View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12598_high_84 (Length: 241)
Name: NF12598_high_84
Description: NF12598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12598_high_84 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 11059861 - 11059652
Alignment:
| Q |
18 |
cactaggcagtataaaataacaaccataaattggatcataagcactatgttattttgaaactgattctactatgcataccacgatttgcagtagcctgtg |
117 |
Q |
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| T |
11059861 |
cactaggcagtataaaataacaaccataaattggatcataagcactatgttattttgaaattgattctactatgcataccacgatttgcagtagcctgtg |
11059762 |
T |
|
| Q |
118 |
cctcagccataaactcttcataagaagcctgaaaaaacaaccatatatattagtctcttaaatcttaatcaagttttttgaatgataatgaaggattaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11059761 |
cctcagccataaactcttcataagaagcctgaaaaaacaaccatatatattagtctcttaaatcttaatcaagttttttgaatgataatgaaggattaat |
11059662 |
T |
|
| Q |
218 |
aaccttcatc |
227 |
Q |
| |
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|||||||||| |
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| T |
11059661 |
aaccttcatc |
11059652 |
T |
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