View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12598_low_16 (Length: 525)

Name: NF12598_low_16
Description: NF12598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12598_low_16
NF12598_low_16
[»] chr7 (69 HSPs)
chr7 (219-478)||(5752096-5752355)
chr7 (1-173)||(13099317-13099490)
chr7 (4-173)||(27306076-27306243)
chr7 (1-149)||(21990423-21990571)
chr7 (5-164)||(9679336-9679495)
chr7 (2-173)||(26804784-26804955)
chr7 (1-173)||(11355531-11355705)
chr7 (1-173)||(20626311-20626481)
chr7 (1-173)||(20630202-20630372)
chr7 (1-173)||(20642621-20642791)
chr7 (1-173)||(21678339-21678506)
chr7 (1-173)||(31434892-31435062)
chr7 (1-174)||(42330845-42331013)
chr7 (1-176)||(21591986-21592159)
chr7 (1-173)||(44724852-44725022)
chr7 (1-173)||(443869-444044)
chr7 (43-173)||(11759449-11759575)
chr7 (2-173)||(42223432-42223600)
chr7 (1-173)||(4295781-4295950)
chr7 (22-165)||(9681116-9681257)
chr7 (43-173)||(20297684-20297810)
chr7 (1-149)||(39145855-39146002)
chr7 (1-148)||(22251455-22251601)
chr7 (43-173)||(20299782-20299908)
chr7 (43-173)||(38394308-38394434)
chr7 (6-174)||(21680308-21680473)
chr7 (3-173)||(27832488-27832651)
chr7 (50-173)||(7471821-7471940)
chr7 (43-173)||(1606701-1606827)
chr7 (50-172)||(28487882-28488000)
chr7 (43-173)||(48457975-48458100)
chr7 (1-173)||(40836583-40836759)
chr7 (43-174)||(44886-45013)
chr7 (50-173)||(9027034-9027153)
chr7 (43-167)||(3036046-3036166)
chr7 (1-158)||(37411982-37412141)
chr7 (43-174)||(43253357-43253484)
chr7 (54-173)||(22137411-22137527)
chr7 (50-173)||(25542857-25542976)
chr7 (50-173)||(28485894-28486013)
chr7 (54-173)||(40552438-40552554)
chr7 (43-173)||(7094301-7094427)
chr7 (1-173)||(24465810-24465975)
chr7 (48-173)||(1850308-1850429)
chr7 (50-173)||(7469864-7469982)
chr7 (54-173)||(40550161-40550277)
chr7 (43-176)||(2935590-2935719)
chr7 (51-162)||(35959-36066)
chr7 (54-173)||(3878911-3879027)
chr7 (51-173)||(7092054-7092172)
chr7 (1-173)||(24748868-24749035)
chr7 (54-171)||(38396972-38397084)
chr7 (3-161)||(26295723-26295873)
chr7 (43-173)||(7351491-7351618)
chr7 (43-138)||(18345863-18345955)
chr7 (1-173)||(24813348-24813513)
chr7 (4-173)||(22393999-22394161)
chr7 (99-173)||(1046757-1046831)
chr7 (99-173)||(1049129-1049203)
chr7 (54-138)||(22108401-22108483)
chr7 (43-173)||(7349117-7349243)
chr7 (54-173)||(40946663-40946777)
chr7 (52-173)||(7188861-7188979)
chr7 (99-173)||(20136991-20137066)
chr7 (1-176)||(25276403-25276569)
chr7 (123-173)||(31153691-31153740)
chr7 (104-173)||(1502816-1502883)
chr7 (1-67)||(20137061-20137125)
chr7 (120-148)||(25357324-25357352)
[»] chr1 (78 HSPs)
chr1 (1-173)||(39462782-39462956)
chr1 (1-173)||(28206912-28207086)
chr1 (1-158)||(27336799-27336958)
chr1 (1-173)||(50307389-50307564)
chr1 (1-158)||(27338990-27339149)
chr1 (1-173)||(14097815-14097987)
chr1 (1-173)||(47906533-47906704)
chr1 (1-173)||(2949079-2949250)
chr1 (1-173)||(6995540-6995718)
chr1 (1-174)||(12302348-12302523)
chr1 (1-173)||(23816149-23816323)
chr1 (1-167)||(25251127-25251292)
chr1 (1-157)||(15823809-15823968)
chr1 (1-173)||(41647183-41647355)
chr1 (1-168)||(11457327-11457493)
chr1 (22-173)||(50078635-50078787)
chr1 (1-174)||(50248416-50248588)
chr1 (10-173)||(4131221-4131384)
chr1 (1-173)||(18839851-18840022)
chr1 (1-173)||(28998094-28998271)
chr1 (1-173)||(29003810-29003987)
chr1 (52-173)||(3579431-3579550)
chr1 (1-173)||(13215349-13215518)
chr1 (1-173)||(18307372-18307543)
chr1 (52-173)||(31490226-31490345)
chr1 (43-173)||(10399669-10399797)
chr1 (29-173)||(47451922-47452065)
chr1 (1-173)||(31424862-31425033)
chr1 (43-173)||(46431548-46431674)
chr1 (1-173)||(16429221-16429387)
chr1 (1-173)||(38925328-38925499)
chr1 (39-173)||(2617825-2617955)
chr1 (1-173)||(13447117-13447291)
chr1 (1-167)||(9240940-9241103)
chr1 (43-173)||(16226480-16226607)
chr1 (1-173)||(17319150-17319321)
chr1 (43-173)||(20291768-20291894)
chr1 (43-173)||(47177674-47177801)
chr1 (43-175)||(15294676-15294803)
chr1 (43-175)||(16231875-16232004)
chr1 (54-174)||(39932398-39932515)
chr1 (43-173)||(20302753-20302879)
chr1 (43-173)||(47180025-47180152)
chr1 (43-173)||(51750351-51750476)
chr1 (1-173)||(25248398-25248569)
chr1 (43-175)||(9459275-9459403)
chr1 (43-175)||(9463102-9463230)
chr1 (43-173)||(13762148-13762275)
chr1 (43-173)||(23786151-23786278)
chr1 (39-148)||(25860278-25860382)
chr1 (43-173)||(31735365-31735490)
chr1 (22-174)||(40134231-40134379)
chr1 (1-148)||(17324327-17324483)
chr1 (43-173)||(13358885-13359011)
chr1 (52-173)||(31422706-31422827)
chr1 (1-174)||(15916655-15916822)
chr1 (53-174)||(30780361-30780483)
chr1 (1-167)||(17324484-17324654)
chr1 (58-173)||(51757862-51757973)
chr1 (43-173)||(28842806-28842931)
chr1 (1-173)||(17185979-17186145)
chr1 (1-130)||(50076563-50076690)
chr1 (1-167)||(25128136-25128301)
chr1 (50-173)||(24325982-24326101)
chr1 (1-132)||(16428917-16429043)
chr1 (54-165)||(16432705-16432813)
chr1 (43-156)||(2510202-2510311)
chr1 (1-173)||(8348905-8349068)
chr1 (1-167)||(6114959-6115120)
chr1 (50-173)||(14183455-14183573)
chr1 (43-138)||(28840991-28841083)
chr1 (50-167)||(18800429-18800542)
chr1 (1-173)||(13125310-13125474)
chr1 (1-89)||(6756791-6756877)
chr1 (58-173)||(51752696-51752805)
chr1 (16-173)||(30790250-30790402)
chr1 (4-79)||(26520061-26520134)
chr1 (1-156)||(16561732-16561878)
[»] chr6 (55 HSPs)
chr6 (1-173)||(9020224-9020398)
chr6 (3-173)||(3233567-3233739)
chr6 (1-173)||(11982872-11983045)
chr6 (1-173)||(3631784-3631955)
chr6 (1-166)||(15346645-15346806)
chr6 (1-173)||(15367330-15367498)
chr6 (1-173)||(3629711-3629881)
chr6 (50-173)||(24338295-24338417)
chr6 (4-169)||(30728673-30728837)
chr6 (11-173)||(15530003-15530167)
chr6 (1-173)||(26065279-26065457)
chr6 (1-173)||(26085248-26085426)
chr6 (43-176)||(33311472-33311601)
chr6 (52-173)||(3394716-3394837)
chr6 (43-173)||(2628727-2628853)
chr6 (43-173)||(12195354-12195481)
chr6 (43-173)||(33309203-33309329)
chr6 (50-173)||(14458607-14458727)
chr6 (43-175)||(29754547-29754676)
chr6 (43-173)||(26065961-26066088)
chr6 (43-173)||(26068235-26068362)
chr6 (45-173)||(28241163-28241286)
chr6 (1-174)||(1069562-1069734)
chr6 (43-173)||(5273055-5273183)
chr6 (43-173)||(14507018-14507143)
chr6 (43-173)||(1230090-1230216)
chr6 (1-173)||(13057493-13057659)
chr6 (54-174)||(19704402-19704521)
chr6 (1-167)||(14466622-14466785)
chr6 (1-173)||(32280295-32280463)
chr6 (9-167)||(22490921-22491073)
chr6 (43-173)||(30967548-30967673)
chr6 (54-174)||(4816070-4816186)
chr6 (3-173)||(15540990-15541154)
chr6 (54-173)||(26932403-26932518)
chr6 (99-173)||(8717195-8717268)
chr6 (99-173)||(18322493-18322566)
chr6 (51-174)||(22611023-22611139)
chr6 (52-173)||(25480227-25480346)
chr6 (1-173)||(25465444-25465606)
chr6 (120-173)||(13040179-13040232)
chr6 (51-173)||(30034447-30034562)
chr6 (54-173)||(17012387-17012502)
chr6 (1-163)||(26945444-26945600)
chr6 (1-90)||(12186000-12186087)
chr6 (53-173)||(16455280-16455394)
chr6 (1-157)||(28078063-28078210)
chr6 (1-173)||(3027703-3027867)
chr6 (54-157)||(20915213-20915312)
chr6 (119-173)||(10584358-10584413)
chr6 (1-66)||(13040053-13040117)
chr6 (1-156)||(19696740-19696887)
chr6 (2-87)||(12937126-12937208)
chr6 (120-173)||(28037576-28037630)
chr6 (50-156)||(6610378-6610478)
[»] chr5 (71 HSPs)
chr5 (2-173)||(36402170-36402343)
chr5 (1-165)||(2818186-2818351)
chr5 (1-175)||(39854746-39854923)
chr5 (1-173)||(6745331-6745507)
chr5 (1-173)||(6747567-6747743)
chr5 (1-173)||(18511056-18511228)
chr5 (50-173)||(41585580-41585702)
chr5 (1-173)||(2724156-2724328)
chr5 (1-167)||(17818340-17818508)
chr5 (1-173)||(24127119-24127291)
chr5 (1-173)||(31465833-31466005)
chr5 (1-159)||(16776420-16776580)
chr5 (1-173)||(20505687-20505859)
chr5 (1-173)||(26098129-26098304)
chr5 (1-174)||(658203-658372)
chr5 (52-173)||(34530559-34530679)
chr5 (43-173)||(3372977-3373104)
chr5 (1-172)||(6756755-6756926)
chr5 (43-173)||(18469321-18469448)
chr5 (1-173)||(36208839-36209007)
chr5 (1-166)||(40221786-40221956)
chr5 (1-173)||(18596909-18597079)
chr5 (1-167)||(21289024-21289187)
chr5 (1-173)||(37705626-37705796)
chr5 (1-173)||(1189454-1189623)
chr5 (1-167)||(2954679-2954843)
chr5 (3-169)||(21948291-21948464)
chr5 (43-173)||(34476894-34477020)
chr5 (43-176)||(38882400-38882528)
chr5 (1-173)||(696141-696310)
chr5 (43-173)||(10528937-10529065)
chr5 (1-134)||(18509201-18509334)
chr5 (1-148)||(17073147-17073296)
chr5 (1-146)||(20043253-20043397)
chr5 (43-173)||(25804336-25804463)
chr5 (1-165)||(10474176-10474339)
chr5 (43-173)||(10750011-10750137)
chr5 (43-173)||(10757487-10757613)
chr5 (43-173)||(18466996-18467123)
chr5 (43-173)||(34479259-34479385)
chr5 (1-135)||(26097994-26098127)
chr5 (50-174)||(38959971-38960091)
chr5 (43-173)||(39798342-39798468)
chr5 (50-148)||(20045298-20045395)
chr5 (50-172)||(12555757-12555880)
chr5 (43-167)||(27912848-27912969)
chr5 (54-177)||(23741693-23741813)
chr5 (43-173)||(10587127-10587252)
chr5 (1-173)||(25904366-25904536)
chr5 (43-173)||(27910745-27910872)
chr5 (3-173)||(16092045-16092213)
chr5 (50-174)||(21684293-21684412)
chr5 (1-173)||(31179213-31179387)
chr5 (50-173)||(4236947-4237065)
chr5 (54-173)||(15354414-15354530)
chr5 (54-173)||(15356690-15356806)
chr5 (54-173)||(23665368-23665484)
chr5 (54-173)||(23793103-23793219)
chr5 (43-154)||(25921333-25921440)
chr5 (43-173)||(2175213-2175341)
chr5 (52-173)||(4410343-4410458)
chr5 (44-154)||(31543047-31543153)
chr5 (1-173)||(15143731-15143896)
chr5 (50-172)||(6661038-6661155)
chr5 (52-173)||(39397857-39397970)
chr5 (101-173)||(31472458-31472531)
chr5 (43-154)||(31545395-31545502)
chr5 (1-174)||(20054100-20054267)
chr5 (54-173)||(15552569-15552685)
chr5 (23-85)||(2144504-2144561)
chr5 (55-138)||(23667644-23667725)
[»] chr3 (93 HSPs)
chr3 (1-173)||(18096740-18096914)
chr3 (1-173)||(32219328-32219503)
chr3 (2-174)||(24979952-24980127)
chr3 (1-173)||(18099010-18099184)
chr3 (1-173)||(36012070-36012243)
chr3 (3-175)||(53915336-53915508)
chr3 (1-173)||(53917506-53917678)
chr3 (1-173)||(43226328-43226495)
chr3 (2-167)||(18162907-18163074)
chr3 (1-173)||(3314928-3315100)
chr3 (1-174)||(25687997-25688174)
chr3 (1-173)||(43421260-43421429)
chr3 (1-173)||(43423308-43423477)
chr3 (1-173)||(4308122-4308295)
chr3 (1-173)||(1313652-1313822)
chr3 (1-167)||(27101028-27101195)
chr3 (1-164)||(43228534-43228696)
chr3 (1-173)||(27635497-27635672)
chr3 (22-177)||(32263877-32264029)
chr3 (1-174)||(12267818-12267989)
chr3 (1-173)||(42990547-42990717)
chr3 (1-173)||(45883183-45883357)
chr3 (1-174)||(9604446-9604621)
chr3 (43-173)||(1321771-1321897)
chr3 (1-174)||(15781122-15781294)
chr3 (1-173)||(6484603-6484773)
chr3 (1-173)||(41849302-41849470)
chr3 (43-173)||(11168393-11168519)
chr3 (1-173)||(28181247-28181417)
chr3 (1-173)||(1626525-1626697)
chr3 (43-173)||(747050-747177)
chr3 (1-167)||(5926615-5926778)
chr3 (43-173)||(6065633-6065760)
chr3 (43-173)||(25533717-25533842)
chr3 (43-173)||(50494291-50494417)
chr3 (43-173)||(51726847-51726972)
chr3 (1-144)||(51943613-51943758)
chr3 (43-155)||(38890332-38890441)
chr3 (2-171)||(47701522-47701684)
chr3 (3-173)||(54691417-54691586)
chr3 (1-173)||(53468295-53468467)
chr3 (1-166)||(880302-880465)
chr3 (43-173)||(6063283-6063410)
chr3 (1-175)||(47148743-47148909)
chr3 (4-173)||(28101848-28102013)
chr3 (1-173)||(51674608-51674780)
chr3 (1-174)||(3307003-3307177)
chr3 (1-173)||(5886441-5886618)
chr3 (1-173)||(5899914-5900091)
chr3 (1-173)||(6232043-6232208)
chr3 (43-173)||(7606443-7606570)
chr3 (43-173)||(10955867-10955992)
chr3 (43-173)||(10958163-10958288)
chr3 (51-171)||(5191951-5192066)
chr3 (1-174)||(10191151-10191324)
chr3 (43-174)||(10084228-10084354)
chr3 (43-173)||(456200-456325)
chr3 (43-173)||(458577-458702)
chr3 (43-173)||(38210663-38210789)
chr3 (1-167)||(4666757-4666922)
chr3 (43-173)||(25389198-25389326)
chr3 (4-170)||(880087-880251)
chr3 (43-173)||(10621366-10621494)
chr3 (54-173)||(22114143-22114258)
chr3 (50-173)||(28761287-28761406)
chr3 (2-146)||(48361538-48361684)
chr3 (43-173)||(5522466-5522592)
chr3 (51-173)||(11170670-11170788)
chr3 (3-173)||(31151590-31151754)
chr3 (4-173)||(39715711-39715883)
chr3 (1-173)||(23633696-23633862)
chr3 (20-174)||(17795523-17795670)
chr3 (20-174)||(19103963-19104110)
chr3 (52-173)||(53591477-53591597)
chr3 (54-166)||(53893900-53894009)
chr3 (43-173)||(28412870-28412995)
chr3 (1-66)||(30006084-30006151)
chr3 (43-173)||(3859802-3859930)
chr3 (1-173)||(42992629-42992799)
chr3 (54-135)||(26720850-26720928)
chr3 (43-173)||(4103736-4103861)
chr3 (1-80)||(42992513-42992594)
chr3 (52-156)||(561640-561739)
chr3 (54-123)||(35919018-35919085)
chr3 (1-117)||(8183035-8183148)
chr3 (103-167)||(36957651-36957713)
chr3 (23-173)||(53597504-53597644)
chr3 (49-173)||(25634177-25634294)
chr3 (1-87)||(1674208-1674292)
chr3 (1-34)||(10612761-10612794)
chr3 (50-173)||(25635672-25635788)
chr3 (121-173)||(29897527-29897580)
chr3 (112-176)||(35917873-35917937)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-173)||(80133-80305)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-173)||(79460-79631)
[»] chr2 (50 HSPs)
chr2 (1-173)||(43623423-43623596)
chr2 (1-173)||(21520534-21520709)
chr2 (1-167)||(6258668-6258833)
chr2 (5-174)||(17849360-17849529)
chr2 (1-178)||(42923346-42923525)
chr2 (1-174)||(19007879-19008052)
chr2 (1-173)||(3022411-3022582)
chr2 (1-173)||(6263993-6264164)
chr2 (22-173)||(7462789-7462940)
chr2 (1-173)||(28196874-28197045)
chr2 (1-174)||(14837507-14837680)
chr2 (1-173)||(22287181-22287352)
chr2 (2-174)||(22162868-22163037)
chr2 (43-170)||(27105085-27105209)
chr2 (1-148)||(15539400-15539545)
chr2 (43-171)||(45279844-45279968)
chr2 (3-173)||(22707595-22707765)
chr2 (52-174)||(28459037-28459157)
chr2 (43-167)||(23452084-23452204)
chr2 (1-126)||(22407346-22407470)
chr2 (22-178)||(45238837-45238990)
chr2 (1-145)||(5375218-5375362)
chr2 (3-138)||(17848681-17848814)
chr2 (54-173)||(19501843-19501958)
chr2 (43-173)||(36558721-36558848)
chr2 (43-173)||(36560981-36561108)
chr2 (52-167)||(38020370-38020484)
chr2 (1-90)||(40031979-40032069)
chr2 (52-167)||(34979440-34979554)
chr2 (43-157)||(35217826-35217936)
chr2 (56-173)||(19504178-19504291)
chr2 (43-174)||(24162062-24162190)
chr2 (43-173)||(45332020-45332147)
chr2 (43-157)||(13909902-13910012)
chr2 (50-173)||(38414028-38414149)
chr2 (61-173)||(11739421-11739532)
chr2 (78-173)||(42453798-42453890)
chr2 (84-173)||(22874431-22874519)
chr2 (43-157)||(35215449-35215559)
chr2 (1-97)||(44288987-44289083)
chr2 (1-173)||(11577957-11578123)
chr2 (1-173)||(20146459-20146623)
chr2 (4-174)||(23871058-23871230)
chr2 (50-138)||(42064793-42064878)
chr2 (54-173)||(20592368-20592484)
chr2 (112-173)||(37962791-37962852)
chr2 (1-146)||(17897125-17897261)
chr2 (1-135)||(31732666-31732792)
chr2 (1-86)||(40699615-40699697)
chr2 (119-173)||(42923293-42923347)
[»] chr4 (89 HSPs)
chr4 (1-174)||(22800704-22800878)
chr4 (1-173)||(22802577-22802750)
chr4 (1-173)||(14789273-14789444)
chr4 (1-170)||(36919432-36919600)
chr4 (1-173)||(52942329-52942504)
chr4 (1-173)||(36921338-36921509)
chr4 (4-173)||(14787274-14787442)
chr4 (1-173)||(2891609-2891780)
chr4 (1-173)||(38928024-38928193)
chr4 (1-174)||(40637391-40637567)
chr4 (1-173)||(33415334-33415504)
chr4 (1-173)||(24889113-24889286)
chr4 (1-173)||(40091259-40091431)
chr4 (1-174)||(17662091-17662261)
chr4 (1-176)||(24879307-24879474)
chr4 (50-173)||(49088922-49089044)
chr4 (1-173)||(24446502-24446670)
chr4 (1-173)||(47563078-47563248)
chr4 (52-173)||(16453676-16453796)
chr4 (4-167)||(27499362-27499530)
chr4 (43-174)||(37089211-37089339)
chr4 (50-173)||(47868774-47868894)
chr4 (3-167)||(48486638-48486803)
chr4 (1-174)||(3824446-3824626)
chr4 (1-176)||(24880769-24880938)
chr4 (1-173)||(11437679-11437855)
chr4 (22-165)||(13547494-13547635)
chr4 (1-164)||(11435271-11435438)
chr4 (52-174)||(16455594-16455715)
chr4 (1-171)||(12395692-12395861)
chr4 (1-171)||(12400654-12400823)
chr4 (2-172)||(6133155-6133326)
chr4 (52-173)||(37312924-37313044)
chr4 (43-173)||(22782577-22782704)
chr4 (52-173)||(53405508-53405626)
chr4 (52-173)||(5101284-5101404)
chr4 (43-174)||(6765210-6765336)
chr4 (54-174)||(31849439-31849554)
chr4 (43-174)||(2484714-2484840)
chr4 (43-174)||(5635317-5635443)
chr4 (50-173)||(9148608-9148727)
chr4 (43-174)||(14633684-14633811)
chr4 (43-173)||(16931631-16931757)
chr4 (43-173)||(22780212-22780339)
chr4 (43-173)||(44599680-44599805)
chr4 (1-173)||(4215623-4215792)
chr4 (1-173)||(3937126-3937290)
chr4 (43-173)||(24348567-24348692)
chr4 (43-173)||(26085818-26085944)
chr4 (51-173)||(47210637-47210755)
chr4 (1-173)||(36378610-36378777)
chr4 (50-173)||(22046526-22046646)
chr4 (54-173)||(8631260-8631374)
chr4 (43-158)||(51015611-51015722)
chr4 (1-174)||(22044230-22044407)
chr4 (52-173)||(56030828-56030945)
chr4 (54-173)||(9176315-9176429)
chr4 (1-146)||(47275042-47275185)
chr4 (54-173)||(18409192-18409309)
chr4 (54-173)||(5198781-5198895)
chr4 (51-174)||(7941697-7941815)
chr4 (54-173)||(9173987-9174101)
chr4 (54-173)||(11006094-11006209)
chr4 (54-173)||(11008408-11008523)
chr4 (59-154)||(22132248-22132340)
chr4 (43-173)||(38409570-38409696)
chr4 (2-166)||(36380668-36380827)
chr4 (43-173)||(16933988-16934111)
chr4 (43-157)||(18847518-18847628)
chr4 (23-173)||(5664576-5664722)
chr4 (1-157)||(38890090-38890240)
chr4 (43-173)||(18709003-18709130)
chr4 (59-154)||(22134476-22134567)
chr4 (52-166)||(41997858-41997968)
chr4 (1-167)||(18534689-18534847)
chr4 (101-173)||(19096298-19096370)
chr4 (72-173)||(38269995-38270091)
chr4 (1-173)||(619298-619464)
chr4 (52-173)||(19323061-19323177)
chr4 (2-173)||(8756103-8756265)
chr4 (114-173)||(18311215-18311275)
chr4 (3-173)||(22295485-22295646)
chr4 (52-173)||(12102450-12102566)
chr4 (4-87)||(25357963-25358042)
chr4 (1-33)||(16455559-16455591)
chr4 (1-137)||(18537360-18537489)
chr4 (22-80)||(30136890-30136945)
chr4 (50-166)||(31983390-31983501)
chr4 (19-135)||(47150783-47150889)
[»] chr8 (50 HSPs)
chr8 (1-173)||(15073030-15073202)
chr8 (1-173)||(41382981-41383154)
chr8 (1-173)||(28251410-28251583)
chr8 (1-173)||(41385063-41385233)
chr8 (3-173)||(15068302-15068472)
chr8 (1-173)||(14808080-14808252)
chr8 (1-173)||(14419035-14419206)
chr8 (43-173)||(18811075-18811202)
chr8 (1-173)||(37214109-37214280)
chr8 (1-173)||(35872301-35872469)
chr8 (22-175)||(33541253-33541403)
chr8 (43-175)||(18813249-18813378)
chr8 (1-173)||(25952840-25953010)
chr8 (43-173)||(22684491-22684620)
chr8 (3-166)||(13858341-13858498)
chr8 (62-173)||(14477630-14477740)
chr8 (1-168)||(30480352-30480519)
chr8 (51-173)||(43530491-43530609)
chr8 (1-146)||(36865856-36866002)
chr8 (43-173)||(3874361-3874487)
chr8 (43-173)||(3883436-3883562)
chr8 (43-173)||(27827353-27827479)
chr8 (43-173)||(28283062-28283188)
chr8 (43-174)||(27829664-27829791)
chr8 (43-173)||(4424386-4424512)
chr8 (43-173)||(32339677-32339803)
chr8 (43-176)||(15809586-15809714)
chr8 (1-173)||(21482630-21482798)
chr8 (43-174)||(24873038-24873167)
chr8 (50-173)||(27911447-27911567)
chr8 (50-173)||(27957866-27957986)
chr8 (51-157)||(5372042-5372148)
chr8 (1-107)||(181798-181901)
chr8 (4-173)||(27106747-27106910)
chr8 (1-173)||(15185564-15185730)
chr8 (50-173)||(609110-609230)
chr8 (50-178)||(43082348-43082472)
chr8 (3-173)||(15956279-15956443)
chr8 (3-173)||(2467979-2468143)
chr8 (43-154)||(44721211-44721318)
chr8 (16-173)||(21480838-21480990)
chr8 (1-156)||(31162532-31162683)
chr8 (43-157)||(43079970-43080080)
chr8 (1-85)||(1225486-1225568)
chr8 (114-173)||(183251-183310)
chr8 (1-157)||(31578148-31578292)
chr8 (84-173)||(3005486-3005572)
chr8 (120-166)||(2467887-2467932)
chr8 (1-157)||(31035440-31035587)
chr8 (99-147)||(1225571-1225619)
[»] scaffold0005 (3 HSPs)
scaffold0005 (4-173)||(50289-50457)
scaffold0005 (4-173)||(52288-52456)
scaffold0005 (43-174)||(183481-183608)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-173)||(14231-14398)
scaffold0131 (127-167)||(15393-15433)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-171)||(35866-36037)
[»] scaffold0045 (1 HSPs)
scaffold0045 (22-171)||(85526-85671)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-172)||(11315-11489)
[»] scaffold0472 (1 HSPs)
scaffold0472 (43-173)||(6520-6646)
[»] scaffold0267 (1 HSPs)
scaffold0267 (54-173)||(357-473)
[»] scaffold0025 (1 HSPs)
scaffold0025 (43-174)||(69132-69259)
[»] scaffold1674 (1 HSPs)
scaffold1674 (43-167)||(1298-1418)
[»] scaffold0038 (1 HSPs)
scaffold0038 (45-173)||(41325-41448)
[»] scaffold0068 (1 HSPs)
scaffold0068 (50-174)||(29498-29617)
[»] scaffold0140 (2 HSPs)
scaffold0140 (54-173)||(24723-24839)
scaffold0140 (54-173)||(22448-22564)
[»] scaffold0127 (1 HSPs)
scaffold0127 (43-173)||(12715-12841)
[»] scaffold0370 (1 HSPs)
scaffold0370 (54-157)||(1309-1408)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-146)||(4267-4410)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-173)||(1493-1657)
[»] scaffold0891 (1 HSPs)
scaffold0891 (51-156)||(4535-4636)
[»] scaffold0250 (1 HSPs)
scaffold0250 (43-167)||(3200-3319)
[»] scaffold1899 (1 HSPs)
scaffold1899 (111-164)||(1-53)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-173)||(16501-16665)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 478
Target Start/End: Original strand, 5752096 - 5752355
Alignment:
Q  219 aagcttcattggatgctaggttccttagtgggttgaaggttgaaagagttgaagctgcaatggtctttaaatcaggtggttttggcgatatctttaccga 318  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||| || ||    
T  5752096 aagcttcattggatgctaggttccttagtgggttgaaggatgaaagagttgaggctgcaaaggtctttaaatcaggtggctttggcgatatcttgactga 5752195  T
Q  319 ccaacaagttgacaagaagcagttgattgatgatgttaggaaggctctttacgcagccaagatctgtggttacgcataagggatgaatctgatcagtgca 418  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||| |||||    
T  5752196 ccaacaagtagacaagaagcagttgattgatgatgttaggaaggctctttatgcagccaagatttgtagttacgcacaagggatgaatctgatccgtgca 5752295  T
Q  419 aagagcactgaaaagggatgggatttggcattgggtgaacttgcccgtatttggaaagga 478  Q
    |||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  5752296 aagagtgctgaaaagggttgggatttggaattgggtgaacttgcccgtatttggaaagga 5752355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13099490 - 13099317
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  13099490 ccgaactgggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg- 13099392  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  13099391 ttttggttgtttgacgatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 27306243 - 27306076
Alignment:
Q  4 aactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttg 103  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||    
T  27306243 aactgggtcaacaaattcttgtgttctctcttct-tttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttg-ttttg 27306146  T
Q  104 gttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| ||| |||| |||| ||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  27306145 gttgcttgactatcccttgttccacacatcaagtttgttattggtgtgatctctcatcgaattcgcaaca 27306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 21990423 - 21990571
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  21990423 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgtttgctacttttggcttgtgtttataattgttccatacactttga 21990520  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21990521 ttttggttgcctgattatcccttgctccacacatcaagtttattattggta 21990571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 9679336 - 9679495
Alignment:
Q  5 actgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    |||||||||||||||||||  ||||| |||||||| |||||||| | | ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  9679336 actgggtcaacaaattcttttgtgttatctcttcc-tttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacactttgatttt 9679433  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||    
T  9679434 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaa 9679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 26804784 - 26804955
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||  |||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |    
T  26804784 cgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacactttg-t 26804881  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||| ||||  |||||||||||||||| |||||||||||| |||||| ||||| |||||||||||    
T  26804882 tttggttgcttgactatcctttgctccacacatcaaatttgttattggtgtgatttctcatcaaattcgcaaca 26804955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11355531 - 11355705
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||| |  |||||||||| | | ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||     
T  11355531 ccgaactgggtcaacaaattcttttatgttctctcttacttctctctct-tgttgttttctacttttggcttgtgtttataattgttccatacactttgt 11355629  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||  ||||||||||||||||| ||| |||||||| ||| ||||||||||||||| |||||    
T  11355630 ttttggttgcctgattattccttgctccacacatcaaatttattattggtgtgattttttcatcgaattcccaaca 11355705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20626311 - 20626481
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||   |||||||| |||| |    
T  20626311 ccgaactgggtcaacaaattcttttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacacttt-a 20626407  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  20626408 ttttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20630202 - 20630372
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||   |||||||| |||| |    
T  20630202 ccgaactgggtcaacaaattcttttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacacttt-a 20630298  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  20630299 ttttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20642621 - 20642791
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||   |||||||| |||| |    
T  20642621 ccgaactgggtcaacaaattcttttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacacttt-a 20642717  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  20642718 ttttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21678339 - 21678506
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||| |||||||||||||||||||||||||  |||||| |||||||   |||||||||||||||||||||||||||||||| ||| ||||| ||    
T  21678339 ccgaactgggacaacaaattcttgtgttctctcttct-tttctcccgctgtt---ttctacttttggcttgtgtttataattgttccttacactttg-tt 21678433  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||  ||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  21678434 ttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgatttttcatcgaattcacaaca 21678506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31435062 - 31434892
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  31435062 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgtttataattgttccttacacttt-a 31434968  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    ||||| |||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  31434967 ttttgattgcttgattattccttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 42331013 - 42330845
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||| |   ||||||||||||   |||||||||||||||||||||||||||||||||||| |||||     
T  42331013 ccgaactgggtcaacaaattcttttgtgttctctctttc---tctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg- 42330921  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| ||||||||  |||||||||||||||||||| |||||||  |||||| ||||||||||||||||||    
T  42330920 ttttggttgcttgattatccattgctccacacatcaagtttattattggcgtgatttctcatcgaattcgcaacag 42330845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 21592159 - 21591986
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||      
T  21592159 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt-- 21592064  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaa 176  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| |   || ||| ||||||||||||||||||||    
T  21592063 ttttggttgtctgattatcacttgctccacacatcaagtttgttatagccgtgttttctcatcgaattcgcaacagaa 21591986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 44724852 - 44725022
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataat-tgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  44724852 ccgaactgggtcaacaaattcttttgtgttctctcttca-tttctctcg---ttgttttctacttttggcttgtgtttataatatgttccatacactttg 44724947  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| ||| |||| |||||||||||||||||||||||||||||| || |||  ||||||||||||||||    
T  44724948 -ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttcccatcgaattcgcaaca 44725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 443869 - 444044
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| || | |||||||||||||||||||||| |||||||||||| |||| |||||    
T  443869 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacactttg 443967  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaaca 173  Q
     |||||||||| ||| |||  |||||||||||||||||||||||||||||| |||  ||| ||||||||||| |||||    
T  443968 -ttttggttgcttgactattccttgctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 11759449 - 11759575
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  11759449 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 11759544  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  11759545 attggtgtgatttttcatcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 42223432 - 42223600
Alignment:
Q  2 cgaactgggtcaacaaattcttgtgttctctct-tccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||| |||| ||||| | | ||||||||    |||||||||||||||| ||||||||||||||||||  |||| |||| |||    
T  42223432 cgaactgggtcaacaaattcttttgttttctctcttcttttctctca---ttgttttctacttttgccttgtgtttataattgttttatacacttt-att 42223527  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||||| || ||||| |||||||||||||||    
T  42223528 ttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttttatcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 4295950 - 4295781
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||||  |||||||||||||| | ||||||||||     ||||||||||||||||||||||||| ||||||| |||| |||||     
T  4295950 ccgaactgggtgaacaaattcttttgtgttctctctt-cttttctctcgc---cattttctacttttggcttgtgtttattattgttctatacactttg- 4295856  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||| ||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4295855 ttttggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgatttttcatcgaatttgcaaca 4295781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 9681116 - 9681257
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||    
T  9681116 ttgtgttctctcttcc-tttctctctc-gatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcactt 9681213  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    | ||||||||||||||||||||||||| || ||| |||| ||||    
T  9681214 gttccacacatcaagtttgttattggtgtgttttctcattgaat 9681257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20297684 - 20297810
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20297684 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 20297779  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  20297780 attggtgtgatttttcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39146002 - 39145855
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||| |||||||||||||||||  ||||  ||||     
T  39146002 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttggtttgtgtttataattgtttaatacaatttg- 39145906  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  39145905 ttttggttgcttgattatcacttactccacacatcaagtttgttattggta 39145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22251601 - 22251455
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||||||  || |||||||||||||||||||||||||||||||||| ||||| |||||     
T  22251601 ccgaactgggtcaacaaattcttttgtgttctatcttcc-tttctctct-tgctgttttctacttttggcttgtgtttataattgtttcatacactttg- 22251505  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||||||||    
T  22251504 ttttggttgtttgattatcccttgctcaacacatcaagtttgttattggt 22251455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20299782 - 20299908
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20299782 tctcgcagttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 20299877  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||| ||||| |||||    
T  20299878 attggtgtgatttttcatcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 38394308 - 38394434
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  38394308 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 38394403  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  38394404 attggtgtgatttttcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 6 - 174
Target Start/End: Original strand, 21680308 - 21680473
Alignment:
Q  6 ctgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttg 103  Q
    |||||||||||||| ||| |  |||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  21680308 ctgggtcaacaaatacttttttgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttt 21680402  T
Q  104 gttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||| |||||||  |||||| ||||||||||| ||||||||||| ||  |||||||||||||| ||||||    
T  21680403 gttgcatgattattccttgcttcacacatcaagcttgttattggtgtgggttttcatcgaattcacaacag 21680473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 27832651 - 27832488
Alignment:
Q  3 gaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||| |||||||||||||||| |||||| | |||||||| |||||   |||||||||||| ||||| |||||| |  ||||||| ||||| ||||    
T  27832651 gaactgggtaaacaaattcttgtgttatctctttc-tttctctcactgtt---ttctacttttggtttgtgattataact--tccatacactttg-tttt 27832559  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| | ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27832558 ggttacttgattatttcctgctccacacattaagtttgttattggtatgatttttcatcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 7471940 - 7471821
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||     
T  7471940 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 7471845  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||| ||||||||||||    
T  7471844 tgatttttcattgaattcgcaaca 7471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 1606701 - 1606827
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  1606701 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgtt 1606796  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  1606797 attggtgtgatttttcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 28487882 - 28488000
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||     
T  28487882 gttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 28487977  T
Q  150 tgatttttcatcgaattcgcaac 172  Q
    |||||||||||||||||||||||    
T  28487978 tgatttttcatcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 48457975 - 48458100
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  48457975 tctcgccgttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 48458070  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  48458071 attggtgtga-ttttcatcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 40836759 - 40836583
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttct----ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||  ||| |    ||||| ||||||||||||||||||||||| ||||  |||||||||||| |    
T  40836759 ccgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgccgttgttttctacttttggcttgtattta--attgttccatacac 40836662  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc-atcgaattcgcaaca 173  Q
    |||| |||||||||  |||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  40836661 tttg-ttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgatcgaattcgcaaca 40836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 44886 - 45013
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  ||||||||||||||||||| |||    
T  44886 tctcgccgttgttttctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtt-gtt 44981  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||| ||||||||||||||||||    
T  44982 attggtgtgatttctcatcgaattcgcaacag 45013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 9027153 - 9027034
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||||     
T  9027153 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtg 9027058  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  9027057 tgatttttcatcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 3036046 - 3036166
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||  |||||    
T  3036046 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccaaacatcaa-attgtt 3036141  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    |||||| |||||| |||||||||||    
T  3036142 attggtgtgatttctcatcgaattc 3036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 37412141 - 37411982
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||| |||| ||||||||  |||||||| |||| |||  | || || ||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  37412141 ccgaactggatcaataaattcttttgtgttctcccttctcttcttttctctcgttgttttctagttttggcttgtgattataattgttccatacactttg 37412042  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc 158  Q
     |||||||||| |||||||  |||| ||||||||||||||||||||||||| ||| |||||    
T  37412041 -ttttggttgcttgattattccttgttccacacatcaagtttgttattggtgtgagttttc 37411982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 43253484 - 43253357
Alignment:
Q  43 tctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    ||||||||||||||| ||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||  ||||    
T  43253484 tctcgctgttgtttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaa-attgt 43253389  T
Q  142 tattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||| ||| |||||||||||||||||||||    
T  43253388 tattggtgtga-ttttcatcgaattcgcaacag 43253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 22137411 - 22137527
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||    
T  22137411 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgat 22137507  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  22137508 ttttcgtcgaattcacaaca 22137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 25542857 - 25542976
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  ||||||||||||  |||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||     
T  25542857 gttgttttctacttttggcttgtattta--attgttccatacattttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtg 25542952  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  25542953 tgatttttcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 28485894 - 28486013
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  ||||||||||||  |||| |||||||||| |||||||| ||||||||||| |||||| |||||||||||     
T  28485894 gttgttttctacttttggcttgtattta--attgttccatacattttg-ttttggttgcttgattatcccttgctccacatatcaag-ttgttattggtg 28485989  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  28485990 tgatttttcatcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 40552438 - 40552554
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||    
T  40552438 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgat 40552534  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  40552535 ttttcgtcgaattcacaaca 40552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7094427 - 7094301
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||||||||| || |||| ||||||||||| ||| |||  ||||||||||||||||||||||||    
T  7094427 tctcgccgttgttttctacttttgacttgtattta--attgttccacacacttt-attttggttgcttgactatgccttgctccacacatcaagtttgtt 7094331  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  7094330 attggtgtga-ttttcatcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24465810 - 24465975
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||| || |||||||| | |||||||||||| | ||||||||||||||   |||||||||||| ||||| |||||| |  ||||||| ||||| ||    
T  24465810 ccgaactgagtaaacaaatt-tcgtgttctctctttcttttctctcgctgtt---ttctacttttggtttgtgattataact--tccatacactttg-tt 24465902  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||| |||| |||||||||||| ||| |||||||| |||||||||||||||||| |||||    
T  24465903 ttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgatttttcatcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 1850308 - 1850429
Alignment:
Q  48 ctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattgg 147  Q
    ||||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  1850308 ctgttgttttctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 1850403  T
Q  148 tatgatttttcatcgaattcgcaaca 173  Q
    | ||||||   |||||||||||||||    
T  1850404 tgtgatttcaaatcgaattcgcaaca 1850429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 7469982 - 7469864
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||| ||||| |||||||| || |||||||||||||| || |||||||||     
T  7469982 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttagttgcttgattatccct-gctccacacatcaaatt-gttattggtg 7469888  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  7469887 tgatttttcatcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 40550161 - 40550277
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  40550161 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 40550257  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  40550258 ttttcgtcgaattcacaaca 40550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 2935590 - 2935719
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||| ||||||||||| ||||    
T  2935590 tctcgccgttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgcttcacacatcaag-ttgt 2935685  T
Q  142 tattggtatgatttttcatcgaattcgcaacagaa 176  Q
    ||||||| ||| |||||||||||||| ||||||||    
T  2935686 tattggtgtga-ttttcatcgaattcacaacagaa 2935719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 35959 - 36066
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||||| |||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |    
T  35959 ttgttttctacttttggtttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 36054  T
Q  151 gatttttcatcg 162  Q
    ||||| ||||||    
T  36055 gatttctcatcg 36066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 3878911 - 3879027
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||| |||| ||||  ||||||||||||  |||  |||||||||| ||||||||||||||||||||||||||| || |||||| | ||||    
T  3878911 ttttctacttttggtttgtattta--attgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaag-ttattattgatgtgat 3879007  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    || |||||||||||||||||    
T  3879008 ttctcatcgaattcgcaaca 3879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 7092172 - 7092054
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||| ||| | ||||  ||||||||| || |||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||| |    
T  7092172 ttgttttctacttttgacttatattta--attgttccacacacttt-attttggttgcttgactatcccttgctccacacatcaagtttgttattggtgt 7092076  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    || ||||||||||||| ||||||    
T  7092075 ga-ttttcatcgaatttgcaaca 7092054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24748868 - 24749035
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||  ||||||||||||||   ||||||||   |||||||||||||||| | ||||| ||||||   |||||||| |||||     
T  24748868 ccgaactgagtcaacaaattcttttgtgttctctctt-tatttctctc---gttgttttctactttt-gtttgtgattataa--cttccatacactttg- 24748959  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  24748960 ttttggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 38396972 - 38397084
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||||||| |||| ||||| |||||||||| | |||||| |||||||||||||||||| ||||||||||| |||     
T  38396972 ttttctacttttggcttgtattta--attgttctatacactttg-ttttggttgctttattatcccttgctccacacatcaag-ttgttattggtgtga- 38397066  T
Q  154 ttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||    
T  38397067 ttttcatcgaattcgcaa 38397084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 26295723 - 26295873
Alignment:
Q  3 gaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||| | |||||||||||||||| ||||||  |||||| ||   ||||||||||||||||||||||||||||||||  || ||||| ||||| ||||    
T  26295723 gaactggataaacaaattcttgtgttatctctt-tctttctttc---gttgttttctacttttggcttgtgtttataat--tttcatacactttg-tttt 26295815  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatc 161  Q
    | |||| |||||||| | ||||||| ||||||||| | |||||||| ||||||||||||    
T  26295816 gattgcttgattatcacgtgctccatacatcaagtat-ttattggtgtgatttttcatc 26295873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7351618 - 7351491
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| ||||| |||||||||| | |||||| ||| |||||||||||||| |||||    
T  7351618 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttaattatcccttactccacacatcaag-ttgtt 7351523  T
Q  143 attggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||| |||||    
T  7351522 attggtgtgattttttcatcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 18345863 - 18345955
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  18345863 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtt 18345955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24813513 - 24813348
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||   |||||||||||||||| | || |||||||||||||| |   | | |||||    
T  24813513 ccgaactgggtaaacaaattttgtgtgttctctcttccttttctctc---gttgttttctactttt-gtttatgtttataattgttac---cacgttgat 24813421  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| |||||||  ||||||||||||||||||| | |||||| | ||| ||||||||||| || |||||    
T  24813420 attggttgcttgattattacttgctccacacatcaagtattttattgatgtga-ttttcatcgaactcacaaca 24813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 22393999 - 22394161
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||||||| |||||||||||  |||||||||||| | |||||||||   ||||||||||||||||| ||||| |||||| |  ||||||| ||||| |||    
T  22393999 aactgggtaaacaaattcttttgtgttctctctttc-tttctctcg---ttgttttctacttttggtttgtgattataact--tccatacactttg-ttt 22394091  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||  ||| |||| |||||||||||  |||||||| ||||||||   |||||||||||||||| |||||    
T  22394092 tggttgtttgactatcacttgctccaca--tcaagtttattattggtggaatttttcatcgaattcacaaca 22394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 1046831 - 1046757
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  1046831 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttttcttcgaattcgcaaca 1046757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 1049203 - 1049129
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg-atttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||    
T  1049203 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgaatttttcttcgaattcgcaaca 1049129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 22108401 - 22108483
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  22108401 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 22108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7349243 - 7349117
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| |||||||||||||| ||||||| | |  ||||| |||| ||||||||||| | |||||| ||| |||||||||||||| |||||    
T  7349243 tctcgccgttgtttt-tacttttggcttgtatttataacttt--catacacttt-attttggttgcttaattatcccttactccacacatcaag-ttgtt 7349149  T
Q  143 attggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||| |||||    
T  7349148 attggtgtgattttttcatcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 40946663 - 40946777
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||| ||||||||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||| | |||     
T  40946663 ttttctatttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattgatgtga- 40946757  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    || ||||||||||| |||||    
T  40946758 ttctcatcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 7188861 - 7188979
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| ||||||||||||| |  ||||||| ||||| |||||||||| |||||||  ||||||||||||||||||| | |||||| | ||    
T  7188861 tgttttctacttttg-cttgtgtttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttattgatgtg 7188956  T
Q  152 a-tttttcatcgaattcgcaaca 173  Q
    | ||||| ||||||||| |||||    
T  7188957 attttttgatcgaattcacaaca 7188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 20137066 - 20136991
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||| ||| ||||| ||||||| |||||||||||||| |||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattttttcatcgaattcacaaca 20136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25276403 - 25276569
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| | |||||||||||  ||||||||||||   |||||||||   |||||||||||||||  ||||||||||  ||||||  || | ||||||    
T  25276403 ccgaactggttaaacaaattcttttgtgttctctctttt-tttctctcg---ttgttttctactttttacttgtgttta--attgtt--atccactttga 25276494  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaa 176  Q
    | |||||||| |||||| ||  || ||||||||||||||| ||||||||| |||||||| | ||||||| ||||||||    
T  25276495 tattggttgcttgattaact--tgatccacacatcaagtt-gttattggtgtgattttttagcgaattcacaacagaa 25276569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 31153740 - 31153691
Alignment:
Q  123 ctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31153740 ctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 31153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 1502883 - 1502816
Alignment:
Q  104 gttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||    
T  1502883 gttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20137125 - 20137061
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttgg 67  Q
    |||||||||||||||||||||  |||||||||||||| | ||||||||||   ||||||||||||||||    
T  20137125 ccgaactgggtcaacaaattcttttgtgttctctctt-cttttctctcgc---tgttttctacttttgg 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 25357324 - 25357352
Alignment:
Q  120 ttgctccacacatcaagtttgttattggt 148  Q
    |||||||||||||||||||||||||||||    
T  25357324 ttgctccacacatcaagtttgttattggt 25357352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 39462782 - 39462956
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  39462782 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttga 39462881  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39462882 ttttgattgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28207086 - 28206912
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28207086 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 28206987  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  28206986 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 27336958 - 27336799
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27336958 ccgaactgggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 27336859  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc 158  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  27336858 ttttggttgcctgattatcccttgctccacacatcaagtttgttattgatgtgatttttc 27336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 50307564 - 50307389
Alignment:
Q  1 ccgaactgggtcaacaaattctt---gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||   ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50307564 ccgaactgggtcaacaaattctttttgtgttctctcttatttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg 50307465  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  50307464 attttggttgcctgattatcccttgctccagacatcaagtttattattggtgtgatttttcatcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 27339149 - 27338990
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27339149 ccgaactaggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 27339050  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc 158  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  27339049 ttttggttgcctgattatcccttgttccacacatcaagtttgttattgatgtgatttttc 27338990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14097987 - 14097815
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  14097987 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacactttga 14097890  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||    
T  14097889 ttttggttgcttgattatctcttgcttcacacatcaagtttgttattggtgtgttttttcttcgaattcgcaaca 14097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47906533 - 47906704
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  47906533 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg- 47906630  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  47906631 gtttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2949250 - 2949079
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||| |    
T  2949250 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt-a 2949154  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2949153 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 6995718 - 6995540
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccc-----tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    ||||||| |||||||||||||  ||||||||||||||| |     ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  6995718 ccgaactaggtcaacaaattcttttgtgttctctcttctcttctttttctctcgctgttgttttctacttttggcttgtgtttatagttgttccatacac 6995619  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||||| |||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6995618 tttg-ttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12302523 - 12302348
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  12302523 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacactttga 12302426  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg--atttttcatcgaattcgcaacag 174  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| ||   ||||| ||||||||||||||||    
T  12302425 ttttggtttcctgattatcacttgctccacacatcaagtttgttattggtgtgtttttttttatcgaattcgcaacag 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23816149 - 23816323
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttc--cctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||||  ||||||||||||   | |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  23816149 ccgaactgggtcaacaaattcttttgtgttctctctttttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacacttt 23816248  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    | |||||||||| |||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23816249 g-ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 25251292 - 25251127
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||| ||||| |||||     
T  25251292 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttggcttgtgattataattgtttcatacactttg- 25251196  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25251195 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 25251127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 15823809 - 15823968
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||| |||| | |||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  15823809 ccgaactgggtcaacaaattcttttgtgttctctcttcttttttctcttgttgttgttttctacttttgccttgtgattataattgttccatacactttg 15823908  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||    
T  15823909 attttggttgcctgattaccccttactccacacatcaagtttgttattggtgtgattttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41647183 - 41647355
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||  || ||||||||||||||| ||||||||||||||| || ||||| ||||||    
T  41647183 ccgaactgggtcaacaaattctcttgtgttctctcttcc-tttctctct-tgctgttttctacttttgacttgtgtttataattatttcatacactttga 41647280  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||| |||||    
T  41647281 ttttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11457493 - 11457327
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||| ||||||||||||  |||||     
T  11457493 ccgaacttggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttaaaattgttccatatactttg- 11457397  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcg 168  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11457396 ttttggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtgatttttcatcgaattcg 11457327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 50078787 - 50078635
Alignment:
Q  22 ttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctct 120  Q
    |||| ||||||||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||  ||    
T  50078787 ttgttttctctcttctttttctctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattcct 50078689  T
Q  121 tgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  50078688 tgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 50248588 - 50248416
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||||||  |||||||||||||| |||||||| | ||||||||| |||||||||||||| ||||||||||||||||| |||||     
T  50248588 ccgaattgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttcaacttttggcttgtggttataattgttccatacactttg- 50248492  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||| ||| ||||||||||||| |||||||||||| |||||| ||||||||||| ||||||    
T  50248491 ttttggttgcttgattatcccttactccacacatcaaatttgttattggtgtgatttatcatcgaattcacaacag 50248416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 4131384 - 4131221
Alignment:
Q  10 gtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttg 107  Q
    ||||||||||||||  ||||||||| |||  |||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||    
T  4131384 gtcaacaaattcttttgtgttctctgttct-tttctctctc-gttgttttctatttttggcttgtgtttataattgttccatacactttg-ttttggttg 4131288  T
Q  108 cctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    | ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  4131287 cttgattatctcttgctccgcacatcaagtttgttattggtgtgagtttttcatcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18839851 - 18840022
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||| |||||||||||||||||||||||||||||| |||||     
T  18839851 ccgaactgggtcaacaaattctttcgtgttctctcttct-tttctctctc-gctgttttctagttttggcttgtgtttataattgttccatacactttg- 18839947  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||| | || | |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18839948 tttcgattacttgattattccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 18840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28998271 - 28998094
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||||  |||  | || || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  28998271 ccgaactgggtcaacaaattcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg 28998172  T
Q  98 at--tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| || |||||||| |||||    
T  28998171 attctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgttttctcttcgaattcacaaca 28998094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 29003987 - 29003810
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||||  |||  | || || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  29003987 ccgaactgggtcaacaaattcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg 29003888  T
Q  98 at--tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| || |||||||| |||||    
T  29003887 attctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgttttctcttcgaattcacaaca 29003810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 3579550 - 3579431
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacacttt-attttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 3579452  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||||||||||||||| |||||    
T  3579451 -tttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13215349 - 13215518
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  13215349 ccgaactgcgtcaacaaattcttttgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg-tt 13215445  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||  ||| |||| ||||||||||||||||||||| |||||||| || ||| ||| ||||||| |||||    
T  13215446 ttggttgtttgactatcccttgctccacacatcaagtttattattggtgtgttttctcaacgaattcacaaca 13215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18307372 - 18307543
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||| | ||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||     
T  18307372 ccgaacggagtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg- 18307468  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||| | |  ||| |||||||||||||||||    
T  18307469 ttttggttgcctaattatcatttgctccacacatcaagtttgttattgatgtattttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 31490226 - 31490345
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||    
T  31490226 tgttttctacttttgacttgtgtttataattgtttcatacacttt-attttggttgcttgattatctcttgctccacacatcaagtttg-tattggtgtg 31490323  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||    
T  31490324 atttttcatcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10399797 - 10399669
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  10399797 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgtt 10399701  T
Q  143 attggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||| |||| ||||||||||||||||||||    
T  10399700 attggtgtgatattttcatcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 47451922 - 47452065
Alignment:
Q  29 ctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccac 128  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| ||||||| ||    
T  47451922 ctctcttccttttctctcgttgttgctttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctcgac 47452020  T
Q  129 acatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||| | ||||||||||| |||||| |||||    
T  47452021 acatcaaatttgttattgatgtgatttttcattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31425033 - 31424862
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||||||| ||||||||||||||||| ||||||  ||||     
T  31425033 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttgacttgtgtttataattgtcccatacattttg- 31424937  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    || ||||||| ||| |||  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  31424936 ttatggttgcttgagtattccttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaaca 31424862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 46431674 - 46431548
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| |||    
T  46431674 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttg-ttttggttgcttgattatctcttgctccaaacatcaagtt-gtt 46431579  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  46431578 attggtgtgatttttcatcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16429221 - 16429387
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||||||  |||||||||||||  ||||||||||||||   ||| |||||||| |||||||||||| |  ||||||| |||||     
T  16429221 ccgaattgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttc-acttttggtttgtgtttataact--tccatacactttg- 16429312  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  16429313 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 38925499 - 38925328
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||  ||||||||    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  38925499 ccgaactgagtcaacaaattcttttgtgttctctcttct-tttctctca---ttgttttctacttttggcttgtgtttataaatgttccatacactttga 38925404  T
Q  99 -ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||||||||||||| ||| ||||||||||||||||| |||||||| || ||| ||||| ||||| |||||    
T  38925403 tttttggttgcctgattatcacttactccacacatcaagtttattattggtgtgttttctcatcaaattcacaaca 38925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 2617825 - 2617955
Alignment:
Q  39 tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||| |    
T  2617825 tttctctcgctgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaag-t 2617921  T
Q  139 tgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||  ||||||||||||||||||||    
T  2617922 tgttattggtgtg-gttttcatcgaattcgcaaca 2617955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13447291 - 13447117
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccct----ttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||  |    || |||||| ||||||||||||||||||||||| ||||  |||||||||||| |    
T  13447291 ccgaactgggtcaacaaattcttttgtgttcttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtattta--attgttccatacac 13447194  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  13447193 tttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 9241103 - 9240940
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||  ||||||||||| |  |||||||||| | ||||||||||||||   |||||||||||| |||| |||||||||||| ||||| |||||     
T  9241103 ccgaactggggaaacaaattcttttttgttctctctttc-tttctctcgctgtt---ttctacttttggtttgtatttataattgtttcatacactttg- 9241009  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  9241008 ttttggttgcttgattatcacttgctccacacttcaagtttgttattggtgtgattttttatcgaattc 9240940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 16226480 - 16226607
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  16226480 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 16226576  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  16226577 attggtgtgatttttcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 17319150 - 17319321
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | | ||||||||||||||||||||||||||| | |||||||| |||||     
T  17319150 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctattttctacttttggcttgtgtttataactattccatacactttg- 17319246  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||||||  ||| ||||||||||||| ||||||||||||  ||||||||||||||||| |||||    
T  17319247 ttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgatttttcatcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20291768 - 20291894
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| | |||||||||||| | ||||||||||||||||||||||||||| |||||    
T  20291768 tctcgccgttgttttctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccacacatcaag-ttgtt 20291864  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  20291865 attggtgtga-ttttcatcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 47177674 - 47177801
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  47177674 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 47177770  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| ||||||||| |||||    
T  47177771 attggtgtgatttttgatcgaattcacaaca 47177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 15294803 - 15294676
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  15294803 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 15294708  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| ||| ||||||||||| ||||||||||    
T  15294707 attggtgtga-ttttcatcgaaatcgcaacaga 15294676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 16231875 - 16232004
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  16231875 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatccgttgctccacacatcaag-ttgtt 16231971  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| |||||||||||||||||| |||||||    
T  16231972 attggtgtgatttttcatcgaattcacaacaga 16232004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 39932398 - 39932515
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  39932398 ttttctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgat 39932494  T
Q  154 ttttcatcgaattcgcaacag 174  Q
    |||||||||||||| ||||||    
T  39932495 ttttcatcgaattcacaacag 39932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 20302753 - 20302879
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| | |||||||||||| | |||||||||||||||||| |||||||| |||||    
T  20302753 tctcgccgttgttttctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccagacatcaag-ttgtt 20302849  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  20302850 attggtgtga-ttttcatcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 47180025 - 47180152
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||||||||| |||| | |||||| |||||||||||||||||| |||||    
T  47180025 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttgattttgattgcttaattatcccttgctccacacatcaag-ttgtt 47180121  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| ||||||||| |||||    
T  47180122 attggtgtgatttttgatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 51750351 - 51750476
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  51750351 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 51750446  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||    
T  51750447 attggtgtgattttt-atcgaattcgcaaca 51750476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25248569 - 25248398
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttcc-ctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||  ||||||| | ||||||  | ||||||||   ||||||||||||||| ||| |||||||||||||| ||||| |||||    
T  25248569 ccgaactgggtcaacaaattcttttgtgttttatcttccggtgtctctcgc---tgttttctacttttgacttttgtttataattgtttcatacactttg 25248473  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| ||| |||  ||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  25248472 -ttttggttgcttgactattccttactccacacatcaagtttgttattgttgtgatttttcatcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 9459403 - 9459275
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  9459403 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 9459308  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| |||||||||||||||||| |||||||    
T  9459307 attggtgtgatttttcatcgaattcacaacaga 9459275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 9463230 - 9463102
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  9463230 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 9463135  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| |||||||||||||||||| |||||||    
T  9463134 attggtgtgatttttcatcgaattcacaacaga 9463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 13762148 - 13762275
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  13762148 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccctttctccacacatcaag-ttgtt 13762243  T
Q  143 attggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||| ||||||| |||||||||||||||||    
T  13762244 attggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 23786151 - 23786278
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||| ||||    
T  23786151 tctcgccgttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgt 23786246  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  23786247 tattggtgtgatttttcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 25860382 - 25860278
Alignment:
Q  39 tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    ||| |||| ||||||||||||||||||||    
T  25860382 tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggt----tgactatcccttgctccacacatcaagtt 25860288  T
Q  139 tgttattggt 148  Q
    || |||||||    
T  25860287 tgatattggt 25860278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 31735490 - 31735365
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  31735490 tctcgccgttgttttcta-ttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 31735396  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| | |||| |||||||||||||||||    
T  31735395 attggtgtaatttctcatcgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 40134231 - 40134379
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctc-- 119  Q
    ||||||||||| |||  |||||||||   ||||||||||||||||||||| | |||||| |  ||||||| ||||| |||||||||||||||||| ||      
T  40134231 ttgtgttctctattctttttctctcg---ttgttttctacttttggcttgagattataact--tccatacactttg-ttttggttgcctgattatatcac 40134324  T
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  40134325 ttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacag 40134379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17324327 - 17324483
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctt-------tctctcgctgt---tgttttctacttttggcttgtgtttataattgttccata 90  Q
    ||||||| ||||||||||||||||||||||||||||| ||       |||||| || |   ||||||||||||||||||||||||||||||| || ||||    
T  17324327 ccgaactaggtcaacaaattcttgtgttctctcttcctttctctctctctctctctctcactgttttctacttttggcttgtgtttataattttttcata 17324426  T
Q  91 cgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    | ||||| || ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  17324427 cactttg-ttatggttgcttgattattccttgctccacacatcaagtttgttattggt 17324483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 13358885 - 13359011
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| ||| |||| ||| |||||||||||||| |||||    
T  13358885 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgactatcccttactccacacatcaag-ttgtt 13358981  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  13358982 attggtgtga-ttttcatcgaattcgcaaca 13359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 31422827 - 31422706
Alignment:
Q  52 tgttttctacttttggcttgtgttt-ataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||| ||||||||| |||||| |||| ||| |||| ||||| ||||  |||||||  |||||||||||||||||||||||||||| | |    
T  31422827 tgttttctacttttgacttgtgttttataattattccgtacacttt-attttagttgattgattattccttgctccacacatcaagtttgttattgatgt 31422729  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||    
T  31422728 gatttttcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15916655 - 15916822
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | || |||||||||| | ||| ||||||||||  ||||||||||||||||||||||||||   |||||||| ||||| |    
T  15916655 ccgaactgggtaaacaaattttgtgcgttctctctttctttt-tctcgctgtt--tttctacttttggcttgtgtttataa--cttccatacactttg-t 15916748  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||| ||||| |  ||||||||||||||||||| | |||||||| ||| |||||||||||||| ||||||    
T  15916749 tttggttgcttgattgttacttgctccacacatcaagtat-ttattggtgtgacttttcatcgaattcacaacag 15916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 30780361 - 30780483
Alignment:
Q  53 gttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccaca--catcaagtttgttattggtat 150  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||||| |||||||||| |||||||  ||| |||||||  ||||||||||||||||||| |    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttg-ttttggttgcttgattattccttactccacacacatcaagtttgttattggtgt 30780459  T
Q  151 gatttttcatcgaattcgcaacag 174  Q
    || |||||||||||||| ||||||    
T  30780460 gagttttcatcgaattcacaacag 30780483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 17324654 - 17324484
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgct-gttgttttctacttt-tggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||  ||||||||||||||| |||  | || || | ||||||||||||| |||||| || |||||||||||| || | ||||    
T  17324654 ccgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctctcgctgttttctactttctggcttatgattataattgttctattcacttt 17324555  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattc 167  Q
    | || ||| ||| ||| |||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||    
T  17324554 g-ttatggctgcttgactatcccttactccacacatcaagtttgttattggtgtgagtttttcatcgaattc 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 51757862 - 51757973
Alignment:
Q  58 ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    ||||||||||||||| || |  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||||    
T  51757862 ctacttttggcttgtattca--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcattttt 51757957  T
Q  158 catcgaattcgcaaca 173  Q
    |||||||||| |||||    
T  51757958 catcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 28842806 - 28842931
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  28842806 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgtt 28842901  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    ||| || ||| ||||||||||||||||||||    
T  28842902 attagtgtga-ttttcatcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17186145 - 17185979
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| ||||| |||||||||||  |||||||||||| | ||||||||||||||   |||||||||||  ||||| |||||| |  ||||||| |||||     
T  17186145 ccgaattgggtaaacaaattcttttgtgttctctctttc-tttctctcgctgtt---ttctacttttgt-ttgtgattataact--tccatacactttg- 17186054  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||| |||||    
T  17186053 ttttggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatttttcatcaaattcacaaca 17185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 50076690 - 50076563
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   |||||||||||||||  |||||||||||||||||||||||| |||||     
T  50076690 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcg---ttgttttctacttttaacttgtgtttataattgttccatacactttg- 50076595  T
Q  99 ttttggttgcctgattatctcttgctccacac 130  Q
    |||| ||||| | |||||   |||||||||||    
T  50076594 ttttagttgctttattattcattgctccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 25128136 - 25128301
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcc---ctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||||||  ||||||||||||||   |||||||||||||||   ||||||||||   ||||| ||||||||| |  || | |||    
T  25128136 ccgaactgggtcaacaaattcttttgtgttctctcttcctttctttctctcgctgtt---ttctacttttat-ttgtgattataattgct--atccactt 25128229  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||||||||| |||||||  ||||||| ||||||||||||||||||||   ||| ||||||| ||||||    
T  25128230 tgattttggttgcttgattattccttgctctacacatcaagtttgttattgacgtgagttttcattgaattc 25128301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 24325982 - 24326101
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||| ||| |||| ||||| ||||  |||||||||||| |||| | ||||||||| |||||||| ||| |||||||||||||||| |||||||||     
T  24325982 gttgttttttacctttgacttgtattta--attgttccatacacttt-actttggttgcttgattatcccttactccacacatcaagtt-gttattggtg 24326077  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  24326078 tgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16428917 - 16429043
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||  ||||||||| ||||   |||||||||||| |||||||||||| |  || |||| |||||     
T  16428917 ccgaactgagtcaacaaattcttttgtgttctctcttct-tttctctcgatgtt---ttctacttttggtttgtgtttataact--tctatacactttg- 16429009  T
Q  99 ttttggttgcctgattatctcttgctccacacat 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  16429010 ttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 16432705 - 16432813
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||| || ||||||||| | |  ||||| || || ||||| ||||||||||||  ||||||||||||||||| |||||||||||| ||||    
T  16432705 ttttctacttttggtttatgtttataacttt--catacactgtg-ttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgat 16432801  T
Q  154 ttttcatcgaat 165  Q
    ||||||||||||    
T  16432802 ttttcatcgaat 16432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 2510311 - 2510202
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||| ||||| ||||  |||||||||||| ||||| |||| ||||| ||||||||||||||| |||| |||||| |||||    
T  2510311 tctcgccgttgttttctatttttgacttgttttta--attgttccatacactttg-ttttcgttgcttgattatctcttgcttcacatatcaag-ttgtt 2510216  T
Q  143 attggtatgatttt 156  Q
    |||||| |||||||    
T  2510215 attggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 8349068 - 8348905
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||     ||||||||||||||||  |||||||||||| |  ||||||| |||||      
T  8349068 ccgaactgggtaaacaaattttgtgtgttctctctttc-tttctctaa---ttgttttctacttttgt-ttgtgtttataact--tccatacactttg-- 8348978  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||  |||| ||||||| |||||||| |||||||| |||||||||||||||||| |||||    
T  8348977 tttggttgcttgattattacttgttccacacgtcaagttt-ttattggtgtgatttttcatcgaattcacaaca 8348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6115120 - 6114959
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||| ||  |||||||||||||  |||||||||   |||| ||||||||||| ||||| ||||||| |  |||||||  ||| |    
T  6115120 ccgaactgggtaaacaaattattttgtgttctctcttct-tttctctcg---ttgtcttctacttttgacttgtatttataact--tccatacatttt-a 6115028  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| |||||||| ||| ||||||||||||||| | |||  ||| ||||||||||| ||||||    
T  6115027 ttttggttgcttgattatcactttctccacacatcaagtatattaccggtgtgatttttcattgaattc 6114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 14183573 - 14183455
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||| |||||| ||||||||||||| |  ||||||| ||||| |||||||||| |||||||  |||||| |||||||||||| | ||||||||     
T  14183573 gttgttttcttcttttg-cttgtgtttataact--tccatacactttg-ttttggttgcttgattattacttgcttcacacatcaagtattttattggtg 14183478  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||||||||| |||||    
T  14183477 tgattttt-atcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 28840991 - 28841083
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| ||||| |||||||||| |||||||| |||||||||| |||||||||    
T  28840991 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccactcatcaagtt 28841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 18800542 - 18800429
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||||||||||   |||||||| ||||| ||||| |||| |||||||   |||||| ||||||||||| | || |||||     
T  18800542 gttgttttctacttttggcttgtgtttataa--cttccatacactttg-ttttgattgcttgattattatttgctctacacatcaagtattttgttggtg 18800446  T
Q  150 tgatttttcatcgaattc 167  Q
    ||| ||||||||||||||    
T  18800445 tga-ttttcatcgaattc 18800429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13125474 - 13125310
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||| ||| |||||||| | |||||||||||||  ||||||||||   |||||||||||||||| ||||||||||||| |||  |  ||   ||| |    
T  13125474 ccgaactaggtaaacaaatttcatgtgttctctcttttctttctctcg---ttgttttctacttttg-cttgtgtttataactgtcacccac---ttg-t 13125383  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||||||| | ||||||||||||||||||   |||||||| |||||||| | |||||||||||||    
T  13125382 tttggttgcttgattattt-ttgctccacacatcaagtaatttattggtgtgatttttgaacgaattcgcaaca 13125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6756791 - 6756877
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccat 89  Q
    ||||||||| ||||||||||||| |  |||||||||||  || |||||||||||   ||||||||||| ||||||||||||||||||||||    
T  6756791 ccgaactggatcaacaaattcttttctgttctctcttct-ttcctctcgctgtt---ttctacttttgacttgtgtttataattgttccat 6756877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 51752696 - 51752805
Alignment:
Q  58 ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    ||||||||||||||| || |  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||| ||| || |||||||| ||| ||||    
T  51752696 ctacttttggcttgtattca--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacat-aag-ttattattggtgtga-tttt 51752789  T
Q  158 catcgaattcgcaaca 173  Q
    |||||||||| |||||    
T  51752790 catcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 30790402 - 30790250
Alignment:
Q  16 aaattcttgtgttctctcttccctttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgatt 114  Q
    |||||| ||||| ||||||| | |||||||||||||  |||| ||| |||||  |||||||||||| |  ||||||| ||||| |||||||||| |||||    
T  30790402 aaattcgtgtgtgctctctttc-tttctctcgctgtctttttactatttttgt-ttgtgtttataact--tccatacactttg-ttttggttgcttgatt 30790308  T
Q  115 atctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||| ||||||||| || | |||||||| ||||||| |||||||||| |||||    
T  30790307 attacttgcttcacacatcaggtattttattggtgtgatttt-catcgaattcacaaca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 26520134 - 26520061
Alignment:
Q  4 aactgggtcaacaaat-tcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttata 79  Q
    |||||||| ||||||| || ||||||||||||| | ||||||||||||||   |||||||||| |||||||||||||    
T  26520134 aactgggtaaacaaatatcgtgtgttctctctttcttttctctcgctgtt---ttctacttttagcttgtgtttata 26520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16561732 - 16561878
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||||| || |||||||| | ||||||||||||| | |||||||||| |||   ||||||||||| |||||||||||||||||||    | | |||||    
T  16561732 ccgaactgtgtaaacaaatttcgtgtgttctctctttc-tttctctcgccgtt---ttctacttttg-cttgtgtttataattgttc---tcacgttgat 16561823  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt 156  Q
     |||||||| ||||||  | || ||||||||||||||| | |||||||| |||||||    
T  16561824 attggttgcttgatta--tttttctccacacatcaagtattttattggtgtgatttt 16561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 6e-69; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 9020224 - 9020398
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  9020224 ccgaactgggtcaacaaattcttttgtgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacactttg 9020323  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9020324 -ttttggttgtctgattatctcttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 3233739 - 3233567
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||    
T  3233739 gaactgggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgatt 3233640  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| | || ||| |||||||||||||||||    
T  3233639 ttggttgcctgattatcacttactccacacatcaaatttgttattgatgtgttttctcatcgaattcgcaaca 3233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11983045 - 11982872
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  11983045 ccgaactgggtcaacaaattcttttgtgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttg 11982946  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  11982945 -ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3631955 - 3631784
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||| |||||||| ||| |||| | | |||||||||||||||||||||||||||||||||||||||| |||||     
T  3631955 ccgaactgggtcaacaaattcttttgtgttatctcttcctttt-tctctc-gatgttttctacttttggcttgtgtttataattgttccatacactttg- 3631859  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  3631858 ttttggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtgttttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 15346645 - 15346806
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||   ||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  15346645 ccgaactgggtaaacaaatttcgtgtgttctctctttc-tttctct---tgttgttttctacttttggcttgtgtttataattgttccatatactttg-t 15346739  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  15346740 tttggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgatttttcatcgaatt 15346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15367330 - 15367498
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||||   |  |||||||||||||||||||||||||||||||||||||| ||||| |    
T  15367330 ccgaactgggtaaacaaattttgtgtgttctctctttc-tttctctcg---tatttttctacttttggcttgtgtttataattgttccatacactttg-t 15367424  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  15367425 tttggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3629881 - 3629711
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  3629881 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctactttttggcttgtgtttataattgttccatacactttg 3629786  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| ||||||||  ||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  3629785 -ttttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 24338417 - 24338295
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |     
T  24338417 gttgttttctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctccacacatcaagtttgttattgatg 24338319  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  24338318 tgatttttcatcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 30728837 - 30728673
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||| | | ||||||||||||||| ||||| |||||||||||||||||| ||||| |||    
T  30728837 aactgggtcaacaaattcttttgtgttatctcttcc-tttctctctc-gctgttttctacttttgacttgtatttataattgttccatacactttg-ttt 30728741  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgc 169  Q
    ||||||  ||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  30728740 tggttgtttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcaacgaattcgc 30728673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 15530167 - 15530003
Alignment:
Q  11 tcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcct 110  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||  |||||| ||| ||    
T  15530167 tcaataaattcttgtgttctctcttctttttctct-gctgttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtct 15530069  T
Q  111 gattatctcttgctccacacatcaagtttgttattggtatga---tttttcatcgaattcgcaaca 173  Q
    ||||||  ||| |||||||||||||||||||||||||| |||   ||| ||||||||||| |||||    
T  15530068 gattattccttactccacacatcaagtttgttattggtgtgagtttttctcatcgaattcacaaca 15530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26065279 - 26065457
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt--tct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||| ||  ||||||||| |||  ||  ||| || |||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  26065279 ccgaactgggtcaacaaattattttgtgttctctattcttttgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctt 26065378  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||||||||||| |||||||  ||||||||||| |||||    
T  26065379 tgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26085248 - 26085426
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt--tct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||| ||  ||||||||| |||  ||  ||| || |||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  26085248 ccgaactgggtcaacaaattattttgtgttctctattcttttgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctt 26085347  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||||||||||| |||||||  ||||||||||| |||||    
T  26085348 tgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 33311472 - 33311601
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  33311472 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 33311568  T
Q  143 attggtatgatttttcatcgaattcgcaacagaa 176  Q
    |||||| ||| |||||||||||||| ||||||||    
T  33311569 attggtgtga-ttttcatcgaattcacaacagaa 33311601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 3394716 - 3394837
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||  || |||||||||||||| || |||||||| ||    
T  3394716 tgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtg 3394815  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||| |||||||||||||||||    
T  3394816 ttttctcatcgaattcgcaaca 3394837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 2628853 - 2628727
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  2628853 tctcgccgttgttttctacttttggcttgtatttataact--tccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 2628757  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  2628756 attggtgtga-ttttcatcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 12195481 - 12195354
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  12195481 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 12195385  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  12195384 attggtgtgatttttcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 33309203 - 33309329
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  33309203 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 33309299  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  33309300 attggtgtga-ttttcatcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 14458727 - 14458607
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||  || ||||||||||||||  | ||||||||     
T  14458727 gttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatccattactccacacatcaag-ctattattggtg 14458631  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  14458630 tgatttttcatcgaattcgcaaca 14458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 29754676 - 29754547
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| |||| || ||||  |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||    
T  29754676 tctcgcagttgttttctactttttggctcgtattta--attgttccatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgt 29754581  T
Q  142 tattggtatgatttttcatcgaattcgcaacaga 175  Q
    ||||||| |||||||||||||||||| |||||||    
T  29754580 tattggtgtgatttttcatcgaattcacaacaga 29754547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 26066088 - 26065961
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||    
T  26066088 tctcgcagttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaagtt-gt 26065993  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  26065992 tattggtgtgatttttcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 26068362 - 26068235
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||    
T  26068362 tctcgcagttgttttctactttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaagtt-gt 26068267  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  26068266 tattggtgtgatttttcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 28241286 - 28241163
Alignment:
Q  45 tcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttat 144  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  28241286 tcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttgattgcttgattatctcttgctccacacatcaag-ttgttat 28241191  T
Q  145 tggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||| |||||||||||||| |||||    
T  28241190 tggtgtga-ttttcatcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 1069734 - 1069562
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||  ||||||||||||| |  |||||||||||  |||||||| | | |||||||||||||| ||||||||||||||||||||||||| |||||     
T  1069734 ccgaactgaatcaacaaattcttttatgttctctcttct-tttctctctc-gctgttttctactttttgcttgtgtttataattgttccatacactttg- 1069638  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||| |||| ||| |||| ||||||||| ||||| | ||||||||||||||  ||| ||||||||||| ||||||    
T  1069637 ttttgattgcttgactatcccttgctccatacatcgaatttgttattggtatattttctcatcgaattcacaacag 1069562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 5273183 - 5273055
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||| || |  | ||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  5273183 tctcgccgttgttttctacttttggcttgtatttaaaaat--tacatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 5273087  T
Q  143 attggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||| |||||    
T  5273086 attggtgtgattttttcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 14507143 - 14507018
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  14507143 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 14507048  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| | ||||||||||| ||||||    
T  14507047 attggtgtga-tattcatcgaatttgcaaca 14507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 1230216 - 1230090
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| |||||||||||| ||| | |||||||| ||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |||||    
T  1230216 tctcgccgttgttttatacttttggctt-tgtatttaattgtttcatacacttt-attttggttgcttgattatctcttgatccacacatcaag-ttgtt 1230120  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||    
T  1230119 attggtgtgattttt-atcgaattcgcaaca 1230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13057493 - 13057659
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||| | |||||||  |||||   |||||||||||  ||||| ||||||||||| |  ||  ||| |    
T  13057493 ccgaactcggtcaacaaattcttttgtgttctctctttcttttctctatctgtt---ttctacttttgt-ttgtgattataattgttgcccac--tttta 13057586  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13057587 tt--ggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 19704521 - 19704402
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgatttt-ggttgcctgattatctcttgctccacacatcaagtttgttattggtatga 152  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||| |||    
T  19704521 ttttctacttttggcttgtattta--attgttccatacactttgatttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 19704425  T
Q  153 tttttc-atcgaattcgcaacag 174  Q
    ||| || ||||||||| ||||||    
T  19704424 tttctcgatcgaattcacaacag 19704402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 14466622 - 14466785
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||| ||||||||  ||||||||||||| | |||||||||||| |||||||||||||||  ||||| |||||| | |  |||||  ||||     
T  14466622 ccgaactgggtcagcaaattctcttgtgttctctctttc-tttctctcgctgctgttttctacttttgt-ttgtgattataacttt--catacattttg- 14466716  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| ||| |||| |||||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  14466717 ttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgatttttcatcgaattc 14466785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32280295 - 32280463
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||| |||||||  ||||||||||||||| ||||||||  |||| ||||||||||||||||||| |||||||||||| |  ||   |||     
T  32280295 ccgaacttggtcaaaaaattctcttgtgttctctcttcc-tttctctca-tgttattttctacttttggcttgtatttataattgttacccac---ttg- 32280388  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    | |||||||| |||||||| ||| ||||| ||||||||||||||||| || |||||||| ||||||||| |||||    
T  32280389 tattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattttttatcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 22490921 - 22491073
Alignment:
Q  9 ggtcaacaaattcttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttg 107  Q
    ||||||||||||||| ||| ||||||   |||||| || || ||||||||||||||||||| | |||||||||||||| |  ||   ||| |||||||||    
T  22490921 ggtcaacaaattcttttgtgctctct---ctttctttctctcgttgttttctacttttggcctatgtttataattgttacccac---ttg-ttttggttg 22491013  T
Q  108 cctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    | ||||||||  | ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  22491014 cttgattatccttagctccacacattaagtttgttattggtgtgatttttcatcgaattc 22491073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 30967548 - 30967673
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||| | ||||| |||||||| | ||||||||||||||||||||||||||| |||||    
T  30967548 tctcgccgttgttttctacttttgacttgtattta--attattccatgcactttg-ttttggttacttgattatctcttgctccacacatcaag-ttgtt 30967643  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||| |||||||||||||    
T  30967644 attggtgtga-ttttcaacgaattcgcaaca 30967673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 4816186 - 4816070
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  4816186 ttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 4816091  T
Q  154 ttttcatcgaattcgcaacag 174  Q
    |||| |||  |||| ||||||    
T  4816090 ttttgatcagattcacaacag 4816070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 15541154 - 15540990
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  ||||||||||||   |||||||| | ||||||||||| |||||  ||||| |||||| |||| |  ||   ||| ||    
T  15541154 gaactgggtcaacaaattcttttgtgttctctcttt--tttctctctc-gttgttttctaattttgt-ttgtgattataactgttaccaac---ttg-tt 15541063  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| | ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  15541062 ttggtttcttgactatcccttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaaca 15540990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 26932518 - 26932403
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||| |||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  26932518 ttttctacctttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 26932423  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||||||| ||||| |||||    
T  26932422 ttttcatcaaattcacaaca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 8717268 - 8717195
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 18322493 - 18322566
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  18322493 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatagaattcgcaaca 18322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 22611023 - 22611139
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||| ||||||||||||||||||||   | ||||||| |||||||| ||||||| |  ||||||||||||||||| | |||||||| |    
T  22611023 ttgttttctacttttg-cttgtgtttataattgttcc---cactttgatattggttgcttgattattt--tgctccacacatcaagtattttattggtgt 22611116  T
Q  151 gatttttcatcgaattcgcaacag 174  Q
    || ||||||||||| |||||||||    
T  22611117 ga-ttttcatcgaactcgcaacag 22611139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 25480227 - 25480346
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| |||||| ||||||||||| ||||| |||| |||||||||||  || |||| ||| ||| ||||||||| | | |||||||| ||    
T  25480227 tgttttctacttttgacttgtgattataattgtttcatacacttt-attttggttgctcgactatcccttactctacacatcaaatat-ttattggtgtg 25480324  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| |||||    
T  25480325 atttttcatcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25465606 - 25465444
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||||||   | | |||||    
T  25465606 ccgaactgggtaaacaaattttgtgtgttctctctttc-tttctctcgctgtt---ttctacttttg-cttgagtttataattgttcc---cacgttgat 25465515  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| ||||||  | |||||||| ||||||||| | |||||||| ||| |||||||||||||| |||||    
T  25465514 attggttgcttgatta--ttttgctccatacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 25465444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 13040179 - 13040232
Alignment:
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13040179 ttgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaaca 13040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 30034562 - 30034447
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||| |||||| |||||||   || ||||| |||||  ||||||||| |||||||| ||||||||| |||||||| ||||||||||| |    
T  30034562 ttgttttctacttttagcttgtatttataa--ctttcatacactttg--tttggttgcttgattatc-cttgctccatacatcaag-ttgttattggtgt 30034469  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    || ||||||||||||||||||||    
T  30034468 ga-ttttcatcgaattcgcaaca 30034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||||||| |||  |||| |||| ||||| |||||||||| |||||||   |||||||||||||||||| | |||||| | ||||    
T  17012387 ttttctacttttggcttgtgttt-taac-gttc-atacactttg-ttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgat 17012482  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||||||||||||| |||||    
T  17012483 ttttcatcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26945444 - 26945600
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||| ||||||||| | ||||||||||||||   |||||||||||||||||||||||||   |||| ||| |||||      
T  26945444 ccgaactgggtaaacaaatttcgtgtcttctctctttcttttctctcgctgtt---ttctacttttggcttgtgtttataa--cttccttacactttg-- 26945536  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcga 163  Q
    |||| ||   |||||||  |||| | |||| ||||||| | |||||||| ||||||||||||||    
T  26945537 tttgattctttgattattacttgtttcacatatcaagtgttttattggtgtgatttttcatcga 26945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12186087 - 12186000
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccata 90  Q
    ||||||||||| |||||||| ||  |||||||||||| | ||||||||||||||   ||||||||||  |||||||||||||||||||||||    
T  12186087 ccgaactgggtaaacaaattattttgtgttctctctttc-tttctctcgctgtt---ttctactttttccttgtgtttataattgttccata 12186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 53 - 173
Target Start/End: Complemental strand, 16455394 - 16455280
Alignment:
Q  53 gttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga 152  Q
    ||||||||||||||  |||||||||||||| ||||   | | ||||| |||||||| |||||| || |||||||||| ||||||| | |||||||| |||    
T  16455394 gttttctacttttgt-ttgtgtttataatttttcc---cacgttgatattggttgcttgatta-ct-ttgctccacatatcaagtattttattggtttga 16455301  T
Q  153 tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| |||||    
T  16455300 tttttcatcgaattcacaaca 16455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28078210 - 28078063
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||| |||| |||||||| | |||||||||| || | ||||||||||||||    |||||||||| ||||||||||||||| ||||   | | |||||    
T  28078210 ccgaacagggtaaacaaatttcgtgtgttctctttttc-tttctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgat 28078120  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
     |||||||| ||||||| | |||||||||||||||||| | |||||||| ||||||||    
T  28078119 attggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 28078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3027867 - 3027703
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||| | |||||||| | ||||||||||||| | |||||||||   |||||||||||||||| ||||| |||||||   |||||||| ||||       
T  3027867 ccgaactggataaacaaatttcgtgtgttctctctttc-tttctctcg---ttgttttctacttttgacttgtatttataa--cttccatacacttt--a 3027776  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  ||||||  ||||||||||||||||| | | |||| ||| ||||||||||| |||||| |||||    
T  3027775 tttggttgctcgattattacttgctccacacatcaaatat-ttatcggtgtgatttttcattgaattcacaaca 3027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 20915312 - 20915213
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||| || ||||| ||||| |||||||||| |||||| | ||||| |||||||||||| || |||||||| ||||    
T  20915312 ttttctacttttggcttgtattta--attatttcatacactttg-ttttggttgcttgattaccccttgccccacacatcaag-ttattattggtgtgat 20915217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 10584358 - 10584413
Alignment:
Q  119 cttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  10584358 cttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13040053 - 13040117
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttg 66  Q
    |||||||||||||||||||||  |||||||||||||| | ||||||||   |||||||||||||||||    
T  13040053 ccgaactgggtcaacaaattcttttgtgttctctctttcttttctctc---gttgttttctacttttg 13040117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19696740 - 19696887
Alignment:
Q  1 ccgaactgggtcaacaaa-ttcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||| ||| |||||||||||||  ||||||||||||||  |||||||||||| | |||||||||||| |||  ||  | ||||| |    
T  19696740 ccgaactgggtaaacaaatttcgtgtgttctctctt-tctttctctcgctgt--ttttctactttt-gtttgtgtttataactgt--cacccactttg-t 19696832  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt 156  Q
    || |||||| |||||| || |||||||||||||||||| | |||||||| |||||||    
T  19696833 ttcggttgcttgatta-ct-ttgctccacacatcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 12937208 - 12937126
Alignment:
Q  2 cgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc 87  Q
    ||||| |||| |||||||| | |||||||| |||| | |||||||||   |||||||||||||||| ||||||||||||||||||||    
T  12937208 cgaaccgggtaaacaaattttgtgtgttctatctttcttttctctcg---ttgttttctacttttg-cttgtgtttataattgttcc 12937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 28037630 - 28037576
Alignment:
Q  120 ttgctccacacatcaagt-ttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| || |||||||| |||||||||| ||||||| |||||    
T  28037630 ttgctccacacatcaagtatttttattggtgtgatttttcaacgaattcacaaca 28037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 6610478 - 6610378
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||| |||||||| ||| ||||||||||||||  || | ||||| |||||||||| ||||||| |  |||||||||||| |||| | ||||||||     
T  6610478 gttgttttatacttttg-cttatgtttataattgtt--atccactttg-ttttggttgcttgattattt--tgctccacacattaagtattttattggtg 6610385  T
Q  150 tgatttt 156  Q
    |||||||    
T  6610384 tgatttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 1e-67; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 36402343 - 36402170
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||    
T  36402343 cgaactaggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgat 36402244  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36402243 tttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 2818351 - 2818186
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2818351 ccgaacttggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 2818252  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||    
T  2818251 ttttggatgcctgattatcccttgctccatacatcaagtttgttattggtgtg-tttttcatcgaat 2818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 39854746 - 39854923
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||| |||||||||||||||  |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||     
T  39854746 ccgaactaggtcaacaaattcttttgtgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacacttta 39854845  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
     |||||||||| | | |||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  39854846 tttttggttgcttaactatcccttgctccacatatcaagtttattattggtgtgatttttcatcgaattcgcaacaga 39854923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6745331 - 6745507
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg- 97  Q
    |||||||||||||||||||||||  |||||||||  | | |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||     
T  6745331 ccgaactgggtcaacaaattcttttgtgttctcttattcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgt 6745430  T
Q  98 -attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
      |||||| ||| ||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  6745431 ttttttggctgcttgactatctcttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 6745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6747567 - 6747743
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt--t 96  Q
    |||||||||||||||||||||||  |||||||||  | | |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |    
T  6747567 ccgaactgggtcaacaaattcttttgtgttctcttcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgt 6747666  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    | |||||||||| |||||||||||||||| |||||||||||||||||||||| || ||| ||||| |||||||||||    
T  6747667 gtttttggttgcttgattatctcttgctctacacatcaagtttgttattggtgtgttttctcatccaattcgcaaca 6747743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18511228 - 18511056
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||     
T  18511228 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttg- 18511131  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  18511130 ttttagttgcttgactatcccttgctccacacatcaagtttgttattgatgtgatttatcatcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 41585702 - 41585580
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||     
T  41585702 gttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgccccacacatcaagtttgttattggtg 41585604  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  41585603 tgatttttcatcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2724156 - 2724328
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttcccttt-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||| ||| || ||||||||   |||||||||||||||||||||||||||||||||||| |||||    
T  2724156 ccgaactgggtcaacaaattcttttgtgttctctcttcctttttctttcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg 2724252  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
     |||||||||| |||||||| ||||||  |||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  2724253 -ttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgattttttcatcaaattcgcaaca 2724328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 17818508 - 17818340
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||| |||| |||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  17818508 ccgaactgggtcaacaaattcttttgtgttctcttttcc-tttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg 17818410  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattc 167  Q
     |||||||||| |||||||  |||||||||||||||||||||||||||||| || |||| |||||||||||    
T  17818409 -ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattc 17818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24127119 - 24127291
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||| | |||||||| | ||||||||||||||||| ||| |||||||||||||| ||||| |||||     
T  24127119 ccgaactgggtcaacaaattcttttgtgttctctctttc-tttctctctc-gttgttttctacttttgacttatgtttataattgtttcatacactttgt 24127216  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||| ||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||| |||||    
T  24127217 tttttgttgtctgattatcccttgctccacacattaagtttgttatttgtgtgatttttcatcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31466005 - 31465833
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||||||||||||||| |||  |||||||||  |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  31466005 ccgaactaggtcaacaaattcttttgtattctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttga 31465908  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | |||||  |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  31465907 ttttggttgcttaattattccttgttccacacatcaaatttgttattggtgtgatttttcatcaaattcgcaaca 31465833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16776420 - 16776580
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctc--tcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||||  ||||||||  |||||  |||||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||    
T  16776420 ccgaactgggtcaacaaattcttttgtgttctcgctcttctttttctctcgctgttgttttctacttttggcttgtatt-ataattgtttcatacacttt 16776518  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttca 159  Q
    | ||||| ||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  16776519 g-ttttgattgcctgattattccttgctccacacatcaagtttgttattggtgtgatttttca 16776580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20505859 - 20505687
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  ||||||||||||||   ||||||||   ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20505859 ccgaactgggtcaacaaattcttttgtgttctctctt-attttctctc---gttgttttctagttttggcttgtgtttataattgttccatacactttga 20505764  T
Q  99 --ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
      ||||||||||||||||||  |||||||||||||||||||||||||||||| || ||| |||| |||||| |||||    
T  20505763 ttttttggttgcctgattattacttgctccacacatcaagtttgttattggtgtgttttctcattgaattcacaaca 20505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26098304 - 26098129
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||| |||||||||||||| |  |||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  26098304 ccgaactgagtcaacaaattcttttatgttctctcttcc-tttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg 26098206  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaaca 173  Q
     |||||||||| |||||||  |||||||||||||||||||||| ||||||| |||  ||| |||||||||||||||||    
T  26098205 -ttttggttgcttgattattccttgctccacacatcaagtttgatattggtgtgagttttctcatcgaattcgcaaca 26098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 658372 - 658203
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||| ||||||   ||||||||||||||| ||||||| |||||||| ||| |||||     
T  658372 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctcttgctgtt---ttctacttttggcttatgtttattattgttccgtacactttg- 658278  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  658277 ttttggttgcctgattattccttgctccacacatcaaatttgttattggtgtga-ttttcatcgaattcgcaacag 658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 34530679 - 34530559
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||| ||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttg-ttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtg 34530581  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| |||||    
T  34530580 atttttcatcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 3373104 - 3372977
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  3373104 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 3373008  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  3373007 attggtgtgatttttcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6756755 - 6756926
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||| ||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||||||||| ||||| |||||     
T  6756755 ccgaactgagtcaacaaaatcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgtttcatacactttg- 6756851  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaag-tttgttattggtatgatttttcatcgaattcgcaac 172  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||| || ||| ||||||||||||||||    
T  6756852 ttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgtgttttctcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 18469321 - 18469448
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  18469321 tctcgccgttgttttctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgtt 18469417  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||| |||||    
T  18469418 attggtatgatttttcatcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36208839 - 36209007
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgtt-ctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| ||||||||||| |||| ||||||| | |||||||||   ||||||||||||||||||||||| |||||||||||| |||| ||||| |    
T  36208839 ccgaactgggtaaacaaattcttttgtttctctctttc-tttctctcg---ttgttttctacttttggcttgtgattataattgttctatacactttg-t 36208933  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||| ||||||| ||||||||||||| |||||| | |||||||||||||||||| |||||    
T  36208934 tttggttgcttgattatcacttgctctacacatcaagtttattattgatgtgatttttcatcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40221786 - 40221956
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct-tccctttctctcgctgt-----tgttttctacttttggcttgtgtttataattgttccatacgct 94  Q
    |||||||||||||||||||| || ||| |||||| | |||||||||| || |     |||||||||||||||||||||||||||||||||||||||| ||    
T  40221786 ccgaactgggtcaacaaattattttgtgctctctcttcctttctctctctctctcgctgttttctacttttggcttgtgtttataattgttccatacact 40221885  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    ||| |||||||||| ||| ||||  ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  40221886 ttg-ttttggttgcttgactatcctttgctccacacatcaagtttgttattggtgtgatttttcatcaaatt 40221956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18596909 - 18597079
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||| ||||||  ||||||  ||||||  ||||||||||||||   ||||||||||| |||||||||||||||||||||||| ||||     
T  18596909 ccgaactgggtcaacagattcttttgtgttcgactcttct-tttctctcgctgtt---ttctacttttgacttgtgtttataattgttccatacacttt- 18597003  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| || ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  18597004 attttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtgatttttcatcgaatttgcaaca 18597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 21289024 - 21289187
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||| |||| ||||| |  ||  |||| | ||||||||||||||||||||||||||||| ||| |||||||| ||||| ||    
T  21289024 ccgaactgggtcaacaaattcttttgttttctct-cttttgttctctc-gttgttttctacttttggcttgtgtttattattcttccatacactttg-tt 21289120  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||| ||| |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21289121 ttggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgatttttcatcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 37705796 - 37705626
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||| | | ||||||||||||||||||||||||| ||||| |||||||  ||||| ||    
T  37705796 ccgaactaggtcaacaaattcttgcgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttttaattattccatatactttg-tt 37705700  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||| || ||||  |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  37705699 ttggttgcttggttattccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1189623 - 1189454
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |  |||||||||||||||||||||||||||||||||||||||  ||||     
T  1189623 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gcagttttctacttttggcttgtgtttataattgttccatacattttg- 1189527  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| || |||||||  |||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||    
T  1189526 ttttggtggcttgattattccttgctccacacatcaagtttgatattggtgtg--ttttcatcgaattcacaaca 1189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 2954679 - 2954843
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgttt-ataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||   ||||||||||||||||||||  ||||||||||||||| |||||    
T  2954679 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgttacataattgttccatacactttg 2954774  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
     ||||||||| ||||||||| ||| ||||||||||||| |||||||||||| || ||| |||||||||||    
T  2954775 -ttttggttgtctgattatcacttactccacacatcaaatttgttattggtgtgttttctcatcgaattc 2954843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 21948291 - 21948464
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttcccttt---ctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    |||||||||||||||||||||  |||||||||||||| ||    ||||| || | | |||||||||||||||||||||||||||||||||||||| ||||    
T  21948291 gaactgggtcaacaaattcttttgtgttctctcttcctttctccctctctctcgctattttctacttttggcttgtgtttataattgttccatacacttt 21948390  T
Q  97 gatttt-ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgc 169  Q
      |||| |||||| |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  21948391 attttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgc 21948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 34477020 - 34476894
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  34477020 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 34476924  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  34476923 attggtgtga-ttttcatcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 38882400 - 38882528
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  38882400 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 38882495  T
Q  143 attggtatgatttttcatcgaattcgcaacagaa 176  Q
    |||||| ||| |||||||||||||||||||||||    
T  38882496 attggtgtga-ttttcatcgaattcgcaacagaa 38882528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 696141 - 696310
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||| || |||  |||||   |||||| || |||||||||||||||||||  |||||||||||| |||||||||| |||| |||    
T  696141 ccgaactgggtcaacaaattattttgtgttctct---ctttctttctctgttgttttctacttttgt-ttgtgtttataactgttccatacacttt-att 696235  T
Q  101 ttgg-ttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||| || | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  696236 ttggttttcttgattatctcttgctccacacatcaagtctgttattggtatgattttctcatcgaattcacaaca 696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10529065 - 10528937
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  10529065 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatcccttgcttcacacatcaag-ttgtt 10528969  T
Q  143 attggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||| ||||||| ||||||||||| |||||    
T  10528968 attggtgtgattttctcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18509334 - 18509201
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  18509334 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg- 18509237  T
Q  99 ttttggttgcctgattatctcttgctccacacatca 134  Q
    |||||||||  ||| |||| ||||||||||||||||    
T  18509236 ttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17073147 - 17073296
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtg--ttctctc-ttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||||||||||||||||| ||  ||||||| ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  17073147 ccgaactgggtcaacaaattcttttgctttctctctttatttttctctcgctgttgttttctacttttgacttgtgtttataattgttccatacactttg 17073246  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
     |||| ||||| |||| ||| ||||||||||||||||| ||| ||||||||    
T  17073247 -ttttagttgcttgatcatcacttgctccacacatcaaatttattattggt 17073296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20043253 - 20043397
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||||||  |||||||||||| | ||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||     
T  20043253 ccgaactgggtaaacaaattcttttgtgttctctctttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg- 20043348  T
Q  99 ttttggttgcctga-ttatctcttgctccacacatcaagtttgttattg 146  Q
    |||||| ||| ||| ||||| ||||||||||| ||||||||||||||||    
T  20043349 ttttggctgcttgatttatcacttgctccacaaatcaagtttgttattg 20043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 25804336 - 25804463
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  25804336 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 25804431  T
Q  143 attggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||| |||| |||||||||||| |||||||    
T  25804432 attggtgtgatattttcatcgaatacgcaaca 25804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10474339 - 10474176
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| | | |  ||||||||||| ||||||||||||||||||||||||| |||||     
T  10474339 ccgaactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctaatttctacttttcgcttgtgtttataattgttccatacactttg- 10474243  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    |||||||| | |||||||  ||||||||||||||||||||| |||||| | | ||||||||||||||    
T  10474242 ttttggttacttgattattccttgctccacacatcaagtttattattgatgtaatttttcatcgaat 10474176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 10750011 - 10750137
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  10750011 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 10750107  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||| ||||||||| |||||    
T  10750108 attggtgtga-ttttgatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 10757487 - 10757613
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  10757487 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 10757583  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||| ||||||||| |||||    
T  10757584 attggtgtga-ttttgatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 18466996 - 18467123
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||| ||||| ||||| |||| |||||||| ||||||||||||||||||||||||    
T  18466996 tctcgccgttgttttctacttttggcttgtatttataact--tccatacactttg-ttttgattgcttgattatcccttgctccacacatcaagtttgtt 18467092  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    ||| || |||||||||||||||||| |||||    
T  18467093 attagtgtgatttttcatcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 34479385 - 34479259
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||  ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  34479385 tctcgccgttgttttctacttttggcttgcattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 34479289  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||| |||||||||||    
T  34479288 attggtgtga-ttttcatcaaattcgcaaca 34479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26097994 - 26098127
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| || | | |||||||||||||||||| ||||||||||||||||||||| |||||     
T  26097994 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctatctc-gctgttttctacttttggctagtgtttataattgttccatacactttg- 26098090  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaa 135  Q
    |||||||||| ||| |||| |||||||||||||||||    
T  26098091 ttttggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 38960091 - 38959971
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||||     
T  38960091 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtg 38959996  T
Q  150 tgatttttcatcgaattcgcaacag 174  Q
    |||||||||||||||||||||||||    
T  38959995 tgatttttcatcgaattcgcaacag 38959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 39798342 - 39798468
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| ||||||||||||||||| || |||    
T  39798342 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaaatt-gtt 39798437  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  39798438 attggtgtgatttttcatcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 20045298 - 20045395
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  20045298 gttgttttttacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 12555880 - 12555757
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||| |||||||  ||||||||||||||||| ||||||||||||     
T  12555880 gttgttttctacttttggcttgtgattataattgtttcatacacttt-attttggttgcttgattattccttgctccacacatcaaatttgttattggtg 12555782  T
Q  150 tga--tttttcatcgaattcgcaac 172  Q
    |||  ||| ||||||||||| ||||    
T  12555781 tgagttttctcatcgaattcacaac 12555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 27912848 - 27912969
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||||||    
T  27912848 tctcgccgttgttttctacttttagcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttactccacacatcaagtttgtt 27912944  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    ||||||  |||||||||||||||||    
T  27912945 attggtgggatttttcatcgaattc 27912969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 23741813 - 23741693
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  23741813 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 23741717  T
Q  154 ttttcatcgaattcgcaacagaac 177  Q
    ||||| |||||||| |||||||||    
T  23741716 ttttcgtcgaattcacaacagaac 23741693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 10587127 - 10587252
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  10587127 tctcgccgttgttttctacttttgacttgtatttataact--tccatacactttg-ttttggttgcttgattatc-cttgctccacacatcaagtttgtt 10587222  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  10587223 attggtgtga-ttttcatcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25904366 - 25904536
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||| ||  |||||||||||||| |||||||| | | |||||||||||||||| ||||||||||||||||||||||| |||||     
T  25904366 ccgaactaggtcaacaaattattttgtgttctctcttcc-tttctctctc-gctgttttctacttttggtttgtgtttataattgttccatacactttg- 25904462  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||  |||| ||| |||| ||||| ||||||||||| ||| ||| |||| || ||| |||||||||||||||||    
T  25904463 ttttcattgcttgactatcccttgcaccacacatcaaatttatta-tggtgtgttttctcatcgaattcgcaaca 25904536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 27910745 - 27910872
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| ||||||| |||||| ||||||| |  ||||||| |||| ||||||||||  |||||||| ||||||||||||||||| ||||||    
T  27910745 tctcgccgttgttttatacttttagcttgtatttataact--tccatacacttt-attttggttgattgattatcccttgctccacacatcaaatttgtt 27910841  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  27910842 attggtgtgatttttcatcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 16092213 - 16092045
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||| |||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||| ||||| ||||||||||||  |||||  |    
T  16092213 gaactggatcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgcgtttacaattgttccatatactttg--t 16092118  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| ||||  |||||||||| ||||||||||||||||||  | ||| ||||||||||| |||||    
T  16092117 ttggttgcttgactatccattgctccacatatcaagtttgttattggtgcgttttctcatcgaattcacaaca 16092045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 21684412 - 21684293
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||| | ||||  |||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||     
T  21684412 gttgttttctacttttggcttttattta--attgttccatacactttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtg 21684317  T
Q  150 tgatttttcatcgaattcgcaacag 174  Q
    ||| |||||||||||||||||||||    
T  21684316 tga-ttttcatcgaattcgcaacag 21684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31179387 - 31179213
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttct-ctcttccct---ttct-ctcgctgttgtt-ttctacttttggcttgtgtttataattgttccatacgct 94  Q
    ||||||||||||||||||||  |||||||| ||||||  |   |||| ||||| |||||| ||||||||||||||||||||||  ||| |||||||| ||    
T  31179387 ccgaactgggtcaacaaatttctgtgttcttctcttctttgtgttcttctcgccgttgttcttctacttttggcttgtgttta--attattccatacact 31179290  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||| |||||||||| | |||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||    
T  31179289 ttg-ttttggttgcttaattatcccttgctccatacatcaagtt-gttattggtgtgatttttcatcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 4236947 - 4237065
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||     
T  4236947 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgcttcacacatcaag-ttgttattggtg 4237042  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||| |||||| ||||||| |||||    
T  4237043 tga-ttttcaacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 15354530 - 15354414
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  15354530 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 15354434  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  15354433 ttttcgtcgaattcacaaca 15354414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 15356806 - 15356690
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  15356806 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 15356710  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  15356709 ttttcgtcgaattcacaaca 15356690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 23665368 - 23665484
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  23665368 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 23665464  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  23665465 ttttcgtcgaattcacaaca 23665484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 23793219 - 23793103
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  23793219 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 23793123  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  23793122 ttttcgtcgaattcacaaca 23793103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 25921440 - 25921333
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  25921440 tctcgccgttgttttctacttttggcttgtattta--attgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaag-ttgtt 25921345  T
Q  143 attggtatgatt 154  Q
    |||||| |||||    
T  25921344 attggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 2175213 - 2175341
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  2175213 tctcgccgttgttttctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 2175308  T
Q  143 attggtatga--tttttcatcgaattcgcaaca 173  Q
    |||||| |||  ||||| ||||||||| |||||    
T  2175309 attggtgtgacttttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 4410343 - 4410458
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||||||||| ||||||| |  ||||||| | ||  |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||    
T  4410343 tgttttctacttttggcttgtatttataact--tccatacacctt--ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 4410437  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    | |||||| |||||||||||||    
T  4410438 a-ttttcaacgaattcgcaaca 4410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 31543047 - 31543153
Alignment:
Q  44 ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtta 143  Q
    ||||| ||||||||||||||||||||||| |||||||   || ||||||||||| |||||||||| |||||| | |||||||||||||||||| ||||||    
T  31543047 ctcgccgttgttttctacttttggcttgtatttataa--ctttcatacgctttg-ttttggttgcttgattaacccttgctccacacatcaag-ttgtta 31543142  T
Q  144 ttggtatgatt 154  Q
    ||||| |||||    
T  31543143 ttggtgtgatt 31543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15143731 - 15143896
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||| ||||| |||||||| | |||||||||||| |  ||||||||||| || |||||||||||| | ||||||||||||||||||||    | || ||    
T  15143731 ccgaaatgggtaaacaaatttcgtgtgttctctctact-tttctctcgctatt-ttttctactttttgtttgtgtttataattgttcca----cgttaat 15143824  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| |||||| || || ||||||||||||| | | ||||||||||||||||||| ||||||| |||||    
T  15143825 attggttgcttgatta-ct-ttactccacacatcaattattttattggtatgatttttcaacgaattcacaaca 15143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 6661155 - 6661038
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||||||||||| |  ||||||| |||| ||||||||||| |||||||  ||||||||||||||||| | | | ||||||     
T  6661155 gttgttttctacttttg-cttgtgtttataact--tccatacacttt-attttggttgcttgattattacttgctccacacatcaaatatttaattggtg 6661060  T
Q  150 tgatttttcatcgaattcgcaac 172  Q
    ||| |||||||||||||| ||||    
T  6661059 tga-ttttcatcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 39397970 - 39397857
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| |       | |||||||||||| |||||||||| |||||| ||    
T  39397970 tgttttctacttttggcttgagtttataattgtttcatacactttg-ttttggttgtc-------cacttgctccacacgtcaagtttgtaattggtgtg 39397879  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||| || |||||||| |||||    
T  39397878 atttctcgtcgaattcacaaca 39397857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 31472531 - 31472458
Alignment:
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg-atttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||||||| || ||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  31472531 ttggttgcttgagtatctcttacttcacacatcaagtttgttatcggtgtgtatttttcatcgaattcgcaaca 31472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 31545395 - 31545502
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||||   || |||||||||| |||||  |||| |||||| | ||| |||||||||||||| |||||    
T  31545395 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacgcttt-attttaattgcttgattaacccttactccacacatcaag-ttgtt 31545490  T
Q  143 attggtatgatt 154  Q
    |||||| |||||    
T  31545491 attggtgtgatt 31545502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 20054100 - 20054267
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| || |||||||||||  |||||||||||| | ||||||||    | ||||||||||||||  |||||||||||| | |  ||||| |||||     
T  20054100 ccgaactgcgtaaacaaattcttttgtgttctctctttcttttctctct---tcgttttctacttttgt-ttgtgtttataacttt--catacactttg- 20054192  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||  ||||||| ||||||||||| | ||||| || |||||||| ||||||||| ||||||    
T  20054193 ttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattttt-atcgaattcacaacag 20054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 15552569 - 15552685
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga- 152  Q
    |||||||||||| |||||| |||||||   || ||||| ||||| |||| ||||| |||||||| ||| || ||| ||||||| ||||||||||| |||     
T  15552569 ttttctacttttagcttgtatttataa--ctttcatacactttg-ttttagttgcttgattatcccttacttcacgcatcaag-ttgttattggtgtgat 15552664  T
Q  153 tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| |||||    
T  15552665 tttttcatcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 2144561 - 2144504
Alignment:
Q  23 tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgtt 85  Q
    ||||||||||||| | ||||||||||||||   ||||||||||| ||||||||||||||||||    
T  2144561 tgtgttctctctttc-tttctctcgctgtt---ttctacttttg-cttgtgtttataattgtt 2144504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 23667644 - 23667725
Alignment:
Q  55 tttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    ||||||||||||||| || ||||  ||  ||||||||||||||| ||||||||| | | |||| || || ||||||||||||||    
T  23667644 tttctacttttggctcgtattta--atcattccatacgctttgagtttggttgcttaactatccctcgccccacacatcaagtt 23667725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18096914 - 18096740
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||||||| |||||||  |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18096914 ccgaacttggtcaacgaattcttttgtgttctctcttctttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 18096815  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18096814 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32219328 - 32219503
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32219328 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 32219427  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  32219428 ttttggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgattttttcatcgaattcacaaca 32219503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 24979952 - 24980127
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  24979952 cgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgttgttgtttttctacttttggcttgtgtttataattgttccatacactttga 24980051  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||    
T  24980052 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacag 24980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18099184 - 18099010
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||||||| |||  | ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18099184 ccgaactgggtcaacaaattcttttgtgttctcttttctttctctctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttga 18099085  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  18099084 tttttgttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36012070 - 36012243
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||     
T  36012070 ccgaactggatcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttg- 36012168  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  36012169 ttttggttgtttgattatcccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 53915508 - 53915336
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||    
T  53915508 gaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttgg-tt 53915411  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||||| ||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  53915410 ttggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaga 53915336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 53917678 - 53917506
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  53917678 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg- 53917581  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  53917580 ttttggttgcttgactatcccttgctccacacatcaagtttgttattagtgtgatttttcatcgatttcgcaaca 53917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 43226328 - 43226495
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||| |||   ||    
T  43226328 ccgaactgggtcaacaaattcttgtgttctctcttccttttctctcgctgttg-tttctacttttggcttgtattt-taattgttccatacactt--gtt 43226423  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  43226424 ttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttctcatcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 18162907 - 18163074
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||| ||||||||||| ||  |||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18162907 cgaactgtgtcaacaaatttttttgtgttctctcttctttttctctcgctgcagttttctacttttggcttgtgtttataattgttccatacactttgat 18163006  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||||||||||| ||| ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  18163007 tttggttgcctgattatcccttactccacacatcaaatttattattggtgtgatttttcatcgaattc 18163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3314928 - 3315100
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||||| |||||     
T  3314928 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacgtttggcttgtgtttataattgttccatacactttgc 3315025  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||| || ||| |||||||||||||||||    
T  3315026 ttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgttttctcatcgaattcgcaaca 3315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 25688174 - 25687997
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||| || |||||  |||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  25688174 ccgaactgggtcaaaaagttcttttgtgttctctcttccttttctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacactttga 25688075  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaacag 174  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||  ||| |||||||||| |||||||    
T  25688074 ttttggttgtctgattatcacttgctccacacataaagtttgttattggtgtgagttttctcatcgaatttgcaacag 25687997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43421429 - 43421260
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||   || ||||||||||||||||||||||||||||||||| |||||     
T  43421429 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttatacttttggcttgtgtttataattgttccatacactttg- 43421335  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  43421334 ttttggttgcttgactatatcttgctccacacatcaactttgttattggtgtgatttttcatcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43423477 - 43423308
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||     
T  43423477 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacactttg- 43423383  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  43423382 ttttggttgcttgactatcccttgctccacacatcaactttgttattggtgtaatttttcatcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 4308295 - 4308122
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  4308295 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg- 4308197  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||||||   ||||||  |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  4308196 ttttggttgttggattattccttgctccacacatcaag-ttgttattggtgtgatattttcatcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 1313652 - 1313822
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   |||||||||||||||| |||||||||||||||||||||||| |||||     
T  1313652 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttgacttgtgtttataattgttccatacactttg- 1313746  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  1313747 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgagtttttcatcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27101195 - 27101028
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||     
T  27101195 ccgaactggatcaacaaattcttttgtgttctctcttccttttctcttgctgttgttttctactttttgcttgtgattataattgttccatacactttg- 27101097  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattc 167  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  27101096 ttttggttgcctgattattcattgctccacacatcaag-ttgttattggtgtgatattttcatcgaattc 27101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43228534 - 43228696
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||| || ||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||     
T  43228534 ccgaactggatcaacaaattcttttgtgttctctcttcctttactctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttg- 43228631  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  43228632 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttctcatcgaa 43228696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 27635672 - 27635497
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||  ||||||||||||||| |||  | || || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  27635672 ccgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg 27635573  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
     |||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  27635572 -ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttctcatcgaatttgcaaca 27635497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 32264029 - 32263877
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||    
T  32264029 ttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtctgattatcactt 32263933  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaac 177  Q
    |||||||||||||| ||||||||| || ||||||||| |||||||| |||||||||    
T  32263932 gctccacacatcaaatttgttattagtgtgatttttcttcgaattcacaacagaac 32263877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12267989 - 12267818
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||     
T  12267989 ccgaactgggtcaacaaattcttttgtgttctctcttc--tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg- 12267894  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| ||| |||  | ||||||||||||||| |||||||||||| | |||||||||||| ||| ||||||    
T  12267893 ttttggttgcttgactattccctgctccacacatcaaatttgttattggtgtaatttttcatcgagttcacaacag 12267818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42990547 - 42990717
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||| || ||||| ||||| ||||||||||||||||||||||| ||||||| |  | ||||| |||||    
T  42990547 ccgaactgggtcaacaaattcttttgtgttctctct-ccttttcttctcgccgttgttttctacttttggcttgtatttataact--tacatacactttg 42990643  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42990644 -ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 45883183 - 45883357
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  ||||||||||||| |||  | || || | |||||||||||| ||||||||| ||||||||||||||||| |||||    
T  45883183 ccgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctcttgctgttttctacttctggcttgtgattataattgttccatacactttg 45883282  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||||| | | |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  45883283 -ttttggttgcttaactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaatttgcaaca 45883357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 9604621 - 9604446
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttc--cctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt 96  Q
    ||||||| |||||||||||||||  |||||||||||||  | |||||||||||||||||||||| ||||||| |||| ||||||||||| ||||| ||||    
T  9604621 ccgaactaggtcaacaaattcttttgtgttctctcttcttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacacttt 9604522  T
Q  97 gattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |  ||||||| | |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  9604521 g-gtttggttacttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaacag 9604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 1321771 - 1321897
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  1321771 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcctgattatcccttgctccacacatcaagtttgtt 1321867  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  1321868 attggtgtga-ttttcatcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15781122 - 15781294
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct-tccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||| |||| ||||| | | |||||||| | ||||||||||||||||| ||||||||||||| |||||||||| |||| ||    
T  15781122 ccgaactgggtcaacaaattcttttgttttctctcttcttttctctctc-gttgttttctacttttgacttgtgtttataactgttccatacacttt-at 15781219  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||  ||| |||||||| ||| |||||||||||||||||||||||||| || |||| |||||||||| ||||||    
T  15781220 tttgcctgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttccatcgaattcacaacag 15781294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6484603 - 6484773
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  ||||||||||||||    ||||||| | | ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  6484603 ccgaactgggtcaacaaattcttttgtgttctctctt---attctctctc-gctgttttctacttttgacttgtgtttataattgttccatacactttga 6484698  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | |||||  ||||||||||||||||| ||||||||| || |||||||| || |||||| |||||    
T  6484699 ttttggttgcttaattattccttgctccacacatcaaatttgttattagtgtgattttttattgaattcacaaca 6484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41849302 - 41849470
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | ||||||||||||||||||||||| ||||||| | |  ||||| |||||     
T  41849302 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctctc-gttgttttctacttttggcttgtatttataacttt--catacactttg- 41849397  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  41849398 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 11168393 - 11168519
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  11168393 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 11168489  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  11168490 attggtgtga-ttttcatcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28181247 - 28181417
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||||||||||||||  ||||||||||||| | ||||||| |  | |||||||||||||||||||||||||||||||||||||||| |||||     
T  28181247 ccgaactaggtcaacaaattctcctgtgttctctctt-cttttctct-gtcgctgttttctacttttggcttgtgtttataattgttccatacactttg- 28181343  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||||| ||||||||  |||||||| |||||    
T  28181344 ttttggttgtttgattgtc-cttgctccacacatcaagtttgttattggtgtgatttttgttcgaattcacaaca 28181417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1626697 - 1626525
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| | ||||||||  ||||||| |||||||||||||||||||||||| |||||     
T  1626697 ccgaactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgtttttcacttttgacttgtgtttataattgttccatacactttgt 1626600  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    ||||| |||| |||||||  |||||||||||||||||||||||||||||| || |||| | || ||||||||||||    
T  1626599 ttttg-ttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttcttatggaattcgcaaca 1626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 747050 - 747177
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  747050 tctcgcagttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 747146  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  747147 attggtgtgatttttcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 5926778 - 5926615
Alignment:
Q  1 ccgaactgggtcaacaaattctt-gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||| | ||||||||||||||||| |||||||||||||||||||| ||| ||||| |    
T  5926778 ccgaactgggtcaacaaattctttgtgttctcttttcc-tttctctctc-gttgttttctacttttg-cttgtgtttataattgttccttacactttg-t 5926683  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||| | |||||||  ||| || ||||||| ||||||||||||||| ||| ||||||||||||||    
T  5926682 tttggttacttgattattccttacttcacacatgaagtttgttattggtgtgagttttcatcgaattc 5926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 6065760 - 6065633
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  6065760 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 6065664  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  6065663 attggtgtgatttttcatcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 25533717 - 25533842
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||| |||    
T  25533717 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgat-atctcttgctccacacatcaagtt-gtt 25533811  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  25533812 attggtgtgatttttcatcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 50494291 - 50494417
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||    
T  50494291 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatctcttgctccacacatcaag-ttgtt 50494386  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  50494387 attggtgtgatttttcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 51726972 - 51726847
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  51726972 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattat-tcttgccccacacatcaag-ttgtt 51726877  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  51726876 attggtgtga-ttttcatcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 51943613 - 51943758
Alignment:
Q  1 ccgaactgggtcaacaaat--tcttgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||  ||||||||||||||||| |||  | || || | ||||||||||||||||||||||||||||||||||||| || |||||    
T  51943613 ccgaactgggtcaacaaattctcttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccaaacactttg 51943712  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttat 144  Q
     |||||||||| ||| |||| ||||||||||||||||||||||||||    
T  51943713 -ttttggttgcttgactatcccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 38890332 - 38890441
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  38890332 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 38890428  T
Q  143 attggtatgattt 155  Q
    |||||| ||||||    
T  38890429 attggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 47701684 - 47701522
Alignment:
Q  2 cgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||||||| ||||||||||||| ||   |||||| ||||||||||    ||||||||||||||||||||||||| ||||||||||||||| ||||| |||    
T  47701684 cgaactggatcaacaaattcttttgcgttctctttcctttctctca---ttgttttctacttttggcttgtgttcataattgttccatacactttg-ttt 47701589  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    | ||||| |||||||  |||| ||   |||||||||||||||||||| ||||||||||||||||||||||    
T  47701588 tcgttgcttgattattacttgatc---acatcaagtttgttattggtgtgatttttcatcgaattcgcaa 47701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 54691586 - 54691417
Alignment:
Q  3 gaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||| |||| |||||||||| |  ||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||  |||| ||    
T  54691586 gaactaggtcgacaaattcttttatgttttctcttcc-tttctctctcggttgttttctacttttggcttgtgtttataattgtttcatacattttg-tt 54691489  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||| |||||||||||||| || |||||||||| | || ||| ||||||||||| |||||    
T  54691488 ttggttgcctgattatcacttgctccacacat-aaatttgttattgatgtgttttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 53468467 - 53468295
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | | ||||||||||||| |||||||||||||||||||||||| |||||     
T  53468467 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctattttctacttttgacttgtgtttataattgttccatacactttg- 53468371  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||| |||   |||||   ||||||||||||||||||||||||||||| || |||| |||||||||| ||||||    
T  53468370 ttttggctgctccattattcattgctccacacatcaagtttgttattggtgtggttttctcatcgaatttgcaaca 53468295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 880465 - 880302
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||| ||||||||||||||||||  |||||||||||||  ||||||||||||||   |||||||||||| ||||| |||||| |||||||||| |||||     
T  880465 ccgagctgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggtttgtgattataactgttccatacactttg- 880371  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaatt 166  Q
    |||||||||| ||||||   |||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  880370 ttttggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtgattttttcatcgaatt 880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 6063410 - 6063283
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||| | |||||| |||| ||||||||||||| |||||    
T  6063410 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttgattttggttgcttaattatcccttgttccacacatcaag-ttgtt 6063314  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    || ||| ||||||||||||||||||||||||    
T  6063313 atcggtgtgatttttcatcgaattcgcaaca 6063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 47148909 - 47148743
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||| ||  |||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||| |||||     
T  47148909 ccgaactaggtcaacaaattattctgtgttctctcttcc-tttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacactttg- 47148813  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||||||  ||||||||       |||||||||||||||||||||||| ||| |||||||| ||||| |||||||    
T  47148812 ttttggttgtttgattatc-------ccacacatcaagtttgttattggtgtgagttttcatcaaattcacaacaga 47148743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 28102013 - 28101848
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||| |||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||| |||||||||  |||| |  || | |||||||||    
T  28102013 aactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttgggttgtgttta--attgct--atccactttgattt 28101920  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  28101919 tggttgcttgattatcccttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 51674780 - 51674608
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc-tttg 97  Q
    ||||||| |||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||| ||||||||||| |  |||    
T  51674780 ccgaacttggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttatatttgttccatacccacttg 51674683  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
      ||||||||| |||||||  ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||    
T  51674682 --tttggttgcttgattattccttgctccatacatcaagtttgttattggtgtgattttctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 3307003 - 3307177
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| ||| |||||||||||  |||||||||||||| |||||||  | | |||||||||||||||||||||||||||||||||| ||||| |||||     
T  3307003 ccgaactaggttaacaaattcttttgtgttctctcttcc-tttctctttc-gctgttttctacttttggcttgtgtttataattgtttcatacactttgt 3307100  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaag-tttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||| |||  |||||||| |||||| || |||||||| |||||||||||| || ||| ||||||||||| ||||||    
T  3307101 ttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgtgttttctcatcgaattcacaacag 3307177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5886441 - 5886618
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttc-tctcgc---tgttgttttctacttttggcttgtgtttataattgttccatacgct 94  Q
    |||||||||||||||||||||  ||||||||||| |||  |||| ||| ||   ||||||||||||||||||||||||| |||||| |||||||||| ||    
T  5886441 ccgaactgggtcaacaaattcttttgtgttctctattctttttcttcttgctgttgttgttttctacttttggcttgtgattataactgttccatacact 5886540  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    |||  ||||||||| || ||||| |||||||||||||||||| ||||||||||| |||||||  || ||||||||||||||    
T  5886541 ttg--tttggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgatttttctcgtcgaattcgcaaca 5886618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5899914 - 5900091
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctg---ttgttttctacttttggcttgtgtttataattgttccatacgct 94  Q
    |||||||||||||||||||||||  ||||||||| |||  ||||| || ||||   ||||||||||||||||||||||| |||||| |||||||||| ||    
T  5899914 ccgaactgggtcaacaaattcttttgtgttctctattctttttcttcttgctgctgttgttttctacttttggcttgtgattataactgttccatacact 5900013  T
Q  95 ttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaaca 173  Q
    |||  ||||||||| || ||||| |||||||||||||||||| ||||||||||| |||||||  || ||||||||||||||    
T  5900014 ttg--tttggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgatttttctcgtcgaattcgcaaca 5900091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6232043 - 6232208
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  | |||||||||||| |||   | ||||| |||||||||||||||||||||||| |||| |    
T  6232043 ccgaactgggtcaacaaattcttttgtgttctctcttctttctctctcgctgtttttt---atttttgacttgtgtttataattgttccatacacttt-a 6232138  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||    || ||||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  6232139 ttttggttgcttgatta----ttactccacacatcaaatttgttattagtgtga-ttttcatcgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 7606570 - 7606443
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  7606570 tctcgctgttgttttctactttttggcctgtattta--attgttccatacactttgattttggttgcttgactatctcttgctccacacatcaag-ttgt 7606474  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| | ||||||||||||||| ||||||    
T  7606473 tattggtgt-atttttcatcgaatttgcaaca 7606443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10955992 - 10955867
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  10955992 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 10955897  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  10955896 attggtgtga-ttttcatcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10958288 - 10958163
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  10958288 tctcgccgttgttttctacttttggcttgtattta--attgttctatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 10958193  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  10958192 attggtgtga-ttttcatcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 5191951 - 5192066
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |    
T  5191951 ttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 5192046  T
Q  151 gatttttcatcgaattcgcaa 171  Q
    || ||||||||||||||||||    
T  5192047 ga-ttttcatcgaattcgcaa 5192066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 10191324 - 10191151
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttct-ctcttccct---ttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||| ||||||||| ||||||  |   |||| ||||| ||||||||||||||||||||||| ||||  ||||| |||||| |||    
T  10191324 ccgaactgggtcaacaaattattgtgttcttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtattta--attgtcccatacactt 10191227  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    || |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||||||||  |||||||||||    
T  10191226 tg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcagattcgcaacag 10191151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 10084354 - 10084228
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  10084354 tctcgccgttgttttctacttttggcttgtattta--attgtcccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 10084259  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| ||||||||| |||||||||||    
T  10084258 attggtgtga-ttttcatcggattcgcaacag 10084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 456200 - 456325
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  456200 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 456295  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  456296 attggtgtga-ttttcatcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 458577 - 458702
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  458577 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 458672  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  458673 attggtgtga-ttttcatcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 38210663 - 38210789
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| ||||| |||  |||| ||| |||||||||||||||||||| |||    
T  38210663 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttgtttgtttgataatcccttgctccacacatcaagtt-gtt 38210758  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  38210759 attggtgtgatttttcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4666757 - 4666922
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||| |||||||||||||  |||||||||||||  |||||||| | | |||||| ||||||||| |||| |||||||||||| ||||| |||| |    
T  4666757 ccgaactggatcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttatacttttggtttgtttttataattgtttcatacacttt-a 4666853  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||| |||| ||| ||| ||||||||||||| ||| |||||||| ||||||||| || |||||    
T  4666854 ttttggttgcatgataatcacttactccacacatcaaatttattattggtgtgatttttcttcaaattc 4666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 25389198 - 25389326
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  ||| |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||    
T  25389198 tctcgccgttgttttctactttttggcttgtattta--attattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgt 25389293  T
Q  142 tattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||||| ||||||||||||||| |||||    
T  25389294 tattggtatgattttttcatcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 880251 - 880087
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    |||| |||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||| ||||| |||||| |||| ||||| ||||| |||    
T  880251 aactaggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggtttgtgattataactgtttcatacactttg-ttt 880157  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgca 170  Q
    |  |||| |||||||  ||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  880156 tctttgcttgattattccttactccacacatcaagtttattattggtgtgactttttcatcgaattcgca 880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 10621494 - 10621366
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-gattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||| |||| | |||||||||| | |||||| |||||||||||||||||| ||||    
T  10621494 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttggtttttggttgcttaattatcccttgctccacacatcaag-ttgt 10621398  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  10621397 tattggtgtgatttttcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 22114258 - 22114143
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||| |||     
T  22114258 ttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgctattggtgtga- 22114163  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  22114162 ttttcatcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 28761406 - 28761287
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| |||||| ||||||||  ||||||| |||| ||||||||||  |||||||| |||||||||||||||||| || ||||||||     
T  28761406 gttgttttctacttttg-cttgtgattataatt--tccatacacttt-attttggttgtttgattatcacttgctccacacatcaagattattattggtg 28761311  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||| |||||    
T  28761310 tgatttttcatcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 48361684 - 48361538
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  ||||||||||||| |||  | || || ||||||||||||||||| |||||| ||||||||||||||||| |||||     
T  48361684 cgaactgggtcaacaaattcttttgtgttctctcttctcttcttttctctcgttgttttctacttttgacttgtgattataattgttccatacactttg- 48361586  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    |||||||||| |||||||   ||| |||| |||| |||||||||||||    
T  48361585 ttttggttgcttgattattcattgttccatacattaagtttgttattg 48361538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 5522592 - 5522466
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  | ||| |||||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  5522592 tctcgccgttgttttctacttttggcttgtatttataacttt--cttacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgtt 5522496  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||| |||||||||||||    
T  5522495 attggtgtga-ttttcaacgaattcgcaaca 5522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 11170670 - 11170788
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  ||| |||||||| |||||||||||||||| |||||||| ||| |||||||||||||| ||||||||  | |    
T  11170670 ttgttttctacttttggcttgtattta--attattccatacactttgattttggttgcttgattatcccttactccacacatcaag-ttgttattaatgt 11170766  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    || ||||||||||||||||||||    
T  11170767 ga-ttttcatcgaattcgcaaca 11170788  T

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Target: chr3; HSP #69
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 31151590 - 31151754
Alignment:
Q  3 gaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||| ||||||||||  ||||||||||||||  ||||||||||||||  |||||||| ||  ||||||||||||| |  ||||||| ||||| ||    
T  31151590 gaactgggtaaacaaattctcatgtgttctctcttct-tttctctcgctgtt--tttctactctta-cttgtgtttataact--tccatacactttg-tt 31151682  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||  ||||||||||||||||||| | |||||||| |||||||||||||||||| |||||    
T  31151683 ttggttgcttgattattacttgctccacacatcaagtat-ttattggtgtgatttttcatcgaattcacaaca 31151754  T

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Target: chr3; HSP #70
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 39715711 - 39715883
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-gatt 100  Q
    |||| |||||||||||||||  |||||||||||| |||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||   ||    
T  39715711 aactaggtcaacaaattcttttgtgttctctctttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttatttt 39715809  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    || ||| |  || |||| ||| ||  ||||||||||||||||||||||  | |||| ||||||||||| |||||    
T  39715810 tttgttactagactatcccttactgtacacatcaagtttgttattggtgcggttttctcatcgaattcacaaca 39715883  T

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Target: chr3; HSP #71
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23633696 - 23633862
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| ||||| |||||||||||  |||||||||||| | ||||||||| ||||   |||||||| ||||||||||||||||   |||||||| |||||     
T  23633696 ccgaaatgggtaaacaaattcttttgtgttctctctttc-tttctctcgatgtt---ttctacttgtggcttgtgtttataa--attccatacactttg- 23633788  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||| || |||||| |||||||| ||| | |||||||| |||||||||||||||||| |||||    
T  23633789 ttttggttgcttgattttcacttgcttcacacatctagtat-ttattggtgtgatttttcatcgaattcacaaca 23633862  T

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Target: chr3; HSP #72
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 17795523 - 17795670
Alignment:
Q  20 tcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctc 119  Q
    |||||||||||||||| | |||||||||   ||||||||||||||||  ||||| |||||| |  |||||||  ||| ||||||||||| ||| ||||      
T  17795523 tcttgtgttctctctttcttttctctcg---ttgttttctacttttgt-ttgtgattataact--tccatacatttt-attttggttgcttgactatcag 17795615  T
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||    
T  17795616 ttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaacag 17795670  T

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Target: chr3; HSP #73
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 19103963 - 19104110
Alignment:
Q  20 tcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctc 119  Q
    |||||||||||||||| | |||||||||   ||||||||||||||||  ||||| |||||| |  |||||||  ||| ||||||||||| ||| ||||      
T  19103963 tcttgtgttctctctttcttttctctcg---ttgttttctacttttgt-ttgtgattataact--tccatacatttt-attttggttgcttgactatcag 19104055  T
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||    
T  19104056 ttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaacag 19104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 53591477 - 53591597
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||| |||||| ||| ||||||||||||||||||||  |||| |||||||||| |||||||| |||| |||||||||||| |||||||||| | ||    
T  53591477 tgttttctgcttttgacttatgtttataattgttccatacattttg-ttttggttgcttgattatcccttgttccacacatcaaatttgttattgatgtg 53591575  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||| |||| |||||| |||||    
T  53591576 ttttctcattgaattcacaaca 53591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 53894009 - 53893900
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||| ||| | ||||| |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  53894009 ttttctacttttggctt-tgtatttaattattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 53893913  T
Q  154 ttttcatcgaatt 166  Q
    |||  ||||||||    
T  53893912 tttcgatcgaatt 53893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 28412995 - 28412870
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |  ||||| |||   |||||||| | |||||||| |||||||||||||||||| |||||    
T  28412995 tctcgccgttgttttctacttttgacttgtatttataacttt--catacacttg--ttttggttacttgattatcccttgctccacacatcaag-ttgtt 28412901  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| || ||||||||||||||| |||||    
T  28412900 attggtgtgttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30006084 - 30006151
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttg 66  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||    
T  30006084 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttg 30006151  T

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Target: chr3; HSP #78
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 3859802 - 3859930
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||| | | |||| |||  ||||||||||||| |||||    
T  3859802 tctcgccgttgttttctacttttggcttgtattt-taattgtttcatacactttg-ttttggttgcttaactatcccttattccacacatcaag-ttgtt 3859898  T
Q  143 attggtatgatttttc-atcgaattcgcaaca 173  Q
    |||||| ||| ||||| ||||||||| |||||    
T  3859899 attggtgtgacttttcgatcgaattcacaaca 3859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42992629 - 42992799
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct-tccctttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||| |||||||| |||  ||||| ||| ||||| |||||  ||||||||| |||||| | | | ||||||| |  ||||||| |||||     
T  42992629 ccgaactgagtcaaaaaattcttttgtattctctctccttttcttctcgccattgttttctgcttttgacatatatttataact--tccatacactttg- 42992725  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||| || ||| |||||||||||||| |||||    
T  42992726 ttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtga-ttttcatcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 26720850 - 26720928
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaa 135  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||    
T  26720850 ttttctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 4103861 - 4103736
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||| |||||||| | ||| ||||||| |  ||||||| ||||  ||| |||||  ||| |||| |||||||||| |||||||||||||    
T  4103861 tctcgccgttgttttttacttttgacatgtatttataact--tccatacactttt-tttcggttgtttgactatc-cttgctccacgcatcaagtttgtt 4103766  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  4103765 attggtgtga-ttttcatcgaattcgcaaca 4103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42992513 - 42992594
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctgttgttttctacttttggcttgtgtttataa 80  Q
    |||||||||||||||||||| ||  ||||||||||| || ||||| ||||| ||||||||||||||||||||||| |||||||    
T  42992513 ccgaactgggtcaacaaatttttttgtgttctctct-ccttttcttctcgccgttgttttctacttttggcttgtatttataa 42992594  T

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Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 561739 - 561640
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| ||||||||||||| |  ||||||| |||||  ||||||||| |||||||  ||| ||||||||||||||| | |||||||| ||    
T  561739 tgttttctacttttg-cttgtgtttataact--tccatacactttg--tttggttgcttgattattacttactccacacatcaagtattttattggtgtg 561645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 35919085 - 35919018
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgc 123  Q
    ||||||||||||||||| | ||||  |||||||||||| ||||||||||||||| ||||||||| |||||    
T  35919085 ttttctacttttggcttctattta--attgttccatacactttgattttggttgtctgattatcccttgc 35919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8183148 - 8183035
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||||||  ||||||||||||   ||||||| || |||   ||||||||||| |||||||||||||||||||||||| | || |    
T  8183148 ccgaattgggtcaacaaattcttttgtgttctctctttt-tttctcttgcagtt---ttctacttttgacttgtgtttataattgttccatacacctt-a 8183054  T
Q  99 ttttggttgcctgattatc 117  Q
    |||||||||| ||| ||||    
T  8183053 ttttggttgcttgactatc 8183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 36957651 - 36957713
Alignment:
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||| |||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaag-ttgttattgatatga-ttttcatcgaattc 36957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 53597504 - 53597644
Alignment:
Q  23 tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttg 122  Q
    ||||||||||| |  ||||||||||   |||||||||| ||||| ||||||||||||||| ||||   | | ||||| |||||||| ||||||| |  ||    
T  53597504 tgtgttctctcctttctttctctcg---ttgttttctatttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt--tg 53597594  T
Q  123 ctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||| | |||||||| ||| |||||||||||||| |||||    
T  53597595 ctccacacataaagtattttattggtgtga-ttttcatcgaattcacaaca 53597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 25634177 - 25634294
Alignment:
Q  49 tgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    |||||||||||||||||| |||||||||||||||||| |  ||   ||| | |||||||| |||||||  |||||||| ||||| |||| | ||||||||    
T  25634177 tgttgttttctacttttg-cttgtgtttataattgttacccac---ttg-tattggttgcttgattattacttgctccccacattaagtat-ttattggt 25634270  T
Q  149 atgatttttcatcgaattcgcaaca 173  Q
     ||| |||||||||||||| |||||    
T  25634271 gtga-ttttcatcgaattcacaaca 25634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1674208 - 1674292
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc 87  Q
    ||||||||||| |||||||| | ||| ||||||||| | ||||||||| ||||   ||||| ||||  ||||||||||||||||||||    
T  1674208 ccgaactgggtaaacaaattttgtgtattctctctttcttttctctcgatgtt---ttctaattttttcttgtgtttataattgttcc 1674292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10612794 - 10612761
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctct 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  10612794 ccgaactgggtaaacaaattcttgtgttctctct 10612761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 25635672 - 25635788
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||||||||||| |||| |  ||   ||| | |||||||| |||||||  ||||||||||||||||||| | ||||| ||     
T  25635672 gttgttttctacttttg-cttgtgtttataactgttacccac---ttg-tattggttgcttgattattacttgctccacacatcaagtat-ttattagtg 25635765  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||| |||||||||||||| |||||    
T  25635766 tga-ttttcatcgaattcacaaca 25635788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 29897580 - 29897527
Alignment:
Q  121 tgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||| || |||| ||| ||||||| |||||    
T  29897580 tgctccacacatcaagtttgttattggtgtggttttctcaacgaattcacaaca 29897527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35917937 - 35917873
Alignment:
Q  112 attatctcttgctccacacatcaagtttgttattggtatgattttt-catcgaattcgcaacagaa 176  Q
    |||||| |||| |||| |||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  35917937 attatcccttgttccatacatcaagtt-gttattggtgtaattttttcatcgaattcgcaacagaa 35917873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 80133 - 80305
Alignment:
Q  3 gaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  80133 gaactgggtcaacaaattcttttgtgatctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgatt 80232  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    || |||||||||||||  |||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  80233 ttcgttgcctgattattacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 80305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 9e-62; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 79460 - 79631
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||||||||||| ||  |||||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  79460 aactgggtcaacaaattattttgtgttctctcttctttttctcttgctgttgttttctacttttggcttgtgattataattgttccatacactttgattt 79559  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  79560 tggttgcctaattatcccttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaaca 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43623596 - 43623423
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |    
T  43623596 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttatgattataattgttccatacactttaa 43623498  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43623497 ttttggttgcctgattatctattgctccacacatcaagttagttattggtgtgatttttcatcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 21520709 - 21520534
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||  ||||||||||||||  |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  21520709 ccgaactttgtcaacaaattcttttgtgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttta 21520610  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  21520609 attttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 21520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6258833 - 6258668
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||| || |||||     
T  6258833 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttagcttgtgtttataattgttccagacactttg- 6258737  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  6258736 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtatgttttctcatcgaattc 6258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 17849360 - 17849529
Alignment:
Q  5 actgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    |||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  17849360 actgggtcaacaaattcttttgtgttctctcttcc-tttctctccc-gttgttttctacttttggcttgtgtttaaaattgttccatacactttg-tttt 17849456  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  17849457 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaacag 17849529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 42923525 - 42923346
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| || ||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  42923525 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttg 42923427  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaact 178  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||  || ||||||| ||||| ||||    
T  42923426 tttttggttgcttgattatctcttgctccacacatcaagtttgttattggtgtgttttcacaacgaattcacaacaaaact 42923346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19007879 - 19008052
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  ||||||||| |||  |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||     
T  19007879 ccgaactaggtcaacaaattcttttgtgttctctattca-tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg- 19007975  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  19007976 ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaacag 19008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3022411 - 3022582
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||||||||||||||| |||||     
T  3022411 ccgaactgggtcaacaaattcttttgtgttctctcttcctttt-tctctc-gttgttttctgcttttggcttgtgtttataattgttccatacactttg- 3022507  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| || |||| | ||| ||||||| |||||    
T  3022508 ttttggttgcttgattatcacttgctccacacatcaagtttgttatttgtgtgatctctcaccgaattcacaaca 3022582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 6264164 - 6263993
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||||||| |||||||||| ||||||||||||||| |||||     
T  6264164 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctactttcggcttgtgttaataattgttccatacactttg- 6264068  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| || || ||| ||||||||||| |||||    
T  6264067 ttttggttgcctgatagtcacttgctccacacatcaagtttgttattagtgtgttttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 7462940 - 7462789
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||| ||||||||  ||    
T  7462940 ttgtgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgattatccttt 7462842  T
Q  122 gctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||| | | || |||| ||| |||||||||||||    
T  7462841 gctccacacatcaagtttgttatcgatgtggttttctcaacgaattcgcaaca 7462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28196874 - 28197045
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | |||||||||||||||||||||||||||||||||| ||||| |||||     
T  28196874 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtgtttataattgtttcatacactttg- 28196970  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||  || |||| ||||||||||||||||| |||||||||||| ||||||||||||||| || |||||    
T  28196971 ttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtgatttttcatcgaactcacaaca 28197045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 14837507 - 14837680
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||| |||||||| | | |||||| |||||||||||||||||||||||||||| |||| |||||     
T  14837507 ccgaactgagtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttatacttttggcttgtgtttataattgttctatacactttg- 14837603  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagt-ttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||| | |||||| ||||||||||| ||||||    
T  14837604 ttttggttgcttgattatcacttgctccacacatcaagtattgttattgatgtgatttctcatcgaattcacaacag 14837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22287352 - 22287181
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | |||||||||| |||| ||||| |||||||||||||||||| || ||     
T  22287352 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacgtttgacttgtttttataattgttccatacactatg- 22287256  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  22287255 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 22163037 - 22162868
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||| |||||| ||||||||||  |||| |    
T  22163037 cgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgcttataactgttccatacaatttg-t 22162943  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||||| |||||||| |||||| ||||||||||  ||||||||||| || ||| ||||||||||||||||||    
T  22162942 tttggttgcttgattatcccttgcttcacacatcaaaattgttattggtgtgttttctcatcgaattcgcaacag 22162868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 27105085 - 27105209
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||  ||||  |||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  27105085 tctcgccgttgttttctacttttggcttgcattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgtt 27105181  T
Q  143 attggtatgatttttcatcgaattcgca 170  Q
    |||||| |||||||||||||||||||||    
T  27105182 attggtgtgatttttcatcgaattcgca 27105209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15539545 - 15539400
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||| |||| |||||     
T  15539545 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctactttttgcttgtgtttataattgttcaatacactttg- 15539449  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    ||||| |||| |||| ||| ||||||||||||||||||||||||||||||    
T  15539448 ttttgattgcttgataatc-cttgctccacacatcaagtttgttattggt 15539400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 45279968 - 45279844
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  45279968 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtt 45279873  T
Q  143 attggtatgatttttcatcgaattcgcaa 171  Q
    |||||| |||||| |||||||||||||||    
T  45279872 attggtgtgatttctcatcgaattcgcaa 45279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 22707765 - 22707595
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||| |||||||||||||||  |||||||||||||| |||||||| | | |||||||||||| || |||||||||||||||||||||||| ||||| ||    
T  22707765 gaactaggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttctgccttgtgtttataattgttccatacactttg-tt 22707669  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||| ||||| |  ||| ||||||||||||| |||||||||||| || |||| |||||||||||||||||    
T  22707668 ttggttgcttgattgttccttactccacacatcaaatttgttattggtgtggttttctcatcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 28459157 - 28459037
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||| | |||||||| ||    
T  28459157 tgttttctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtgttttattggtgtg 28459059  T
Q  152 atttttcatcgaattcgcaacag 174  Q
    | |||||||||||||| ||||||    
T  28459058 a-ttttcatcgaattcacaacag 28459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 23452204 - 23452084
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  23452204 tctcgccgttgttttctacttttagcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 23452108  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    |||||| ||| ||||||||||||||    
T  23452107 attggtgtga-ttttcatcgaattc 23452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22407470 - 22407346
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||     
T  22407470 ccgaacttggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gatgttttctacttttggcttgtgtttataattgttccatacactttg- 22407374  T
Q  99 ttttggttgcctgattatctcttgctcc 126  Q
    |||||||||| ||| |||||||||||||    
T  22407373 ttttggttgcttgactatctcttgctcc 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 45238990 - 45238837
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc-atacgctttgattttggttgcctgattatctct 120  Q
    |||||||||||||||  ||||||||||||||   |||||||||||||||||| |||||| ||||   || | ||| |||||||||||| ||| |||| ||    
T  45238990 ttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgct 45238895  T
Q  121 tgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacagaact 178  Q
    || |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  45238894 tggtccacacatcaagtttattattggtgtgatttttcatcgaattcgcaacaaaact 45238837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5375362 - 5375218
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  || ||||| |||||| ||||  ||||||| ||||| |||||||||||||||||| |||||    
T  5375362 ccgaactgggtcaacaaattcttttgtgttctctcttcttttctctcttgctgttttttt--acttttgacttgtatttataattgttccatacactttg 5375265  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttatt 145  Q
     ||||| |||| |||||||| ||| |||||||||||||||||||||||    
T  5375264 -ttttgattgcttgattatcccttactccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 17848681 - 17848814
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||   |||||||||| | ||| ||||||||||||| ||||| ||  ||||    
T  17848681 gaactgggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctactttttgtttgcgtttataattgtttcatacactgcgatt 17848776  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  17848777 ttggttgcttgattatcacttgctccacacatcaagtt 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||     
T  19501958 ttttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 19501863  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  19501862 ttttcatcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 36558848 - 36558721
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| |||| || ||||  |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| || |    
T  36558848 tctcgcagttgttttctactttttggctcgtattta--attgttccatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttat 36558753  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  36558752 tattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 36561108 - 36560981
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| |||| || ||||  |||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||| ||    
T  36561108 tctcgcagttgttttctactttttggctcgtattta--attgttccatacgctttg-ttttggttgcttgattattccttgctccacacatcaagtt-gt 36561013  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  36561012 tattggtgtgatttttcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 38020370 - 38020484
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||| |||||||  ||||||||| ||||||| |||||||||||| ||    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtg 38020468  T
Q  152 atttttcatcgaattc 167  Q
    ||||| |||| |||||    
T  38020469 attttacatcaaattc 38020484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40032069 - 40031979
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccata 90  Q
    ||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  40032069 ccgaactgggtcaacaaattcttttgtattctctcttccttttctctcgctgttgttttctacattt-gcttgtgtttataattgttccata 40031979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 34979554 - 34979440
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||| | |||||  ||| |||||||||||||||||||||||||| ||    
T  34979554 tgttttctacttttgacttatgtttataattgttccatacacttt-attttggttgctttattattccttactccacacatcaagtttgttattggtgtg 34979456  T
Q  152 atttttcatcgaattc 167  Q
     ||| |||| ||||||    
T  34979455 ttttctcattgaattc 34979440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 35217936 - 35217826
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||    
T  35217936 tctcgccgttgttttctacttttgacttgtattta--attattccatacgctttg-ttttggttgcttaattatctcttgctccacacatcaag-ttgtt 35217841  T
Q  143 attggtatgattttt 157  Q
    |||||| ||||||||    
T  35217840 attggtgtgattttt 35217826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  56 ttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattt 155  Q
    ||||||||||||||||| ||||||| |  ||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||    
T  19504291 ttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tt 19504196  T
Q  156 ttcatcgaattcgcaaca 173  Q
    |||||||||||| |||||    
T  19504195 ttcatcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 24162190 - 24162062
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||||  |||||||||| |||||||||||| |||||||||||||| |||||    
T  24162190 tctcgccgttgttttctacttttggcttgtattta--attgtttcatacactttt-ttttggttgcttgattatctctttctccacacatcaag-ttgtt 24162095  T
Q  143 attggtatgat-ttttcatcgaattcgcaacag 174  Q
    |||||| |||| ||||||||| |||| ||||||    
T  24162094 attggtgtgatattttcatcgtattcacaacag 24162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 45332147 - 45332020
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  |||||| || |||||||| |||||||||| | |||||| |||| ||||||||||||||| ||    
T  45332147 tctcgccgttgttttctactttttggcttgtattta--attgttacaaacgctttg-ttttggttgcttaattatcccttgttccacacatcaagtt-gt 45332052  T
Q  142 tattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| |||||||||||||||||| |||||    
T  45332051 tattggtgtgatttttcatcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 13910012 - 13909902
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  13910012 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgtt 13909917  T
Q  143 attggtatgattttt 157  Q
    |||||| ||| ||||    
T  13909916 attggtgtgactttt 13909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 38414149 - 38414028
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||||| |||| ||||||| |||||| | ||||||||||| ||| |||||| |||||     
T  38414149 gttgttttctacttttaccttgtgtttataattattccatacactttg-ttttcgttgcctaattatcacgtgctccacacaccaattttgtt-ttggtg 38414052  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||| |||||| |||||    
T  38414051 tgatttttcatggaattcacaaca 38414028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 11739532 - 11739421
Alignment:
Q  61 cttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcat 160  Q
    |||||| ||||| |||||||||||| ||||| ||||| ||||  || | ||| |||| ||||||| |||||||||||||||||||||| |||||||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttattt-cttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcat 11739434  T
Q  161 cgaattcgcaaca 173  Q
    ||||||| |||||    
T  11739433 cgaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 42453798 - 42453890
Alignment:
Q  78 taattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  42453798 taattgttccatacatttt-attttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 22874431 - 22874519
Alignment:
Q  84 ttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||||| |||| ||||| ||| |||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  22874431 ttccatacactttg-ttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 35215559 - 35215449
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| || |||| |||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  35215559 tctcgccgttgttttctacttttgacttgtattta--attatttcatatgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgtt 35215464  T
Q  143 attggtatgattttt 157  Q
    |||||| ||||||||    
T  35215463 attggtgtgattttt 35215449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 44289083 - 44288987
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||| |||||||||||||||||||||| ||||| |||||    
T  44289083 ccgaactgggtcaacaaattcttttgtgttctctcttca-tttctctctc-gctgttttctactgttggcttgtgtttataattgtttcatacactttg 44288987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11578123 - 11577957
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||| ||| |||||||| | |||||| ||||||  ||||||||||   ||||||||||||||||||||||||||| |    |||||||  |||| ||    
T  11578123 ccgaactaggtaaacaaatttcgtgtgttttctcttttctttctctcg---ttgttttctacttttggcttgtgtttaaa---cttccatatacttt-at 11578031  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||  |||| |||||||||||||||| |||||  | ||| ||||||||||||||| |||||    
T  11578030 tttggttgcttgattattacttgttccacacatcaagttt-ttattaatgtgattttttcatcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20146623 - 20146459
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| ||| |||| | |||| |||||||| | |||||||||   |||||||||||||||| ||||||||||||||||||||   |   |||||    
T  20146623 ccgaactgggtaaacgaatttcgtgtgatctctctttcttttctctcg---ttgttttctacttttg-cttgtgtttataattgttcc---catgttgat 20146531  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     |||||||| |||||| || || || |||||||||||| | |||||||| |||||||||| ||||||| |||||    
T  20146530 attggttgcttgatta-ct-ttacttcacacatcaagtattttattggtgtgatttttcaacgaattcacaaca 20146459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 23871058 - 23871230
Alignment:
Q  4 aactgggtcaacaaattcttgtg--ttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattg--ttccatacgctttgat 99  Q
    |||| ||||||||||||||| ||  ||||||||||  |||||||| | | ||||||||||||||| ||||||||||||||||  || ||||| ||||| |    
T  23871058 aactaggtcaacaaattcttttgagttctctcttca-tttctctccc-gctgttttctacttttgccttgtgtttataattgtttttcatacactttg-t 23871154  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtat-gatttttcatcgaattcgcaacag 174  Q
    |||||||   | ||| |  ||||||||||||||||| |||||||||||| | | ||| |||||||||| |||||||    
T  23871155 tttggttatttaattgttccttgctccacacatcaaatttgttattggtgtagttttctcatcgaatttgcaacag 23871230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 42064793 - 42064878
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtt 138  Q
    |||||||||||||||| |||||| ||||  |||||||||||| ||||| |||| ||||| |||| ||| ||||||||||||||||||||    
T  42064793 gttgttttctactttttgcttgtattta--attgttccatacactttg-ttttagttgcttgatcatcccttgctccacacatcaagtt 42064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 20592368 - 20592484
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||| |||||| |||||| |  ||||||| ||||| |||||||||| |||||||  ||||||| |||||||| || | |||||||| ||||    
T  20592368 ttttctacttttg-cttgtgattataact--tccatacactttg-ttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgat 20592463  T
Q  154 ttt-tcatcgaattcgcaaca 173  Q
    ||| ||||||||||| |||||    
T  20592464 tttttcatcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 37962852 - 37962791
Alignment:
Q  112 attatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||| |||||| | |||||||||||||||||| |||||    
T  37962852 attatcacttactccacacatcaagtttattattgatgtgatttttcatcgaattcacaaca 37962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17897261 - 17897125
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | |||||||||   ||||||||||||||| |||||||||||||| |||  |||   ||||| |    
T  17897261 ccgaactgggtaaacaaatttcgtgtgttctctctttc-tttctctcg---ttgttttctactttt-gcttgtgtttataactgt--catcaactttg-t 17897170  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    ||||||||| ||||||  | |||||||||||||||||| | ||||||    
T  17897169 tttggttgcttgatta--ttttgctccacacatcaagtattttattg 17897125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31732792 - 31732666
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||| |||||| ||||||||| |||||||||| |  | ||||||||||||||   |||||||||||| ||||| ||||||   |||||||| || || ||    
T  31732792 ccgagctgggtaaacaaattcgtgtgttctctat--cttttctctcgctgtt---ttctacttttggtttgtgattataa--cttccatacactctg-tt 31732701  T
Q  101 ttggttgcctgattatctcttgctccacacatcaa 135  Q
    |||||||| |||||||  |||||| ||||||||||    
T  31732700 ttggttgcttgattataacttgcttcacacatcaa 31732666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40699615 - 40699697
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttc 86  Q
    ||||||| ||| |||||||| | ||||||||||||| | ||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  40699615 ccgaactaggtaaacaaatttcgtgtgttctctctttc-tttctctcgctatt--tttctacttttg-cttgtgtttataattgttc 40699697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 42923347 - 42923293
Alignment:
Q  119 cttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||||||||||||||||||||||| || |||  || ||||||| |||||    
T  42923347 cttgctccacacatcaagtttgttattggtgtgttttcacaacgaattcacaaca 42923293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22800878 - 22800704
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||     
T  22800878 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttg- 22800780  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
    |||||||||| ||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  22800779 ttttggttgcttgactatcccttgctccccacatcaagtttgttattggtgtgatttttcatcgaattcgcaacag 22800704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22802750 - 22802577
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  ||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||     
T  22802750 ccgaactaggtcaacaaattcttttgtgttctatcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttg- 22802652  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22802651 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14789444 - 14789273
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| |    
T  14789444 ccgaactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-t 14789347  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14789346 tttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 36919600 - 36919432
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | | ||||||||||||||| |||||||||||||||||||||||| |||| |    
T  36919600 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacacttt-a 36919504  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgca 170  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36919503 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgca 36919432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 52942504 - 52942329
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||| ||||||||||||||  |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52942504 ccgaactgagtcaacaaattcttttgtgttctctcttcttttcctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttga 52942405  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||| || ||| |||||||||||||| ||||||    
T  52942404 ttttgattgcctgattatctcttactccacacatcaaatttgttatttgtgtgattttttcatcgaatttgcaaca 52942329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 36921509 - 36921338
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||  || |||||||||||||||||||||||||||||||||| ||||| |||| |    
T  36921509 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctct-tgctgttttctacttttggcttgtgtttataattgtttcatacacttt-a 36921413  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36921412 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 14787442 - 14787274
Alignment:
Q  4 aactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  14787442 aactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 14787345  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14787344 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2891609 - 2891780
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |    
T  2891609 ccgaactgggtcaacaaattcttttgtgttctctcttcc-tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt-a 2891705  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||   ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2891706 ttttggttgcttgattattctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 38928193 - 38928024
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  |||||||||||||| | ||| ||||   |||||||||||||||||||||||| |||||| |||||||||| |||||     
T  38928193 ccgaactgggtcaacaaattcttttgtgttctctctt-cttttatctc---gttgttttctacttttggcttgtgattataactgttccatacactttg- 38928099  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38928098 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 40637391 - 40637567
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg- 97  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  40637391 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgt 40637490  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaacag 174  Q
     |||||||||| |||||||  |||||||||||||||||| ||||||||||| |||| || ||| ||||||||||||||    
T  40637491 tttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatattctcaacgaattcgcaacag 40637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33415504 - 33415334
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||| ||||||||  |||||||||||||  ||||||||||||||   ||||||||||||||||||||||||||||| |||||| ||||||    
T  33415504 ccgaactgggtcaataaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttggcttgtgtttataattgtcccatacactttga 33415409  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||    
T  33415408 ttttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtgatttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24889113 - 24889286
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  24889113 ccgaactgggtcaacaaattcttttgtgttatctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg- 24889211  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaaca 173  Q
    |||||||||   ||||||  |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  24889212 ttttggttgttagattattccttgctccacacatcaag-ttgttattggtgtgatattttcatcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 40091431 - 40091259
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||  || | ||||||||||||||||||||||||||||| |||||||| |||| |    
T  40091431 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctct-tgctattttctacttttggcttgtgtttataattattccatacacttt-a 40091335  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg-atttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  40091334 ttttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaatttttcatcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 17662261 - 17662091
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||     
T  17662261 ccgaactgggtcaacaaattcttttgtgttctctcttc--tttttctcgctgttgttttctacttttggcatgtgattataattgttccatacactttg- 17662165  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacag 174  Q
     |||| |||| |||||||| |||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  17662164 gtttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcaacgaattcgcaacag 17662091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24879307 - 24879474
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  24879307 ccgaactgggtcaacaaattctcttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg- 24879405  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtat-gatttttcatcgaattcgcaacagaa 176  Q
    |||||||||| |||||||           ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  24879406 ttttggttgcttgattat----------tcacatcaagtttgttattggtgtggttttttcatcgaattcacaacagaa 24879474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 49088922 - 49089044
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| ||| ||| ||||||||||||||||||||||     
T  49088922 gttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttactcaacacatcaagtttgttattggtg 49089020  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  49089021 tgatttttcatcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24446670 - 24446502
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||    |||||||||||||||||||||||||||||||| |||||||| |||| |    
T  24446670 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctc----ttgttttctacttttggcttgtgtttataatttttccatacacttt-a 24446577  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||| || ||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  24446576 ttttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47563078 - 47563248
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||||||||||   ||||||||||||||| |||||||||||||||||||| |||||     
T  47563078 ccgaacttggtcaacaaattcttttgtgttctctcttcc-tttctctcgctgtt---ttctacttttggcttatgtttataattgttccatacactttg- 47563172  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcgcaaca 173  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||| || |||| ||||| ||||| |||||    
T  47563173 ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttctcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 16453676 - 16453796
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||||||||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  16453676 tgttttctacttttggcttgtgattataactgtttcatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 16453774  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||||||||| |||||    
T  16453775 atttttcatcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 27499362 - 27499530
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctt---tctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||||||||||||||  |||||||||||||| ||   |||||| || ||||||||||||||||| |||||||||||||||||||||||  |||||    
T  27499362 aactgggtcaacaaattcttttgtgttctctcttcctttctctctctctctcgttgttttctacttttgacttgtgtttataattgttccataaactttg 27499461  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
     |||||||||| || ||||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27499462 -ttttggttgcttggttattcattgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 27499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 37089339 - 37089211
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  37089339 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtttgtt 37089243  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||||||||||||||||||||||    
T  37089242 attggtgtgatttttcatcgaattcgcaacag 37089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 47868774 - 47868894
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| |||   |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||     
T  47868774 gttgttttctacttttggcttgtatttt--attgttccatacactttgattttggttgcctgattatcccttgctccacacatcaag-ttgttattggtg 47868870  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||||    
T  47868871 tgatttttcatcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 48486638 - 48486803
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||||||||||| ||  ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||| ||    
T  48486638 gaactgggtcaacaaattattttgtgttttctcttccttttctcttgatgttgttttctacttttggcttgtgtttataattgttccattcactttg-tt 48486736  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    || ||||| |||||||| |||| ||||| |||||| |||||||||||| || ||| |||||||||||    
T  48486737 ttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgtgttttctcatcgaattc 48486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 3824626 - 3824446
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttct-ctcgctgttgtttt-ctactttt-ggcttgtgtttataattgttccatacgctt 95  Q
    |||||||||||||||||||||||  ||||||||| |||  ||||| || |||| |||||| |||||||| ||||||||||||||| ||||||||||  ||    
T  3824626 ccgaactgggtcaacaaattcttttgtgttctctattctttttcttcttgctgctgtttttctactttttggcttgtgtttataactgttccatacattt 3824527  T
Q  96 tgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt--tcatcgaattcgcaacag 174  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||  ||||||||||| ||||||    
T  3824526 tgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttctcatcgaattcacaacag 3824446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24880769 - 24880938
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg- 97  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||     
T  24880769 ccgaactgggtcaacaaattctcttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgt 24880868  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtat-gatttttcatcgaattcgcaacagaa 176  Q
     |||||||||| |||||||           ||||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  24880869 gttttggttgcttgattat----------tcacatcaagtttgttattggtgtggttttttcatcgaattcacaacagaa 24880938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11437679 - 11437855
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccct---ttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||| |   |||| ||||| ||||||||||||||||||||||| ||||  |||||||||||| |    
T  11437679 ccgaactgggtcaacaaattcttttgtgttcttctcttccttgtgttcttctcgccgttgttttctacttttggcttgtattta--attgttccatacac 11437776  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||||| ||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
T  11437777 tttgtttttggctgcttgattatctcttgctccatacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 13547494 - 13547635
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||    
T  13547494 ttgtgttctctcttcc-tttctctctc-gatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcactt 13547591  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaat 165  Q
    | ||||||||||||||||||||||||| || ||| |||| ||||    
T  13547592 gttccacacatcaagtttgttattggtgtgttttctcattgaat 13547635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11435271 - 11435438
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccct---ttct-ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||| |   |||| |||||  |||||||||||||||||||||| ||||  |||||||||||| |    
T  11435271 ccgaactgggtcaacaaattcttttgtgttcttctcttccttgtgttcttctcgccattgttttctacttttggcttgtattta--attgttccatacac 11435368  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  11435369 tttgtttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttttcatcgaa 11435438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 16455594 - 16455715
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||| |||| |||| || |||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  16455594 tgttttctagttttagcttatgattataactgttccatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 16455692  T
Q  152 atttttcatcgaattcgcaacag 174  Q
    |||||||||||||||| ||||||    
T  16455693 atttttcatcgaattcacaacag 16455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12395861 - 12395692
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||| ||||||||||| ||||  |||||||||||||| ||||| || | ||||| ||||||||||||| ||||||||||||| ||| |||| |||||     
T  12395861 ccgaacagggtcaacaaactcttttgtgttctctcttcc-tttctgtctc-gttgtcttctacttttggcatgtgtttataatttttcgatactctttg- 12395765  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||| ||||| ||||    
T  12395764 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcattgaatttgcaa 12395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12400823 - 12400654
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||| ||||||||||| ||||  |||||||||||||| ||||| || | ||||| ||||||||||||| ||||||||||||| ||| |||| |||||     
T  12400823 ccgaacagggtcaacaaactcttttgtgttctctcttcc-tttctgtctc-gttgtcttctacttttggcatgtgtttataatttttcgatactctttg- 12400727  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||| ||||| ||||    
T  12400726 ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcattgaatttgcaa 12400654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 6133155 - 6133326
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||| |||||||||||||||||  |||||||||||||  |||||||| | ||||||||||||||||| |||||||||||||||||| ||||| ||||| |    
T  6133155 cgaattgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gttgttttctacttttgacttgtgtttataattgtttcatacactttg-t 6133251  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt--catcgaattcgcaac 172  Q
    || |||||| |||||||  |||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||    
T  6133252 ttcggttgcttgattattccttgctccacacatcaagtttgttattggtgtaattttttccatcgaattcacaac 6133326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 37313044 - 37312924
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||| |||||||| ||    
T  37313044 tgttttctacttttggcttatgattataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttattattggtgtg 37312946  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||||||    
T  37312945 atttttcatcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 22782704 - 22782577
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  22782704 tctcgccgttgttttctacttttggcttgtatttataacttt--catacgctttgtttttggttgcttaattatcccttgctccacacatcaag-ttgtt 22782608  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||| ||||||||||||||    
T  22782607 attggtgtgatttttcgtcgaattcgcaaca 22782577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 53405508 - 53405626
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    ||||||||||||||||||||| ||||||| |  |||||||  |||| |||||||||| |||||||| ||||||||||||||||||||| |||||||| ||    
T  53405508 tgttttctacttttggcttgtatttataact--tccatacattttg-ttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtg 53405604  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||    
T  53405605 atttttcatcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 5101284 - 5101404
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| |||| ||||||||||||||||||||||||| ||    
T  5101284 tgttttctccctttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgatccacacatcaagtttgttattggtgtg 5101382  T
Q  152 atttttcatcgaattcgcaaca 173  Q
     ||| ||||||||||| |||||    
T  5101383 ttttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 6765210 - 6765336
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||| ||||||| |||||||||   |||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||||||    
T  6765210 tctcgccgttgttttctacttt-ggcttgtatttataatt---ccatacactttg-ttttggttgcttgattatcccttactccacacatcaagtttgtt 6765304  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||||||||||||||| ||||||    
T  6765305 attggtgtgatttttcatcgaattcacaacag 6765336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 31849554 - 31849439
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||     
T  31849554 ttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga- 31849460  T
Q  154 ttttcatcgaattcgcaacag 174  Q
    |||||||||||||||||||||    
T  31849459 ttttcatcgaattcgcaacag 31849439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 2484840 - 2484714
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  2484840 tctcgccgttgttttctacttttggcttgtattta--attgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaag-ttgtt 2484745  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||| ||||||    
T  2484744 attggtgtga-ttttcatcgaattcacaacag 2484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 5635443 - 5635317
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||  |||||||| |||||||||||||||||| |||||    
T  5635443 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgattgattatcccttgctccacacatcaag-ttgtt 5635348  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||||||||||    
T  5635347 attggtgtga-ttttcatcgaattcgcaacag 5635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 9148608 - 9148727
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||     
T  9148608 gttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgttccacacatcaag-ttgttattggtg 9148703  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    || ||| |||||||||||||||||    
T  9148704 tgttttctcatcgaattcgcaaca 9148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 14633684 - 14633811
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| ||| |||||| ||||||||||||||||||||||||||| |||||    
T  14633684 tctcgccgttgttttctacttttggcttgtattta--attgttccatacattttg-tttcggttgcttgattatctcttgctccacacatcaag-ttgtt 14633779  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||| |||||||||||| |||||    
T  14633780 attggtgtgatttctcatcgaattcggaacag 14633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16931757 - 16931631
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||| | |||||| |||||||||||||| ||||| |||    
T  16931757 tctcgccgttgttttctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatcccttgctccacacattaagtt-gtt 16931662  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  16931661 attggtgtgatttttcatcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 22780339 - 22780212
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||| | ||||||| | |   |||||||||| |||||||||| | |||||| |||||||||||||||||| |||||    
T  22780339 tctcgccgttgttttctacttttggcttatatttataactttg--atacgctttgtttttggttgcttaattatcccttgctccacacatcaag-ttgtt 22780243  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  22780242 attggtgtgatttttcatcgaattcgcaaca 22780212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 44599805 - 44599680
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||||||||||| |||||||||| | |||||| |||||||||||||||||||| |||    
T  44599805 tctcgccgttgttttctacttttgccttgtattta--attattccatacgctttg-ttttggttgcttaattatc-cttgctccacacatcaagtt-gtt 44599711  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  44599710 attggtgtgatttttcatcgaattcgcaaca 44599680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 4215623 - 4215792
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||| |||  |||||| | |||||||||| |||   |||||||||||||||||| ||||||||||| ||||| ||||| ||    
T  4215623 ccgaactgggtcaacaaattcttttgtgttctctttcttttctctcgcagtt---ttctacttttggcttgtgattataattgtttcatacactttg-tt 4215718  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga--tttttcatcgaattcgcaaca 173  Q
    || ||||| |||||||  |||||| ||||||||||| |||||||| || |||  ||| |||||||||||||||||    
T  4215719 tttgttgcttgattattccttgcttcacacatcaag-ttgttatttgtgtgagttttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3937290 - 3937126
Alignment:
Q  1 ccgaactgggtcaacaaattc--ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||  |||||||||||||| | |||||||||   ||||||||||||||||  ||||| || ||  | |||||||| |||||     
T  3937290 ccgaactgggtcaacaaattcatttgtgttctctctttc-tttctctcg---ttgttttctacttttgt-ttgtgatttta--tcttccatacactttg- 3937199  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  3937198 -tttggttgcttgattatcccttgctcctcacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 24348567 - 24348692
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||||||||| ||||   ||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  24348567 tctcgccgttgttttctatttttggcttgtatttag--ttgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 24348662  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  24348663 attggtgtga-ttttcatcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 26085944 - 26085818
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||| |||||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  26085944 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgtt 26085848  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| || |||||||||||||||||    
T  26085847 attggtgtga-ttctcatcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 47210755 - 47210637
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||| |    
T  47210755 ttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgctttattatctcttgctccacacatcaag-ttgttattggtgt 47210660  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    |||||  || |||||||||||||    
T  47210659 gatttcacaacgaattcgcaaca 47210637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36378610 - 36378777
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||| |||||||| ||  |||||||||||||  ||||||   ||| |||||||||||||| | ||||||||||||||||| ||||| |||||     
T  36378610 ccgaactgggtaaacaaattattttgtgttctctcttct-tttctc---ctgctgttttctacttttcgtttgtgtttataattgtttcatacactttg- 36378704  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     ||||||||| |||||||  ||||||||||| ||||||| | |||||||| ||| ||||||||||||||||||||    
T  36378705 -tttggttgcttgattattacttgctccacatatcaagtattttattggtgtga-ttttcatcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 22046646 - 22046526
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||     
T  22046646 gttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 22046551  T
Q  150 tgatttttc-atcgaattcgcaaca 173  Q
    ||||||||| ||||||||| |||||    
T  22046550 tgatttttcgatcgaattcacaaca 22046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 8631374 - 8631260
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| |||| ||||| |||||||| |||||||||||||||||| ||||||||||| |||     
T  8631374 ttttctacttttggcttgtattta--attgttccatacactttg-ttttagttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 8631280  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  8631279 ttttcatcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 51015611 - 51015722
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  51015611 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 51015706  T
Q  143 attggtatgatttttc 158  Q
    |||||| || ||||||    
T  51015707 attggtgtgttttttc 51015722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22044407 - 22044230
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttct----ctcgctgttgttttctacttttggcttgtgtttataattgttccatacgc 93  Q
    |||||||||||||||||||||||  ||||||| ||||||  ||| |    ||||| ||||||||||||||||||||||| ||||  |||||| ||||| |    
T  22044407 ccgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgccgttgttttctacttttggcttgtattta--attgtttcatacac 22044310  T
Q  94 tttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttc-atcgaattcgcaacag 174  Q
    |||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||||| ||| ||||| ||||||    
T  22044309 tttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgttatttttcgatcaaattcacaacag 22044230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 56030828 - 56030945
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||  |||| ||||||| |  ||||||| ||||| |||||||||| ||| |||||||||||||||| ||||||||| |||||||| ||    
T  56030828 tgttttctacttttgt-ttgtatttataact--tccatacactttg-ttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtg 56030923  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||||    
T  56030924 atttttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 9176429 - 9176315
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||| |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||     
T  9176429 ttttctacttttggcttgtattta--attattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 9176335  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| ||||||||||||||    
T  9176334 ttttcgtcgaattcgcaaca 9176315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 47275042 - 47275185
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||| ||||||||||||||||  ||||||| |||||   ||||||||||||||   ||||||||||||||||||||||||||| ||| |||| |||      
T  47275042 ccgaaccgggtcaacaaattcttttgtgttcttctcttga-tttctctcgctgtt---ttctacttttggcttgtgtttataattattctatacacttc- 47275136  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||||||    
T  47275137 attttgattgcttgattatcccttactccacacatcaagtttgttattg 47275185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 18409309 - 18409192
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga- 152  Q
    ||||||||||||| |||||| |||||| |  ||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||| |||||||| |||     
T  18409309 ttttctacttttgtcttgtgattataact--tccatacactttg-ttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgat 18409213  T
Q  153 tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| |||||    
T  18409212 tttttcatcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 5198781 - 5198895
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  ||||||||||||||||| || |||||||| |||     
T  5198781 ttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaag-ttattattggtgtga- 5198875  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||||||||||||| |||||    
T  5198876 ttttcatcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 7941697 - 7941815
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||| ||||| |||   |||||||||||| ||||| |||||||||| | |||||| |||||||||||||||||| ||||| ||||| |    
T  7941697 ttgttttctacttttgccttgtatttc--attgttccatacactttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttgttggtgt 7941792  T
Q  151 gatttttcatcgaattcgcaacag 174  Q
    || |||||||||||||||||||||    
T  7941793 ga-ttttcatcgaattcgcaacag 7941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 9174101 - 9173987
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||| || ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||| || |||     
T  9174101 ttttctacttttggcttgtattta--attatttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattagtgtga- 9174007  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||||    
T  9174006 ttttcatcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 11006209 - 11006094
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| || |    
T  11006209 ttttctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 11006114  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||  ||||||||| |||||    
T  11006113 tttcgatcgaattcacaaca 11006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 11008523 - 11008408
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| || |    
T  11008523 ttttctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 11008428  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    |||  ||||||||| |||||    
T  11008427 tttcgatcgaattcacaaca 11008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 22132340 - 22132248
Alignment:
Q  59 tacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatt 154  Q
    |||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||    
T  22132340 tacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 38409570 - 38409696
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| |||| ||||| |||||||| |||||||||||||||||| |||||    
T  38409570 tctcgccgttgttttctacttttggcttgtattta--attgttccatacaatttg-ttttagttgcttgattatcccttgctccacacatcaag-ttgtt 38409665  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| || ||||  || |||||| |||||    
T  38409666 attggtgtgtttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 36380668 - 36380827
Alignment:
Q  2 cgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||||||| |||||||||||  |||||||||||||  ||||||   ||  |||||||||||||||||||||||||||||||||| ||||| |||||      
T  36380668 cgaactgggtaaacaaattcttttgtgttctctcttct-tttctc---cttctgttttctacttttggcttgtgtttataattgtttcatacactttg-- 36380761  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    |||| |||| |||| ||  ||| ||||||||||||| | | |||||||| ||| |||||||||||||    
T  36380762 tttgattgcttgatcattacttactccacacatcaaatattttattggtgtga-ttttcatcgaatt 36380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16934111 - 16933988
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||| ||||||||||||   |||||||||| | |||  | |||||||||||||| ||||| |||    
T  16934111 tctcgccgttgttttctacttttggcttgtattta--attattccatacgcttg--ttttggttgcttaatt--cccttgctccacacattaagtt-gtt 16934019  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  16934018 attggtgtgatttttcatcgaattcacaaca 16933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 18847518 - 18847628
Alignment:
Q  43 tctcgctgttgttttctactttt-ggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| ||||||| ||||  ||| |||||||| |||||  ||||||||| |||||||| |||||||||||||||||| ||||    
T  18847518 tctcgccgttgttttctactttttggcttgtattta--attattccatacactttg--tttggttgcttgattatcccttgctccacacatcaag-ttgt 18847612  T
Q  142 tattggtatgattttt 157  Q
    ||||||| ||||||||    
T  18847613 tattggtgtgattttt 18847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 5664576 - 5664722
Alignment:
Q  23 tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttg 122  Q
    ||||||||||||| | ||||||||| |  |||||||||||||||| ||||  ||||||   |||||||| ||||| |||||||||| |||||||  | |     
T  5664576 tgtgttctctctttcttttctctcgttaatgttttctacttttggtttgtcattataa--cttccatacactttg-ttttggttgcttgattattacctt 5664672  T
Q  123 ctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||||||||| | |||||||| ||| |||||||||||||| |||||    
T  5664673 ctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 38890240 - 38890090
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||||||||   ||||| ||||| ||||||||||||| |  ||||||| |||||      
T  38890240 ccgaactgggtaaacaaatttcgtgtgttctctctttcttttctctcgctgtt---ttctaattttgccttgtgtttataact--tccatacactttg-- 38890148  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    |||||||||  ||||||  ||||||||||| ||||| | | |||||||| ||||||||    
T  38890147 tttggttgctagattattccttgctccacatatcaaatattttattggtgtgattttt 38890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 18709130 - 18709003
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||| ||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||  |||||||||||||||||| |||||    
T  18709130 tctcgccgttgttttctactattggcttgtatttataacttt--catacactttg-ttttggttgcttgattatgccttgctccacacatcaag-ttgtt 18709035  T
Q  143 attggtat-gatttttcatcgaattcgcaaca 173  Q
    |||||| | | ||||||||| ||||| |||||    
T  18709034 attggtgtggttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 22134567 - 22134476
Alignment:
Q  59 tacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatt 154  Q
    |||||||||||||| ||||  |||||||||||| ||||| |||||||||  |||||||| |||||||||||||||||| ||||||||||| |||||    
T  22134567 tacttttggcttgtattta--attgttccatacactttg-ttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 41997858 - 41997968
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||||||||||||  ||||| |||||| |  ||||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||| |||||||| ||    
T  41997858 tgttttctacttttgt-ttgtgattataact--tccatacactttg-ttttggttgcttgattatcactttctccacacatcaagtttattattggtgtg 41997953  T
Q  152 atttttcatcgaatt 166  Q
     ||||||||| ||||    
T  41997954 ttttttcatcaaatt 41997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18534847 - 18534689
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    |||||| |||| |||||||| | ||||||||||||| | ||||||||||| ||   |||||||||||  |||||||||||| |  ||||||| ||||| |    
T  18534847 ccgaacagggtaaacaaatttcgtgtgttctctctttc-tttctctcgctatt---ttctacttttgt-ttgtgtttataact--tccatacactttg-t 18534756  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    ||||||||| |||||||  ||||||||||||||||||| | |||||||| |||  |||||||||||||    
T  18534755 tttggttgcttgattattacttgctccacacatcaagtattttattggtgtga-gtttcatcgaattc 18534689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 19096298 - 19096370
Alignment:
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||| ||| ||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  19096298 ttggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgcaaca 19096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 38270091 - 38269995
Alignment:
Q  72 tgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||||||||||||   ||| |||||||||| ||| |||| ||| |||||||||||||||||||||||||| || ||||  ||||||||| |||    
T  38270091 tgtttataattgttccatac---ttg-ttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtg-ttttctatcgaattcccaa 38269997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 619464 - 619298
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||| ||  |||||||||||| |  |||||| |||||||||||||||||||| |||||| |||||| |||   || | |||  |    
T  619464 ccgaactgggtcaacaaattattttgtgttctctctttc--ttctct-gctgttgttttctacttttg-cttgtgattataactgtg--atccacttgta 619371  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||  |||||| ||| |||| ||| ||||||||||||| ||| |||||||| || ||| ||||||||| |||||||    
T  619370 tt--ggttgcttgactatcccttactccacacatcaaatttattattggtgtgttttctcatcgaatccgcaaca 619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 19323061 - 19323177
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||| |||||||| || |||||||||| |  ||||||| |||| ||||| ||||| |||||||  ||||||||||||||||||| | |||||||| ||    
T  19323061 tgttttatacttttg-ctcgtgtttataact--tccatacacttt-attttagttgcttgattattacttgctccacacatcaagtattttattggtgtg 19323156  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    | |||||||||||||| |||||    
T  19323157 a-ttttcatcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 8756265 - 8756103
Alignment:
Q  2 cgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||||| |||||||| | ||||||||||||| | |||||||||   ||||||| |||||||| ||||||||||||| |||  |  ||   ||| ||    
T  8756265 cgaactgggtaaacaaattttgtgtgttctctctttc-tttctctcg---ttgttttttacttttg-cttgtgtttataactgtcacccac---ttg-tt 8756175  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||  ||||||||||||||||||| | |||||| | ||| |||||||||||||| |||||    
T  8756174 ttggttgcttgattattacttgctccacacatcaagtattttattgatgtga-ttttcatcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 18311275 - 18311215
Alignment:
Q  114 tatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||| |||||    
T  18311275 tatcacttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 22295485 - 22295646
Alignment:
Q  3 gaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||| |||||||| | ||||||||||||||| ||||||||||||||   |||||| |||| ||||||||||||||||||||   | |  |||| |    
T  22295485 gaactgggtaaacaaatttcatgtgttctctcttcc-tttctctcgctgtt---ttctacctttg-cttgtgtttataattgttcc---cacactgatat 22295576  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| | ||||||  | |||||| | ||||||||| | |||||||| |||||||| | ||||||| |||||    
T  22295577 tggttacttgatta--ttttgctctagacatcaagtattttattggtgtgattttttaacgaattcacaaca 22295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 12102450 - 12102566
Alignment:
Q  52 tgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatg 151  Q
    |||||| |||||||| ||||||||||||| |  ||||||| ||||| ||||||||||  | ||||  |||||||||||||||||||   |||||||| ||    
T  12102450 tgttttttacttttg-cttgtgtttataact--tccatacactttg-ttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtg 12102545  T
Q  152 atttttcatcgaattcgcaaca 173  Q
    | |||||||||||||| |||||    
T  12102546 a-ttttcatcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 25357963 - 25358042
Alignment:
Q  4 aactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttcc 87  Q
    |||||||| |||||||| ||||||  |||||   ||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  25357963 aactgggtaaacaaatttttgtgtgttctctcttctttctctcg---ttgttttctacttttg-cttgtgtttataattgttcc 25358042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16455559 - 16455591
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctc 33  Q
    |||||||||||||||||||||||||||||||||    
T  16455559 ccgaactgggtcaacaaattcttgtgttctctc 16455591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 18537489 - 18537360
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | || |||||||||| | |||||||||   ||||||| ||||||||  |||||||||||| |  ||||||| ||||| |    
T  18537489 ccgaactgggtaaacaaattttgtgcgttctctctttc-tttctctcg---ttgttttatacttttgt-ttgtgtttataact--tccatacactttg-t 18537398  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagt 137  Q
    |||| |||| |||||||  |||||||||||||||||||    
T  18537397 tttgattgcttgattattacttgctccacacatcaagt 18537360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 30136890 - 30136945
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataa 80  Q
    |||||||||||||| | |||||||   ||||||||||||||||||| ||||||||||||    
T  30136890 ttgtgttctctctttcttttctct---tgttgttttctacttttggtttgtgtttataa 30136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 31983501 - 31983390
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||  ||||||||||||||||||||   | | ||||| |||||||| ||||||  | |||||||||||||||| | | |||||| |     
T  31983501 gttgttttctactttta-cttgtgtttataattgttcc---cacgttgatattggttgcttgatta--ttttgctccacacatcaaatattttattgatg 31983408  T
Q  150 tga-tttttcatcgaatt 166  Q
    ||| ||||||||||||||    
T  31983407 tgattttttcatcgaatt 31983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 47150889 - 47150783
Alignment:
Q  19 ttcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatct 118  Q
    ||||||||||||||||| | |||||||||   |||| |||||||||||  |||||||||||||||||||   | | |||||||||||||| |||||| ||    
T  47150889 ttcttgtgttctctctttc-tttctctcg---ttgtcttctacttttgt-ttgtgtttataattgttcc---cacattgattttggttgcttgatta-ct 47150799  T
Q  119 cttgctccacacatcaa 135  Q
     ||||||||||||||||    
T  47150798 -ttgctccacacatcaa 47150783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15073030 - 15073202
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  15073030 ccgaactgggtcaacaaattattttgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg- 15073127  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| |||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15073128 ttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41382981 - 41383154
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||     
T  41382981 ccgaactaggtcaacaaattcttttgtgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttg- 41383079  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  41383080 ttttgattgcttgattatctcttgctccacacatcaagtttgttattggtgtggtttttcatcgaactcgcaaca 41383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28251583 - 28251410
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||     
T  28251583 ccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttg- 28251485  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||    
T  28251484 ttttggttgcctgattattccttgctccacacatcaag-ttgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41385063 - 41385233
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||      
T  41385063 ccgaactgggtcaacaaattcttttctgttctctcttccatttctctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttg 41385162  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||  |||||||| ||||||||||    ||||||||||||| || ||||||||||| ||||||||||||    
T  41385163 ttttggttgtttgattatcccttgctccac----caagtttgttatttgtgtgatttttcatggaattcgcaaca 41385233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 15068302 - 15068472
Alignment:
Q  3 gaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    |||||||| ||||||||||||  |||||| | ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  15068302 gaactgggccaacaaattcttttgtgttcacccttct-tttctctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttg-tt 15068399  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| ||| |||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15068400 ttggttgcttgactatcccttgttccacacatcaagtttgttgttggtgtgatttttcatcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 14808080 - 14808252
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||     
T  14808080 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gttgttttctacttttggcttgtgtttataattgtttcatacactttg- 14808176  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatga-tttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  14808177 ttttggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgattttttcatcgaatgcgcaaca 14808252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14419206 - 14419035
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||||||| |||||||||||||||||||||||| |||||     
T  14419206 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacactttg- 14419110  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||||| || ||| ||||||||||| |||||    
T  14419109 ttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 18811075 - 18811202
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    ||||||||| |||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18811075 tctcgctgtcgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgtt 18811171  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  18811172 attggtgtgatttttcatcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 37214280 - 37214109
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  ||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||     
T  37214280 ccgaactgggtcaacaaattcttttgtgttttctcttcc-tttctctctc-gttgttttctacttttggcttgtgtttataattgttctatacactttg- 37214184  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| || ||||||||| ||||| |||||||||||||||||||| || ||| ||||| ||||| |||||    
T  37214183 ttttggttgcttgcttatctcttactccatacatcaagtttgttattggtgtgttttctcatcaaattcacaaca 37214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35872469 - 35872301
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||    |||||||||||||||||||||||||||||||| |||||||| |||| |    
T  35872469 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctc----ttgttttctacttttggcttgtgtttataatttttccatacacttt-a 35872376  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||| || ||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  35872375 ttttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 33541403 - 33541253
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||| |||||||| | | || ||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||    
T  33541403 ttgtgttctctcttcc-tttctctctc-gctgatttctacttttggcttgtgtttataattgttccatacacttt-attttgattgcttgattatccctt 33541307  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaacaga 175  Q
     |||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  33541306 actccacacatcaagtttgttattggtgtgatttttgatcgaattcacaacaga 33541253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 18813249 - 18813378
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| || |||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| |||||    
T  18813249 tctcgccgtcgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctctacatatcaag-ttgtt 18813345  T
Q  143 attggtatgatttttcatcgaattcgcaacaga 175  Q
    |||||| ||||||||||||||||||||||||||    
T  18813346 attggtgtgatttttcatcgaattcgcaacaga 18813378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25952840 - 25953010
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||| |||||||||||||||  |||||||||||| | |||||||||| |||   |||||||||||| ||||||||||||||| | ||||| |||| |    
T  25952840 ccgaactaggtcaacaaattcttttgtgttctctctttcttttctctcgccgtt---ttctacttttggattgtgtttataattgcttcatacacttt-a 25952935  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  25952936 ttttggttgcttgattatcactttctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 22684620 - 22684491
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22684620 tctcgccgttgttttctacttttggcttgtattta--attgttccataaactttgattttggttgcctgattatcccttgctccacacatcaag-ttgtt 22684524  T
Q  143 attggtatgattttt--catcgaattcgcaaca 173  Q
    |||||| ||||||||  ||||||||||||||||    
T  22684523 attggtgtgattttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 13858498 - 13858341
Alignment:
Q  3 gaactgggtcaacaaattctt-gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||| ||||||||||| |||||||| ||| | |||||||| |||||   ||||||||||||||||||||||||| |  ||||||| ||||| |||    
T  13858498 gaactgggtaaacaaattctttgtgttctccctttc-tttctctcactgtt---ttctacttttggcttgtgtttataact--tccatacactttg-ttt 13858406  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13858405 tggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgatttttcatcgaatt 13858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 14477630 - 14477740
Alignment:
Q  62 ttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatc 161  Q
    ||||||||||||||||| |||||| ||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  14477630 ttttggcttgtgtttatgattgtttcatacactttg-ttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 14477728  T
Q  162 gaattcgcaaca 173  Q
    |||||| |||||    
T  14477729 gaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 30480519 - 30480352
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||| | | ||||||||||||||||||||| |||||||||||||||||| |||||     
T  30480519 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctctc-gctgttttctacttttggcttgtatttataattgttccatacactttg- 30480423  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt-tcatcgaattcg 168  Q
    |||||||||| |||||||  ||| ||||||||||||| |||||||||||| | ||||| |||| |||||||    
T  30480422 ttttggttgcttgattattccttactccacacatcaaatttgttattggtgtcattttctcattgaattcg 30480352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 43530491 - 43530609
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |    
T  43530491 ttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgt 43530586  T
Q  151 gatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||||||||||||    
T  43530587 gatttttcattgaattcgcaaca 43530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 36865856 - 36866002
Alignment:
Q  1 ccgaactgggtcaacaaattct--tgtgttctctcttccctttctctcgct-gttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    ||||||||||| ||||||||||  |||||||| ||||   ||||| || || ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  36865856 ccgaactgggtaaacaaattctcttgtgttctgtctttt-tttctttctctcgttgttttctacttttggcttttgtttataattgttccatacactttg 36865954  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
     |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  36865955 -ttttggttgcttgattatcacttgctccacacatcaagtttgttattg 36866002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 3874361 - 3874487
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| || |||||||||||||||||||||||| |||||    
T  3874361 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttggttatctcttgctccacacatcaag-ttgtt 3874456  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||| ||||||| |||||    
T  3874457 attggtgtgatttttcaacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 3883562 - 3883436
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||  ||||||||||||||||||| |||    
T  3883562 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtt-gtt 3883467  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||| | ||||||||||||||||||||||||    
T  3883466 attgatgtgatttttcatcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 27827353 - 27827479
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  27827353 tctcgccgttgttttctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgtt 27827449  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  27827450 attggtgtga-ttttcatcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 28283188 - 28283062
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| |||||  || || ||||| ||||| |||||||||| |||||||| |||||||||||||||||||| |||    
T  28283188 tctcgccgttgttttctacttttggcttgtatttat--ttttttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gtt 28283093  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||||||||||||||||||||||||    
T  28283092 attggtgtgatttttcatcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 27829664 - 27829791
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||| | ||||  |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  27829664 tctcgccgttgttttctacttttgacttatattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgtt 27829760  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||||||||||    
T  27829761 attggtgtga-ttttcatcgaattcgcaacag 27829791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 4424386 - 4424512
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| |||||||| ||||||||||||| |||| |||||    
T  4424386 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacaccaag-ttgtt 4424482  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| |||||||||||||| |||||    
T  4424483 attggtgtga-ttttcatcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 32339677 - 32339803
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||| ||||||||||||| ||||| ||||  |||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  32339677 tctcgccgttattttctacttttgacttgtattta--attgttccatacactttgattttggttgcttgattatcccttgccccacacatcaag-ttgtt 32339773  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| ||| ||||||||||||||||||||    
T  32339774 attggtgtga-ttttcatcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 15809586 - 15809714
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||| ||||| ||||| ||||  |||||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  15809586 tctcgccgttgttttctatttttgccttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 15809681  T
Q  143 attggtatgatttttcatcgaattcgcaacagaa 176  Q
    |||||| ||| |||||||||||||||||||||||    
T  15809682 attggtgtga-ttttcatcgaattcgcaacagaa 15809714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21482630 - 21482798
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-ga 98  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||||   |||||||||||||| | ||||| ||||||   |||||||| ||||       
T  21482630 ccgaactgggtaaacaaatttcgtgtgttctctctttcttttctctcgc---tgttttctactttt-gtttgtgattataa--cttccatacactttatt 21482723  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  21482724 ttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 24873167 - 24873038
Alignment:
Q  43 tctcgctgttgttttctac-ttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||| ||||||||||| ||||||| | |  ||||| ||||| |||||||||| | |||||| |||||||||||||||||| ||||    
T  24873167 tctcgccgttgttttctaccttttggcttgtatttataacttt--catacactttgtttttggttgcttaattatcccttgctccacacatcaag-ttgt 24873071  T
Q  142 tattggtatgatttttcatcgaattcgcaacag 174  Q
    ||||||| |||||||||||||||||| ||||||    
T  24873070 tattggtgtgatttttcatcgaattcacaacag 24873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 27911447 - 27911567
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||| | ||  || |||||| ||||||||||||||||||||| ||||||||     
T  27911447 gttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagttt--ctaattatcacttgctccacacatcaagttttttattggtg 27911543  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | ||||| |||||    
T  27911544 tgatttttcaacaaattcacaaca 27911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 27957866 - 27957986
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||| | ||  || |||||| ||||||||||||||||||||| ||||||||     
T  27957866 gttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagttt--ctaattatcacttgctccacacatcaagttttttattggtg 27957962  T
Q  150 tgatttttcatcgaattcgcaaca 173  Q
    |||||||||| | ||||| |||||    
T  27957963 tgatttttcaacaaattcacaaca 27957986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 5372148 - 5372042
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    ||||||||||||||||||||| |||||||| ||||||||||  ||| ||||| ||||| ||| ||||  ||||||||||||||||||||||||||| | |    
T  5372148 ttgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgt 5372049  T
Q  151 gattttt 157  Q
    |||||||    
T  5372048 gattttt 5372042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 181798 - 181901
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||| ||||| |||||     
T  181798 ccgaactgggtcaacaaattcttttgtgttctctcttct-tttctctcg---ttgttttctacttttggcttgtgtttataattgtttcatacactttg- 181892  T
Q  99 ttttggttg 107  Q
    |||||||||    
T  181893 ttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 27106910 - 27106747
Alignment:
Q  4 aactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||||||||||||||| ||  ||||| |||||| | |||||||||   |||||||||||||||| || ||| |||||| |  ||||||| ||||| |||    
T  27106910 aactgggtcaacaaattattttgtgttttctctttc-tttctctcg---ttgttttctacttttgtct-gtgattataact--tccatacactttg-ttt 27106819  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||| || ||| |||||||||| ||||||    
T  27106818 tggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaatttgcaaca 27106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 15185730 - 15185564
Alignment:
Q  1 ccgaactgggtcaacaaattcttgt--gttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||||||||||||||||||||| |  |||||||||| | |||||||||   ||||||||||||||||  || || |||||| |  ||||||| |||||     
T  15185730 ccgaactgggtcaacaaattcttttttgttctctctttc-tttctctcg---ttgttttctacttttgt-ttatgattataact--tccatacactttg- 15185639  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||||| ||| |||| ||| |||||||||||||||||||||||| | |||||||||| ||||||| |||||    
T  15185638 ttttggttgcttgactatcccttactccacacatcaagtttgttattgatgtgatttttcaccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 609110 - 609230
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt-ggttgcctgattatctcttgctccacacatcaagtttgttattggt 148  Q
    ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||| |||||| ||||||||||||||||||| ||||||| |||||||||||    
T  609110 gttgttttctacttttggcttgtattta--attgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatcaag-ttgttattggt 609206  T
Q  149 atgatttttcatcgaattcgcaaca 173  Q
      || |||||||||||||| |||||    
T  609207 gcga-ttttcatcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 43082348 - 43082472
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| | |||||| |||||||||||||||||| |||||||||||     
T  43082348 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtg 43082443  T
Q  150 tgatttttcatcgaattcgcaacagaact 178  Q
    |||||||| |||  |||| ||||||||||    
T  43082444 tgatttttgatcagattcacaacagaact 43082472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 15956279 - 15956443
Alignment:
Q  3 gaactgggtcaacaaattcttgtgt--tctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||| |||  |||||||||  |||||||||   |||||||||||||| |  ||||| |||||| | |  ||||| ||||| ||    
T  15956279 gaactgggtcaacaaattcttttgtattctctcttct-tttctctcg---ttgttttctactttcgt-ttgtgattataacttt--catacactttg-tt 15956370  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||  ||| |||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  15956371 ttggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 2468143 - 2467979
Alignment:
Q  3 gaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattt 101  Q
    ||||| ||| |||||||| | ||||||||||||| | |||||||||   |||||||||| |||||  ||||| |||||| |  ||| ||| ||||| |||    
T  2468143 gaactaggtaaacaaatttcgtgtgttctctctttcttttctctcg---ttgttttctaattttgttttgtgattataact--tccctacactttg-ttt 2468050  T
Q  102 tggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||| ||| |||| ||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||    
T  2468049 tggttgcttgactatcacttgctccacacatcaagtttattattggtgtga-ttttcatcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 44721211 - 44721318
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||  ||| |||||||| ||||| |||||||||| |||||||| ||| |||||||||||||| |||||    
T  44721211 tctcgccgttgttttctacttttgacttgtattta--attattccatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgtt 44721306  T
Q  143 attggtatgatt 154  Q
    |||||| |||||    
T  44721307 attggtgtgatt 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 21480838 - 21480990
Alignment:
Q  16 aaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt-ggttgcctgatt 114  Q
    |||||| ||||||||||||| | |||||||||   ||||||||| ||||||  ||||| |||||| |  ||||||| ||||| |||| |||||  |||||    
T  21480838 aaattcgtgtgttctctctttcttttctctcg---ttgttttcttcttttgt-ttgtgattataact--tccatacactttgttttttggttgtttgatt 21480931  T
Q  115 atctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
     || ||| ||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  21480932 gtcacttactccacacatcaagtttattattggtgttatttttcatcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31162532 - 31162683
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | |||||||||| ||  |||| |||| | ||||||||||||||||||||||| |||||||   |||||||| ||||| |    
T  31162532 ccgaactgggtaaacaaatttcgtgtgttctcttttttcttt-tctctc-gttgttttctacttttggcttgtatttataa--cttccatacactttg-t 31162626  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttt 156  Q
    ||||||| | | |||||  ||||||||||||||||||| | |||||||| |||||||    
T  31162627 tttggttacttaattattacttgctccacacatcaagtattttattggtgtgatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 43079970 - 43080080
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||| ||||| |||||||   || ||||| ||||| |||||||||| | ||||||  ||||||||||||||||| |||||    
T  43079970 tctcgccgttgttttctacttttgacttgtatttataa--ctttcatacactttg-ttttggttgcttaattatccattgctccacacatcaag-ttgtt 43080065  T
Q  143 attggtatgattttt 157  Q
    |||||| ||||||||    
T  43080066 attggtgtgattttt 43080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1225486 - 1225568
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgtt 85  Q
    ||||||| |||||||||||||||  |||||||||||||  ||||||||||||||   ||||||||||| ||||||||||||||||||    
T  1225486 ccgaactaggtcaacaaattcttttgtgttctctcttct-tttctctcgctgtt---ttctacttttgacttgtgtttataattgtt 1225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 183251 - 183310
Alignment:
Q  114 tatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  183251 tatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 31578292 - 31578148
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgtt--ccatacgctttga 98  Q
    ||||||||||| |||||||| |||||| ||||||   ||||||||||   |||||||||||||||| ||||||||||||||||||  |||||    ||||    
T  31578292 ccgaactgggtaaacaaatt-ttgtgtgctctct---ctttctctcg---ttgttttctacttttg-cttgtgtttataattgttgcccata----ttga 31578205  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
    | |||||||| ||||||  | ||||| |||||||||||| | ||||| || ||||||||    
T  31578204 tattggttgcttgatta--ttttgctacacacatcaagtattttattcgtgtgattttt 31578148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 3005572 - 3005486
Alignment:
Q  84 ttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||  ||||||||  |||||||  ||||||||||||||||||| | |||||||| ||| |||||||||||||| |||||    
T  3005572 ttccatacactttg--tttggttgtttgattattacttgctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 2467932 - 2467887
Alignment:
Q  120 ttgctccacacatcaagtttgttattggtatgatttttcatcgaatt 166  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||    
T  2467932 ttgctccacacatcaagtttattattggtgtga-ttttcatcgaatt 2467887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 31035440 - 31035587
Alignment:
Q  1 ccgaactgggtcaacaaa-ttcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||| ||| |||||||||||||  |||||||||||   ||||||||| |||| |||||||||| ||||||||||   | | |||||    
T  31035440 ccgaactgggtaaacaaatttcgtgtgttctctctt-tctttctctcgc---tgttttctagtttt-gcttgtgtttttaattgttcc---cacgttgat 31035531  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgattttt 157  Q
     |||||||| ||| ||    || ||||||||||||||| | |||||||| ||||||||    
T  31035532 attggttgcttgacta--atttcctccacacatcaagtattttattggtgtgattttt 31035587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 1225571 - 1225619
Alignment:
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattgg 147  Q
    |||||||||| |||||||  |||| |||||||||||||| |||||||||    
T  1225571 ttttggttgcttgattattccttgttccacacatcaagtatgttattgg 1225619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 111; Significance: 9e-56; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 50289 - 50457
Alignment:
Q  4 aactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  50289 aactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 50386  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50387 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 52288 - 52456
Alignment:
Q  4 aactgggtcaacaaattcttgtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatttt 102  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  52288 aactgggtcaacaaattcttgtgttcttctcttctttttctctcta-gttgttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 52385  T
Q  103 ggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52386 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 183608 - 183481
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| ||| |||||| ||||||||||||||||||||||||||| |||||    
T  183608 tctcgccgttgttttctacttttggcttgtattta--attgttccatacattttg-tttcggttgcttgattatctcttgctccacacatcaag-ttgtt 183513  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| |||||| |||||||||||| |||||    
T  183512 attggtgtgatttctcatcgaattcggaacag 183481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14398 - 14231
Alignment:
Q  1 ccgaactgggtcaacaaattcttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgatt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  14398 ccgaactgggtcaacaaattcttgtgttctctcttcc-tttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttg-tt 14302  T
Q  101 ttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  14301 ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcacaaca 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 15393 - 15433
Alignment:
Q  127 acacatcaagtttgttattggtatgatttttcatcgaattc 167  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15393 acacatcaagtttgttattggtgtgatttttcatcgaattc 15433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 35866 - 36037
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttga 98  Q
    ||||| |||||||||||||| ||  |||||||||||||  |||||||||||||||||||| | |||||||||||||||||||||||| ||||| |||||     
T  35866 ccgaattgggtcaacaaattattttgtgttctctcttct-tttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgt 35964  T
Q  99 ttttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  35965 ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgcaa 36037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 85526 - 85671
Alignment:
Q  22 ttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctctt 121  Q
    |||||||||||||||  |||||||||   |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  85526 ttgtgttctctcttct-tttctctcg---ttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctctt 85621  T
Q  122 gctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaa 171  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  85622 gctccacacattaagattgttattggtgtgatttttcatcgaattcgcaa 85671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 11489 - 11315
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgcttt-g 97  Q
    |||||| ||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||      
T  11489 ccgaaccgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttat 11390  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat-ttttcatcgaattcgcaac 172  Q
     |||| ||||| | |||||  ||| |||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  11389 tttttcgttgcttaattattccttactccacacatcaag-ttgttattggtgtgatattttcatcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 6520 - 6646
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||| |||   ||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  6520 tctcgccgttgttttctacttttggcttgtatttattatt---ccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgtt 6615  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| |||||||||||||||||| |||||    
T  6616 attggtgtgatttttcatcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 357 - 473
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  357 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 453  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    || ||| ||||||| |||||    
T  454 ttctcaacgaattcacaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 69259 - 69132
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||||| |  |||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  69259 tctcgccgttgttttctacttttggcttgtatttataact--tccatacattttg-ttttggttgcctgattatcccttgctccacacatcaagtttgtt 69163  T
Q  143 attggtatgatttttcatcgaattcgcaacag 174  Q
    |||||| ||| |||||||||||||| ||||||    
T  69162 attggtgtga-ttttcatcgaattcacaacag 69132  T

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Target: scaffold1674 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 1418 - 1298
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||||| || |||||||||||||| |||||    
T  1418 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctttttctccacacatcaag-ttgtt 1323  T
Q  143 attggtatgatttttcatcgaattc 167  Q
    |||||| ||||||||||||||||||    
T  1322 attggtgtgatttttcatcgaattc 1298  T

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Target: scaffold0038 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 41448 - 41325
Alignment:
Q  45 tcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttat 144  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  41448 tcgccgttgttttctacttttggcttgtattta--attgttccatacactttg-ttttgattgcttgattatctcttgctccacacatcaag-ttgttat 41353  T
Q  145 tggtatgatttttcatcgaattcgcaaca 173  Q
    |||| ||| |||||||||||||| |||||    
T  41352 tggtgtga-ttttcatcgaattcacaaca 41325  T

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Target: scaffold0068 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 29498 - 29617
Alignment:
Q  50 gttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggta 149  Q
    ||||||||||||||||||||| | ||||  |||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||     
T  29498 gttgttttctacttttggcttttattta--attgttccatacactttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtg 29593  T
Q  150 tgatttttcatcgaattcgcaacag 174  Q
    ||| |||||||||||||||||||||    
T  29594 tga-ttttcatcgaattcgcaacag 29617  T

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Target: scaffold0140 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 24723 - 24839
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  24723 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 24819  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  24820 ttttcgtcgaattcacaaca 24839  T

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Target: scaffold0140; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 22448 - 22564
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    |||||||||||||||| || |||   ||| |||||| |||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||| ||||    
T  22448 ttttctacttttggctcgtatttt--attattccatgcgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgat 22544  T
Q  154 ttttcatcgaattcgcaaca 173  Q
    ||||| |||||||| |||||    
T  22545 ttttcgtcgaattcacaaca 22564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 12841 - 12715
Alignment:
Q  43 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgtt 142  Q
    |||||| |||||| |||||||||||||||| ||||||| | |  ||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  12841 tctcgccgttgttgtctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 12746  T
Q  143 attggtatgatttttcatcgaattcgcaaca 173  Q
    |||||| | |||||||||||||||| |||||    
T  12745 attggtgtcatttttcatcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 1408 - 1309
Alignment:
Q  54 ttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgat 153  Q
    ||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  1408 ttttctacttttggcttgtattta--attgttacatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgat 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4267 - 4410
Alignment:
Q  1 ccgaactgggtcaacaaattctt--gtgttct-ctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttg 97  Q
    |||||| ||||||||||||||||  ||||||| |||||   ||||||||||||||   ||||||||||||||||||||||||||| ||| |||| |||      
T  4267 ccgaaccgggtcaacaaattcttttgtgttcttctcttga-tttctctcgctgtt---ttctacttttggcttgtgtttataattattctatacacttc- 4361  T
Q  98 attttggttgcctgattatctcttgctccacacatcaagtttgttattg 146  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||||||    
T  4362 attttgattgcttgattatcccttactccacacatcaagtttgttattg 4410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1657 - 1493
Alignment:
Q  1 ccgaactgggtcaacaaatt-cttgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | ||||||||||||| | ||||||||    ||||||||||||||||||||||||||||||   |||||||| |||||      
T  1657 ccgaactgggtaaacaaatttcgtgtgttctctctttcttttctctca---ttgttttctacttttggcttgtgtttataa--cttccatacactttg-- 1565  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||||||||| |||||||  ||||||||||||||||| | | |||||||| ||| ||||||| |||||| |||||    
T  1564 tttggttgcttgattattacttgctccacacatcaaatat-ttattggtgtga-ttttcattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 4636 - 4535
Alignment:
Q  51 ttgttttctacttttggcttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgttattggtat 150  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||||||||  ||||||||||| |    
T  4636 ttgttttctacttttggcttgtatt--taattgttccatacgctttgacttt-gttgcttgattatcccttactccacacatcaa-attgttattggtgt 4541  T
Q  151 gatttt 156  Q
    ||||||    
T  4540 gatttt 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 3200 - 3319
Alignment:
Q  43 tctcgctgttgttttctacttttgg-cttgtgtttataattgttccatacgctttgattttggttgcctgattatctcttgctccacacatcaagtttgt 141  Q
    |||||| |||||||||||||||| | ||||| ||||||| | |  ||||| |||||  ||||||||| |||||||| |||||||||||||||||| ||||    
T  3200 tctcgccgttgttttctactttttgacttgtatttataacttt--catacactttg--tttggttgcttgattatcccttgctccacacatcaag-ttgt 3294  T
Q  142 tattggtatgatttttcatcgaattc 167  Q
    ||||||| ||| ||||||||||||||    
T  3295 tattggtgtga-ttttcatcgaattc 3319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 1 - 53
Alignment:
Q  111 gattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaa 164  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1 gattatctcttgctccacacatcaag-ttgttattggtgtgatttttcatcgaa 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16665 - 16501
Alignment:
Q  1 ccgaactgggtcaacaaattct-tgtgttctctcttccctttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacgctttgat 99  Q
    ||||||||||| |||||||| | |||||| |||||| | |||||||||   |||||||||| ||||| ||||| ||||||| |  ||||| | |||||      
T  16665 ccgaactgggtaaacaaattttgtgtgttttctctttcttttctctcg---ttgttttctatttttg-cttgtatttataact--tccatgcactttg-- 16574  T
Q  100 tttggttgcctgattatctcttgctccacacatcaagtttgttattggtatgatttttcatcgaattcgcaaca 173  Q
    ||| ||||| |||||||  ||||||||||||||||||| | |||||||||| |||||| ||||||||| |||||    
T  16573 tttagttgcttgattattacttgctccacacatcaagtattttattggtataattttt-atcgaattcacaaca 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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