View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12599_high_37 (Length: 250)
Name: NF12599_high_37
Description: NF12599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12599_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 37343654 - 37343893
Alignment:
| Q |
4 |
agggtgatatcaaggtaaataatttgggatatctctcacaactggcctactttaatagttgtttcttaattagataaacccaaaatatgatgaatcatga |
103 |
Q |
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| T |
37343654 |
agggtgatatcaaggtaaataatttgggatatctctcacaactggcctactttaatagttgtttcttaattagataaacccaaaatatgatgaatcatga |
37343753 |
T |
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| Q |
104 |
atagactagtga---gtttaacactgatttagtgttccataagtttgtatcccttaacagctaatcatg-cttatactgatttggtattccattaaatct |
199 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
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| T |
37343754 |
atagactagtgagtcgtttaacactgatttagtgttccataagtttgtatcccttaacagctaatcatgccttatactgatttggtattccattaaacct |
37343853 |
T |
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| Q |
200 |
atattccatgggatggatccacctacatcctattgttctt |
239 |
Q |
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| T |
37343854 |
atattccatgggatggatccacctacatcctattgttctt |
37343893 |
T |
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