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 38020370 - 38020484
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||| |||||||  ||||||||| ||||||| |||||||||||| ||    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtg 38020468  T
Q  152 atttttcatcgaattc 167  Q
    ||||| |||| |||||    
T  38020469 attttacatcaaattc 38020484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40032069 - 40031979
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccata 90  Q
    ||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  40032069 ccgaactgggtcaacaaattcttttgtattctctcttccttttctctcgctgttgttttctacattt-gcttgtgtttataattgttccata 40031979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 34979554 - 34979440
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||| | |||||  ||| |||||||||||||||||||||||||| ||    
T  34979554 tgttttctacttttgacttatgtttataattgttccatacacttt-attttggttgctttattattccttactccacacatcaagtttgttattggtgtg 34979456  T
Q  152 atttttcatcgaattc 167  Q
     ||| |||| ||||||    
T  34979455 ttttctcattgaattc 34979440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 35217936 - 35217826
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||    
T  35217936 tctcgccgttgttttctacttttgacttgtattta--attattccatacgctttg-ttttggttgcttaattatctcttgctccacacatcaag-ttgtt 35217841  T
Q  143 attggtatgattttt 157  Q
    |||||| ||||||||    
T  35217840 attggtgtgattttt 35217826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  56 ttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattt 155  Q
    ||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||    
T  19504291 ttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tt 19504196  T
Q  156 ttcatcgaattcgcaaca 173  Q
    |||||||||||| |||||    
T  19504195 ttcatcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 24162190 - 24162062
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||||  |||||||||| |||||||||||| |||||||||||||| |||||    
T  24162190 tctcgccgttgttttctacttttggcttgtattta--attgtttcatacactttt-ttttggttgcttgattatctctttctccacacatcaag-ttgtt 24162095  T
Q  143 attggtatgat-ttttcatcgaattcgcaacag 174  Q
    |||||| |||| ||||||||| |||| ||||||    
T  24162094 attggtgtgatattttcatcgtattcacaacag 24162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 45332147 - 45332020
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||| || |||||||| |||||||||| | |||||| |||| ||||||||||||||| ||    
T  45332147 tctcgccgttgttttctactttttggcttgtattta--attgttacaaacgctttg-ttttggttgcttaattatcccttgttccacacatcaagtt-gt 45332052  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  45332051 tattggtgtgatttttcatcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 13910012 - 13909902
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  13910012 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgtt 13909917  T
Q  143 attggtatgattttt 157  Q
    |||||| ||| ||||    
T  13909916 attggtgtgactttt 13909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 38414149 - 38414028
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||||| |||| ||||||| |||||| | ||||||||||| ||| |||||| |||||     
T  38414149 gttgttttctacttttaccttgtgtttataattattccatacactttg-ttttcgttgcctaattatcacgtgctccacacaccaattttgtt-ttggtg 38414052  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||| |||||| |||||    
T  38414051 tgatttttcatggaattcacaaca 38414028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 11739532 - 11739421
Alignment:
Q  61 cttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcat 160  Q
    |||||| ||||| |||||||||||| ||||| ||||| ||||  || | ||| |||| ||||||| |||||||||||||||||||||| |||||||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttattt-cttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcat 11739434  T
Q  161 cgaattcgcaaca 173  Q
    ||||||| |||||    
T  11739433 cgaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 42453798 - 42453890
Alignment:
Q  78 taattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  42453798 taattgttccatacatttt-attttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 22874431 - 22874519
Alignment:
Q  84 ttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||||| |||| ||||| ||| |||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  22874431 ttccatacactttg-ttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 35215559 - 35215449
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| || |||| |||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  35215559 tctcgccgttgttttctacttttgacttgtattta--attatttcatatgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgtt 35215464  T
Q  143 attggtatgattttt 157  Q
    |||||| ||||||||    
T  35215463 attggtgtgattttt 35215449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 44289083 - 44288987
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||| |||||||||||||||||||||| ||||| |||||    
T  44289083 ccgaactgggtcaacaaattcttttgtgttctctcttca-tttctctctc-gctgttttctactgttggcttgtgtttataattgtttcatacactttg 44288987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11578123 - 11577957
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||| ||| |||||||| | |||||| ||||||  ||||||||||   ||||||||||||||||||||||||||| |    |||||||  |||| ||    
T  11578123 ccgaactaggtaaacaaatttcgtgtgttttctcttttctttctctcg---ttgttttctacttttggcttgtgtttaaa---cttccatatacttt-at 11578031  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||  |||| |||||||||||||||| |||||  | ||| ||||||||||||||| |||||    
T  11578030 tttggttgcttgattattacttgttccacacatcaagttt-ttattaatgtgattttttcatcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20146623 - 20146459
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| ||| |||| | |||| |||||||| | |||||||||   |||||||||||||||| ||||||||||||||||||||   |   |||||    
T  20146623 ccgaactgggtaaacgaatttcgtgtgatctctctttcttttctctcg---ttgttttctacttttg-cttgtgtttataattgttcc---catgttgat 20146531  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| |||||| || || || |||||||||||| | |||||||| |||||||||| ||||||| |||||    
T  20146530 attggttgcttgatta-ct-ttacttcacacatcaagtattttattggtgtgatttttcaacgaattcacaaca 20146459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 23871058 - 23871230
Alignment:
Q  4 aactgggtcaacaaattcttgtg--ttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattg--ttccatacgctttgat 99  Q
    |||| ||||||||||||||| ||  ||||||||||  |||||||| | | ||||||||||||||| ||||||||||||||||  || ||||| ||||| |    
T  23871058 aactaggtcaacaaattcttttgagttctctcttca-tttctctccc-gctgttttctacttttgccttgtgtttataattgtttttcatacactttg-t 23871154  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtat-gatttttcatcgaattcgcaacag 174  Q
    |||||||   | ||| |  ||||||||||||||||| |||||||||||| | | ||| |||||||||| |||||||    
T  23871155 tttggttatttaattgttccttgctccacacatcaaatttgttattggtgtagttttctcatcgaatttgcaacag 23871230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 42064793 - 42064878
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||||||||||| |||||| ||||  |||||||||||| ||||| |||| ||||| |||| ||| ||||||||||||||||||||    
T  42064793 gttgttttctactttttgcttgtattta--attgttccatacactttg-ttttagttgcttgatcatcccttgctccacacatcaagtt 42064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 20592368 - 20592484
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||| |||||| |||||| |  ||||||| ||||| |||||||||| |||||||  ||||||| |||||||| || | |||||||| ||||    
T  20592368 ttttctacttttg-cttgtgattataact--tccatacactttg-ttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgat 20592463  T
Q  154 ttt-tcatcgaattcgcaaca 173  Q
    ||| ||||||||||| |||||    
T  20592464 tttttcatcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 37962852 - 37962791
Alignment:
Q  112 attatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||| |||||| | |||||||||||||||||| |||||    
T  37962852 attatcacttactccacacatcaagtttattattgatgtgatttttcatcgaattcacaaca 37962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17897261 - 17897125
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||||   ||||||||||||||| |||||||||||||| |||  |||   ||||| |    
T  17897261 ccgaactgggtaaacaaatttcgtgtgttctctctttc-tttctctcg---ttgttttctactttt-gcttgtgtttataactgt--catcaactttg-t 17897170  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    ||||||||| ||||||  | |||||||||||||||||| | ||||||    
T  17897169 tttggttgcttgatta--ttttgctccacacatcaagtattttattg 17897125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31732792 - 31732666
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||| |||||| ||||||||| |||||||||| |  | ||||||||||||||   |||||||||||| ||||| ||||||   |||||||| || || ||    
T  31732792 ccgagctgggtaaacaaattcgtgtgttctctat--cttttctctcgctgtt---ttctacttttggtttgtgattataa--cttccatacactctg-tt 31732701  T
Q  101 ttggttgcctgattatctcttgctccacacatcaa 135  Q
    |||||||| |||||||  |||||| ||||||||||    
T  31732700 ttggttgcttgattataacttgcttcacacatcaa 31732666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40699615 - 40699697
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttc 86  Q
    ||||||| ||| |||||||| | ||||||||||||| | ||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  40699615 ccgaactaggtaaacaaatttcgtgtgttctctctttc-tttctctcgctatt--tttctacttttg-cttgtgtttataattgttc 40699697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 42923347 - 42923293
Alignment:
Q  119 cttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||||| || |||  || ||||||| |||||    
T  42923347 cttgctccacacatcaagtttgttattggtgtgttttcacaacgaattcacaaca 42923293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22800878 - 22800704
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||     
T  22800878 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttg- 22800780  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| ||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  22800779 ttttggttgcttgactatcccttgctccccacatcaagtttgttattggtgtgatttttcatcgaattcgcaacag 22800704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22802750 - 22802577
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  ||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||     
T  22802750 ccgaactaggtcaacaaattcttttgtgttctatcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttg- 22802652  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22802651 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14789444 - 14789273
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| |    
T  14789444 ccgaactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-t 14789347  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14789346 tttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 36919600 - 36919432
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | ||||||||||||||| |||||||||||||||||||||||| |||| |    
T  36919600 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacacttt-a 36919504  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgca 170  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36919503 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgca 36919432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 52942504 - 52942329
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52942504 ccgaactgagtcaacaaattcttttgtgttctctcttcttttcctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 52942405  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||| || ||| |||||||||||||| ||||||    
T  52942404 ttttgattgcctgattatctcttactccacacatcaaatttgttatttgtgtgattttttcatcgaatttgcaaca 52942329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 36921509 - 36921338
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||  || |||||||||||||||||||||||||||||||||| ||||| |||| |    
T  36921509 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctct-tgctgttttctacttttggcttgtgtttataattgtttcatacacttt-a 36921413  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36921412 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 14787442 - 14787274
Alignment:
Q  4 aactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  14787442 aactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 14787345  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14787344 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2891609 - 2891780
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |    
T  2891609 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt-a 2891705  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||   ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2891706 ttttggttgcttgattattctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 38928193 - 38928024
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  |||||||||||||| | ||| ||||   |||||||||||||||||||||||| |||||| |||||||||| |||||     
T  38928193 ccgaactgggtcaacaaattcttttgtgttctctctt-cttttatctc---gttgttttctacttttggcttgtgattataactgttccatacactttg- 38928099  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38928098 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 40637391 - 40637567
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg- 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  40637391 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgt 40637490  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaacag 174  Q
     |||||||||| |||||||  |||||||||||||||||| ||||||||||| |||| || ||| ||||||||||||||    
T  40637491 tttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatattctcaacgaattcgcaacag 40637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33415504 - 33415334
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||| ||||||||  |||||||||||||  ||||||||||||||   ||||||||||||||||||||||||||||| |||||| ||||||    
T  33415504 ccgaactgggtcaataaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgtttataattgtcccatacactttga 33415409  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||    
T  33415408 ttttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtgatttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24889113 - 24889286
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  24889113 ccgaactgggtcaacaaattcttttgtgttatctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg- 24889211  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||||||   ||||||  |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  24889212 ttttggttgttagattattccttgctccacacatcaag-ttgttattggtgtgatattttcatcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 40091431 - 40091259
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||  || | ||||||||||||||||||||||||||||| |||||||| |||| |    
T  40091431 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctct-tgctattttctacttttggcttgtgtttataattattccatacacttt-a 40091335  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg-atttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  40091334 ttttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaatttttcatcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 17662261 - 17662091
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||     
T  17662261 ccgaactgggtcaacaaattcttttgtgttctctcttc--tttttctcgctgttgttttctacttttggcatgtgattataattgttccatacactttg- 17662165  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
     |||| |||| |||||||| |||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  17662164 gtttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcaacgaattcgcaacag 17662091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24879307 - 24879474
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  24879307 ccgaactgggtcaacaaattctcttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg- 24879405  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtat-gatttttcatcgaattcgcaacagaa 176  Q
    |||||||||| |||||||           ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  24879406 ttttggttgcttgattat----------tcacatcaagtttgttattggtgtggttttttcatcgaattcacaacagaa 24879474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 49088922 - 49089044
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| ||| ||| ||||||||||||||||||||||     
T  49088922 gttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttactcaacacatcaagtttgttattggtg 49089020  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  49089021 tgatttttcatcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24446670 - 24446502
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||    |||||||||||||||||||||||||||||||| |||||||| |||| |    
T  24446670 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctc----ttgttttctacttttggcttgtgtttataatttttccatacacttt-a 24446577  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||| || ||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  24446576 ttttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47563078 - 47563248
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||||||||||   ||||||||||||||| |||||||||||||||||||| |||||     
T  47563078 ccgaacttggtcaacaaattcttttgtgttctctcttcc-tttctctcgctgtt---ttctacttttggcttatgtttataattgttccatacactttg- 47563172  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||| || |||| ||||| ||||| |||||    
T  47563173 ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttctcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 16453676 - 16453796
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  16453676 tgttttctacttttggcttgtgattataactgtttcatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 16453774  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| |||||    
T  16453775 atttttcatcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 27499362 - 27499530
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctt---tctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||||||||||||||  |||||||||||||| ||   |||||| || ||||||||||||||||| |||||||||||||||||||||||  |||||    
T  27499362 aactgggtcaacaaattcttttgtgttctctcttcctttctctctctctctcgttgttttctacttttgacttgtgtttataattgttccataaactttg 27499461  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
     |||||||||| || ||||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27499462 -ttttggttgcttggttattcattgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 27499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 37089339 - 37089211
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  37089339 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtttgtt 37089243  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||||||||||||||||||||||    
T  37089242 attggtgtgatttttcatcgaattcgcaacag 37089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 47868774 - 47868894
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| |||   |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||     
T  47868774 gttgttttctacttttggcttgtatttt--attgttccatacactttgattttggttgcctgattatcccttgctccacacatcaag-ttgttattggtg 47868870  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  47868871 tgatttttcatcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 48486638 - 48486803
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||| ||  ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||| ||    
T  48486638 gaactgggtcaacaaattattttgtgttttctcttccttttctcttgatgttgttttctacttttggcttgtgtttataattgttccattcactttg-tt 48486736  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    || ||||| |||||||| |||| ||||| |||||| |||||||||||| || ||| |||||||||||    
T  48486737 ttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgtgttttctcatcgaattc 48486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 3824626 - 3824446
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctgttgtttt-ctactttt-ggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||||||  ||||||||| |||  ||||| || |||| |||||| |||||||| ||||||||||||||| ||||||||||  ||    
T  3824626 ccgaactgggtcaacaaattcttttgtgttctctattctttttcttcttgctgctgtttttctactttttggcttgtgtttataactgttccatacattt 3824527  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaacag 174  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||  ||||||||||| ||||||    
T  3824526 tgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttctcatcgaattcacaacag 3824446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24880769 - 24880938
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg- 97  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||     
T  24880769 ccgaactgggtcaacaaattctcttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgt 24880868  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtat-gatttttcatcgaattcgcaacagaa 176  Q
     |||||||||| |||||||           ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  24880869 gttttggttgcttgattat----------tcacatcaagtttgttattggtgtggttttttcatcgaattcacaacagaa 24880938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11437679 - 11437855
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccct---ttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||| |   |||| ||||| ||||||||||||||||||||||| ||||  |||||||||||| |    
T  11437679 ccgaactgggtcaacaaattcttttgtgttcttctcttccttgtgttcttctcgccgttgttttctacttttggcttgtattta--attgttccatacac 11437776  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||||| ||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
T  11437777 tttgtttttggctgcttgattatctcttgctccatacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 13547494 - 13547635
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||    
T  13547494 ttgtgttctctcttcc-tttctctctc-gatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcactt 13547591  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    | ||||||||||||||||||||||||| || ||| |||| ||||    
T  13547592 gttccacacatcaagtttgttattggtgtgttttctcattgaat 13547635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11435271 - 11435438
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccct---ttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||| |   |||| |||||  |||||||||||||||||||||| ||||  |||||||||||| |    
T  11435271 ccgaactgggtcaacaaattcttttgtgttcttctcttccttgtgttcttctcgccattgttttctacttttggcttgtattta--attgttccatacac 11435368  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  11435369 tttgtttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttttcatcgaa 11435438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 16455594 - 16455715
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||| |||| |||| || |||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  16455594 tgttttctagttttagcttatgattataactgttccatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 16455692  T
Q  152 atttttcatcgaattcgcaacag 174  Q
    |||||||||||||||| ||||||    
T  16455693 atttttcatcgaattcacaacag 16455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12395861 - 12395692
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||| ||||||||||| ||||  |||||||||||||| ||||| || | ||||| ||||||||||||| ||||||||||||| ||| |||| |||||     
T  12395861 ccgaacagggtcaacaaactcttttgtgttctctcttcc-tttctgtctc-gttgtcttctacttttggcatgtgtttataatttttcgatactctttg- 12395765  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||| ||||| ||||    
T  12395764 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcattgaatttgcaa 12395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12400823 - 12400654
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||| ||||||||||| ||||  |||||||||||||| ||||| || | ||||| ||||||||||||| ||||||||||||| ||| |||| |||||     
T  12400823 ccgaacagggtcaacaaactcttttgtgttctctcttcc-tttctgtctc-gttgtcttctacttttggcatgtgtttataatttttcgatactctttg- 12400727  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||| ||||| ||||    
T  12400726 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcattgaatttgcaa 12400654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 6133155 - 6133326
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||| |||||||||||||||||  |||||||||||||  |||||||| | ||||||||||||||||| |||||||||||||||||| ||||| ||||| |    
T  6133155 cgaattgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gttgttttctacttttgacttgtgtttataattgtttcatacactttg-t 6133251  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt--catcgaattcgcaac 172  Q
    || |||||| |||||||  |||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||    
T  6133252 ttcggttgcttgattattccttgctccacacatcaagtttgttattggtgtaattttttccatcgaattcacaac 6133326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 37313044 - 37312924
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||| |||||||| ||    
T  37313044 tgttttctacttttggcttatgattataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttattattggtgtg 37312946  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||    
T  37312945 atttttcatcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 22782704 - 22782577
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  22782704 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttgtttttggttgcttaattatcccttgctccacacatcaag-ttgtt 22782608  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||| ||||||||||||||    
T  22782607 attggtgtgatttttcgtcgaattcgcaaca 22782577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 53405508 - 53405626
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||||||||| ||||||| |  |||||||  |||| |||||||||| |||||||| ||||||||||||||||||||| |||||||| ||    
T  53405508 tgttttctacttttggcttgtatttataact--tccatacattttg-ttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtg 53405604  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||    
T  53405605 atttttcatcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 5101284 - 5101404
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| |||| ||||||||||||||||||||||||| ||    
T  5101284 tgttttctccctttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgatccacacatcaagtttgttattggtgtg 5101382  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||| ||||||||||| |||||    
T  5101383 ttttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 6765210 - 6765336
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||| ||||||| |||||||||   |||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||||||    
T  6765210 tctcgccgttgttttctacttt-ggcttgtatttataatt---ccatacactttg-ttttggttgcttgattatcccttactccacacatcaagtttgtt 6765304  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||||||||||||||| ||||||    
T  6765305 attggtgtgatttttcatcgaattcacaacag 6765336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 31849554 - 31849439
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||     
T  31849554 ttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga- 31849460  T
Q  154 ttttcatcgaattcgcaacag 174  Q
    |||||||||||||||||||||    
T  31849459 ttttcatcgaattcgcaacag 31849439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 2484840 - 2484714
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  2484840 tctcgccgttgttttctacttttggcttgtattta--attgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaag-ttgtt 2484745  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||| ||||||    
T  2484744 attggtgtga-ttttcatcgaattcacaacag 2484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 5635443 - 5635317
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||  |||||||| |||||||||||||||||| |||||    
T  5635443 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgattgattatcccttgctccacacatcaag-ttgtt 5635348  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||||||||||    
T  5635347 attggtgtga-ttttcatcgaattcgcaacag 5635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 9148608 - 9148727
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||     
T  9148608 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgttccacacatcaag-ttgttattggtg 9148703  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    || ||| |||||||||||||||||    
T  9148704 tgttttctcatcgaattcgcaaca 9148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 14633684 - 14633811
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| ||| |||||| ||||||||||||||||||||||||||| |||||    
T  14633684 tctcgccgttgttttctacttttggcttgtattta--attgttccatacattttg-tttcggttgcttgattatctcttgctccacacatcaag-ttgtt 14633779  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||| |||||||||||| |||||    
T  14633780 attggtgtgatttctcatcgaattcggaacag 14633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16931757 - 16931631
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||| | |||||| |||||||||||||| ||||| |||    
T  16931757 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatcccttgctccacacattaagtt-gtt 16931662  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  16931661 attggtgtgatttttcatcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 22780339 - 22780212
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||| | ||||||| | |   |||||||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  22780339 tctcgccgttgttttctacttttggcttatatttataactttg--atacgctttgtttttggttgcttaattatcccttgctccacacatcaag-ttgtt 22780243  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  22780242 attggtgtgatttttcatcgaattcgcaaca 22780212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 44599805 - 44599680
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||||||||||| |||||||||| | |||||| |||||||||||||||||||| |||    
T  44599805 tctcgccgttgttttctacttttgccttgtattta--attattccatacgctttg-ttttggttgcttaattatc-cttgctccacacatcaagtt-gtt 44599711  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  44599710 attggtgtgatttttcatcgaattcgcaaca 44599680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 4215623 - 4215792
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||| |||  |||||| | |||||||||| |||   |||||||||||||||||| ||||||||||| ||||| ||||| ||    
T  4215623 ccgaactgggtcaacaaattcttttgtgttctctttcttttctctcgcagtt---ttctacttttggcttgtgattataattgtttcatacactttg-tt 4215718  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaaca 173  Q
    || ||||| |||||||  |||||| ||||||||||| |||||||| || |||  ||| |||||||||||||||||    
T  4215719 tttgttgcttgattattccttgcttcacacatcaag-ttgttatttgtgtgagttttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3937290 - 3937126
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  |||||||||||||| | |||||||||   ||||||||||||||||  ||||| || ||  | |||||||| |||||     
T  3937290 ccgaactgggtcaacaaattcatttgtgttctctctttc-tttctctcg---ttgttttctacttttgt-ttgtgatttta--tcttccatacactttg- 3937199  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  3937198 -tttggttgcttgattatcccttgctcctcacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 24348567 - 24348692
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||||||||| ||||   ||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  24348567 tctcgccgttgttttctatttttggcttgtatttag--ttgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 24348662  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  24348663 attggtgtga-ttttcatcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 26085944 - 26085818
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  26085944 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgtt 26085848  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| || |||||||||||||||||    
T  26085847 attggtgtga-ttctcatcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 47210755 - 47210637
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||| |    
T  47210755 ttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgctttattatctcttgctccacacatcaag-ttgttattggtgt 47210660  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    |||||  || |||||||||||||    
T  47210659 gatttcacaacgaattcgcaaca 47210637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36378610 - 36378777
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||| ||  |||||||||||||  ||||||   ||| |||||||||||||| | ||||||||||||||||| ||||| |||||     
T  36378610 ccgaactgggtaaacaaattattttgtgttctctcttct-tttctc---ctgctgttttctacttttcgtttgtgtttataattgtttcatacactttg- 36378704  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| |||||||  ||||||||||| ||||||| | |||||||| ||| ||||||||||||||||||||    
T  36378705 -tttggttgcttgattattacttgctccacatatcaagtattttattggtgtga-ttttcatcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 22046646 - 22046526
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||     
T  22046646 gttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 22046551  T
Q  150 tgatttttc-atcgaattcgcaaca 173  Q
    ||||||||| ||||||||| |||||    
T  22046550 tgatttttcgatcgaattcacaaca 22046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 8631374 - 8631260
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| |||| ||||| |||||||| |||||||||||||||||| ||||||||||| |||     
T  8631374 ttttctacttttggcttgtattta--attgttccatacactttg-ttttagttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 8631280  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  8631279 ttttcatcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 51015611 - 51015722
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  51015611 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 51015706  T
Q  143 attggtatgatttttc 158  Q
    |||||| || ||||||    
T  51015707 attggtgtgttttttc 51015722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22044407 - 22044230
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttct----ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||  ||| |    ||||| ||||||||||||||||||||||| ||||  |||||| ||||| |    
T  22044407 ccgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgccgttgttttctacttttggcttgtattta--attgtttcatacac 22044310  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc-atcgaattcgcaacag 174  Q
    |||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||||| ||| ||||| ||||||    
T  22044309 tttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgttatttttcgatcaaattcacaacag 22044230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 56030828 - 56030945
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||  |||| ||||||| |  ||||||| ||||| |||||||||| ||| |||||||||||||||| ||||||||| |||||||| ||    
T  56030828 tgttttctacttttgt-ttgtatttataact--tccatacactttg-ttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtg 56030923  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||    
T  56030924 atttttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 9176429 - 9176315
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||| |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||     
T  9176429 ttttctacttttggcttgtattta--attattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 9176335  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||||    
T  9176334 ttttcgtcgaattcgcaaca 9176315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 47275042 - 47275185
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||| ||||||||||||||||  ||||||| |||||   ||||||||||||||   ||||||||||||||||||||||||||| ||| |||| |||      
T  47275042 ccgaaccgggtcaacaaattcttttgtgttcttctcttga-tttctctcgctgtt---ttctacttttggcttgtgtttataattattctatacacttc- 47275136  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||||||    
T  47275137 attttgattgcttgattatcccttactccacacatcaagtttgttattg 47275185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 18409309 - 18409192
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga- 152  Q
    ||||||||||||| |||||| |||||| |  ||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||| |||||||| |||     
T  18409309 ttttctacttttgtcttgtgattataact--tccatacactttg-ttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgat 18409213  T
Q  153 tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| |||||    
T  18409212 tttttcatcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 5198781 - 5198895
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  ||||||||||||||||| || |||||||| |||     
T  5198781 ttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaag-ttattattggtgtga- 5198875  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||||||||||||| |||||    
T  5198876 ttttcatcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 7941697 - 7941815
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||| ||||| |||   |||||||||||| ||||| |||||||||| | |||||| |||||||||||||||||| ||||| ||||| |    
T  7941697 ttgttttctacttttgccttgtatttc--attgttccatacactttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttgttggtgt 7941792  T
Q  151 gatttttcatcgaattcgcaacag 174  Q
    || |||||||||||||||||||||    
T  7941793 ga-ttttcatcgaattcgcaacag 7941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 9174101 - 9173987
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||| || ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||| || |||     
T  9174101 ttttctacttttggcttgtattta--attatttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattagtgtga- 9174007  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  9174006 ttttcatcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 11006209 - 11006094
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| || |    
T  11006209 ttttctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 11006114  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||  ||||||||| |||||    
T  11006113 tttcgatcgaattcacaaca 11006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 11008523 - 11008408
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| || |    
T  11008523 ttttctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 11008428  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||  ||||||||| |||||    
T  11008427 tttcgatcgaattcacaaca 11008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 22132340 - 22132248
Alignment:
Q  59 tacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatt 154  Q
    |||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||    
T  22132340 tacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 38409570 - 38409696
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| |||| ||||| |||||||| |||||||||||||||||| |||||    
T  38409570 tctcgccgttgttttctacttttggcttgtattta--attgttccatacaatttg-ttttagttgcttgattatcccttgctccacacatcaag-ttgtt 38409665  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| || ||||  || |||||| |||||    
T  38409666 attggtgtgtttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 36380668 - 36380827
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||||||| |||||||||||  |||||||||||||  ||||||   ||  |||||||||||||||||||||||||||||||||| ||||| |||||      
T  36380668 cgaactgggtaaacaaattcttttgtgttctctcttct-tttctc---cttctgttttctacttttggcttgtgtttataattgtttcatacactttg-- 36380761  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    |||| |||| |||| ||  ||| ||||||||||||| | | |||||||| ||| |||||||||||||    
T  36380762 tttgattgcttgatcattacttactccacacatcaaatattttattggtgtga-ttttcatcgaatt 36380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16934111 - 16933988
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| ||||||||||||   |||||||||| | |||  | |||||||||||||| ||||| |||    
T  16934111 tctcgccgttgttttctacttttggcttgtattta--attattccatacgcttg--ttttggttgcttaatt--cccttgctccacacattaagtt-gtt 16934019  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  16934018 attggtgtgatttttcatcgaattcacaaca 16933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 18847518 - 18847628
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  ||| |||||||| |||||  ||||||||| |||||||| |||||||||||||||||| ||||    
T  18847518 tctcgccgttgttttctactttttggcttgtattta--attattccatacactttg--tttggttgcttgattatcccttgctccacacatcaag-ttgt 18847612  T
Q  142 tattggtatgattttt 157  Q
    ||||||| ||||||||    
T  18847613 tattggtgtgattttt 18847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 5664576 - 5664722
Alignment:
Q  23 tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttg 122  Q
    ||||||||||||| | ||||||||| |  |||||||||||||||| ||||  ||||||   |||||||| ||||| |||||||||| |||||||  | |     
T  5664576 tgtgttctctctttcttttctctcgttaatgttttctacttttggtttgtcattataa--cttccatacactttg-ttttggttgcttgattattacctt 5664672  T
Q  123 ctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| | |||||||| ||| |||||||||||||| |||||    
T  5664673 ctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 38890240 - 38890090
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||||||||   ||||| ||||| ||||||||||||| |  ||||||| |||||      
T  38890240 ccgaactgggtaaacaaatttcgtgtgttctctctttcttttctctcgctgtt---ttctaattttgccttgtgtttataact--tccatacactttg-- 38890148  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    |||||||||  ||||||  ||||||||||| ||||| | | |||||||| ||||||||    
T  38890147 tttggttgctagattattccttgctccacatatcaaatattttattggtgtgattttt 38890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 18709130 - 18709003
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||| ||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||  |||||||||||||||||| |||||    
T  18709130 tctcgccgttgttttctactattggcttgtatttataacttt--catacactttg-ttttggttgcttgattatgccttgctccacacatcaag-ttgtt 18709035  T
Q  143 attggtat-gatttttcatcgaattcgcaaca 173  Q
    |||||| | | ||||||||| ||||| |||||    
T  18709034 attggtgtggttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 22134567 - 22134476
Alignment:
Q  59 tacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatt 154  Q
    |||||||||||||| ||||  |||||||||||| ||||| |||||||||  |||||||| |||||||||||||||||| ||||||||||| |||||    
T  22134567 tacttttggcttgtattta--attgttccatacactttg-ttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 41997858 - 41997968
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||  ||||| |||||| |  ||||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||| |||||||| ||    
T  41997858 tgttttctacttttgt-ttgtgattataact--tccatacactttg-ttttggttgcttgattatcactttctccacacatcaagtttattattggtgtg 41997953  T
Q  152 atttttcatcgaatt 166  Q
     ||||||||| ||||    
T  41997954 ttttttcatcaaatt 41997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18534847 - 18534689
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||| |||| |||||||| | ||||||||||||| | ||||||||||| ||   |||||||||||  |||||||||||| |  ||||||| ||||| |    
T  18534847 ccgaacagggtaaacaaatttcgtgtgttctctctttc-tttctctcgctatt---ttctacttttgt-ttgtgtttataact--tccatacactttg-t 18534756  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||||| |||||||  ||||||||||||||||||| | |||||||| |||  |||||||||||||    
T  18534755 tttggttgcttgattattacttgctccacacatcaagtattttattggtgtga-gtttcatcgaattc 18534689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 19096298 - 19096370
Alignment:
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||| ||| ||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  19096298 ttggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgcaaca 19096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 38270091 - 38269995
Alignment:
Q  72 tgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||||   ||| |||||||||| ||| |||| ||| |||||||||||||||||||||||||| || ||||  ||||||||| |||    
T  38270091 tgtttataattgttccatac---ttg-ttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtg-ttttctatcgaattcccaa 38269997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 619464 - 619298
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||| ||  |||||||||||| |  |||||| |||||||||||||||||||| |||||| |||||| |||   || | |||  |    
T  619464 ccgaactgggtcaacaaattattttgtgttctctctttc--ttctct-gctgttgttttctacttttg-cttgtgattataactgtg--atccacttgta 619371  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||| ||| |||| ||| ||||||||||||| ||| |||||||| || ||| ||||||||| |||||||    
T  619370 tt--ggttgcttgactatcccttactccacacatcaaatttattattggtgtgttttctcatcgaatccgcaaca 619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 19323061 - 19323177
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||| |||||||| || |||||||||| |  ||||||| |||| ||||| ||||| |||||||  ||||||||||||||||||| | |||||||| ||    
T  19323061 tgttttatacttttg-ctcgtgtttataact--tccatacacttt-attttagttgcttgattattacttgctccacacatcaagtattttattggtgtg 19323156  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    | |||||||||||||| |||||    
T  19323157 a-ttttcatcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 8756265 - 8756103
Alignment:
Q  2 cgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||| |||||||| | ||||||||||||| | |||||||||   ||||||| |||||||| ||||||||||||| |||  |  ||   ||| ||    
T  8756265 cgaactgggtaaacaaattttgtgtgttctctctttc-tttctctcg---ttgttttttacttttg-cttgtgtttataactgtcacccac---ttg-tt 8756175  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||  ||||||||||||||||||| | |||||| | ||| |||||||||||||| |||||    
T  8756174 ttggttgcttgattattacttgctccacacatcaagtattttattgatgtga-ttttcatcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 18311275 - 18311215
Alignment:
Q  114 tatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||| |||||    
T  18311275 tatcacttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 22295485 - 22295646
Alignment:
Q  3 gaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||| |||||||| | ||||||||||||||| ||||||||||||||   |||||| |||| ||||||||||||||||||||   | |  |||| |    
T  22295485 gaactgggtaaacaaatttcatgtgttctctcttcc-tttctctcgctgtt---ttctacctttg-cttgtgtttataattgttcc---cacactgatat 22295576  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| | ||||||  | |||||| | ||||||||| | |||||||| |||||||| | ||||||| |||||    
T  22295577 tggttacttgatta--ttttgctctagacatcaagtattttattggtgtgattttttaacgaattcacaaca 22295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 12102450 - 12102566
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||| |||||||| ||||||||||||| |  ||||||| ||||| ||||||||||  | ||||  |||||||||||||||||||   |||||||| ||    
T  12102450 tgttttttacttttg-cttgtgtttataact--tccatacactttg-ttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtg 12102545  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    | |||||||||||||| |||||    
T  12102546 a-ttttcatcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 25357963 - 25358042
Alignment:
Q  4 aactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc 87  Q
    |||||||| |||||||| ||||||  |||||   ||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  25357963 aactgggtaaacaaatttttgtgtgttctctcttctttctctcg---ttgttttctacttttg-cttgtgtttataattgttcc 25358042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16455559 - 16455591
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctc 33  Q
    |||||||||||||||||||||||||||||||||    
T  16455559 ccgaactgggtcaacaaattcttgtgttctctc 16455591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 18537489 - 18537360
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | || |||||||||| | |||||||||   ||||||| ||||||||  |||||||||||| |  ||||||| ||||| |    
T  18537489 ccgaactgggtaaacaaattttgtgcgttctctctttc-tttctctcg---ttgttttatacttttgt-ttgtgtttataact--tccatacactttg-t 18537398  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagt 137  Q
    |||| |||| |||||||  |||||||||||||||||||    
T  18537397 tttgattgcttgattattacttgctccacacatcaagt 18537360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 30136890 - 30136945
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataa 80  Q
    |||||||||||||| | |||||||   ||||||||||||||||||| ||||||||||||    
T  30136890 ttgtgttctctctttcttttctct---tgttgttttctacttttggtttgtgtttataa 30136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 31983501 - 31983390
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||  ||||||||||||||||||||   | | ||||| |||||||| ||||||  | |||||||||||||||| | | |||||| |     
T  31983501 gttgttttctactttta-cttgtgtttataattgttcc---cacgttgatattggttgcttgatta--ttttgctccacacatcaaatattttattgatg 31983408  T
Q  150 tga-tttttcatcgaatt 166  Q
    ||| ||||||||||||||    
T  31983407 tgattttttcatcgaatt 31983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 47150889 - 47150783
Alignment:
Q  19 ttcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatct 118  Q
    ||||||||||||||||| | |||||||||   |||| |||||||||||  |||||||||||||||||||   | | |||||||||||||| |||||| ||    
T  47150889 ttcttgtgttctctctttc-tttctctcg---ttgtcttctacttttgt-ttgtgtttataattgttcc---cacattgattttggttgcttgatta-ct 47150799  T
Q  119 cttgctccacacatcaa 135  Q
     ||||||||||||||||    
T  47150798 -ttgctccacacatcaa 47150783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15073030 - 15073202
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  15073030 ccgaactgggtcaacaaattattttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg- 15073127  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| |||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15073128 ttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41382981 - 41383154
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||     
T  41382981 ccgaactaggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttg- 41383079  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  41383080 ttttgattgcttgattatctcttgctccacacatcaagtttgttattggtgtggtttttcatcgaactcgcaaca 41383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28251583 - 28251410
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||     
T  28251583 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttg- 28251485  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||    
T  28251484 ttttggttgcctgattattccttgctccacacatcaag-ttgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41385063 - 41385233
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||      
T  41385063 ccgaactgggtcaacaaattcttttctgttctctcttccatttctctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttg 41385162  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||||||| ||||||||||    ||||||||||||| || ||||||||||| ||||||||||||    
T  41385163 ttttggttgtttgattatcccttgctccac----caagtttgttatttgtgtgatttttcatggaattcgcaaca 41385233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 15068302 - 15068472
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||| ||||||||||||  |||||| | ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  15068302 gaactgggccaacaaattcttttgtgttcacccttct-tttctctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttg-tt 15068399  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15068400 ttggttgcttgactatcccttgttccacacatcaagtttgttgttggtgtgatttttcatcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 14808080 - 14808252
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||     
T  14808080 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gttgttttctacttttggcttgtgtttataattgtttcatacactttg- 14808176  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  14808177 ttttggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgattttttcatcgaatgcgcaaca 14808252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14419206 - 14419035
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||||||| |||||||||||||||||||||||| |||||     
T  14419206 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacactttg- 14419110  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||||| || ||| ||||||||||| |||||    
T  14419109 ttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 18811075 - 18811202
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    ||||||||| |||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18811075 tctcgctgtcgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgtt 18811171  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  18811172 attggtgtgatttttcatcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 37214280 - 37214109
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||     
T  37214280 ccgaactgggtcaacaaattcttttgtgttttctcttcc-tttctctctc-gttgttttctacttttggcttgtgtttataattgttctatacactttg- 37214184  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| || ||||||||| ||||| |||||||||||||||||||| || ||| ||||| ||||| |||||    
T  37214183 ttttggttgcttgcttatctcttactccatacatcaagtttgttattggtgtgttttctcatcaaattcacaaca 37214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35872469 - 35872301
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||    |||||||||||||||||||||||||||||||| |||||||| |||| |    
T  35872469 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctc----ttgttttctacttttggcttgtgtttataatttttccatacacttt-a 35872376  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||| || ||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  35872375 ttttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 33541403 - 33541253
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | || ||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||    
T  33541403 ttgtgttctctcttcc-tttctctctc-gctgatttctacttttggcttgtgtttataattgttccatacacttt-attttgattgcttgattatccctt 33541307  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
     |||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  33541306 actccacacatcaagtttgttattggtgtgatttttgatcgaattcacaacaga 33541253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 18813249 - 18813378
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| || |||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| |||||    
T  18813249 tctcgccgtcgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctctacatatcaag-ttgtt 18813345  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| ||||||||||||||||||||||||||    
T  18813346 attggtgtgatttttcatcgaattcgcaacaga 18813378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25952840 - 25953010
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||| | |||||||||| |||   |||||||||||| ||||||||||||||| | ||||| |||| |    
T  25952840 ccgaactaggtcaacaaattcttttgtgttctctctttcttttctctcgccgtt---ttctacttttggattgtgtttataattgcttcatacacttt-a 25952935  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  25952936 ttttggttgcttgattatcactttctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 22684620 - 22684491
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22684620 tctcgccgttgttttctacttttggcttgtattta--attgttccataaactttgattttggttgcctgattatcccttgctccacacatcaag-ttgtt 22684524  T
Q  143 attggtatgattttt--catcgaattcgcaaca 173  Q
    |||||| ||||||||  ||||||||||||||||    
T  22684523 attggtgtgattttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 13858498 - 13858341
Alignment:
Q  3 gaactgggtcaacaaattctt-gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||| ||||||||||| |||||||| ||| | |||||||| |||||   ||||||||||||||||||||||||| |  ||||||| ||||| |||    
T  13858498 gaactgggtaaacaaattctttgtgttctccctttc-tttctctcactgtt---ttctacttttggcttgtgtttataact--tccatacactttg-ttt 13858406  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13858405 tggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgatttttcatcgaatt 13858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 14477630 - 14477740
Alignment:
Q  62 ttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatc 161  Q
    ||||||||||||||||| |||||| ||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  14477630 ttttggcttgtgtttatgattgtttcatacactttg-ttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 14477728  T
Q  162 gaattcgcaaca 173  Q
    |||||| |||||    
T  14477729 gaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 30480519 - 30480352
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||||||||||||| |||||||||||||||||| |||||     
T  30480519 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtatttataattgttccatacactttg- 30480423  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcg 168  Q
    |||||||||| |||||||  ||| ||||||||||||| |||||||||||| | ||||| |||| |||||||    
T  30480422 ttttggttgcttgattattccttactccacacatcaaatttgttattggtgtcattttctcattgaattcg 30480352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 43530491 - 43530609
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |    
T  43530491 ttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgt 43530586  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||    
T  43530587 gatttttcattgaattcgcaaca 43530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 36865856 - 36866002
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||||| ||||||||||  |||||||| ||||   ||||| || || ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  36865856 ccgaactgggtaaacaaattctcttgtgttctgtctttt-tttctttctctcgttgttttctacttttggcttttgtttataattgttccatacactttg 36865954  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
     |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  36865955 -ttttggttgcttgattatcacttgctccacacatcaagtttgttattg 36866002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 3874361 - 3874487
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| || |||||||||||||||||||||||| |||||    
T  3874361 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttggttatctcttgctccacacatcaag-ttgtt 3874456  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||| ||||||| |||||    
T  3874457 attggtgtgatttttcaacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 3883562 - 3883436
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  ||||||||||||||||||| |||    
T  3883562 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtt-gtt 3883467  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||| | ||||||||||||||||||||||||    
T  3883466 attgatgtgatttttcatcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 27827353 - 27827479
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  27827353 tctcgccgttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgtt 27827449  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  27827450 attggtgtga-ttttcatcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 28283188 - 28283062
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||  || || ||||| ||||| |||||||||| |||||||| |||||||||||||||||||| |||    
T  28283188 tctcgccgttgttttctacttttggcttgtatttat--ttttttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gtt 28283093  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  28283092 attggtgtgatttttcatcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 27829664 - 27829791
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||| | ||||  |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  27829664 tctcgccgttgttttctacttttgacttatattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgtt 27829760  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||||||||||    
T  27829761 attggtgtga-ttttcatcgaattcgcaacag 27829791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 4424386 - 4424512
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| ||||||||||||| |||| |||||    
T  4424386 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacaccaag-ttgtt 4424482  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  4424483 attggtgtga-ttttcatcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 32339677 - 32339803
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||| ||||||||||||| ||||| ||||  |||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  32339677 tctcgccgttattttctacttttgacttgtattta--attgttccatacactttgattttggttgcttgattatcccttgccccacacatcaag-ttgtt 32339773  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  32339774 attggtgtga-ttttcatcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 15809586 - 15809714
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||| ||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  15809586 tctcgccgttgttttctatttttgccttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 15809681  T
Q  143 attggtatgatttttcatcgaattcgcaacagaa 176  Q
    |||||| ||| |||||||||||||||||||||||    
T  15809682 attggtgtga-ttttcatcgaattcgcaacagaa 15809714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21482630 - 21482798
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-ga 98  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||||   |||||||||||||| | ||||| ||||||   |||||||| ||||       
T  21482630 ccgaactgggtaaacaaatttcgtgtgttctctctttcttttctctcgc---tgttttctactttt-gtttgtgattataa--cttccatacactttatt 21482723  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  21482724 ttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 24873167 - 24873038
Alignment:
Q  43 tctcgctgttgttttctac-ttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||| ||||||||||| ||||||| | |  ||||| ||||| |||||||||| | |||||| |||||||||||||||||| ||||    
T  24873167 tctcgccgttgttttctaccttttggcttgtatttataacttt--catacactttgtttttggttgcttaattatcccttgctccacacatcaag-ttgt 24873071  T
Q  142 tattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||| |||||||||||||||||| ||||||    
T  24873070 tattggtgtgatttttcatcgaattcacaacag 24873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 27911447 - 27911567
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||| | ||  || |||||| ||||||||||||||||||||| ||||||||     
T  27911447 gttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagttt--ctaattatcacttgctccacacatcaagttttttattggtg 27911543  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | ||||| |||||    
T  27911544 tgatttttcaacaaattcacaaca 27911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 27957866 - 27957986
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||| | ||  || |||||| ||||||||||||||||||||| ||||||||     
T  27957866 gttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagttt--ctaattatcacttgctccacacatcaagttttttattggtg 27957962  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | ||||| |||||    
T  27957963 tgatttttcaacaaattcacaaca 27957986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 5372148 - 5372042
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||||||||| |||||||| ||||||||||  ||| ||||| ||||| ||| ||||  ||||||||||||||||||||||||||| | |    
T  5372148 ttgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgt 5372049  T
Q  151 gattttt 157  Q
    |||||||    
T  5372048 gattttt 5372042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 181798 - 181901
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||| ||||| |||||     
T  181798 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgtttataattgtttcatacactttg- 181892  T
Q  99 ttttggttg 107  Q
    |||||||||    
T  181893 ttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 27106910 - 27106747
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||||||||||| ||  ||||| |||||| | |||||||||   |||||||||||||||| || ||| |||||| |  ||||||| ||||| |||    
T  27106910 aactgggtcaacaaattattttgtgttttctctttc-tttctctcg---ttgttttctacttttgtct-gtgattataact--tccatacactttg-ttt 27106819  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||| || ||| |||||||||| ||||||    
T  27106818 tggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaatttgcaaca 27106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 15185730 - 15185564
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||| |  |||||||||| | |||||||||   ||||||||||||||||  || || |||||| |  ||||||| |||||     
T  15185730 ccgaactgggtcaacaaattcttttttgttctctctttc-tttctctcg---ttgttttctacttttgt-ttatgattataact--tccatacactttg- 15185639  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||| |||||||||||||||||||||||| | |||||||||| ||||||| |||||    
T  15185638 ttttggttgcttgactatcccttactccacacatcaagtttgttattgatgtgatttttcaccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 609110 - 609230
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt-ggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||| |||||| ||||||||||||||||||| ||||||| |||||||||||    
T  609110 gttgttttctacttttggcttgtattta--attgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatcaag-ttgttattggt 609206  T
Q  149 atgatttttcatcgaattcgcaaca 173  Q
      || |||||||||||||| |||||    
T  609207 gcga-ttttcatcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 43082348 - 43082472
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| | |||||| |||||||||||||||||| |||||||||||     
T  43082348 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtg 43082443  T
Q  150 tgatttttcatcgaattcgcaacagaact 178  Q
    |||||||| |||  |||| ||||||||||    
T  43082444 tgatttttgatcagattcacaacagaact 43082472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 15956279 - 15956443
Alignment:
Q  3 gaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||| |||  |||||||||  |||||||||   |||||||||||||| |  ||||| |||||| | |  ||||| ||||| ||    
T  15956279 gaactgggtcaacaaattcttttgtattctctcttct-tttctctcg---ttgttttctactttcgt-ttgtgattataacttt--catacactttg-tt 15956370  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||  ||| |||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  15956371 ttggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 2468143 - 2467979
Alignment:
Q  3 gaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||| ||| |||||||| | ||||||||||||| | |||||||||   |||||||||| |||||  ||||| |||||| |  ||| ||| ||||| |||    
T  2468143 gaactaggtaaacaaatttcgtgtgttctctctttcttttctctcg---ttgttttctaattttgttttgtgattataact--tccctacactttg-ttt 2468050  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| ||| |||| ||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||    
T  2468049 tggttgcttgactatcacttgctccacacatcaagtttattattggtgtga-ttttcatcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 44721211 - 44721318
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  44721211 tctcgccgttgttttctacttttgacttgtattta--attattccatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgtt 44721306  T
Q  143 attggtatgatt 154  Q
    |||||| |||||    
T  44721307 attggtgtgatt 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 21480838 - 21480990
Alignment:
Q  16 aaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt-ggttgcctgatt 114  Q
    |||||| ||||||||||||| | |||||||||   ||||||||| ||||||  ||||| |||||| |  ||||||| ||||| |||| |||||  |||||    
T  21480838 aaattcgtgtgttctctctttcttttctctcg---ttgttttcttcttttgt-ttgtgattataact--tccatacactttgttttttggttgtttgatt 21480931  T
Q  115 atctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     || ||| ||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  21480932 gtcacttactccacacatcaagtttattattggtgttatttttcatcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31162532 - 31162683
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | |||||||||| ||  |||| |||| | ||||||||||||||||||||||| |||||||   |||||||| ||||| |    
T  31162532 ccgaactgggtaaacaaatttcgtgtgttctcttttttcttt-tctctc-gttgttttctacttttggcttgtatttataa--cttccatacactttg-t 31162626  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt 156  Q
    ||||||| | | |||||  ||||||||||||||||||| | |||||||| |||||||    
T  31162627 tttggttacttaattattacttgctccacacatcaagtattttattggtgtgatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 43079970 - 43080080
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| |||||||   || ||||| ||||| |||||||||| | ||||||  ||||||||||||||||| |||||    
T  43079970 tctcgccgttgttttctacttttgacttgtatttataa--ctttcatacactttg-ttttggttgcttaattatccattgctccacacatcaag-ttgtt 43080065  T
Q  143 attggtatgattttt 157  Q
    |||||| ||||||||    
T  43080066 attggtgtgattttt 43080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1225486 - 1225568
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgtt 85  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||   ||||||||||| ||||||||||||||||||    
T  1225486 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttgacttgtgtttataattgtt 1225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 183251 - 183310
Alignment:
Q  114 tatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  183251 tatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 31578292 - 31578148
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgtt--ccatacgctttga 98  Q
    ||||||||||| |||||||| |||||| ||||||   ||||||||||   |||||||||||||||| ||||||||||||||||||  |||||    ||||    
T  31578292 ccgaactgggtaaacaaatt-ttgtgtgctctct---ctttctctcg---ttgttttctacttttg-cttgtgtttataattgttgcccata----ttga 31578205  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    | |||||||| ||||||  | ||||| |||||||||||| | ||||| || ||||||||    
T  31578204 tattggttgcttgatta--ttttgctacacacatcaagtattttattcgtgtgattttt 31578148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 3005572 - 3005486
Alignment:
Q  84 ttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||  ||||||||  |||||||  ||||||||||||||||||| | |||||||| ||| |||||||||||||| |||||    
T  3005572 ttccatacactttg--tttggttgtttgattattacttgctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 2467932 - 2467887
Alignment:
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||    
T  2467932 ttgctccacacatcaagtttattattggtgtga-ttttcatcgaatt 2467887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 31035440 - 31035587
Alignment:
Q  1 ccgaactgggtcaacaaa-ttcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||| ||| |||||||||||||  |||||||||||   ||||||||| |||| |||||||||| ||||||||||   | | |||||    
T  31035440 ccgaactgggtaaacaaatttcgtgtgttctctctt-tctttctctcgc---tgttttctagtttt-gcttgtgtttttaattgttcc---cacgttgat 31035531  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
     |||||||| ||| ||    || ||||||||||||||| | |||||||| ||||||||    
T  31035532 attggttgcttgacta--atttcctccacacatcaagtattttattggtgtgattttt 31035587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 1225571 - 1225619
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattgg 147  Q
    |||||||||| |||||||  |||| |||||||||||||| |||||||||    
T  1225571 ttttggttgcttgattattccttgttccacacatcaagtatgttattgg 1225619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 111; Significance: 9e-56; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 50289 - 50457
Alignment:
Q  4 aactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  50289 aactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 50386  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50387 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 52288 - 52456
Alignment:
Q  4 aactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  52288 aactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 52385  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52386 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 183608 - 183481
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| ||| |||||| ||||||||||||||||||||||||||| |||||    
T  183608 tctcgccgttgttttctacttttggcttgtattta--attgttccatacattttg-tttcggttgcttgattatctcttgctccacacatcaag-ttgtt 183513  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||| |||||||||||| |||||    
T  183512 attggtgtgatttctcatcgaattcggaacag 183481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14398 - 14231
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  14398 ccgaactgggtcaacaaattcttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg-tt 14302  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  14301 ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcacaaca 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 15393 - 15433
Alignment:
Q  127 acacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15393 acacatcaagtttgttattggtgtgatttttcatcgaattc 15433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 35866 - 36037
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||| ||  |||||||||||||  |||||||||||||||||||| | |||||||||||||||||||||||| ||||| |||||     
T  35866 ccgaattgggtcaacaaattattttgtgttctctcttct-tttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgt 35964  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  35965 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgcaa 36037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 85526 - 85671
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||  |||||||||   |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  85526 ttgtgttctctcttct-tttctctcg---ttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctctt 85621  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  85622 gctccacacattaagattgttattggtgtgatttttcatcgaattcgcaa 85671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 11489 - 11315
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-g 97  Q
    |||||| ||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||      
T  11489 ccgaaccgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttat 11390  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaac 172  Q
     |||| ||||| | |||||  ||| |||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  11389 tttttcgttgcttaattattccttactccacacatcaag-ttgttattggtgtgatattttcatcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 6520 - 6646
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||| |||   ||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  6520 tctcgccgttgttttctacttttggcttgtatttattatt---ccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 6615  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  6616 attggtgtgatttttcatcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 357 - 473
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  357 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 453  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    || ||| ||||||| |||||    
T  454 ttctcaacgaattcacaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 69259 - 69132
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  |||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  69259 tctcgccgttgttttctacttttggcttgtatttataact--tccatacattttg-ttttggttgcctgattatcccttgctccacacatcaagtttgtt 69163  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||| ||||||    
T  69162 attggtgtga-ttttcatcgaattcacaacag 69132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 1418 - 1298
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||| || |||||||||||||| |||||    
T  1418 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctttttctccacacatcaag-ttgtt 1323  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    |||||| ||||||||||||||||||    
T  1322 attggtgtgatttttcatcgaattc 1298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 41448 - 41325
Alignment:
Q  45 tcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttat 144  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  41448 tcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttgattgcttgattatctcttgctccacacatcaag-ttgttat 41353  T
Q  145 tggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||| |||||||||||||| |||||    
T  41352 tggtgtga-ttttcatcgaattcacaaca 41325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 29498 - 29617
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||| | ||||  |||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||     
T  29498 gttgttttctacttttggcttttattta--attgttccatacactttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtg 29593  T
Q  150 tgatttttcatcgaattcgcaacag 174  Q
    ||| |||||||||||||||||||||    
T  29594 tga-ttttcatcgaattcgcaacag 29617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 24723 - 24839
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  24723 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 24819  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  24820 ttttcgtcgaattcacaaca 24839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 22448 - 22564
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| |||||| |||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  22448 ttttctacttttggctcgtatttt--attattccatgcgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 22544  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  22545 ttttcgtcgaattcacaaca 22564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 12841 - 12715
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||| |||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  12841 tctcgccgttgttgtctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 12746  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| | |||||||||||||||| |||||    
T  12745 attggtgtcatttttcatcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 1408 - 1309
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  1408 ttttctacttttggcttgtattta--attgttacatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgat 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4267 - 4410
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||| ||||||||||||||||  ||||||| |||||   ||||||||||||||   ||||||||||||||||||||||||||| ||| |||| |||      
T  4267 ccgaaccgggtcaacaaattcttttgtgttcttctcttga-tttctctcgctgtt---ttctacttttggcttgtgtttataattattctatacacttc- 4361  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||||||    
T  4362 attttgattgcttgattatcccttactccacacatcaagtttgttattg 4410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1657 - 1493
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||    ||||||||||||||||||||||||||||||   |||||||| |||||      
T  1657 ccgaactgggtaaacaaatttcgtgtgttctctctttcttttctctca---ttgttttctacttttggcttgtgtttataa--cttccatacactttg-- 1565  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||  ||||||||||||||||| | | |||||||| ||| ||||||| |||||| |||||    
T  1564 tttggttgcttgattattacttgctccacacatcaaatat-ttattggtgtga-ttttcattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 4636 - 4535
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||||||||  ||||||||||| |    
T  4636 ttgttttctacttttggcttgtatt--taattgttccatacgctttgacttt-gttgcttgattatcccttactccacacatcaa-attgttattggtgt 4541  T
Q  151 gatttt 156  Q
    ||||||    
T  4540 gatttt 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 3200 - 3319
Alignment:
Q  43 tctcgctgttgttttctacttttgg-cttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| | ||||| ||||||| | |  ||||| |||||  ||||||||| |||||||| |||||||||||||||||| ||||    
T  3200 tctcgccgttgttttctactttttgacttgtatttataacttt--catacactttg--tttggttgcttgattatcccttgctccacacatcaag-ttgt 3294  T
Q  142 tattggtatgatttttcatcgaattc 167  Q
    ||||||| ||| ||||||||||||||    
T  3295 tattggtgtga-ttttcatcgaattc 3319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 1 - 53
Alignment:
Q  111 gattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1 gattatctcttgctccacacatcaag-ttgttattggtgtgatttttcatcgaa 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16665 - 16501
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | |||||| |||||| | |||||||||   |||||||||| ||||| ||||| ||||||| |  ||||| | |||||      
T  16665 ccgaactgggtaaacaaattttgtgtgttttctctttcttttctctcg---ttgttttctatttttg-cttgtatttataact--tccatgcactttg-- 16574  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||| ||||| |||||||  ||||||||||||||||||| | |||||||||| |||||| ||||||||| |||||    
T  16573 tttagttgcttgattattacttgctccacacatcaagtattttattggtataattttt-atcgaattcacaaca 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University