View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12598_high_27 (Length: 439)

Name: NF12598_high_27
Description: NF12598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12598_high_27
NF12598_high_27
[»] scaffold0598 (1 HSPs)
scaffold0598 (17-385)||(6877-7243)
[»] chr4 (14 HSPs)
chr4 (337-386)||(26207364-26207414)
chr4 (337-386)||(22681578-22681628)
chr4 (337-385)||(48406386-48406435)
chr4 (337-386)||(25161881-25161932)
chr4 (337-386)||(28196349-28196400)
chr4 (337-386)||(28196773-28196824)
chr4 (337-386)||(32703650-32703701)
chr4 (337-386)||(56505696-56505747)
chr4 (337-386)||(3930480-3930530)
chr4 (337-386)||(23539844-23539893)
chr4 (337-386)||(48405965-48406015)
chr4 (337-383)||(9380744-9380792)
chr4 (347-386)||(26207746-26207786)
chr4 (399-427)||(39415483-39415511)
[»] chr1 (21 HSPs)
chr1 (337-386)||(9347551-9347601)
chr1 (337-388)||(1176720-1176772)
chr1 (337-386)||(44911028-44911079)
chr1 (337-386)||(17518602-17518652)
chr1 (337-386)||(20371353-20371403)
chr1 (337-386)||(27172119-27172169)
chr1 (337-382)||(49318170-49318216)
chr1 (337-374)||(19007738-19007775)
chr1 (337-385)||(20480613-20480662)
chr1 (337-386)||(8108993-8109044)
chr1 (337-386)||(9347129-9347180)
chr1 (337-386)||(32163043-32163094)
chr1 (337-386)||(39692000-39692051)
chr1 (337-386)||(47955309-47955360)
chr1 (337-386)||(50430081-50430132)
chr1 (337-386)||(13589659-13589709)
chr1 (337-386)||(20480171-20480221)
chr1 (337-375)||(49317755-49317793)
chr1 (337-386)||(50615621-50615671)
chr1 (337-386)||(50623449-50623499)
chr1 (337-383)||(46823846-46823894)
[»] chr3 (16 HSPs)
chr3 (337-385)||(8315083-8315132)
chr3 (337-386)||(42672981-42673031)
chr3 (337-387)||(20969018-20969070)
chr3 (337-386)||(47666335-47666386)
chr3 (337-386)||(48159900-48159951)
chr3 (337-386)||(48160333-48160384)
chr3 (337-383)||(53688306-53688353)
chr3 (337-386)||(1928434-1928484)
chr3 (337-386)||(3353131-3353181)
chr3 (337-386)||(22429596-22429646)
chr3 (337-386)||(24485460-24485510)
chr3 (337-386)||(26007185-26007235)
chr3 (337-386)||(40848524-40848574)
chr3 (337-386)||(42673296-42673346)
chr3 (337-386)||(47871122-47871172)
chr3 (341-384)||(3353553-3353597)
[»] chr6 (7 HSPs)
chr6 (336-386)||(3825529-3825580)
chr6 (337-386)||(29074372-29074422)
chr6 (337-386)||(29079136-29079186)
chr6 (337-386)||(29106945-29106995)
chr6 (337-388)||(10039679-10039731)
chr6 (337-382)||(30388065-30388111)
chr6 (347-386)||(33974299-33974339)
[»] chr2 (12 HSPs)
chr2 (332-386)||(16911269-16911324)
chr2 (337-386)||(19141447-19141497)
chr2 (337-386)||(5378664-5378715)
chr2 (337-386)||(8851151-8851202)
chr2 (337-386)||(17850981-17851032)
chr2 (337-386)||(20347464-20347515)
chr2 (337-386)||(30190926-30190977)
chr2 (337-386)||(37720207-37720258)
chr2 (337-386)||(41790912-41790963)
chr2 (337-386)||(32673143-32673193)
chr2 (337-382)||(43495609-43495655)
chr2 (337-388)||(6171454-6171507)
[»] scaffold0110 (1 HSPs)
scaffold0110 (337-386)||(45807-45857)
[»] scaffold0069 (1 HSPs)
scaffold0069 (337-386)||(50507-50557)
[»] chr5 (16 HSPs)
chr5 (337-386)||(22428937-22428987)
chr5 (337-386)||(22729440-22729490)
chr5 (337-385)||(9665828-9665876)
chr5 (347-386)||(11350822-11350861)
chr5 (337-386)||(12498570-12498621)
chr5 (337-386)||(12498928-12498979)
chr5 (337-386)||(21207229-21207280)
chr5 (337-386)||(26571164-26571215)
chr5 (337-386)||(34576870-34576920)
chr5 (337-386)||(37610205-37610255)
chr5 (337-386)||(37780323-37780373)
chr5 (337-386)||(43463759-43463809)
chr5 (337-386)||(19514528-19514580)
chr5 (337-384)||(31569910-31569958)
chr5 (337-384)||(37610620-37610668)
chr5 (337-384)||(43464194-43464242)
[»] chr7 (17 HSPs)
chr7 (337-385)||(6908485-6908534)
chr7 (337-374)||(27096050-27096087)
chr7 (337-374)||(27182216-27182253)
chr7 (328-386)||(10533028-10533088)
chr7 (337-386)||(3687656-3687707)
chr7 (337-386)||(9035293-9035344)
chr7 (337-386)||(9412325-9412376)
chr7 (337-386)||(20418891-20418942)
chr7 (337-386)||(37888836-37888887)
chr7 (337-386)||(37889259-37889310)
chr7 (337-386)||(37972396-37972447)
chr7 (337-386)||(3204672-3204721)
chr7 (337-386)||(13744233-13744283)
chr7 (327-384)||(18864404-18864462)
chr7 (337-386)||(22740591-22740641)
chr7 (337-379)||(42419037-42419079)
chr7 (337-386)||(48359323-48359373)
[»] chr8 (6 HSPs)
chr8 (337-386)||(765737-765788)
chr8 (337-386)||(25438795-25438846)
chr8 (337-386)||(41662403-41662454)
chr8 (337-386)||(13936726-13936776)
chr8 (337-384)||(12281127-12281176)
chr8 (337-384)||(43162237-43162285)
[»] scaffold0460 (1 HSPs)
scaffold0460 (337-386)||(763-813)
[»] scaffold0319 (1 HSPs)
scaffold0319 (337-386)||(6697-6747)
[»] scaffold0002 (1 HSPs)
scaffold0002 (337-386)||(411926-411976)
[»] scaffold0001 (1 HSPs)
scaffold0001 (337-386)||(183663-183713)
[»] scaffold0015 (1 HSPs)
scaffold0015 (337-384)||(17158-17206)


Alignment Details
Target: scaffold0598 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 17 - 385
Target Start/End: Complemental strand, 7243 - 6877
Alignment:
Q  17 gtatactggagttggagagtgttttcaagctctgttgatttcaagttgaaaagagtttaaggtttatataatgggaactgtgtggatgccatctaaacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      
T  7243 gtatactggagttggagagtgttttcaagctctgttgatttcaagttgaaaagagtttaaggtttatataatgggaactgtgtagatgccatctaaac-- 7146  T
Q  117 aagtttaacaagttcctaattaataatattgactggtggtcatgtaattatgatgttggcgatgtctgaaattaatgtaataatatgaaacaaaagtata 216  Q
     ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7145 -agtttaacaggttcctaattaataatattgactggtggtcaagtaattatgatgttggcgatgtctgaaattaatgtaataatatgaaaccaaagtata 7047  T
Q  217 aaatatagaaaatactaacatttgttcttaagggaaatattaatgattttattggtagaaatgtattaaaaattgtagcaannnnnnncactaaaag-tt 315  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||| ||    
T  7046 aaatattgaaaatactaacatttgttcttaagggaaatattaatgattttattggtagaaatgtattaaaaattgtagcaatttttttcactaaaagttt 6947  T
Q  316 gagcataaatattttctaagattaattgcactttcccccctatattttgccaattgtgcattttgcaccc 385  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6946 gagcataaatattttctaagcttaattgcactttcccccctatcttttgccaattgtgcattttgcaccc 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 26207364 - 26207414
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26207364 ttaattgcactttcccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 22681578 - 22681628
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  22681578 ttaattgcactttcccccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 48406435 - 48406386
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcaccc 385  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 25161881 - 25161932
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  25161881 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 28196349 - 28196400
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  28196349 ttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 28196824 - 28196773
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  28196824 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 32703701 - 32703650
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  32703701 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 56505696 - 56505747
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  56505696 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 3930530 - 3930480
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  3930530 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 3930480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 23539844 - 23539893
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  23539844 ttaattgcactttccccc-tatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 48405965 - 48406015
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||| ||| ||||||||||||    
T  48405965 ttaattgcacttttccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 9380792 - 9380744
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcac 383  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  9380792 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 26207786 - 26207746
Alignment:
Q  347 tttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  26207786 tttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 39415511 - 39415483
Alignment:
Q  399 cgattttgcactccatctttttgccccct 427  Q
    |||||||||||||||||||||||||||||    
T  39415511 cgattttgcactccatctttttgccccct 39415483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 9347601 - 9347551
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9347601 ttaattgcactttcccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 1176720 - 1176772
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccctc 388  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  1176720 ttaattgcactttcccccctatattttgctaattgtgcgattttgcatccctc 1176772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 44911028 - 44911079
Alignment:
Q  337 ttaattgcactttcccc-cctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  44911028 ttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 17518652 - 17518602
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  17518652 ttaattgcacttttccccctatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 20371403 - 20371353
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  20371403 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 20371353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 27172119 - 27172169
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  27172119 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Complemental strand, 49318216 - 49318170
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgca 382  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  49318216 ttaattgcactttcccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 19007738 - 19007775
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc 374  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19007738 ttaattgcactttcccccctatagtttgccaattgtgc 19007775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 20480662 - 20480613
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcaccc 385  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  20480662 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 8109044 - 8108993
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  8109044 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 9347129 - 9347180
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  9347129 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 32163094 - 32163043
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  32163094 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 39692051 - 39692000
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  39692051 ttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 47955309 - 47955360
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  47955309 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 13589709 - 13589659
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  13589709 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 20480171 - 20480221
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  20480171 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 49317755 - 49317793
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgca 375  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  49317755 ttaattgcacttttccccctatagtttgccaattgtgca 49317793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 50615671 - 50615621
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  50615671 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 50623499 - 50623449
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  50623499 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcac 383  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 8315132 - 8315083
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcaccc 385  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8315132 ttaattgcactttcccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 42672981 - 42673031
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  42672981 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 387
Target Start/End: Complemental strand, 20969070 - 20969018
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccct 387  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  20969070 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccct 20969018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 47666386 - 47666335
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  47666386 ttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 48159900 - 48159951
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  48159900 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 48160384 - 48160333
Alignment:
Q  337 ttaattgcactttcccccc-tatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  48160384 ttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 53688353 - 53688306
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcac 383  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||    
T  53688353 ttaattgcactttctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 1928484 - 1928434
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||| ||||| |||||| ||||||||||||||| ||||||||||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 3353131 - 3353181
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  3353131 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 22429646 - 22429596
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  22429646 ttaattgcactttccctcctatagtttgtcaattgtgcgattttgcacccc 22429596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 24485510 - 24485460
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| | ||||||| |||||||||||||| ||||||||||||    
T  24485510 ttaattgcacttttctccctatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 26007185 - 26007235
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||| ||||||||||||| |||| ||||||||| ||||||||||||    
T  26007185 ttaattgcattttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 40848524 - 40848574
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||    
T  40848524 ttaattgcacttttccccctatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 42673346 - 42673296
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  42673346 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 47871172 - 47871122
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  47871172 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 47871122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 3353597 - 3353553
Alignment:
Q  341 ttgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 3825529 - 3825580
Alignment:
Q  336 attaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  3825529 attaattgcacttttccccctatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 29074422 - 29074372
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  29074422 ttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 29079186 - 29079136
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  29079186 ttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 29106995 - 29106945
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  29106995 ttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 10039679 - 10039731
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccctc 388  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||||||||    
T  10039679 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctc 10039731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 30388065 - 30388111
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgca 382  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||    
T  30388065 ttaattgcactttcccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 33974339 - 33974299
Alignment:
Q  347 tttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  33974339 tttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 16911324 - 16911269
Alignment:
Q  332 taagattaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  16911324 taagcttaattgcactttcgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 19141447 - 19141497
Alignment:
Q  337 ttaattgcactttc-ccccctatattttgccaattgtgcattttgcacccc 386  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  19141447 ttaattgcactttttccccctatagtttgccaattgtgcattttgcacccc 19141497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 5378664 - 5378715
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  5378664 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 8851151 - 8851202
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 17850981 - 17851032
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  17850981 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 20347515 - 20347464
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  20347515 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 30190926 - 30190977
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  30190926 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 37720207 - 37720258
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  37720207 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 41790963 - 41790912
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  41790963 ttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 32673193 - 32673143
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcacccc 32673143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 382
Target Start/End: Complemental strand, 43495655 - 43495609
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgca 382  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  43495655 ttaattgcactttcccacctatattttgctaattgtgcgattttgca 43495609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 6171507 - 6171454
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgt-gcattttgcacccctc 388  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||||||||||||    
T  6171507 ttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccctc 6171454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 45857 - 45807
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  45857 ttaattgcacttttccccctatcttttgccaattgtgcgattttgcacccc 45807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 50557 - 50507
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  50557 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 50507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 22428937 - 22428987
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  22428937 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 22729490 - 22729440
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  22729490 ttaattgcacttttccccctataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 9665876 - 9665828
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgcattttgcaccc 385  Q
    |||||| |||||| |||||||| |||||| |||||||||||||||||||    
T  9665876 ttaattccacttttccccctatcttttgctaattgtgcattttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 11350822 - 11350861
Alignment:
Q  347 tttcccccctatattttgccaattgtgcattttgcacccc 386  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  11350822 tttcacccctatcttttgccaattgtgcattttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 12498570 - 12498621
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  12498570 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 12498979 - 12498928
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  12498979 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 26571215 - 26571164
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  26571215 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 34576870 - 34576920
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||||||||| |||||| |||||||| ||||| ||||||    
T  34576870 ttaattgcactttcccccctatcttttgctaattgtgcgattttacacccc 34576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 37610205 - 37610255
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtg-cattttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  37610205 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 37780323 - 37780373
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtg-cattttgcacccc 386  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  37780323 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 43463759 - 43463809
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||| |||| |||||||||||||| ||||||||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 19514528 - 19514580
Alignment:
Q  337 ttaattgcactttcccccc--tatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  19514528 ttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||||||||| |||||||| ||||| ||||||||| ||||||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 37610668 - 37610620
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||| ||||||||||||||| ||||| |||||||| ||||||||||    
T  37610668 ttaattgtactttcccccctatagtttgctaattgtgcgattttgcacc 37610620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 43464242 - 43464194
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||    
T  43464242 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcaccc 385  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  6908534 ttaattgcactttcccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 27096050 - 27096087
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc 374  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27096050 ttaattgcactttcccccctatattttgctaattgtgc 27096087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 27182253 - 27182216
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc 374  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27182253 ttaattgcactttcccccctatattttgctaattgtgc 27182216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 10533028 - 10533088
Alignment:
Q  328 tttctaagattaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||| | ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  10533028 tttctaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 3687707 - 3687656
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  3687707 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 3687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 9035344 - 9035293
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  9035344 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 9412376 - 9412325
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  9412376 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 37888836 - 37888887
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  37888836 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 37889310 - 37889259
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  37889310 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 37972447 - 37972396
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  37972447 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 3204672 - 3204721
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  3204672 ttaattgcactttccccc-tatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 13744283 - 13744233
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  13744283 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 18864462 - 18864404
Alignment:
Q  327 ttttctaagattaattgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||||||||    
T  18864462 ttttctaggcttaattgtacttttccccctatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 42419079 - 42419037
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgcatttt 379  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttt 42419037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 48359323 - 48359373
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  48359323 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 765737 - 765788
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  765737 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 25438795 - 25438846
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  25438795 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 41662454 - 41662403
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  41662454 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 41662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 13936726 - 13936776
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| |||| |||||||||| ||||||||||||    
T  13936726 ttaattgcacttttccccctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 12281127 - 12281176
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  12281127 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 43162237 - 43162285
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  43162237 ttaattgcacttttccccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 813 - 763
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    |||||||||||||  |||||||| |||||||||||||| ||||||||||||    
T  813 ttaattgcactttttcccctatagtttgccaattgtgcgattttgcacccc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 6747 - 6697
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  6747 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 6697  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 411926 - 411976
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacccc 386  Q
    ||||||||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  411926 ttaattgcactttaccccctatcttttgtcaattgtgcgattttgcacccc 411976  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 183713 - 183663
Alignment:
Q  337 ttaattgcacttt-cccccctatattttgccaattgtgcattttgcacccc 386  Q
    ||||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  183713 ttaattgcacttttcccccctatattttgctaattgtgcgatttgcacccc 183663  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 17206 - 17158
Alignment:
Q  337 ttaattgcactttcccccctatattttgccaattgtgc-attttgcacc 384  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||||    
T  17206 ttaattgcacttttccccctatcttttgctaattgtgcaattttgcacc 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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