View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12598_low_6 (Length: 615)

Name: NF12598_low_6
Description: NF12598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12598_low_6
NF12598_low_6
[»] chr8 (70 HSPs)
chr8 (264-601)||(39030120-39030485)
chr8 (163-262)||(38598965-38599064)
chr8 (163-273)||(25288076-25288187)
chr8 (131-262)||(34213765-34213896)
chr8 (163-263)||(1231526-1231626)
chr8 (186-262)||(7393168-7393244)
chr8 (163-262)||(1232799-1232896)
chr8 (182-262)||(34665771-34665851)
chr8 (182-262)||(33497635-33497715)
chr8 (123-262)||(34214488-34214628)
chr8 (192-262)||(4463455-4463525)
chr8 (182-237)||(34666559-34666614)
chr8 (182-258)||(4970130-4970206)
chr8 (186-258)||(24377186-24377258)
chr8 (182-252)||(24379015-24379085)
chr8 (186-258)||(29574747-29574819)
chr8 (105-172)||(16388796-16388863)
chr8 (183-262)||(27437539-27437618)
chr8 (182-237)||(33497042-33497097)
chr8 (188-258)||(29575910-29575980)
chr8 (127-172)||(23698536-23698581)
chr8 (107-172)||(36928567-36928632)
chr8 (106-177)||(2693787-2693859)
chr8 (105-173)||(30711987-30712055)
chr8 (105-173)||(30719764-30719832)
chr8 (190-258)||(36574822-36574890)
chr8 (121-172)||(4405946-4405997)
chr8 (186-221)||(7392250-7392285)
chr8 (185-244)||(9632347-9632406)
chr8 (126-173)||(12199210-12199257)
chr8 (126-173)||(12443638-12443685)
chr8 (121-172)||(13186151-13186202)
chr8 (183-262)||(27436564-27436643)
chr8 (105-172)||(35756673-35756740)
chr8 (121-171)||(31608799-31608849)
chr8 (196-262)||(37342976-37343042)
chr8 (126-172)||(38862709-38862755)
chr8 (196-262)||(43866835-43866901)
chr8 (131-172)||(1425318-1425359)
chr8 (131-172)||(3041721-3041762)
chr8 (180-249)||(20096325-20096394)
chr8 (131-172)||(23663810-23663851)
chr8 (107-172)||(36186339-36186404)
chr8 (131-172)||(36325325-36325366)
chr8 (196-249)||(36623560-36623613)
chr8 (131-172)||(38845564-38845605)
chr8 (131-172)||(39071767-39071808)
chr8 (131-172)||(40775915-40775956)
chr8 (131-172)||(44407122-44407163)
chr8 (105-173)||(20385658-20385726)
chr8 (105-173)||(20386700-20386768)
chr8 (105-173)||(30710945-30711013)
chr8 (194-262)||(36623353-36623421)
chr8 (194-262)||(38600265-38600333)
chr8 (194-262)||(40422475-40422543)
chr8 (163-262)||(7677-7776)
chr8 (116-171)||(22890275-22890330)
chr8 (191-250)||(36576029-36576088)
chr8 (163-262)||(36623637-36623736)
chr8 (163-262)||(43866712-43866811)
chr8 (196-262)||(547629-547695)
chr8 (163-249)||(27857026-27857112)
chr8 (131-172)||(2266583-2266624)
chr8 (131-172)||(8316884-8316925)
chr8 (131-172)||(12273149-12273190)
chr8 (131-172)||(22915654-22915695)
chr8 (163-240)||(23424796-23424873)
chr8 (116-177)||(24085860-24085921)
chr8 (131-172)||(35449874-35449915)
chr8 (105-177)||(31873169-31873241)
[»] scaffold0347 (2 HSPs)
scaffold0347 (11-261)||(14440-14691)
scaffold0347 (132-262)||(13610-13740)
[»] chr1 (84 HSPs)
chr1 (63-260)||(25065858-25066055)
chr1 (121-260)||(25064936-25065075)
chr1 (131-262)||(13295136-13295267)
chr1 (123-258)||(46282753-46282888)
chr1 (163-262)||(49093042-49093141)
chr1 (182-258)||(32619389-32619465)
chr1 (163-262)||(2828194-2828293)
chr1 (183-258)||(32238704-32238779)
chr1 (182-249)||(32622375-32622442)
chr1 (183-258)||(50062968-50063043)
chr1 (182-267)||(51935218-51935303)
chr1 (105-177)||(34850335-34850407)
chr1 (182-262)||(46282072-46282152)
chr1 (191-262)||(13295608-13295679)
chr1 (156-258)||(6345630-6345732)
chr1 (26-75)||(25065797-25065846)
chr1 (105-173)||(37578462-37578530)
chr1 (105-172)||(24009811-24009878)
chr1 (182-258)||(6344260-6344336)
chr1 (105-172)||(14879062-14879129)
chr1 (183-262)||(24701573-24701652)
chr1 (121-172)||(32917351-32917402)
chr1 (182-225)||(49093832-49093875)
chr1 (196-262)||(29042879-29042945)
chr1 (131-172)||(1841550-1841591)
chr1 (107-172)||(6367653-6367718)
chr1 (128-172)||(1103552-1103596)
chr1 (163-262)||(2829539-2829645)
chr1 (163-267)||(5183790-5183894)
chr1 (105-172)||(4960631-4960698)
chr1 (163-234)||(10019657-10019728)
chr1 (126-177)||(10304009-10304060)
chr1 (126-177)||(10304146-10304197)
chr1 (114-177)||(34849097-34849160)
chr1 (121-172)||(40210656-40210707)
chr1 (105-172)||(46163121-46163188)
chr1 (118-169)||(48691242-48691293)
chr1 (194-276)||(29043070-29043152)
chr1 (131-173)||(31514582-31514624)
chr1 (131-172)||(183487-183528)
chr1 (131-172)||(4716733-4716774)
chr1 (105-177)||(9443658-9443731)
chr1 (116-177)||(13245936-13245997)
chr1 (107-172)||(13914339-13914404)
chr1 (131-172)||(24905432-24905473)
chr1 (131-172)||(25647975-25648016)
chr1 (105-190)||(27999121-27999206)
chr1 (131-172)||(28011454-28011495)
chr1 (131-172)||(33442859-33442900)
chr1 (131-172)||(36694544-36694585)
chr1 (131-172)||(36710645-36710686)
chr1 (131-172)||(42248564-42248605)
chr1 (132-177)||(42267389-42267434)
chr1 (195-267)||(5926837-5926909)
chr1 (134-178)||(16970834-16970878)
chr1 (186-234)||(28534820-28534868)
chr1 (163-263)||(29980922-29981022)
chr1 (184-220)||(50062246-50062282)
chr1 (163-262)||(1040299-1040398)
chr1 (163-262)||(1047205-1047304)
chr1 (163-262)||(2953748-2953847)
chr1 (121-172)||(17662136-17662187)
chr1 (163-262)||(19755689-19755788)
chr1 (133-172)||(40772598-40772637)
chr1 (105-172)||(41098824-41098891)
chr1 (105-172)||(43758913-43758980)
chr1 (105-172)||(44523406-44523473)
chr1 (163-262)||(46849942-46850041)
chr1 (183-258)||(52563656-52563731)
chr1 (163-249)||(5926533-5926619)
chr1 (192-250)||(36381451-36381509)
chr1 (196-262)||(46849852-46849918)
chr1 (107-172)||(19017901-19017966)
chr1 (131-172)||(19515910-19515951)
chr1 (116-177)||(21444680-21444741)
chr1 (116-177)||(22103787-22103848)
chr1 (131-172)||(26024514-26024555)
chr1 (131-172)||(30711418-30711459)
chr1 (131-172)||(34464745-34464786)
chr1 (131-172)||(35152434-35152475)
chr1 (131-172)||(47999388-47999429)
chr1 (131-172)||(52134159-52134200)
chr1 (194-262)||(26953102-26953170)
chr1 (105-173)||(35152613-35152681)
[»] chr7 (55 HSPs)
chr7 (121-262)||(38643551-38643692)
chr7 (63-262)||(38644571-38644759)
chr7 (105-262)||(45915750-45915907)
chr7 (123-262)||(4227132-4227271)
chr7 (131-274)||(12644101-12644244)
chr7 (131-262)||(12643101-12643232)
chr7 (127-262)||(47558031-47558166)
chr7 (131-262)||(4226126-4226257)
chr7 (163-262)||(7158232-7158331)
chr7 (163-262)||(12929288-12929387)
chr7 (163-262)||(12930773-12930872)
chr7 (131-262)||(45914527-45914656)
chr7 (182-262)||(37284110-37284190)
chr7 (182-262)||(37289329-37289409)
chr7 (131-262)||(27479988-27480119)
chr7 (182-258)||(22661362-22661438)
chr7 (26-79)||(43123398-43123451)
chr7 (182-262)||(27480766-27480846)
chr7 (186-258)||(31695637-31695709)
chr7 (105-172)||(2640448-2640515)
chr7 (105-172)||(5457177-5457244)
chr7 (121-172)||(32053429-32053480)
chr7 (188-258)||(31694476-31694546)
chr7 (105-172)||(23181264-23181331)
chr7 (105-172)||(24388910-24388977)
chr7 (105-172)||(28469278-28469345)
chr7 (105-172)||(40379860-40379927)
chr7 (163-262)||(43937895-43937994)
chr7 (163-262)||(43938178-43938277)
chr7 (107-172)||(3914229-3914294)
chr7 (127-172)||(6571104-6571149)
chr7 (131-172)||(17102111-17102152)
chr7 (131-172)||(27396891-27396932)
chr7 (131-172)||(27991830-27991871)
chr7 (131-172)||(30948425-30948466)
chr7 (131-172)||(32680860-32680901)
chr7 (131-172)||(42731510-42731551)
chr7 (131-172)||(45010900-45010941)
chr7 (94-150)||(22539252-22539308)
chr7 (182-234)||(37563657-37563709)
chr7 (105-172)||(10935885-10935952)
chr7 (110-177)||(11397464-11397531)
chr7 (194-244)||(5280586-5280636)
chr7 (186-248)||(7159235-7159297)
chr7 (163-249)||(12931022-12931108)
chr7 (196-262)||(15827915-15827981)
chr7 (194-240)||(37563377-37563423)
chr7 (131-172)||(22871573-22871614)
chr7 (131-172)||(32299001-32299042)
chr7 (131-172)||(34928915-34928956)
chr7 (105-166)||(37656949-37657010)
chr7 (131-172)||(39686799-39686840)
chr7 (185-250)||(40022551-40022615)
chr7 (131-172)||(45010689-45010730)
chr7 (125-177)||(13311323-13311375)
[»] chr2 (57 HSPs)
chr2 (123-271)||(25624393-25624541)
chr2 (131-262)||(25623289-25623420)
chr2 (163-262)||(24387352-24387451)
chr2 (162-262)||(24388255-24388355)
chr2 (182-274)||(20101758-20101851)
chr2 (182-262)||(20982525-20982605)
chr2 (182-262)||(29957818-29957898)
chr2 (182-273)||(20983280-20983371)
chr2 (131-262)||(29958515-29958646)
chr2 (180-262)||(20103161-20103243)
chr2 (190-258)||(43236509-43236577)
chr2 (163-252)||(19620793-19620882)
chr2 (107-172)||(36755184-36755249)
chr2 (116-177)||(11721371-11721432)
chr2 (107-172)||(37895619-37895684)
chr2 (183-251)||(23206428-23206496)
chr2 (183-251)||(23678032-23678100)
chr2 (190-258)||(43237747-43237815)
chr2 (163-262)||(10446833-10446932)
chr2 (121-172)||(15848179-15848230)
chr2 (126-177)||(17266484-17266535)
chr2 (85-172)||(25893468-25893555)
chr2 (105-172)||(36382252-36382319)
chr2 (105-172)||(39423606-39423673)
chr2 (115-177)||(10840562-10840624)
chr2 (163-249)||(16367247-16367333)
chr2 (194-236)||(21103108-21103150)
chr2 (127-172)||(1696001-1696046)
chr2 (131-172)||(6657969-6658010)
chr2 (185-262)||(9694048-9694125)
chr2 (131-172)||(11163319-11163360)
chr2 (131-172)||(14900748-14900789)
chr2 (131-172)||(16099146-16099187)
chr2 (131-172)||(33739794-33739835)
chr2 (107-172)||(34447904-34447968)
chr2 (131-172)||(39498401-39498442)
chr2 (131-172)||(44714057-44714098)
chr2 (194-262)||(1149938-1150006)
chr2 (129-177)||(17266624-17266672)
chr2 (85-148)||(6573656-6573719)
chr2 (105-172)||(10712814-10712881)
chr2 (163-262)||(20911131-20911230)
chr2 (190-240)||(7981070-7981120)
chr2 (163-249)||(28599441-28599527)
chr2 (107-172)||(2318249-2318314)
chr2 (127-172)||(6573137-6573182)
chr2 (107-180)||(11349477-11349550)
chr2 (116-177)||(11689627-11689688)
chr2 (131-172)||(13995938-13995979)
chr2 (196-249)||(17580452-17580505)
chr2 (131-172)||(33062315-33062356)
chr2 (183-271)||(33882892-33882981)
chr2 (131-172)||(36479809-36479850)
chr2 (131-172)||(41248824-41248865)
chr2 (190-258)||(7983837-7983905)
chr2 (194-262)||(32519156-32519224)
chr2 (105-173)||(44044204-44044272)
[»] chr5 (65 HSPs)
chr5 (131-262)||(22870430-22870561)
chr5 (131-252)||(22869616-22869737)
chr5 (131-262)||(20856933-20857064)
chr5 (186-262)||(31107932-31108008)
chr5 (163-262)||(14744730-14744829)
chr5 (131-262)||(20857515-20857646)
chr5 (123-258)||(36476770-36476905)
chr5 (163-262)||(21978971-21979070)
chr5 (143-258)||(36477356-36477471)
chr5 (182-262)||(20072888-20072968)
chr5 (182-262)||(39181058-39181138)
chr5 (131-262)||(20072122-20072253)
chr5 (182-258)||(16532898-16532974)
chr5 (182-258)||(21978036-21978112)
chr5 (185-262)||(8654108-8654185)
chr5 (182-267)||(39181815-39181900)
chr5 (182-258)||(8673777-8673853)
chr5 (182-262)||(16533644-16533724)
chr5 (163-225)||(39402148-39402210)
chr5 (105-177)||(14848976-14849049)
chr5 (105-172)||(13962955-13963022)
chr5 (105-172)||(19892578-19892645)
chr5 (121-172)||(35512239-35512290)
chr5 (105-172)||(38442159-38442226)
chr5 (184-249)||(21972104-21972168)
chr5 (107-172)||(29646634-29646699)
chr5 (163-260)||(31108338-31108434)
chr5 (107-172)||(32242333-32242398)
chr5 (128-172)||(8322495-8322539)
chr5 (163-263)||(25253086-25253186)
chr5 (163-263)||(25316876-25316976)
chr5 (128-172)||(35920477-35920521)
chr5 (121-172)||(5024304-5024355)
chr5 (105-172)||(11047528-11047595)
chr5 (105-172)||(13362498-13362565)
chr5 (163-262)||(14745449-14745548)
chr5 (163-262)||(37944995-37945094)
chr5 (105-172)||(39453391-39453458)
chr5 (163-249)||(21260879-21260965)
chr5 (126-172)||(38475290-38475336)
chr5 (131-172)||(297279-297320)
chr5 (131-172)||(3529138-3529179)
chr5 (131-172)||(5993980-5994021)
chr5 (131-172)||(6758130-6758171)
chr5 (131-172)||(14194719-14194760)
chr5 (131-172)||(28269684-28269725)
chr5 (131-172)||(28771134-28771175)
chr5 (131-172)||(31482667-31482708)
chr5 (131-172)||(41930607-41930648)
chr5 (121-177)||(12904840-12904896)
chr5 (194-234)||(33735342-33735382)
chr5 (105-172)||(10684030-10684097)
chr5 (163-262)||(32052508-32052607)
chr5 (163-262)||(33735597-33735696)
chr5 (134-172)||(6150545-6150583)
chr5 (196-262)||(7015509-7015575)
chr5 (122-172)||(24547412-24547462)
chr5 (199-249)||(31118969-31119019)
chr5 (131-172)||(1506058-1506099)
chr5 (131-172)||(27587239-27587280)
chr5 (132-172)||(186510-186550)
chr5 (183-263)||(18934713-18934793)
chr5 (233-276)||(19892294-19892338)
chr5 (194-262)||(25253401-25253469)
chr5 (194-262)||(25317192-25317260)
[»] chr3 (57 HSPs)
chr3 (127-262)||(29192957-29193092)
chr3 (131-262)||(32717073-32717204)
chr3 (131-258)||(29192040-29192167)
chr3 (182-267)||(45279303-45279388)
chr3 (182-262)||(48189118-48189198)
chr3 (143-258)||(37249204-37249319)
chr3 (182-249)||(44476063-44476130)
chr3 (182-267)||(11026651-11026736)
chr3 (131-262)||(2943914-2944045)
chr3 (182-262)||(2944685-2944765)
chr3 (182-262)||(22736709-22736789)
chr3 (182-249)||(1756564-1756631)
chr3 (182-249)||(48188392-48188459)
chr3 (182-262)||(1757323-1757403)
chr3 (182-258)||(37249817-37249892)
chr3 (182-246)||(43105250-43105314)
chr3 (182-258)||(43105853-43105929)
chr3 (182-258)||(44481972-44482048)
chr3 (182-258)||(45278549-45278625)
chr3 (131-237)||(11025963-11026069)
chr3 (105-172)||(33156264-33156331)
chr3 (107-172)||(23458251-23458316)
chr3 (105-172)||(9294228-9294295)
chr3 (121-172)||(26463884-26463935)
chr3 (105-172)||(33689649-33689716)
chr3 (105-172)||(43384374-43384441)
chr3 (131-172)||(19741188-19741229)
chr3 (147-228)||(32716284-32716365)
chr3 (121-177)||(41988048-41988104)
chr3 (105-172)||(40758235-40758302)
chr3 (196-262)||(11312929-11312995)
chr3 (196-262)||(21300327-21300393)
chr3 (126-172)||(40033747-40033793)
chr3 (122-172)||(51994173-51994223)
chr3 (196-262)||(53037151-53037217)
chr3 (131-172)||(2796270-2796311)
chr3 (131-172)||(8041707-8041748)
chr3 (131-172)||(10770756-10770797)
chr3 (34-79)||(21783621-21783666)
chr3 (131-172)||(36314563-36314604)
chr3 (131-172)||(48322642-48322683)
chr3 (131-172)||(54466514-54466555)
chr3 (128-172)||(40506080-40506124)
chr3 (161-249)||(55036683-55036771)
chr3 (163-262)||(1741388-1741487)
chr3 (105-172)||(25108365-25108432)
chr3 (122-177)||(44654790-44654845)
chr3 (106-172)||(25107304-25107370)
chr3 (163-240)||(10998157-10998234)
chr3 (116-177)||(20704608-20704669)
chr3 (182-219)||(22735403-22735440)
chr3 (131-172)||(46474906-46474947)
chr3 (185-234)||(46670561-46670610)
chr3 (121-177)||(39399378-39399434)
chr3 (194-262)||(53037028-53037096)
chr3 (121-177)||(54317917-54317973)
chr3 (132-172)||(55052545-55052585)
[»] chr6 (39 HSPs)
chr6 (163-262)||(33401126-33401225)
chr6 (123-262)||(4117507-4117646)
chr6 (131-262)||(14656481-14656612)
chr6 (163-262)||(17784385-17784484)
chr6 (125-262)||(4116800-4116937)
chr6 (182-257)||(8427384-8427459)
chr6 (182-267)||(33399962-33400047)
chr6 (186-249)||(1661453-1661516)
chr6 (182-262)||(14657228-14657308)
chr6 (182-262)||(8427201-8427281)
chr6 (163-263)||(23291744-23291844)
chr6 (163-262)||(13480209-13480308)
chr6 (163-262)||(13480492-13480591)
chr6 (105-172)||(21627983-21628050)
chr6 (105-172)||(30803952-30804019)
chr6 (105-172)||(33517625-33517692)
chr6 (105-172)||(33647054-33647121)
chr6 (131-172)||(12080727-12080768)
chr6 (131-172)||(28000650-28000691)
chr6 (131-172)||(30337540-30337581)
chr6 (105-173)||(679956-680024)
chr6 (163-227)||(5064371-5064435)
chr6 (105-172)||(30725850-30725917)
chr6 (163-249)||(32337578-32337664)
chr6 (131-172)||(363095-363136)
chr6 (116-177)||(1215147-1215208)
chr6 (131-172)||(3059348-3059389)
chr6 (194-263)||(3299874-3299943)
chr6 (163-240)||(5064619-5064696)
chr6 (131-172)||(14196880-14196921)
chr6 (131-172)||(17734459-17734500)
chr6 (194-267)||(23292059-23292132)
chr6 (105-173)||(680998-681066)
chr6 (194-262)||(15819805-15819873)
chr6 (194-262)||(16704624-16704692)
chr6 (163-227)||(20994975-20995039)
chr6 (116-172)||(26463270-26463326)
chr6 (108-172)||(28498298-28498362)
chr6 (108-172)||(29810709-29810773)
[»] chr4 (73 HSPs)
chr4 (131-262)||(23455657-23455788)
chr4 (147-262)||(23454955-23455070)
chr4 (163-262)||(53477080-53477179)
chr4 (182-267)||(54591597-54591682)
chr4 (143-258)||(38982576-38982691)
chr4 (182-262)||(38813555-38813635)
chr4 (182-262)||(38814346-38814426)
chr4 (163-260)||(54590146-54590243)
chr4 (182-262)||(56556583-56556663)
chr4 (182-274)||(56557344-56557436)
chr4 (188-262)||(13336863-13336937)
chr4 (107-177)||(48528558-48528628)
chr4 (182-262)||(52815664-52815744)
chr4 (182-262)||(52816442-52816522)
chr4 (105-173)||(16605692-16605760)
chr4 (182-262)||(55013108-55013187)
chr4 (105-172)||(35028268-35028335)
chr4 (188-258)||(22882352-22882422)
chr4 (188-258)||(22934016-22934086)
chr4 (193-258)||(9254411-9254476)
chr4 (105-172)||(14801827-14801894)
chr4 (163-273)||(12691396-12691506)
chr4 (85-171)||(54435347-54435433)
chr4 (131-172)||(37976449-37976490)
chr4 (127-172)||(50418929-50418974)
chr4 (121-169)||(17356208-17356256)
chr4 (121-177)||(52298112-52298168)
chr4 (105-172)||(15507943-15508010)
chr4 (121-172)||(34765666-34765717)
chr4 (114-177)||(48529855-48529918)
chr4 (131-173)||(4982991-4983033)
chr4 (126-172)||(16005929-16005975)
chr4 (196-262)||(22249927-22249993)
chr4 (188-258)||(22881172-22881242)
chr4 (188-258)||(22932836-22932906)
chr4 (126-172)||(44967329-44967375)
chr4 (107-165)||(53129778-53129836)
chr4 (106-172)||(53701903-53701969)
chr4 (131-172)||(9145031-9145072)
chr4 (131-172)||(13058128-13058169)
chr4 (131-172)||(18831440-18831481)
chr4 (131-172)||(23613400-23613441)
chr4 (131-172)||(27934623-27934664)
chr4 (131-172)||(32950233-32950274)
chr4 (131-172)||(36009109-36009150)
chr4 (131-172)||(37248327-37248368)
chr4 (131-172)||(42738296-42738337)
chr4 (131-172)||(43155792-43155833)
chr4 (131-172)||(49879472-49879513)
chr4 (194-262)||(8287248-8287316)
chr4 (121-173)||(10781770-10781822)
chr4 (121-173)||(24349764-24349816)
chr4 (132-172)||(24711202-24711242)
chr4 (163-263)||(32846362-32846462)
chr4 (194-262)||(53475832-53475900)
chr4 (132-172)||(54086992-54087032)
chr4 (163-262)||(22250017-22250116)
chr4 (163-262)||(53559671-53559770)
chr4 (163-262)||(54961432-54961531)
chr4 (131-172)||(5369038-5369079)
chr4 (131-172)||(9400784-9400825)
chr4 (131-172)||(22566890-22566931)
chr4 (131-172)||(33247538-33247579)
chr4 (131-172)||(34837339-34837380)
chr4 (131-172)||(35508536-35508577)
chr4 (188-249)||(35730970-35731031)
chr4 (131-172)||(38012261-38012302)
chr4 (131-172)||(52909344-52909385)
chr4 (26-78)||(55866333-55866386)
chr4 (194-262)||(19740861-19740929)
chr4 (194-262)||(33294458-33294526)
chr4 (194-262)||(37677849-37677917)
chr4 (128-172)||(51692644-51692688)
[»] scaffold1493 (1 HSPs)
scaffold1493 (163-273)||(582-693)
[»] scaffold0009 (2 HSPs)
scaffold0009 (163-274)||(260990-261101)
scaffold0009 (161-262)||(262439-262540)
[»] scaffold0182 (2 HSPs)
scaffold0182 (186-262)||(14400-14476)
scaffold0182 (182-262)||(13135-13215)
[»] scaffold0018 (1 HSPs)
scaffold0018 (182-262)||(73110-73190)
[»] scaffold0008 (1 HSPs)
scaffold0008 (105-172)||(239821-239888)
[»] scaffold0005 (1 HSPs)
scaffold0005 (105-172)||(37833-37900)
[»] scaffold0031 (1 HSPs)
scaffold0031 (108-172)||(69056-69120)
[»] scaffold0220 (1 HSPs)
scaffold0220 (93-172)||(23322-23401)
[»] scaffold0020 (1 HSPs)
scaffold0020 (131-173)||(139762-139804)
[»] scaffold0559 (1 HSPs)
scaffold0559 (131-172)||(1324-1365)
[»] scaffold0027 (1 HSPs)
scaffold0027 (105-177)||(14060-14132)
[»] scaffold0024 (1 HSPs)
scaffold0024 (131-172)||(141859-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (131-172)||(1860-1901)
[»] scaffold0206 (1 HSPs)
scaffold0206 (163-262)||(10326-10425)
[»] scaffold0295 (1 HSPs)
scaffold0295 (131-172)||(2234-2275)
[»] scaffold0205 (1 HSPs)
scaffold0205 (131-172)||(21234-21275)
[»] scaffold0201 (1 HSPs)
scaffold0201 (163-227)||(14177-14241)


Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 264 - 601
Target Start/End: Complemental strand, 39030485 - 39030120
Alignment:
Q  264 aaaataaaataaaaatacatcacaatttgttttctcatatttttgaccgggtcacattagtttgattatttaggatgttgtcaatcaaccacatatcaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030485 aaaataaaataaaaatacatcacaatttgttttctcatatttttgaccgggtcacattagtttgattatttaggatgttgtcaatcaaccacatatcaac 39030386  T
Q  364 aattgtgtga------------------acgatagtcggagctgctgatttgtggtagaagattacattgatccaccaaagagggtgatttgcaaacaat 445  Q
    ||||||||||                  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39030385 aattgtgtgatttagagaagacttgtgaacgatagtcggagctgctgatttgtggtagaagataacattgatccaccaaagagggtgatttgcaaacaat 39030286  T
Q  446 gattcaatcattcaagtaactgagagttcatgagaattaa----------aaggttcaaccgaacgagatagtgtatctttatacgaagaatattgtata 535  Q
    || |||||||||||||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030285 gactcaatcattcaagtaattgagagttcatgagaattaatgagaattaaaaggttcaaccgaacgagatagtgtatctttatacgaagaatattgtata 39030186  T
Q  536 aataaataaggcatttgttacaaatgtggtgcaaattagtgatcaggatatgaagaatatcacagg 601  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39030185 aataaataaggcatttgttacaaatttggtgcaaattagtgatcaggatatgaagaatatcacagg 39030120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 38599064 - 38598965
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38599064 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagc 38598965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 25288076 - 25288187
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaag- 261  Q
    ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||     
T  25288076 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaagc 25288175  T
Q  262 ctaaaataaaat 273  Q
    ||||||||||||    
T  25288176 ctaaaataaaat 25288187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 34213896 - 34213765
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  34213896 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacggcc 34213797  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||| |||||||| || |||||||||    
T  34213796 tataattgcagggatgaaaagcatatttaagc 34213765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 1231626 - 1231526
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||| | ||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||||| | ||||||||||| |||||||||    
T  1231626 aaatgattaatttttacaggggtaaaatgggaggattagtaagctcatggatgaaaaatcaaagggcctataattgtagggatgaaatgcatatttaagc 1231527  T
Q  263 t 263  Q
    |    
T  1231526 t 1231526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 7393168 - 7393244
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||    
T  7393168 aaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgtctatttaagc 7393244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 1232799 - 1232896
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||| | |||||||||||||||||    ||| ||||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  1232799 aaatgattaatttttacaggggcaaaatgggaggatac--aagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 1232896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 34665851 - 34665771
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||||    
T  34665851 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 34665771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 33497635 - 33497715
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| || |||||||| || |||||||||    
T  33497635 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctataattacagggatgaaaagcatatttaagc 33497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 262
Target Start/End: Original strand, 34214488 - 34214628
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcaggga-tgaaaaat 221  Q
    ||||||| |||||||||   ||| |||| |||||| | | ||||||||| |  ||| | ||||||||||| |||||||||||||||||||| ||||||||    
T  34214488 tgatgtggcagtgattattcgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggattgaaaaat 34214587  T
Q  222 caaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||| ||||||||||| || |||||||| || |||||||||    
T  34214588 caaacggcctataattacagggatgaaaagcatatttaagc 34214628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 4463455 - 4463525
Alignment:
Q  192 ggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||| |||||||||    
T  4463455 ggaggattagtaagttcagggatgaaatttcaaatggcctatacttgcagggatgaaatgcatatttaagc 4463525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 34666559 - 34666614
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataatt 237  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34666559 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataatt 34666614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 4970206 - 4970130
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||| ||  |||||||| ||||||||||| |||||    
T  4970206 gggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaatgcatattt 4970130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 24377258 - 24377186
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||  |||||||||| ||||||||| |||||    
T  24377258 aaaatgggaggattagtaagttcagggatgaaacttcaaatgacccctaattgcaagaatgaaatgcatattt 24377186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 24379015 - 24379085
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgc 252  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||| ||  |||||||| |||||||||||    
T  24379015 gggcaaaataggaggattagtaagttcaaggatgaaatatcaaatgacccctaattgcagggatgaaatgc 24379085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 29574819 - 29574747
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||| |||||||||||||| ||||||||||  ||||||| |||||| ||||| ||||||||||| |||||    
T  29574819 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 29574747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 16388796 - 16388863
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  16388796 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16388863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 27437539 - 27437618
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||  | ||||||||| |||||||| ||||| ||||| |||||||| ||||| ||||||||||| |||||||||    
T  27437539 ggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatgaaatgcatatttaagc 27437618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 33497097 - 33497042
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataatt 237  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||| |||||||||    
T  33497097 gggcaaaatggaaggattagtaagttcaagaatgaaaaatcaaatgacctataatt 33497042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 29575910 - 29575980
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||| || ||||||||||  |||||||| ||||| ||||| ||||||||||| |||||    
T  29575910 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatattt 29575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 23698536 - 23698581
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  23698536 gtgacagtgattaagtggggagagggacgaaattttaaatgattaa 23698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 36928632 - 36928567
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  36928632 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 2693787 - 2693859
Alignment:
Q  106 ccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||| |||||| ||||| |||||||||||||||||||| |||| || |||| |||||||||||| ||||    
T  2693787 ccacgtcatctaatctagtgacgtgacagtgattaagtggggggagtaaccaaattttaaatgattaaatttt 2693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 30711987 - 30712055
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  30711987 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 30719764 - 30719832
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  30719764 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30719832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 36574890 - 36574822
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||  ||||  |||||||||| |||||    
T  36574890 tgggaggattagtaagttcagggatgaaatttcaaatgccctatatatgcagagatgaaatgcatattt 36574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 4405946 - 4405997
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  4405946 agtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaa 4405997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 186 - 221
Target Start/End: Complemental strand, 7392285 - 7392250
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaat 221  Q
    ||||||||||||||||||||||||||||||||||||    
T  7392285 aaaatgggaggattagtaagttcagggatgaaaaat 7392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 9632406 - 9632347
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaagga 244  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||| |||||| |||||||||    
T  9632406 caaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaagga 9632347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 12199210 - 12199257
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  12199210 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12199257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 12443638 - 12443685
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  12443638 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12443685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 13186202 - 13186151
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13186202 agtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 13186151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 27436643 - 27436564
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||  | ||||||||| |||||||| ||||| ||||| | |||||| ||||| ||||||||||| |||||||||    
T  27436643 ggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacgacctatatttgcagggatgaaatgcatatttaagc 27436564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 35756740 - 35756673
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  35756740 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 35756673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 31608799 - 31608849
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 171  Q
    ||||| ||| |||||||||||||||||||| |||||||| |||||||||||    
T  31608799 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgatta 31608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 37343042 - 37342976
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||  | |||||||||    
T  37343042 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 37342976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 38862755 - 38862709
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38862755 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 43866835 - 43866901
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||  | |||||||||    
T  43866835 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 43866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 1425318 - 1425359
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1425318 cagtgattaagtggggagagggacgaaattttaaatgattaa 1425359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 3041721 - 3041762
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  3041721 cagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 20096325 - 20096394
Alignment:
Q  180 atgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||    
T  20096325 atgggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 20096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 23663810 - 23663851
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  23663810 cagtgattaagtggggagagggacgaaattttaaatgattaa 23663851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 36186339 - 36186404
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||| ||||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  36186339 cacgtcatcaaattagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaa 36186404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 36325366 - 36325325
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36325366 cagtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 36623613 - 36623560
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||    
T  36623613 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 36623560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 38845564 - 38845605
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  38845564 cagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 39071808 - 39071767
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  39071808 cagtgattaagtggggagagggacgaaattttaaatgattaa 39071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 40775915 - 40775956
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  40775915 cagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 44407122 - 44407163
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44407122 cagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 20385726 - 20385658
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  20385726 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaat 20385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 20386700 - 20386768
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| ||||  |||| ||||   || |||||||| |||||||||||||    
T  20386700 gccacgtcagctaatcagtgatgtggcagtagttaactgggctcagggacgaaattttaaatgattaat 20386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 30711013 - 30710945
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||| ||||||||||| |||||||| ||||| ||||   || |||||||| |||||||||||||    
T  30711013 gccacgtcaactaatcagtgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaat 30710945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 36623421 - 36623353
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  36623421 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaagc 36623353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 38600265 - 38600333
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||  ||||||| |||||| ||||| ||| ||||||| |||||||||    
T  38600265 aggattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacgaaatgcctatttaagc 38600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 40422475 - 40422543
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||||||||  | |||||||||    
T  40422475 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 40422543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 7677 - 7776
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||| ||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  7677 aaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 7776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 22890275 - 22890330
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 171  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| |||| ||||||    
T  22890275 taattagtgatgtgacagtgattaagtgggaagagggacaaaattttaagtgatta 22890330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 36576029 - 36576088
Alignment:
Q  191 gggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaat 250  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||| || || |||||||||    
T  36576029 gggaggattggtaagttcagggatgaaatttcaaatggcttatatttacagggatgaaat 36576088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 36623637 - 36623736
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  36623637 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 36623736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 43866811 - 43866712
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  43866811 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 43866712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 547695 - 547629
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||| ||| ||||| ||||||| |||||||||||| ||||||||  | |||||||||    
T  547695 gattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctatttaagc 547629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 27857026 - 27857112
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||    
T  27857026 aaatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 27857112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 2266624 - 2266583
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  2266624 cagtgattaagtggggagagggacgaaattttaaacgattaa 2266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 8316884 - 8316925
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  8316884 cagtgattaagtggggagatggacgaaattttaaatgattaa 8316925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 12273149 - 12273190
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| |||| |||||||| ||||||||||||    
T  12273149 cagtgattaagtgggaagagggacgaaattttaaatgattaa 12273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 22915654 - 22915695
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  22915654 cagtgattaagtggggagagggacggaattttaaatgattaa 22915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 23424796 - 23424873
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| |||||||||||||| |||||    
T  23424796 aaatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgca 23424873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 24085921 - 24085860
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||| ||||  |||||| ||||    
T  24085921 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaatttt 24085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 35449874 - 35449915
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  35449874 cagtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 31873169 - 31873241
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||| | ||| ||||||||  ||||||||||||||| ||||  || |||| |||||||||||| ||||    
T  31873169 gccacgtcatcaaattagtgatgtagcagtgattaagtgggaagaggaacaaaattttaaatgattaaatttt 31873241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 196; Significance: 1e-106; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 261
Target Start/End: Original strand, 14440 - 14691
Alignment:
Q  11 ccagagaagtgaagt-agtgaaggagggaagattttgagaagatgaacacagaggtataatggtcttttcgcaactcatttaaccaataaacagagccac 109  Q
    ||||||||||||||| |  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14440 ccagagaagtgaagtgaaggaaggagggaagattttgagaagatggacacaggggtataatggtcttttcgcaactcatttaaccaataaacagagccac 14539  T
Q  110 gtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttca 209  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  14540 gtcagctaatcagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgggaggattagtaagctca 14639  T
Q  210 gggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaag 261  Q
    ||||||||||||||||||||||||||||| | | ||||||||| ||||||||    
T  14640 gggatgaaaaatcaaatggcctataattgaaggaatgaaatgcatatttaag 14691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 132 - 262
Target Start/End: Complemental strand, 13740 - 13610
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcct 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  13740 agtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcct 13641  T
Q  232 ataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| ||||||||||| |||||||||    
T  13640 ataattgcagggatgaaatgcatatttaagc 13610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 5e-67; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 25065858 - 25066055
Alignment:
Q  63 ggtataatggtcttttcgcaactcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatctt 162  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  25065858 ggtataatggttttttcgcaactcatttaacaaataaatagagccacgtcagctaatcagtgaggtggcagtgattaagtggagagagggacgaaatctt 25065957  T
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaa 260  Q
    |||||||||||||||| | ||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||| |||||||    
T  25065958 aaatgattaatttttacaggggtaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcttataattatagggatgaaatgcatatttaa 25066055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 121 - 260
Target Start/End: Complemental strand, 25065075 - 25064936
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaa 220  Q
    ||||| ||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| ||||||||||||||    
T  25065075 agtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaatttttatagggacagaatgggaggattagtaagatcagggatgaaaaa 25064976  T
Q  221 tcaaatggcctataattgcaaggatgaaatgcgtatttaa 260  Q
    ||||||  |||||||||||| ||||||||||| |||||||    
T  25064975 tcaaattacctataattgcagggatgaaatgcatatttaa 25064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 13295267 - 13295136
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| ||||| || |||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||||||||||||| ||    
T  13295267 cagtgattaaccgggaagagggacgacattttaaatgattaatttttacaagggcaaaatggaaggattagtaagctcaggggtgaaaaatcaaatgacc 13295168  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || || |||||||| |||||||||    
T  13295167 tataattacaggggtgaaatgcatatttaagc 13295136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 123 - 258
Target Start/End: Original strand, 46282753 - 46282888
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| |||||||||   ||| |||| |||||| | | ||||||||| |  ||| | ||||||||||| |||||||||||||||||||||||||||||    
T  46282753 tgatgtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatc 46282852  T
Q  223 aaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||| ||||||||||| || |||||||| || |||||    
T  46282853 aaacggcctataattacagggatgaaaagcatattt 46282888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 49093141 - 49093042
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |  ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || | |||||||    
T  49093141 aaatgattagtaattacatgggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatgtttaagc 49093042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 32619465 - 32619389
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || |||||||| || |||||    
T  32619465 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 32619389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 2828293 - 2828194
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  |  |||||||| | |||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  2828293 aaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatgatctataattgcaaggatgaaatgcatatttaagc 2828194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 32238779 - 32238704
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||| ||||||||||| |||||    
T  32238779 ggcaaaatgggaggattagtaagttcagggatgaaatttcaaatagcctatatttgcagggatgaaatgcatattt 32238704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 32622375 - 32622442
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || ||||||||    
T  32622375 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaa 32622442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 50062968 - 50063043
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||    
T  50062968 ggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 50063043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 51935218 - 51935303
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| || |||||||| || ||||||||| ||||    
T  51935218 gggcaaaatgggaggattagaaagctcagggatgaaaaatcaaatgacatataattacatggatgaaaagcatatttaagccaaaa 51935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 34850335 - 34850407
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||| ||||    
T  34850335 gccacgtcagctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaatttt 34850407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 46282152 - 46282072
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| || ||||||||  | |||||||||    
T  46282152 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaaacatatttaagc 46282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 13295608 - 13295679
Alignment:
Q  191 gggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  13295608 gggagggttagtaagctcagagatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 13295679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 6345630 - 6345732
Alignment:
Q  156 aaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgta 255  Q
    |||| ||||||| ||||| |||  | ||||||||||| |||||||||||||||||||||||||  ||||||| ||  |||||||| ||||||||||| ||    
T  6345630 aaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaatgcata 6345729  T
Q  256 ttt 258  Q
    |||    
T  6345730 ttt 6345732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 25065797 - 25065846
Alignment:
Q  26 agtgaaggagggaagattttgagaagatgaacacagaggtataatggtct 75  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25065797 agtgaaggagggaagattttgagaagatgaacacaggggtataatggtct 25065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 37578462 - 37578530
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  37578462 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaat 37578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 24009811 - 24009878
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  24009811 gccacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24009878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 6344336 - 6344260
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||| ||  ||||| || ||||||||||| |||||    
T  6344336 gggcaaaatgggaggattagtaagttcatggatgaaatttcaaatgacccctaattacagggatgaaatgcatattt 6344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 14879129 - 14879062
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  14879129 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 14879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 24701573 - 24701652
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||| ||||||||||| |||||||| ||||| ||||||||| |||| ||||| ||||||||  | |||||||||    
T  24701573 ggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaagc 24701652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 32917402 - 32917351
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32917402 agtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 49093832 - 49093875
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  49093832 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 49093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 29042879 - 29042945
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||  | |||||||||    
T  29042879 gattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagc 29042945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1841591 - 1841550
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  1841591 cagtgattaagtggggagagtgacgaaattttaaatgattaa 1841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 6367718 - 6367653
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  6367718 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 1103596 - 1103552
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  1103596 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 1103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 2829539 - 2829645
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaa-------atcaaatggcctataattgcaaggatgaaatgcgta 255  Q
    ||||||||||| |||  | ||| |||||||||||||||||||| ||| |||||||||       |||||||| |||||||||| | ||||||||||| ||    
T  2829539 aaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaaatcaaatatcaaatgacctataattgtagggatgaaatgcata 2829638  T
Q  256 tttaagc 262  Q
    |||||||    
T  2829639 tttaagc 2829645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 5183790 - 5183894
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| |||||| |||| |||||||| ||||| |||||||||||||| ||||| |||  |||  |||||||||||    
T  5183790 aaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatatttgcagggacaaaagacgtatttaagc 5183889  T
Q  263 taaaa 267  Q
     ||||    
T  5183890 caaaa 5183894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 4960698 - 4960631
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  4960698 gccacgtcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 4960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 10019657 - 10019728
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||||||||| ||||||| ||||||    
T  10019657 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctata 10019728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 10304060 - 10304009
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304060 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaaatttt 10304009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10304146 - 10304197
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304146 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 10304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 34849160 - 34849097
Alignment:
Q  114 gctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||| |||| ||| ||||||||||| |||||||| |||||||| |||||||||||| ||||    
T  34849160 gctaatcggtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaatttt 34849097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 40210656 - 40210707
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  40210656 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40210707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 46163188 - 46163121
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||| ||||||||||||||| |||||||| ||||||||||||    
T  46163188 gccacgtcatcaaattagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaa 46163121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 48691293 - 48691242
Alignment:
Q  118 atcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgat 169  Q
    |||||||| ||| |||||||||||||||||||||||| |||| |||||||||    
T  48691293 atcagtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgat 48691242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 29043070 - 29043152
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaataaaataaa 276  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||  || ||||  | ||||||||| || ||||||||||    
T  29043070 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaagccaagataaaataaa 29043152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 31514582 - 31514624
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  31514582 cagtgattaagtggggagagggacgaaattttaaatgattaat 31514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 183487 - 183528
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  183487 cagtgattaagtggggagagggacgaaattttaaatgattaa 183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 4716733 - 4716774
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  4716733 cagtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 9443731 - 9443658
Alignment:
Q  105 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||||||| |||||  ||||| ||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  9443731 gccacgtcagctaatctagtgacttgacaatgattaagtggggggagggaccaaattttaaatgattaaatttt 9443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 13245997 - 13245936
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||| |||| ||||||| ||||    
T  13245997 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaatttt 13245936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 13914339 - 13914404
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  13914339 cacgtcatcaaattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaa 13914404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 24905432 - 24905473
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  24905432 cagtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 25648016 - 25647975
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  25648016 cagtgattaagtggggagagggacgaaattttaaatgattaa 25647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 27999121 - 27999206
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaat 190  Q
    ||||| ||||| ||| ||||| ||| ||||||||||||||| |||| |||||||| | |||||||||| |||| ||  ||||||||    
T  27999121 gccacatcagcaaattagtgaggtggcagtgattaagtgggaagagagacgaaatttaaaatgattaaattttgtagtggcaaaat 27999206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 28011495 - 28011454
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28011495 cagtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33442859 - 33442900
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  33442859 cagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36694544 - 36694585
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36694544 cagtgattaagtggggagagagacgaaattttaaatgattaa 36694585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36710645 - 36710686
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36710645 cagtgattaagtggggagagagacgaaattttaaatgattaa 36710686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 42248605 - 42248564
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42248605 cagtgattaagtggggagagggacgaaattttaaatgattaa 42248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 42267434 - 42267389
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  42267434 agtgattaagtggggagagagacgaaatattaaatgattaaatttt 42267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 5926837 - 5926909
Alignment:
Q  195 ggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    |||||||||| |||||||||||||| |||||||| ||||| ||||| ||| ||||  | ||||||||| ||||    
T  5926837 ggattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagccaaaa 5926909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 16970834 - 16970878
Alignment:
Q  134 tgattaagtggggagagtgacgaaatcttaaatgattaattttta 178  Q
    ||||||||||||||||| |||||||| |||||||||||| |||||    
T  16970834 tgattaagtggggagagggacgaaattttaaatgattaaatttta 16970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 28534820 - 28534868
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||    
T  28534820 aaaatggaaggattagtaagttcagggatgaaatttcaaatgccctata 28534868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 29980922 - 29981022
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| ||| |||| ||||| ||||||| |||||| |||||| || ||||  | |||||||||    
T  29980922 aaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgcaaagacgaaagacctatttaagc 29981021  T
Q  263 t 263  Q
    |    
T  29981022 t 29981022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 50062282 - 50062246
Alignment:
Q  184 gcaaaatgggaggattagtaagttcagggatgaaaaa 220  Q
    ||||||||| |||||||||||||||||||||||||||    
T  50062282 gcaaaatggaaggattagtaagttcagggatgaaaaa 50062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 1040398 - 1040299
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||  |||| ||||||||| |||| ||||||||| ||||  | |||||||||    
T  1040398 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagc 1040299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 1047304 - 1047205
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||  |||| ||||||||| |||| ||||||||| ||||  | |||||||||    
T  1047304 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagc 1047205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 2953748 - 2953847
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  2953748 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 2953847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 17662136 - 17662187
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  17662136 agtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 17662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 19755689 - 19755788
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||| |||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  19755689 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 19755788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 40772637 - 40772598
Alignment:
Q  133 gtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  40772637 gtgattaagtggggagagggacgaaattttaaatgattaa 40772598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 41098891 - 41098824
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||||||  ||||||||||||||||| | ||| |||| ||||||||||||    
T  41098891 gccacgtcatcaaattagtgatgtggtagtgattaagtggggagggggacaaaattttaaatgattaa 41098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 43758980 - 43758913
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||| ||||| |||||||| ||||||||||||    
T  43758980 gccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 43758913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 44523406 - 44523473
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| ||||| ||| |||||||||||||  | ||| || ||||| ||||||||||||    
T  44523406 gccacgtcagctaattagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaa 44523473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 46849942 - 46850041
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| ||||| ||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  46849942 aaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 46850041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 52563731 - 52563656
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||||||||  ||| ||||||||   |||||  |||||| ||||| ||||||||||| |||||    
T  52563731 ggcaaaatgggaggattagtaacctcaaggatgaaattccaaataccctatatttgcagggatgaaatgcatattt 52563656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 5926619 - 5926533
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||    
T  5926619 aaatgattaatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 5926533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 36381451 - 36381509
Alignment:
Q  192 ggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaat 250  Q
    |||||||||||||||||| |||| |||  |||||| ||||||| ||||| |||||||||    
T  36381451 ggaggattagtaagttcaaggataaaatttcaaatagcctatatttgcagggatgaaat 36381509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 46849918 - 46849852
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||| ||||| ||||||| | |||| ||||||||||||||  | |||||||||    
T  46849918 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggatgaaagacctatttaagc 46849852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 19017901 - 19017966
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||| | ||||||||||||||| |||| ||| |||| ||||||||||||    
T  19017901 cacgtcatcaaattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaa 19017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 19515951 - 19515910
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| |||||| |||||    
T  19515951 cagtgattaagtggggagagggacgaaattttaaataattaa 19515910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 21444741 - 21444680
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| |||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  21444741 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 21444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 22103787 - 22103848
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| |||||||||||||| ||||| |||||||| |||| ||||||| ||||    
T  22103787 taattagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaatttt 22103848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 26024555 - 26024514
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||| | ||||||||||||    
T  26024555 cagtgattaagtggggagagggacgaacttttaaatgattaa 26024514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 30711459 - 30711418
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  30711459 cagtgattaagtggggcgagggacgaaattttaaatgattaa 30711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 34464745 - 34464786
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  34464745 cagtgattaagtggggagagggacaaaattttaaatgattaa 34464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 35152475 - 35152434
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  35152475 cagtgattaagtggggagagggacaaaattttaaatgattaa 35152434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 47999388 - 47999429
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||||| || ||||||||||||    
T  47999388 cagtgattaagtggggagagggacgatattttaaatgattaa 47999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 52134200 - 52134159
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  52134200 cagtgattaagtggggagagggacgaaattttaaacgattaa 52134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 26953170 - 26953102
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| |||||| | ||||| ||||||||| ||||  | |||||||||    
T  26953170 aggattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaaagacatatttaagc 26953102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 35152613 - 35152681
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||| | ||| |||||||||||||||||||||| ||   |  |||||||| |||||||||||||    
T  35152613 gccacgtcatcgaattagtgatgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaat 35152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 262
Target Start/End: Complemental strand, 38643692 - 38643551
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaa 220  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||| ||||||||||    
T  38643692 agtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaatttttacaggagcaaaatgggaggattagtaaggtcaaggatgaaaaa 38643593  T
Q  221 tcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  38643592 tcaaatggcctataattgcagggatgaaatgcatatttaagc 38643551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 63 - 262
Target Start/End: Original strand, 38644571 - 38644759
Alignment:
Q  63 ggtataatggtcttttcgcaactcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatctt 162  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||           |||||||||||||||| || ||||||||    
T  38644571 ggtataatggtctttttgcaactcatttaaccattaaacagagtcacgtcagctaatcagt-----------gattaagtggggagagggatgaaatctt 38644659  T
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||| | || |||||||| ||||||| |||| | |||||| |||||||||||| |||||||||||||| ||||||||| |||||||||    
T  38644660 aaatgattaatttttacaaggtcaaaatggaaggattaataagcttagggataaaaaatcaaatgacctataattgcaagaatgaaatgcatatttaagc 38644759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 45915750 - 45915907
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaa 204  Q
    ||||||||||||||||||||| ||| ||||||||||  ||  |||| |||| ||| |||||||||||||||||| | ||| ||||| |||||||||||||    
T  45915750 gccacgtcagctaatcagtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaatttttacaggggtaaaataggaggattagtaa 45915849  T
Q  205 gttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    | | ||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  45915850 gcttagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 45915907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 123 - 262
Target Start/End: Original strand, 4227132 - 4227271
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| ||||||||||  ||  |||| |||||||| ||||||| |||||||||| | || ||||||||||||||||||||| ||| ||||||||||||    
T  4227132 tgatgtggcagtgattaaccggaaagagggacgaaattttaaatggttaatttttacagggacaaaatgggaggattagtaagctcaaggatgaaaaatc 4227231  T
Q  223 aaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||||||| || ||||||||||| |||||||||    
T  4227232 aaatggcctataattacagggatgaaatgcatatttaagc 4227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 131 - 274
Target Start/End: Original strand, 12644101 - 12644244
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | | | |||||||||||||||||||| ||||||||||||||||||||||||    
T  12644101 cagtgattaaccgggaagagggacgaaattttaaatgattaatttttacaggagtaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 12644200  T
Q  231 tataattgcaaggatgaaatgcgtatttaagctaaaataaaata 274  Q
    | |||||  | ||||||||||| |||||||||| ||| ||||||    
T  12644201 tgtaattatagggatgaaatgcatatttaagcttaaaaaaaata 12644244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 12643232 - 12643101
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| ||||||| |||||||||  | ||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  12643232 cagtgattaatcgggaagagggacgaaattttaaatggttaatttttgcaggggtaaaatgggaggattagtaagctcagagatgaaaaatcaaatggcc 12643133  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || ||||||||||| |||||||||    
T  12643132 tataattacagggatgaaatgcatatttaagc 12643101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 47558166 - 47558031
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 226  Q
    ||||||||||||||  ||| |||| |||||||| ||||||| |||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  47558166 gtgacagtgattaatcgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaaactcagggatgaaaaatcaaat 47558067  T
Q  227 ggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
     ||||||||||  |  |||||||||| |||||||||    
T  47558066 agcctataattaaagagatgaaatgcatatttaagc 47558031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 4226257 - 4226126
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||  |||||||| |||||||||||||||||| | ||||||||||| |||||||||||| ||| || |||| ||||||||||||    
T  4226257 cagtgattaaccgggaagaaggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagctcatggttgaagaatcaaatggcc 4226158  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || ||||||||||| |||||||||    
T  4226157 tataattacagggatgaaatgcatatttaagc 4226126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 7158331 - 7158232
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  7158331 aaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctataattgtagggatgaaatgcatatttaagc 7158232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 12929387 - 12929288
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||    
T  12929387 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatagcctatatttgcagggatgaaatgcatatttaagc 12929288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 12930872 - 12930773
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  12930872 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaagc 12930773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 45914656 - 45914527
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  45914656 cagtgattaatcgggaagagggacgaaattttaaatgattaatttttaca-gggcaaaatgagag-attagtaagcttagggatgaaaaatcaaatggcc 45914559  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| ||  |||||||||| |||||||||    
T  45914558 tataattacagagatgaaatgcatatttaagc 45914527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 37284190 - 37284110
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| || |||||||||    
T  37284190 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagc 37284110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 37289329 - 37289409
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| || |||||||||    
T  37289329 gggcaaaatgggaggattagtaagctcagggatgaaaaaccaaatggcctataattacagggatgaaaagcatatttaagc 37289409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 27480119 - 27479988
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | ||||||||| |||||||||||||| ||||||||||||||||||  ||||    
T  27480119 cagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaagcggcc 27480020  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||| |||||||| || |||||||||    
T  27480019 tataattgcagggatgaaaagcatatttaagc 27479988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 22661438 - 22661362
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| || |||||||| || |||||    
T  22661438 gggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 22661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 43123451 - 43123398
Alignment:
Q  26 agtgaaggagggaagattttgagaagatgaacacagaggtataatggtcttttc 79  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  43123451 agtgaaggagggaagattttaagaagatgaacacatgggtataatggtcttttc 43123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 27480766 - 27480846
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||| ||||||||||| || ||||||||  | |||||||||    
T  27480766 gggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaagc 27480846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 31695637 - 31695709
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||| |||||||||||||| ||||||||||  ||||||| |||||| ||||| ||||||||||| |||||    
T  31695637 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 31695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 2640448 - 2640515
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  2640448 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 2640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 5457177 - 5457244
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||| ||| |||||||||| ||||  ||| |||||||| ||||||||||||    
T  5457177 gccacgtcagctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 5457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 32053429 - 32053480
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  32053429 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 32053480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 31694546 - 31694476
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||| || ||||||||||  |||||||| ||||| ||||| ||||||||||| |||||    
T  31694546 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatattt 31694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 23181264 - 23181331
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  23181264 gccacgtcatcaaattagtgacatgacagtgattaagtggagagagggacgaaattttaaatgattaa 23181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 24388977 - 24388910
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | |||  |||||||| |||||||||||||||||||| |||||||| |||| |||||||    
T  24388977 gccacgtcatcaaattggtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaa 24388910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 28469278 - 28469345
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||||||    
T  28469278 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 28469345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 40379927 - 40379860
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| || ||||||||||||||||| |||||||| ||||||||||||    
T  40379927 gccacgtcatcaaattagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaa 40379860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 43937994 - 43937895
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||| || |||||| ||||  | |||||||||    
T  43937994 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagc 43937895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 43938178 - 43938277
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||||| |||| ||||||||| ||||  | |||||||||    
T  43938178 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagc 43938277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 3914294 - 3914229
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||||| |||||||||||| || |||| |||||||| ||||||||||||    
T  3914294 cacgtcatcaaattagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaa 3914229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6571149 - 6571104
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||    
T  6571149 gtgacagtgattaagtggggagagggacaaaattttaaatgattaa 6571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 17102152 - 17102111
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  17102152 cagtgattaagtggggagagggacgaaattttaaatgattaa 17102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 27396891 - 27396932
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27396891 cagtgattaagtggggagagggacgaaattttaaatgattaa 27396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 27991871 - 27991830
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27991871 cagtgattaagtggggagagggacgaaattttaaatgattaa 27991830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 30948425 - 30948466
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  30948425 cagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 32680860 - 32680901
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  32680860 cagtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 42731551 - 42731510
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42731551 cagtgattaagtggggagagggacgaaattttaaatgattaa 42731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 45010900 - 45010941
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  45010900 cagtgattaagtggggagagagacgaaattttaaatgattaa 45010941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 22539252 - 22539308
Alignment:
Q  94 caataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagag 150  Q
    |||| ||||| || |||||||||||| ||||| |||| |||||||||||||||||||    
T  22539252 caatcaacagtgctacgtcagctaataagtgacgtgagagtgattaagtggggagag 22539308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 37563657 - 37563709
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    ||||||| ||| ||||||||||| |||||||| ||||| ||||||||||||||    
T  37563657 gggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctata 37563709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10935952 - 10935885
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||| ||||| |||||||| ||||||||||||    
T  10935952 gccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 10935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 11397531 - 11397464
Alignment:
Q  110 gtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||| ||||| |||||||||||||| ||||  ||| ||| |||| |||||||||||| ||||    
T  11397531 gtcagctaattagtgacgtgacagtgattaattgggatgagagactaaattttaaatgattaaatttt 11397464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 5280586 - 5280636
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaagga 244  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| |||||||||    
T  5280586 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcaagga 5280636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 7159235 - 7159297
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaa 248  Q
    ||||||||||||||||||| |||||| | ||||| |||||||  ||||| ||||| |||||||    
T  7159235 aaaatgggaggattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaa 7159297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 12931022 - 12931108
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  ||||||| | ||| ||||||||||| |||||||| ||||| ||||||| || ||| ||||| ||| ||||    
T  12931022 aaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaa 12931108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 15827981 - 15827915
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  15827981 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 15827915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 37563423 - 37563377
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||    
T  37563423 aggattagtaaattcagggacgaaaattcaaatggcctatatttgca 37563377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 22871573 - 22871614
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22871573 cagtgattaagtggggagagggaagaaattttaaatgattaa 22871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 32299001 - 32299042
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| || |||||||||    
T  32299001 cagtgattaagtggggagagggacgaaattttcaatgattaa 32299042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 34928915 - 34928956
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  34928915 cagtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 37657010 - 37656949
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaat 166  Q
    ||||||||| | ||| ||||| ||| | |||||||||||||||||| |||||||| ||||||    
T  37657010 gccacgtcatcaaattagtgacgtgccggtgattaagtggggagagggacgaaattttaaat 37656949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 39686799 - 39686840
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  39686799 cagtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 40022551 - 40022615
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaat 250  Q
    |||||||| |||||||||||| ||||||||||||  |||||| | ||||| ||||| |||||||||    
T  40022551 caaaatggaaggattagtaagatcagggatgaaatttcaaat-gactatatttgcagggatgaaat 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 45010730 - 45010689
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  45010730 cagtgattaagtggggagatggacgaaattttaaatgattaa 45010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 13311323 - 13311375
Alignment:
Q  125 atgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| |||||||||||| ||||||| |||||||| |||||| ||||| ||||    
T  13311323 atgtggcagtgattaagtcgggagagggacgaaattttaaattattaaatttt 13311375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 123 - 271
Target Start/End: Original strand, 25624393 - 25624541
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| ||||||||||  ||| |||| |||||||| |||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||    
T  25624393 tgatgtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggaaaaatgggaggattagtaagctcagggatgaaaaatc 25624492  T
Q  223 aaatggcctataattgcaaggatgaaatgcgtatttaagctaaaataaa 271  Q
    ||||| ||||||||| || ||||||||||| ||||||||| ||||||||    
T  25624493 aaatgacctataattacagggatgaaatgcatatttaagccaaaataaa 25624541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 25623420 - 25623289
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25623420 cagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 25623321  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||  | ||||||||||| |||||||||    
T  25623320 tataattatagggatgaaatgcatatttaagc 25623289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 24387451 - 24387352
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  24387451 aaatgattaatttttacatggacaaaatgggaggattagtaagctcagggatgaaaaattaaatggcctataattgcagggatgaaatgcatatttaagc 24387352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 24388255 - 24388355
Alignment:
Q  162 taaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaag 261  Q
    ||||||||||||||||| |  |||||||||| |||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||| ||||||||    
T  24388255 taaatgattaatttttacaatggcaaaatggaaggattagtaagctcagggatgaaaaatcaaattgcttataattgcagggatgaaatgcatatttaag 24388354  T
Q  262 c 262  Q
    |    
T  24388355 c 24388355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 20101851 - 20101758
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaag-ctaaaataaaata 274  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| || |||||||| ||||||| |||||    
T  20101851 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagcctaaaattaaata 20101758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 20982605 - 20982525
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||||    
T  20982605 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 20982525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 29957898 - 29957818
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||||    
T  29957898 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 29957818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 20983280 - 20983371
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaataaaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| || |||||||| || ||||||||| |||| |||||    
T  20983280 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggtctataattacagggatgaaaagcatatttaagccaaaaaaaaat 20983371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 29958515 - 29958646
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | ||||||||| |  ||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  29958515 cagtgattaaccgggaagagagacgaactttcaaatgattagtaattataggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacagcc 29958614  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || ||||||||  | |||||||||    
T  29958615 tataattacagggatgaaaaacatatttaagc 29958646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 20103161 - 20103243
Alignment:
Q  180 atgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||| ||| || |||||||||    
T  20103161 atgggcaaaatgggaggattagtaagctcagggatgaaaaatctaatggcctataattacagggataaaaagcatatttaagc 20103243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 43236577 - 43236509
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||| |||| |||||| |||||    
T  43236577 tgggaggattagtaagttcagggatgaaatttcaaatggcctatatttgcagggataaaatgcatattt 43236509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 19620793 - 19620882
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgc 252  Q
    ||||||||||| |||  | ||||||||||| |||||||||||||||||||||||||  ||||||| |||||| ||| | ||| |||||||    
T  19620793 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctatatttgtagggacgaaatgc 19620882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 36755249 - 36755184
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  36755249 cacgtcatcaaattagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaa 36755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 11721371 - 11721432
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| |||||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  11721371 taattagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaatttt 11721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 37895619 - 37895684
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37895619 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 23206428 - 23206496
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatg 251  Q
    ||||||||| |||||||||||| |||| ||||||||  ||||||| |||||| |||||| |||||||||    
T  23206428 ggcaaaatgagaggattagtaacttcaaggatgaaatttcaaatgccctatatttgcaaagatgaaatg 23206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 23678032 - 23678100
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatg 251  Q
    ||||||||| |||||||||||| |||| ||||||||  ||||||| |||||| |||||| |||||||||    
T  23678032 ggcaaaatgagaggattagtaacttcaaggatgaaatttcaaatgccctatatttgcaaagatgaaatg 23678100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 43237747 - 43237815
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| ||||| |||  |||||| |||||    
T  43237747 tgggaggattagtaagttcagggataaaatttcaaatggcctatatttgcagggacaaaatgcatattt 43237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 10446932 - 10446833
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 10446833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 15848230 - 15848179
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  15848230 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 15848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 17266535 - 17266484
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||| ||||    
T  17266535 tgtgacagtgattaagtggggagagggaccaaattttaaatgattaaatttt 17266484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 25893468 - 25893555
Alignment:
Q  85 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||| || ||| ||||| ||||||||||||||| || || ||| ||||||||||| ||||||||  ||||| | ||||||||||||    
T  25893468 tcatttgactaattaacagcgccacgtcagctaattagggacgtggcagtgattaaggggggagagaaacgaatttttaaatgattaa 25893555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 36382319 - 36382252
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||    
T  36382319 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 36382252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 39423673 - 39423606
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  39423673 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 39423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 10840624 - 10840562
Alignment:
Q  115 ctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||||| ||||||||||||||||||| |||| |||||||  |||||||||||| ||||    
T  10840624 ctaattagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 10840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 16367247 - 16367333
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||    
T  16367247 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 16367333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 21103150 - 21103108
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataat 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  21103150 aggattagtaagttcagggatgaaaaaccaaacggcctataat 21103108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 1696001 - 1696046
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||    
T  1696001 gtgacagtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 6658010 - 6657969
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6658010 cagtgattaagtggggagagggacgaaattttaaatgattaa 6657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 9694048 - 9694125
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  9694048 caaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaagc 9694125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 11163319 - 11163360
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  11163319 cagtgattaagtggggagagggacgaaattttaaatgattaa 11163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 14900748 - 14900789
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14900748 cagtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 16099187 - 16099146
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  16099187 cagtgattaagtggggagagggacgaaattttaaatgattaa 16099146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 33739835 - 33739794
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  33739835 cagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 34447968 - 34447904
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  34447968 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagagacgaaat-ttaaattattaa 34447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 39498442 - 39498401
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  39498442 cagtgattaagtggggagagggacgaaattttaaatgattaa 39498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 44714057 - 44714098
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44714057 cagtgattaagtggggagagggacgaaattttaaatgattaa 44714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 1150006 - 1149938
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||| | |||||||||    
T  1150006 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaagc 1149938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 17266624 - 17266672
Alignment:
Q  129 gacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||||| ||||||||| |||||||||||| ||||    
T  17266624 gacaatgattaagtggggagaatgacgaaattttaaatgattaaatttt 17266672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 6573719 - 6573656
Alignment:
Q  85 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggag 148  Q
    |||||| |||||| ||||| ||||||||||||||| || || ||| ||||||||||| ||||||    
T  6573719 tcatttgaccaattaacagcgccacgtcagctaattagggacgtggcagtgattaaggggggag 6573656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10712881 - 10712814
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| || ||||| ||||||||||||    
T  10712881 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaa 10712814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 20911230 - 20911131
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  20911230 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 20911131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 7981120 - 7981070
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||||||||||| |||||||||  ||||||| |||||| |||||    
T  7981120 tgggaggattagtaagttcggggatgaaatttcaaatgacctatagttgca 7981070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 28599527 - 28599441
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||| ||| ||||| |||||||  ||||| ||||||||| ||||    
T  28599527 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaa 28599441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 2318314 - 2318249
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| || | ||||||||||||||| |||||||| ||||||||||||    
T  2318314 cacgtcatcaaattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaa 2318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6573182 - 6573137
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| |||||||| |||||| | ||||||||||||    
T  6573182 gtgacagtgattaaggggggagagggacgaatttttaaatgattaa 6573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 11349477 - 11349550
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttata 180  Q
    |||||||||||||||  || ||| || ||||||| ||||  ||| |||||||| |||||||||||| |||||||    
T  11349477 cacgtcagctaatcaaagacgtggcactgattaactgggttgagggacgaaattttaaatgattaaattttata 11349550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 11689688 - 11689627
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| |||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  11689688 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 11689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 13995938 - 13995979
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  13995938 cagtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 17580452 - 17580505
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||    
T  17580452 gattagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaa 17580505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33062315 - 33062356
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||||||||  |||||||||||    
T  33062315 cagtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 33882892 - 33882981
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaag-ctaaaataaa 271  Q
    ||||||||||||||||||||||  |||   ||||||  ||||||| | |||| ||||| ||||||||||| ||||| || ||||||||||    
T  33882892 ggcaaaatgggaggattagtaacctcatatatgaaatttcaaatgccttatatttgcagggatgaaatgcatattttagtctaaaataaa 33882981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 36479850 - 36479809
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  36479850 cagtgattaagtggggagatggacgaaattttaaatgattaa 36479809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 41248824 - 41248865
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  41248824 cagtgattaagtggggagagggacgaaattttaaacgattaa 41248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 7983837 - 7983905
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||||||  |||||||  ||||||| |||||| ||||   |||||||||| |||||    
T  7983837 tgggaggattagtaagttcatagatgaaatttcaaatgacctatatttgctgagatgaaatgcatattt 7983905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 32519224 - 32519156
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  32519224 aggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 32519156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 44044272 - 44044204
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||| |||||||||||||||| ||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  44044272 gccatgtcagctaatcagtgacgtggcagtaattaattgggctcagggacgaaattttaaatgattaat 44044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 22870430 - 22870561
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22870430 cagtgattaatcgggaagagagacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 22870529  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || ||||||||||| |||||||||    
T  22870530 tataattacagggatgaaatgcatatttaagc 22870561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 22869737 - 22869616
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| ||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22869737 cagtgattaaccgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 22869638  T
Q  231 tataattgcaaggatgaaatgc 252  Q
    ||||||| ||||||||||||||    
T  22869637 tataattacaaggatgaaatgc 22869616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 20857064 - 20856933
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20857064 cagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcc 20856965  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || |||||||| || |||||||||    
T  20856964 tataattacagggatgaaaagcatatttaagc 20856933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 31108008 - 31107932
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  31108008 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagc 31107932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 14744730 - 14744829
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||    
T  14744730 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacatataattgcagggatgaaatgcatatttaagc 14744829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 20857515 - 20857646
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| | |||||||||| ||||| | |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  20857515 cagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagcttaggaatgaaaaatcaaacggcc 20857614  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || |||||||| || |||||||||    
T  20857615 tataattacatggatgaaaagcatatttaagc 20857646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 123 - 258
Target Start/End: Complemental strand, 36476905 - 36476770
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||    
T  36476905 tgatgtggcagtgattatctgggaagagggacgaactttcaaatgattagtaattacaagggcaaaatgggaggattagtaagctcagggatgaaaaatc 36476806  T
Q  223 aaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||| |||||||||||||| |||||||| || |||||    
T  36476805 aaacggcctataattgcagggatgaaaagcatattt 36476770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 21978971 - 21979070
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||| ||||||||||| | ||  ||||| |||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  21978971 aaattattaatttttacagggataaaataggaggattagtaagttcgaggatgaaaaatcaaatggcttataattgcagggatgaaatgcatatttaagc 21979070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 36477356 - 36477471
Alignment:
Q  143 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaag 242  Q
    |||||||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |    
T  36477356 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaacggcctataattgcagg 36477455  T
Q  243 gatgaaatgcgtattt 258  Q
    ||||||| || |||||    
T  36477456 gatgaaaagcatattt 36477471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 20072888 - 20072968
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| || |||||||| || |||||||||    
T  20072888 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaagcatatttaagc 20072968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 39181138 - 39181058
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| || |||||||||    
T  39181138 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcttataattacagggatgaaaagcatatttaagc 39181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 20072253 - 20072122
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | ||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  20072253 cagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcc 20072154  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| ||  ||||||| || |||||||||    
T  20072153 tataattacagagatgaaaagcatatttaagc 20072122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 16532974 - 16532898
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| || |||||||| || |||||    
T  16532974 gggcaaaatggaaggattaataagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 16532898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 21978036 - 21978112
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| || |||||||| || |||||    
T  21978036 gggcaaagtgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 21978112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 8654185 - 8654108
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| || ||||||||  | |||||||||    
T  8654185 caaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaagc 8654108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 39181815 - 39181900
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| || |||| |||  | ||||||||| ||||    
T  39181815 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggattaaaaacatatttaagccaaaa 39181900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 8673777 - 8673853
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||| ||||| ||||||| ||||||||  |||||||||||||| ||||| ||||||||||| |||||    
T  8673777 gggcaaaatgggagaattagcaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 8673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 16533644 - 16533724
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||  | |||||||| || |||||||||    
T  16533644 gggcaaaatggaaggattaataagttcagagatgaaaaatcaaacggcctataattatagggatgaaaagcatatttaagc 16533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 39402148 - 39402210
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 225  Q
    ||||||||||| |||  | ||||||||||||||||||||||||| ||||||||||||||||||    
T  39402148 aaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14848976 - 14849049
Alignment:
Q  105 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  14848976 gccacgtcagctaatctagtgatgtggcagtgattaagtggggtgagggaccaaattttaaatgattaaatttt 14849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 13963022 - 13962955
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  13963022 gccacgtcatcaaattagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaa 13962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 19892578 - 19892645
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  19892578 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaa 19892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 35512290 - 35512239
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  35512290 agtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 35512239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 38442226 - 38442159
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38442226 gccacgtcatcaaattagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38442159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 21972168 - 21972104
Alignment:
Q  184 gcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||| |||||| || ||||||||    
T  21972168 gcaaaatgggaggattagtaagctgagg-atgaaaaatcaaatggcccataattacagggatgaaa 21972104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 29646634 - 29646699
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  29646634 cacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 29646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 31108338 - 31108434
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaa 260  Q
    ||||||||||| |||| | ||  ||||||| | |||||||||||||| |||||||||||||||| | ||||| ||||| ||||||||| | |||||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaat-gtctatatttgcagggatgaaatacatatttaa 31108434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 32242398 - 32242333
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32242398 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32242333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 8322539 - 8322495
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  8322539 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 8322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 25253186 - 25253086
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||  ||||| ||||| ||||||||  | |||||||||    
T  25253186 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25253087  T
Q  263 t 263  Q
    |    
T  25253086 t 25253086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 25316976 - 25316876
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||  ||||| ||||| ||||||||  | |||||||||    
T  25316976 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25316877  T
Q  263 t 263  Q
    |    
T  25316876 t 25316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 35920477 - 35920521
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  35920477 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 35920521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 5024304 - 5024355
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  5024304 agtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaa 5024355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 11047595 - 11047528
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  11047595 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaa 11047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 13362498 - 13362565
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||||||  |||||||||||||||||||| ||| |||| ||||||||||||    
T  13362498 gccacgtcatcaaattagtgatgtagcagtgattaagtggggagagagactaaattttaaatgattaa 13362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 14745548 - 14745449
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  14745548 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 14745449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 37945094 - 37944995
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| ||||||| |||||| || |||||| ||||  | |||||||||    
T  37945094 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaagc 37944995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 39453458 - 39453391
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  39453458 gccacgtcatcaaattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaa 39453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 21260965 - 21260879
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||    
T  21260965 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 21260879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 38475290 - 38475336
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38475290 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38475336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 297279 - 297320
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  297279 cagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 3529138 - 3529179
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  3529138 cagtgattaagtggggagagggacgaaattttaaatgattaa 3529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 5994021 - 5993980
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  5994021 cagtgattaagtggggagagggacgaaattttaaatgattaa 5993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 6758130 - 6758171
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6758130 cagtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 14194719 - 14194760
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14194719 cagtgattaagtggggagagggacgaaattttaaatgattaa 14194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 28269684 - 28269725
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28269684 cagtgattaagtggggagagggacgaaattttaaatgattaa 28269725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 28771134 - 28771175
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28771134 cagtgattaagtggggagagggacgaaattttaaatgattaa 28771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 31482667 - 31482708
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  31482667 cagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 41930648 - 41930607
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  41930648 cagtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 12904896 - 12904840
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| |||||| ||||||||||||||||| |||||||| |||||| ||||| ||||    
T  12904896 agtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaatttt 12904840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 33735382 - 33735342
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  33735382 aggattagtaatttcagggacgaaaaatcaaatggcctata 33735342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10684097 - 10684030
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  |||||||||||||||| ||| |||||| |||| ||||||||||||    
T  10684097 gccacgtcatcaaattagtgacatgacagtgattaagtgaggaaagtgacaaaattttaaatgattaa 10684030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 32052508 - 32052607
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  32052508 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 32052607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 33735597 - 33735696
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  33735597 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 33735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 6150583 - 6150545
Alignment:
Q  134 tgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  6150583 tgattaagtggggagagggacgaaattttaaatgattaa 6150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 7015575 - 7015509
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  7015575 gattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 7015509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 24547412 - 24547462
Alignment:
Q  122 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| ||| ||||| |||||||||||||| |||||||| ||||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaa 24547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 31119019 - 31118969
Alignment:
Q  199 tagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    |||||| |||||||||||||| |||||||||||||| ||||| ||| ||||    
T  31119019 tagtaacttcagggatgaaaattcaaatggcctatatttgcagggacgaaa 31118969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1506099 - 1506058
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  1506099 cagtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 27587280 - 27587239
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  27587280 cagtgattaaatggggagagggacgaaattttaaatgattaa 27587239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 186550 - 186510
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| ||| |||||||| ||||||||||||    
T  186550 agtgattaagtggggggagggacgaaattttaaatgattaa 186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 18934793 - 18934713
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagct 263  Q
    |||||||||  ||||||||||| |||| ||| ||||| ||||||| | |||| ||||| ||||||||  | ||||||||||    
T  18934793 ggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaagct 18934713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 19892338 - 19892294
Alignment:
Q  233 taattgcaaggatgaaatgcgtatttaag-ctaaaataaaataaa 276  Q
    |||||||||||||||||| | |||||||| |||||||||||||||    
T  19892338 taattgcaaggatgaaatacatatttaagtctaaaataaaataaa 19892294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 25253401 - 25253469
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  25253401 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 25253469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 25317192 - 25317260
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  25317192 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 25317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 127 - 262
Target Start/End: Original strand, 29192957 - 29193092
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 226  Q
    ||||||||||||||  ||| |||| ||| |||| |||||| ||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||    
T  29192957 gtgacagtgattaatcgggaagagggacaaaattttaaataattaatttttacaggggcgaaatgggaggattagtaagctcagggatgaaaaatcaaat 29193056  T
Q  227 ggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| || ||||||||||| |||||||||    
T  29193057 ggcctataattacagggatgaaatgcatatttaagc 29193092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 32717073 - 32717204
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    |||| ||||| |||| |||| |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  32717073 cagtaattaattgggaagagggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatcaaatgacc 32717172  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || ||||||||||| |||||||||    
T  32717173 tataattacagggatgaaatgcatatttaagc 32717204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 29192167 - 29192040
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||| || |||||||||||| ||||| ||||||||||||||||||    
T  29192167 cagtgattaatcgggaagagggacgaaattttaaatgattaatttttacaggggcaaaacggaaggattagtaagctcaggaatgaaaaatcaaatggcc 29192068  T
Q  231 tataattgcaaggatgaaatgcgtattt 258  Q
    ||||||| || ||||||||||| |||||    
T  29192067 tataattacagggatgaaatgcatattt 29192040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 45279303 - 45279388
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||||||||| ||||    
T  45279303 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagccaaaa 45279388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 48189118 - 48189198
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||    
T  48189118 gggcaaaatggaaggattagtaagctcagggatgaaaaatcaaacggcctataattacaaggatgaaaagcatatttaagc 48189198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 37249319 - 37249204
Alignment:
Q  143 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaag 242  Q
    |||||||| |||||| | | ||||||||| |  ||| | ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |    
T  37249319 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattaataagctcagggatgaaaaatcaaacggcctataattgcagg 37249220  T
Q  243 gatgaaatgcgtattt 258  Q
    ||||||| || |||||    
T  37249219 gatgaaaagcatattt 37249204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 44476130 - 44476063
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||    
T  44476130 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcccataattacagggatgaaa 44476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 11026651 - 11026736
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| || |||||||| || ||||||||| ||||    
T  11026651 gggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagccaaaa 11026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 2944045 - 2943914
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  2944045 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctca-ggatgaaaaatcaaacggcc 2943947  T
Q  231 tataattgcaaggat-gaaatgcgtatttaagc 262  Q
    |||||||||| |||| |||| || |||||||||    
T  2943946 tataattgcagggatagaaaagcatatttaagc 2943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 2944685 - 2944765
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||||    
T  2944685 gggcaaaatggatggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 2944765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 22736709 - 22736789
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||||||  | |||||||||    
T  22736709 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaagc 22736789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 1756631 - 1756564
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  1756631 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacaaggatgaaa 1756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 48188459 - 48188392
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  48188459 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaa 48188392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 1757323 - 1757403
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||  | |||||||||    
T  1757323 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaagc 1757403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 37249817 - 37249892
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| || |||||    
T  37249817 gggcagaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgc-aggatgaaaagcatattt 37249892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 43105314 - 43105250
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatg 246  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  43105314 gggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacaaggatg 43105250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 43105853 - 43105929
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||  |||||||    
T  43105853 gggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaaacgtattt 43105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 44481972 - 44482048
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| || |||||||| || |||||    
T  44481972 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 44482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 45278625 - 45278549
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| || |||||    
T  45278625 gggcaaaatggaaggattagtaaattcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 45278549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 11026069 - 11025963
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | ||||||||| |  |||||  |||||||||| |||||||||||||||||||||||||||||||| |||     
T  11026069 cagtgattaaccgggaagagggacgaactttcaaatgattagtaattatagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggct 11025970  T
Q  231 tataatt 237  Q
    |||||||    
T  11025969 tataatt 11025963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 33156264 - 33156331
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||    
T  33156264 gccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaa 33156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 23458251 - 23458316
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  23458251 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23458316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 9294228 - 9294295
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  9294228 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 9294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 26463884 - 26463935
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  26463884 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 26463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 33689649 - 33689716
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  33689649 gccacgtcatcgaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 43384441 - 43384374
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  43384441 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 43384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 19741188 - 19741229
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  19741188 cagtgattaagtggggagagtgacgaaattttaaatgattaa 19741229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 32716365 - 32716284
Alignment:
Q  147 agagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgg 228  Q
    |||| |||||||| ||||||| |||||||||| | ||| |||||| ||||||||||||  ||| |||| |||||||||||||    
T  32716365 agagggacgaaattttaaatggttaatttttacaagggtaaaatgagaggattagtaaactcaaggataaaaaatcaaatgg 32716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 41988104 - 41988048
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  41988104 agtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaatttt 41988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 40758302 - 40758235
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||||||    
T  40758302 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 40758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 11312995 - 11312929
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||  | |||||||||    
T  11312995 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacttatttaagc 11312929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 21300393 - 21300327
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||  | |||||||||    
T  21300393 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 21300327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 40033747 - 40033793
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  40033747 tgtgacagtgattaagtggggagagggacaaaattttaaatgattaa 40033793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 51994173 - 51994223
Alignment:
Q  122 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 51994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 53037151 - 53037217
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||  | |||||||||    
T  53037151 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagc 53037217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 2796311 - 2796270
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  2796311 cagtgattaagtggggagagggacgaaattttaaatgattaa 2796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 8041748 - 8041707
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  8041748 cagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 10770756 - 10770797
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  10770756 cagtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 21783666 - 21783621
Alignment:
Q  34 agggaagattttgagaagatgaacacagaggtataatggtcttttc 79  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  21783666 agggaagattttaagaagatgaacacatgggtataatggtcttttc 21783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36314563 - 36314604
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36314563 cagtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 48322642 - 48322683
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  48322642 cagtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 54466555 - 54466514
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  54466555 cagtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 40506080 - 40506124
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||    
T  40506080 tgacagtgattaagtgcggagagagacgaaattttaaatgattaa 40506124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 55036771 - 55036683
Alignment:
Q  161 ttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||||| |||  | ||||| | ||| ||||||||||| |||||| ||||||| ||||||| |||||| ||||| ||| ||||    
T  55036771 ttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaa 55036683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 1741487 - 1741388
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  1741487 aaatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 1741388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 25108365 - 25108432
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||| ||| |||||||||| || |  ||  |||||||| ||||||||||||    
T  25108365 gccacgtcagctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaa 25108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 44654790 - 44654845
Alignment:
Q  122 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||| ||||||||| |||||||| |||| ||||||| ||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaatttt 44654845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 25107370 - 25107304
Alignment:
Q  106 ccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||| ||| ||| |||||||||| || |  ||| |||||||| ||||||||||||    
T  25107370 ccacgtcagctaatcactgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaa 25107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 10998157 - 10998234
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| |||||    
T  10998157 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgca 10998234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 20704608 - 20704669
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||||| ||||||||||||| |||| |||||||| |||| ||||||| ||||    
T  20704608 taattagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaatttt 20704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22735440 - 22735403
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaa 219  Q
    |||||||||||||||||||||||| | |||||||||||    
T  22735440 gggcaaaatgggaggattagtaagcttagggatgaaaa 22735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 46474947 - 46474906
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  46474947 cagtgattaagtggggagagggacaaaattttaaatgattaa 46474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 46670561 - 46670610
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    |||||||| || |||||||| |||||||||||||| ||||||| ||||||    
T  46670561 caaaatggaagaattagtaacttcagggatgaaaattcaaatgacctata 46670610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 39399378 - 39399434
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||| |||||||||| ||||||||| || ||||| |||||||||||| ||||    
T  39399378 agtgacgtggcagtgattaactggggagagagatgaaattttaaatgattaaatttt 39399434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 53037096 - 53037028
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| || || ||||||||  | |||||||||    
T  53037096 aggattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaagc 53037028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 54317917 - 54317973
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||| |||||||||| | ||||||| |||||||| |||||||||||| ||||    
T  54317917 agtgacgtggcagtgattaattagggagagagacgaaattttaaatgattaaatttt 54317973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 55052545 - 55052585
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| ||||||||| |||||||| ||||||||||||    
T  55052545 agtgattaaatggggagagggacgaaattttaaatgattaa 55052585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 33401126 - 33401225
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||||    
T  33401126 aaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaagc 33401225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 123 - 262
Target Start/End: Original strand, 4117507 - 4117646
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| ||||||||||  | | |||| |||||| | | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  4117507 tgatgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatc 4117606  T
Q  223 aaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||| ||||||||||| || ||||||||  | |||||||||    
T  4117607 aaacggcctataattacagggatgaaaaacatatttaagc 4117646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 14656612 - 14656481
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| |||||||||||||||||||  |||    
T  14656612 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacagcc 14656513  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||| |||||||| || |||||||||    
T  14656512 tataattgcagggatgaaaagcatatttaagc 14656481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 17784385 - 17784484
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| || |||||||||    
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctatcattgcagggatgaaaagcatatttaagc 17784484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 4116937 - 4116800
Alignment:
Q  125 atgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaa 224  Q
    ||||| ||||||||||  | | |||| |||||| | | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  4116937 atgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaa 4116838  T
Q  225 atggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    | ||||||||||| || ||||||||  | |||||||||    
T  4116837 acggcctataattacagggatgaaaaacatatttaagc 4116800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 8427384 - 8427459
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  8427384 gggcaaaatgggaggattagtaagtccagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatt 8427459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 33400047 - 33399962
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||||||||| ||||    
T  33400047 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagccaaaa 33399962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 1661453 - 1661516
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  1661453 aaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaa 1661516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 14657228 - 14657308
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||  | |||||||| || |||||||||    
T  14657228 gggcaaaatggaaggattagtaaggtcagggataaaaaatcaaacggcctataattatagggatgaaaagcatatttaagc 14657308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 8427281 - 8427201
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||||||||||||||| || || || ||||| ||||||| |||||| ||||||||||||||  | |||||||||    
T  8427281 gggcaaaatgggaggattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatgaaagacatatttaagc 8427201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 23291844 - 23291744
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||||||||||| ||| | ||| ||||  | |||||||||    
T  23291844 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaaagacatatttaagc 23291745  T
Q  263 t 263  Q
    |    
T  23291744 t 23291744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 13480308 - 13480209
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  13480308 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 13480209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 13480492 - 13480591
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| || |||||| ||||  | |||||||||    
T  13480492 aaatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagc 13480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 21627983 - 21628050
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| ||| |||| ||||||||||||    
T  21627983 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaa 21628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 30804019 - 30803952
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  30804019 gccacgtcatcaaattagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaa 30803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 33517692 - 33517625
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||  |||||||||||||||||||| |||||||| ||||||||||||    
T  33517692 gccacgtcatcaaattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaa 33517625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 33647121 - 33647054
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  33647121 gccacgtcatcaaattagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaa 33647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 12080768 - 12080727
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  12080768 cagtgattaagtggggagagggacgaaattttaaatgattaa 12080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 28000650 - 28000691
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28000650 cagtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 30337581 - 30337540
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  30337581 cagtgattaagtggggagagggacgaaattttaaatgattaa 30337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 680024 - 679956
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   |  |||||||| |||||||||||||    
T  680024 gccacgtcagctaatcagtgatgtggcagtaattaactgggctcatggacgaaattttaaatgattaat 679956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 5064435 - 5064371
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 227  Q
    ||||||||||| |||  | ||||||| ||||||||||||||| |||||||| ||||| |||||||    
T  5064435 aaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatg 5064371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 30725917 - 30725850
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||| ||||||||| |||||||| ||||||||||||    
T  30725917 gccacgtcatcaaattagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaa 30725850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 32337664 - 32337578
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||| ||||| ||||| ||| ||||    
T  32337664 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaa 32337578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 363095 - 363136
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  363095 cagtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 1215147 - 1215208
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| ||||||||||||||||| || |||||||| |||| ||||||| ||||    
T  1215147 taattagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaatttt 1215208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 3059389 - 3059348
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  3059389 cagtgattaagtgaggagagggacgaaattttaaatgattaa 3059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 3299874 - 3299943
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagct 263  Q
    ||||||||||| |||| ||| ||||| ||||||| |||||| ||||| ||| ||||| | ||||||||||    
T  3299874 aggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaagct 3299943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 5064619 - 5064696
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||| |||  | ||||| | ||| |||||||||||  ||||||| ||||| |||||||||||||| |||||    
T  5064619 aaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgca 5064696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 14196880 - 14196921
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| | |||||| ||||||||||||    
T  14196880 cagtgattaagtggggagaggggcgaaattttaaatgattaa 14196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 17734459 - 17734500
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  17734459 cagtgattaagtggggagagggacaaaattttaaatgattaa 17734500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 23292059 - 23292132
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | ||||||||| ||||    
T  23292059 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaagccaaaa 23292132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 680998 - 681066
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||   |  |||||||| |||||||||||||    
T  680998 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcatggacgaaattttaaatgattaat 681066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 15819805 - 15819873
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  15819805 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 15819873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 16704624 - 16704692
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||| ||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  16704624 aggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 16704692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 20994975 - 20995039
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 227  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||||    
T  20994975 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 20995039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 26463326 - 26463270
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| ||| |||||||||| ||||  ||| |||||||| ||||||||||||    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 26463270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 28498298 - 28498362
Alignment:
Q  108 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||| ||| |||||||||| ||||   || ||| |||| ||||||||||||    
T  28498298 acgtcagctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 28498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 29810709 - 29810773
Alignment:
Q  108 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||| ||| |||||||||| ||||   || ||| |||| ||||||||||||    
T  29810709 acgtcagctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 29810773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 23455657 - 23455788
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| | |||||||||||||||| |  ||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  23455657 cagtgattaatcgggaagagggacgaaatttgaaatgattaatttttacagtggcaaaatgggaggattagtaagctcaggaatgaaaaatcaaatgacc 23455756  T
Q  231 tataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| || ||||||||||| |||||||||    
T  23455757 tataattacagggatgaaatgcatatttaagc 23455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 23455070 - 23454955
Alignment:
Q  147 agagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatg 246  Q
    |||| |||| ||| |||||||  ||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||||    
T  23455070 agagggacggaattttaaatgggtaatttttacaggggcaaaatgggatgattagtaagctcagggatgaaaaatcaaatggcctataattacagggatg 23454971  T
Q  247 aaatgcgtatttaagc 262  Q
    |||||| |||||||||    
T  23454970 aaatgcatatttaagc 23454955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 53477080 - 53477179
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  |||||||||| |||||||||    
T  53477080 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctataattgcagagatgaaatgcatatttaagc 53477179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 54591597 - 54591682
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaa 267  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||| ||||    
T  54591597 gggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatgatctataattgcagggatgaaatgcatatttaagccaaaa 54591682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 38982576 - 38982691
Alignment:
Q  143 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaag 242  Q
    |||||||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  38982576 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcagg 38982675  T
Q  243 gatgaaatgcgtattt 258  Q
    ||||||| || |||||    
T  38982676 gatgaaaagcatattt 38982691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 38813635 - 38813555
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||||    
T  38813635 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 38813555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 38814346 - 38814426
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| || |||||||||    
T  38814346 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctaaaattacaaggatgaaaagcatatttaagc 38814426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 54590243 - 54590146
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaa 260  Q
    ||||||||||| ||| ||  |||||||||| || |||||||||||||  |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  54590243 aaatgattaatatttgtagaggcaaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaa 54590146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 56556663 - 56556583
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| || |||||||| || |||||||||    
T  56556663 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 56556583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 56557344 - 56557436
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagctaaaataaaata 274  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||  | |||||||| || |||||||||| ||| ||||||    
T  56557344 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattagagggatgaaaagcatatttaagcttaaaaaaaata 56557436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 13336863 - 13336937
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| ||||| ||||||||||| |||||||||    
T  13336863 aatgggaggattagtaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatatttaagc 13336937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 48528628 - 48528558
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  48528628 cacgtcagctaatcagtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaatttt 48528558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 52815744 - 52815664
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||| || |||||||| || |||||||||    
T  52815744 gggcaaaatgaaaggattagtaagttcagggataaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 52815664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 52816442 - 52816522
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||  | |||||||||    
T  52816442 gggcaaaatggaaggattagtaagttcagagatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaagc 52816522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 16605760 - 16605692
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| |||||||||||||    
T  16605760 gccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaat 16605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 55013108 - 55013187
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||| || |||||||| || |||||||||    
T  55013108 gggcaaactgggaggattagtaagctcagg-atgaaaaatcaaatagcctataattacatggatgaaaagcatatttaagc 55013187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 35028268 - 35028335
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35028268 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 35028335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22882352 - 22882422
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||| |||||||||||||||||  ||||||| |||||| ||||| ||||||||||| |||||    
T  22882352 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 22882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22934016 - 22934086
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||| |||||||||||||||||  ||||||| |||||| ||||| ||||||||||| |||||    
T  22934016 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 22934086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 9254476 - 9254411
Alignment:
Q  193 gaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||| ||||||||  |||||||||||||| ||||| ||||||||||| |||||    
T  9254476 gaggattagtaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 9254411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 14801894 - 14801827
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  14801894 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 12691506 - 12691396
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| ||| || || || | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  12691506 aaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaagacctatttaagc 12691407  T
Q  263 taaaataaaat 273  Q
     | ||||||||    
T  12691406 cataataaaat 12691396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 54435347 - 54435433
Alignment:
Q  85 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 171  Q
    |||||| |||||| ||||| || |||||||||||| |||||||||  |||||||||| ||| |||| |||||||| |||||| ||||    
T  54435347 tcatttgaccaattaacagtgcgacgtcagctaattagtgatgtgttagtgattaagggggaagagggacgaaattttaaataatta 54435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 37976449 - 37976490
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  37976449 cagtgattaagtggggagagtgacgaaattttaaatgattaa 37976490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 50418929 - 50418974
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  50418929 gtgacagtgattaagtggggagagggacgaaattttaaatgattaa 50418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 17356208 - 17356256
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgat 169  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  17356208 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgat 17356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 52298168 - 52298112
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  52298168 agtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 52298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 15507943 - 15508010
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| | | |||||||||||||||||||| |||||||| ||||||||||||    
T  15507943 gccacgtcatcaaattagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaa 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 34765666 - 34765717
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  34765666 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 34765717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 48529855 - 48529918
Alignment:
Q  114 gctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||| ||| |||||||||||||| ||||| ||| |||| |||||||||||| ||||    
T  48529855 gctaatcagtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaatttt 48529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 4982991 - 4983033
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  4982991 cagtgattaagtggggagagggacgaaattttaaatgattaat 4983033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 16005975 - 16005929
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  16005975 tgtgacagtgattaagtagggagagggacgaaattttaaatgattaa 16005929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 22249993 - 22249927
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||  | |||||||||    
T  22249993 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 22249927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 22881242 - 22881172
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| || || ||||||||||| |||||    
T  22881242 aatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacagggatgaaatgcatattt 22881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 22932906 - 22932836
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtattt 258  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| || || ||||||||||| |||||    
T  22932906 aatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacagggatgaaatgcatattt 22932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 44967329 - 44967375
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  44967329 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 53129778 - 53129836
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaa 165  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| |||||    
T  53129778 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaa 53129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 53701969 - 53701903
Alignment:
Q  106 ccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||| | ||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||    
T  53701969 ccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaa 53701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 9145031 - 9145072
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  9145031 cagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 13058169 - 13058128
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  13058169 cagtgattaagtggggagagggacgaaattttaaatgattaa 13058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 18831481 - 18831440
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  18831481 cagtgattaagtggggagagagacgaaattttaaatgattaa 18831440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 23613441 - 23613400
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  23613441 cagtgattaagtggggagagggacgaaattttaaatgattaa 23613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 27934664 - 27934623
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27934664 cagtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 32950274 - 32950233
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  32950274 cagtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36009109 - 36009150
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36009109 cagtgattaagtggggagagggacgaaattttaaatgattaa 36009150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 37248368 - 37248327
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  37248368 cagtgattaagtggggagagcgacgaaattttaaatgattaa 37248327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 42738296 - 42738337
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42738296 cagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 43155792 - 43155833
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  43155792 cagtgattaagtggggagagggacgaaattttaaatgattaa 43155833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 49879472 - 49879513
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  49879472 cagtgattaagtggggagagggacgaaattttaaatgattaa 49879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 8287248 - 8287316
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  8287248 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 8287316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 10781770 - 10781822
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||| ||||||||| |||| ||||||||| |||||||| |||||||||||||    
T  10781770 agtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaat 10781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 24349816 - 24349764
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||| ||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  24349816 agtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaat 24349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 24711242 - 24711202
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  24711242 agtgattaagtggggagagggacgaaattttaaatgattaa 24711202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 32846462 - 32846362
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  |  |||||||||| ||||||| ||| |||||| | ||||| |||||||||||||| ||||||| | ||||  | |||||||||    
T  32846462 aaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaagacctatttaagc 32846363  T
Q  263 t 263  Q
    |    
T  32846362 t 32846362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 53475900 - 53475832
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| || ||||||||||| |||||||| ||||| |||||| |||||||  | |||||||||    
T  53475900 aggattagtaactttagggatgaaaactcaaatggtctatatttgcaaagatgaaagacatatttaagc 53475832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 54086992 - 54087032
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  54086992 agtgattaagtggggagagagacgaaattttaaatgattaa 54087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 22250017 - 22250116
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  22250017 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 22250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 53559671 - 53559770
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||  | |||||||||    
T  53559671 aaatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 53559770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 54961531 - 54961432
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||| ||||| ||||| ||| ||||  | |||||||||    
T  54961531 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagc 54961432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 5369079 - 5369038
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  5369079 cagtgattaagtggggagagggacaaaattttaaatgattaa 5369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 9400784 - 9400825
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  9400784 cagtgattaagtggggagagggatgaaattttaaatgattaa 9400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 22566931 - 22566890
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22566931 cagtgattaagtggggagagggatgaaattttaaatgattaa 22566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33247538 - 33247579
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  33247538 cagtgattaagtggggagagggatgaaattttaaatgattaa 33247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 34837339 - 34837380
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  34837339 cagtgattaagtggggagagggacgaaattttaaacgattaa 34837380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 35508536 - 35508577
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||  ||||||| ||||||||||||    
T  35508536 cagtgattaagtggggagagatacgaaattttaaatgattaa 35508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 35730970 - 35731031
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaa 249  Q
    ||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||    
T  35730970 aatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 35731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 38012302 - 38012261
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  38012302 cagtgattaagtggggagagagacgaaattttaaacgattaa 38012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 52909385 - 52909344
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  52909385 cagtgattaagtggggagatggacgaaattttaaatgattaa 52909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 55866386 - 55866333
Alignment:
Q  26 agtgaaggagggaagattttgagaaga-tgaacacagaggtataatggtctttt 78  Q
    |||||||||||||||||||| |||||| ||||||||  ||||| ||||||||||    
T  55866386 agtgaaggagggaagattttaagaagattgaacacatgggtatgatggtctttt 55866333  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 19740929 - 19740861
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| | |||| ||||||||| ||||  | |||||||||    
T  19740929 aggattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaagc 19740861  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 33294458 - 33294526
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| |||||| ||||||| ||||| ||| ||||  | |||||||||    
T  33294458 aggattagtaacttcagggacgaaaattcaaattgcctatatttgcagggaggaaagacatatttaagc 33294526  T

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Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 37677917 - 37677849
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  | |||||||||    
T  37677917 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagc 37677849  T

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Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 51692688 - 51692644
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| |||||||||||| |||||||| |||| |||||||    
T  51692688 tgacagtgatcaagtggggagagggacgaaattttaagtgattaa 51692644  T

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Target: scaffold1493 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 693 - 582
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaag- 261  Q
    ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||     
T  693 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaagc 594  T
Q  262 ctaaaataaaat 273  Q
    ||||||||||||    
T  593 ctaaaataaaat 582  T

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Target: scaffold0009 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 274
Target Start/End: Complemental strand, 261101 - 260990
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  261101 aaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaagc 261002  T
Q  263 taaaataaaata 274  Q
      ||||||||||    
T  261001 ctaaataaaata 260990  T

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Target: scaffold0009; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 262439 - 262540
Alignment:
Q  161 ttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaa 260  Q
    ||||||||||||| |||  | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||    
T  262439 ttaaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaa 262538  T
Q  261 gc 262  Q
    ||    
T  262539 gc 262540  T

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Target: scaffold0182 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 14400 - 14476
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||| || |||||||||    
T  14400 aaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaggggtgaaaagcatatttaagc 14476  T

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Target: scaffold0182; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 13215 - 13135
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||| ||||| || || |||||||| || |||||||||    
T  13215 gggcaaaatgggaggattactaaactcagagatgaaaaatcaaatggtctatatttacagggatgaaaagcatatttaagc 13135  T

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Target: scaffold0018 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 73190 - 73110
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||| || |||||||| || |||||||||    
T  73190 gggcaaaatgggaggattagtaagctcagggatgaaaagtcaaatggcccataattacagggatgaaaagcatatttaagc 73110  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 239821 - 239888
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||| |||| ||||||||||   || |||||||| ||||||||||||    
T  239821 gccacgtcagctaatcagtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaa 239888  T

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Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 37833 - 37900
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37833 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37900  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 69120 - 69056
Alignment:
Q  108 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  69120 acgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 69056  T

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Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 23401 - 23322
Alignment:
Q  93 ccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||||||||||||||||| ||| | ||| ||| |||||||||||||||| |||  || |||| ||||||||||||    
T  23401 ccaattaacagagccacgtcagcaaattactgacgtggcagtgattaagtggggggagaaaccaaattttaaatgattaa 23322  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 139804 - 139762
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  139804 cagtgattaagtggggagagggacgaaattttaaatgattaat 139762  T

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Target: scaffold0559 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1365 - 1324
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1365 cagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14060 - 14132
Alignment:
Q  105 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||||||| ||||| |||||| ||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  14060 gccacgtcagctaatctagtgacgtgacaatgattaagtgggg-gagggaccaaattttaaatgattaaatttt 14132  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 141859 - 141900
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  141859 cagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1901 - 1860
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1901 cagtgattaagtggggagagggacgaaattttaaatgattaa 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 10425 - 10326
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaaggatgaaatgcgtatttaagc 262  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||  ||||| ||||| ||| ||||  | |||||||||    
T  10425 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagc 10326  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 2275 - 2234
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  2275 cagtgattaagtggggagagggacaaaattttaaatgattaa 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 21234 - 21275
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  21234 cagtgattaagtggggagagggacggaattttaaatgattaa 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 14177 - 14241
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 227  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| ||||| |||||||| |||||||    
T  14177 aaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatg 14241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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