View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12598_low_109 (Length: 214)
Name: NF12598_low_109
Description: NF12598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12598_low_109 |
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Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 6289799 - 6289635
Alignment:
| Q |
36 |
atgcatatcaaatttcatacgtaccttgagttcgtagcgcctattaaagaaaaggcagatcccaaagtgtttgaagagcatatccttatcatcatagggc |
135 |
Q |
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| T |
6289799 |
atgcacatcaaatttcatacgtaccttgagttcgtagcgcctattaaagaaaaggcagatcccaaagtgtttgaagagcatatccttatcatcatagggc |
6289700 |
T |
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| Q |
136 |
aaccttggaacaatgtcattgcaataaacaaacctacaataggttatacgattttccttcatttt |
200 |
Q |
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| T |
6289699 |
aaccttggaacaatgtcattgcaataaacaaacctgcaataggttatacgattttccttcatttt |
6289635 |
T |
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