View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12599_low_15 (Length: 485)

Name: NF12599_low_15
Description: NF12599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12599_low_15
NF12599_low_15
[»] chr3 (48 HSPs)
chr3 (86-472)||(55291581-55291966)
chr3 (105-472)||(46722584-46722951)
chr3 (186-472)||(10554994-10555280)
chr3 (96-334)||(3803639-3803877)
chr3 (105-334)||(12305888-12306117)
chr3 (105-334)||(29544031-29544260)
chr3 (228-435)||(43549776-43549983)
chr3 (112-334)||(54521588-54521810)
chr3 (231-472)||(43929078-43929319)
chr3 (218-448)||(10833416-10833639)
chr3 (218-334)||(42353-42469)
chr3 (90-249)||(15238972-15239128)
chr3 (264-465)||(6805085-6805279)
chr3 (218-334)||(16324651-16324767)
chr3 (231-318)||(6820011-6820098)
chr3 (218-336)||(5224146-5224264)
chr3 (252-334)||(18890249-18890331)
chr3 (231-316)||(16643926-16644011)
chr3 (218-326)||(13437072-13437180)
chr3 (218-336)||(15465918-15466036)
chr3 (218-336)||(26054545-26054663)
chr3 (231-316)||(50243656-50243741)
chr3 (218-334)||(18893508-18893623)
chr3 (232-316)||(24152509-24152593)
chr3 (86-261)||(11325025-11325199)
chr3 (90-232)||(12854972-12855112)
chr3 (260-336)||(22652595-22652671)
chr3 (87-261)||(13837039-13837212)
chr3 (260-336)||(16979734-16979810)
chr3 (286-334)||(14641729-14641777)
chr3 (260-318)||(13522502-13522560)
chr3 (260-318)||(48631172-48631230)
chr3 (89-170)||(11913786-11913867)
chr3 (85-137)||(43929416-43929468)
chr3 (260-344)||(45803491-45803575)
chr3 (103-137)||(9534355-9534389)
chr3 (103-137)||(17240506-17240540)
chr3 (103-137)||(18929273-18929307)
chr3 (87-170)||(51602503-51602586)
chr3 (185-249)||(15233104-15233166)
chr3 (265-337)||(50350976-50351048)
chr3 (85-128)||(6804867-6804910)
chr3 (21-74)||(20188805-20188859)
chr3 (95-124)||(14288165-14288194)
chr3 (95-124)||(35985705-35985734)
chr3 (87-137)||(2247628-2247677)
chr3 (105-137)||(20247784-20247816)
chr3 (73-124)||(24283553-24283604)
[»] chr2 (40 HSPs)
chr2 (17-472)||(20590183-20590647)
chr2 (105-334)||(13100732-13100961)
chr2 (17-334)||(23338300-23338626)
chr2 (105-334)||(10683930-10684159)
chr2 (105-334)||(20261985-20262214)
chr2 (218-463)||(41301040-41301285)
chr2 (264-472)||(149664-149872)
chr2 (272-465)||(1383818-1384004)
chr2 (275-472)||(28345205-28345401)
chr2 (218-334)||(21072799-21072915)
chr2 (88-252)||(25652134-25652295)
chr2 (231-318)||(43707171-43707258)
chr2 (231-318)||(7187267-7187354)
chr2 (86-261)||(24161179-24161352)
chr2 (264-465)||(36734610-36734803)
chr2 (231-318)||(22173101-22173188)
chr2 (218-336)||(31345943-31346061)
chr2 (260-336)||(18358121-18358197)
chr2 (260-344)||(19647048-19647132)
chr2 (260-336)||(25184011-25184087)
chr2 (260-336)||(21081123-21081199)
chr2 (95-137)||(6483745-6483787)
chr2 (95-137)||(6487212-6487254)
chr2 (264-328)||(45535756-45535820)
chr2 (86-170)||(10039038-10039122)
chr2 (259-326)||(14183619-14183686)
chr2 (267-358)||(20006133-20006223)
chr2 (103-137)||(21908387-21908421)
chr2 (103-137)||(23265170-23265204)
chr2 (103-137)||(23280238-23280272)
chr2 (261-318)||(12626587-12626644)
chr2 (273-318)||(31521018-31521063)
chr2 (88-124)||(22704015-22704051)
chr2 (110-170)||(23086392-23086452)
chr2 (258-316)||(14179880-14179938)
chr2 (149-211)||(22795837-22795899)
chr2 (105-135)||(23101458-23101488)
chr2 (264-318)||(28652709-28652763)
chr2 (62-130)||(37380537-37380605)
chr2 (87-170)||(23375908-23375991)
[»] chr7 (75 HSPs)
chr7 (130-472)||(14105450-14105792)
chr7 (130-472)||(14415467-14415809)
chr7 (186-472)||(17505043-17505329)
chr7 (186-472)||(17547885-17548171)
chr7 (105-334)||(23664120-23664349)
chr7 (103-334)||(11304013-11304244)
chr7 (218-472)||(13647969-13648223)
chr7 (105-334)||(29797376-29797606)
chr7 (105-334)||(29801195-29801425)
chr7 (235-472)||(4325783-4326020)
chr7 (231-472)||(39431311-39431552)
chr7 (231-471)||(44190340-44190573)
chr7 (262-472)||(19194878-19195088)
chr7 (264-472)||(12754823-12755031)
chr7 (231-472)||(16462763-16462997)
chr7 (17-161)||(4994350-4994495)
chr7 (264-439)||(47975049-47975225)
chr7 (264-472)||(708679-708880)
chr7 (272-472)||(37539135-37539334)
chr7 (264-472)||(25942164-25942366)
chr7 (17-124)||(38829169-38829272)
chr7 (90-249)||(12207673-12207829)
chr7 (218-334)||(14188404-14188520)
chr7 (218-334)||(11661931-11662047)
chr7 (90-249)||(12201068-12201224)
chr7 (218-334)||(16107969-16108085)
chr7 (218-336)||(1856511-1856629)
chr7 (228-339)||(13256513-13256624)
chr7 (231-318)||(13864486-13864573)
chr7 (218-336)||(13917683-13917801)
chr7 (218-336)||(25926410-25926528)
chr7 (231-316)||(18455712-18455797)
chr7 (86-211)||(7530081-7530205)
chr7 (90-211)||(39994836-39994958)
chr7 (231-288)||(23557404-23557461)
chr7 (302-431)||(24270142-24270266)
chr7 (263-318)||(14274063-14274118)
chr7 (264-336)||(13315239-13315311)
chr7 (260-336)||(16550156-16550232)
chr7 (260-336)||(16615430-16615506)
chr7 (286-334)||(17070470-17070518)
chr7 (110-254)||(15727367-15727512)
chr7 (70-164)||(42042163-42042257)
chr7 (231-288)||(23556215-23556272)
chr7 (260-336)||(32160354-32160430)
chr7 (260-318)||(29052336-29052394)
chr7 (21-74)||(37380959-37381013)
chr7 (103-143)||(11311080-11311120)
chr7 (62-170)||(16574233-16574342)
chr7 (62-170)||(16591320-16591429)
chr7 (95-137)||(14423012-14423054)
chr7 (21-74)||(17467304-17467358)
chr7 (21-74)||(17585856-17585910)
chr7 (264-358)||(33060240-33060333)
chr7 (264-334)||(42565990-42566060)
chr7 (104-137)||(11382865-11382898)
chr7 (104-137)||(11389342-11389375)
chr7 (103-140)||(13664877-13664914)
chr7 (218-271)||(42374415-42374468)
chr7 (149-205)||(14249708-14249764)
chr7 (105-137)||(16009604-16009636)
chr7 (272-336)||(19282868-19282932)
chr7 (88-128)||(23461611-23461651)
chr7 (264-344)||(38295416-38295496)
chr7 (86-170)||(15214543-15214627)
chr7 (103-140)||(13679518-13679555)
chr7 (95-124)||(14580680-14580709)
chr7 (62-130)||(41285062-41285130)
chr7 (95-124)||(45186461-45186490)
chr7 (103-140)||(46625987-46626024)
chr7 (105-137)||(10895786-10895818)
chr7 (149-205)||(14265178-14265234)
chr7 (105-137)||(16677323-16677355)
chr7 (105-137)||(17651559-17651591)
chr7 (85-137)||(44190190-44190242)
[»] chr4 (48 HSPs)
chr4 (186-472)||(16277366-16277652)
chr4 (186-472)||(53386976-53387262)
chr4 (105-334)||(15534947-15535176)
chr4 (105-334)||(36038636-36038865)
chr4 (17-334)||(33849568-33849894)
chr4 (112-334)||(49546949-49547170)
chr4 (264-472)||(35660573-35660782)
chr4 (264-472)||(19434817-19435025)
chr4 (264-439)||(14549368-14549544)
chr4 (17-123)||(45005980-45006086)
chr4 (264-412)||(16296617-16296765)
chr4 (17-161)||(38979861-38980007)
chr4 (218-334)||(28386069-28386185)
chr4 (90-249)||(32490656-32490812)
chr4 (231-318)||(15344776-15344863)
chr4 (90-261)||(15415862-15416031)
chr4 (231-318)||(12611752-12611839)
chr4 (231-316)||(15447501-15447586)
chr4 (218-339)||(18230561-18230682)
chr4 (231-316)||(23802528-23802613)
chr4 (86-261)||(16370700-16370872)
chr4 (231-318)||(51463152-51463239)
chr4 (111-232)||(15318849-15318969)
chr4 (90-192)||(15069727-15069830)
chr4 (90-196)||(15076323-15076430)
chr4 (406-472)||(630162-630228)
chr4 (260-336)||(10694399-10694475)
chr4 (231-318)||(13043893-13043980)
chr4 (286-334)||(9638833-9638881)
chr4 (260-336)||(10908165-10908241)
chr4 (260-336)||(40620354-40620430)
chr4 (218-277)||(45005827-45005886)
chr4 (88-137)||(6512645-6512694)
chr4 (96-137)||(17143263-17143304)
chr4 (96-140)||(8834921-8834965)
chr4 (62-140)||(14035765-14035843)
chr4 (264-355)||(14477436-14477526)
chr4 (86-140)||(14912107-14912160)
chr4 (62-170)||(21188915-21189024)
chr4 (95-124)||(10783416-10783445)
chr4 (95-124)||(10972067-10972096)
chr4 (99-140)||(13888667-13888708)
chr4 (88-137)||(14931105-14931154)
chr4 (99-140)||(15245241-15245282)
chr4 (110-170)||(56114762-56114823)
chr4 (95-123)||(16485671-16485699)
chr4 (264-328)||(18462853-18462917)
chr4 (95-170)||(24046465-24046541)
[»] chr5 (45 HSPs)
chr5 (103-334)||(41875588-41875819)
chr5 (105-334)||(9776931-9777160)
chr5 (218-472)||(18419139-18419393)
chr5 (262-472)||(24668312-24668522)
chr5 (262-472)||(24738081-24738291)
chr5 (262-472)||(24750850-24751060)
chr5 (103-334)||(37804068-37804299)
chr5 (262-403)||(24594218-24594359)
chr5 (264-472)||(36508901-36509109)
chr5 (17-124)||(43242418-43242525)
chr5 (218-334)||(27868685-27868801)
chr5 (218-334)||(33472674-33472790)
chr5 (90-252)||(7786090-7786249)
chr5 (90-240)||(26707296-26707444)
chr5 (90-240)||(26977030-26977178)
chr5 (302-471)||(16604759-16604928)
chr5 (398-472)||(24617174-24617248)
chr5 (398-472)||(24713405-24713479)
chr5 (398-472)||(24746433-24746507)
chr5 (231-316)||(22412930-22413015)
chr5 (110-205)||(17021914-17022010)
chr5 (260-336)||(17011550-17011626)
chr5 (260-336)||(265860-265936)
chr5 (260-344)||(21503953-21504037)
chr5 (110-261)||(21553390-21553541)
chr5 (260-336)||(29448662-29448738)
chr5 (267-318)||(30138244-30138295)
chr5 (95-137)||(23111185-23111227)
chr5 (264-337)||(21398956-21399029)
chr5 (88-137)||(22777048-22777097)
chr5 (21-74)||(30344621-30344674)
chr5 (88-128)||(10817846-10817886)
chr5 (103-137)||(18407937-18407971)
chr5 (103-137)||(19512414-19512448)
chr5 (103-137)||(28370048-28370082)
chr5 (87-170)||(36461034-36461117)
chr5 (88-137)||(8952019-8952068)
chr5 (263-318)||(17875897-17875952)
chr5 (87-169)||(21980045-21980127)
chr5 (73-124)||(10036140-10036191)
chr5 (96-124)||(15193124-15193152)
chr5 (111-169)||(17813473-17813533)
chr5 (264-344)||(20313089-20313169)
chr5 (96-124)||(21495889-21495917)
chr5 (96-124)||(21889580-21889608)
[»] chr1 (43 HSPs)
chr1 (218-472)||(22130136-22130390)
chr1 (17-334)||(297181-297507)
chr1 (149-472)||(23194554-23194876)
chr1 (218-472)||(45574130-45574377)
chr1 (264-472)||(7052171-7052380)
chr1 (17-161)||(45308154-45308299)
chr1 (264-404)||(24723618-24723758)
chr1 (17-124)||(2331970-2332077)
chr1 (264-414)||(8306349-8306498)
chr1 (218-334)||(28313174-28313290)
chr1 (231-316)||(13880660-13880745)
chr1 (90-210)||(24476279-24476399)
chr1 (85-196)||(25091393-25091505)
chr1 (92-261)||(21526767-21526933)
chr1 (260-336)||(46197899-46197975)
chr1 (22-68)||(23194431-23194477)
chr1 (264-336)||(17901960-17902032)
chr1 (264-336)||(6833988-6834060)
chr1 (62-169)||(21180232-21180339)
chr1 (286-326)||(38056853-38056893)
chr1 (260-336)||(50001298-50001374)
chr1 (264-355)||(21188191-21188281)
chr1 (95-137)||(20437009-20437051)
chr1 (286-334)||(8276170-8276218)
chr1 (90-150)||(8686037-8686096)
chr1 (280-336)||(29763806-29763862)
chr1 (85-137)||(52984247-52984299)
chr1 (85-124)||(20058522-20058561)
chr1 (264-339)||(21239201-21239276)
chr1 (103-140)||(11158118-11158155)
chr1 (88-124)||(35064575-35064611)
chr1 (149-196)||(21986077-21986124)
chr1 (105-143)||(10811778-10811816)
chr1 (103-137)||(18712827-18712861)
chr1 (107-137)||(32651600-32651630)
chr1 (86-137)||(18271345-18271395)
chr1 (86-137)||(18275999-18276049)
chr1 (88-137)||(18824640-18824689)
chr1 (95-124)||(19336789-19336818)
chr1 (96-125)||(41315254-41315283)
chr1 (96-124)||(5381651-5381679)
chr1 (96-124)||(21986026-21986054)
chr1 (96-124)||(31926438-31926466)
[»] chr6 (41 HSPs)
chr6 (103-334)||(12942955-12943186)
chr6 (110-334)||(28288510-28288733)
chr6 (17-124)||(7430631-7430738)
chr6 (218-334)||(13765172-13765288)
chr6 (218-334)||(23956688-23956804)
chr6 (228-334)||(31021842-31021948)
chr6 (302-472)||(19234812-19234981)
chr6 (90-261)||(9184979-9185150)
chr6 (231-318)||(611641-611728)
chr6 (218-316)||(23225968-23226066)
chr6 (272-472)||(35057231-35057430)
chr6 (111-210)||(18138497-18138596)
chr6 (231-318)||(20556156-20556243)
chr6 (233-316)||(25619023-25619106)
chr6 (218-336)||(23415728-23415846)
chr6 (231-305)||(14978665-14978739)
chr6 (218-336)||(27557486-27557604)
chr6 (272-465)||(13285442-13285634)
chr6 (96-196)||(21470738-21470839)
chr6 (96-196)||(21477238-21477339)
chr6 (260-336)||(15891723-15891799)
chr6 (260-336)||(15900808-15900884)
chr6 (264-336)||(29045086-29045158)
chr6 (110-254)||(1588649-1588794)
chr6 (107-196)||(25773516-25773607)
chr6 (95-137)||(23839226-23839268)
chr6 (88-137)||(24441680-24441729)
chr6 (260-336)||(15173607-15173683)
chr6 (85-137)||(18659457-18659509)
chr6 (286-334)||(19825667-19825715)
chr6 (103-143)||(25348509-25348549)
chr6 (96-170)||(1343-1418)
chr6 (96-170)||(8302-8377)
chr6 (87-170)||(1254822-1254905)
chr6 (270-316)||(5833817-5833863)
chr6 (103-137)||(9187523-9187557)
chr6 (105-137)||(4477885-4477917)
chr6 (260-318)||(18585519-18585577)
chr6 (291-355)||(14993611-14993674)
chr6 (96-124)||(18315102-18315130)
chr6 (96-124)||(22797644-22797672)
[»] scaffold0151 (1 HSPs)
scaffold0151 (229-472)||(9782-10025)
[»] scaffold0016 (3 HSPs)
scaffold0016 (231-472)||(174232-174473)
scaffold0016 (87-254)||(182026-182192)
scaffold0016 (85-123)||(174082-174120)
[»] scaffold0070 (1 HSPs)
scaffold0070 (130-463)||(8793-9119)
[»] chr8 (46 HSPs)
chr8 (218-472)||(25483552-25483799)
chr8 (17-161)||(28854816-28854960)
chr8 (271-472)||(36732649-36732849)
chr8 (218-334)||(8413859-8413975)
chr8 (218-334)||(19882773-19882889)
chr8 (260-472)||(22483473-22483678)
chr8 (92-254)||(22617542-22617702)
chr8 (231-316)||(23661140-23661225)
chr8 (231-315)||(20455831-20455915)
chr8 (231-316)||(17460331-17460416)
chr8 (231-312)||(20463042-20463123)
chr8 (236-315)||(20460809-20460888)
chr8 (218-334)||(11775548-11775655)
chr8 (228-336)||(14397031-14397138)
chr8 (236-315)||(20455095-20455174)
chr8 (260-336)||(25657668-25657744)
chr8 (62-261)||(20387386-20387584)
chr8 (260-336)||(16198658-16198734)
chr8 (260-336)||(23478904-23478980)
chr8 (260-318)||(19880663-19880721)
chr8 (95-137)||(23482038-23482080)
chr8 (103-143)||(39364942-39364982)
chr8 (105-170)||(364854-364920)
chr8 (260-318)||(20879313-20879371)
chr8 (260-318)||(26454546-26454604)
chr8 (99-137)||(38184685-38184723)
chr8 (99-140)||(21931722-21931763)
chr8 (109-170)||(43113017-43113078)
chr8 (258-326)||(12037316-12037384)
chr8 (88-128)||(20458026-20458066)
chr8 (85-137)||(22919946-22919998)
chr8 (86-170)||(20494327-20494411)
chr8 (75-170)||(22433580-22433676)
chr8 (107-137)||(18614300-18614330)
chr8 (268-318)||(20517218-20517268)
chr8 (149-211)||(21299350-21299412)
chr8 (110-143)||(14056564-14056597)
chr8 (95-124)||(21685205-21685234)
chr8 (95-124)||(21689554-21689583)
chr8 (110-143)||(25111998-25112031)
chr8 (88-137)||(32950924-32950973)
chr8 (88-170)||(42559434-42559516)
chr8 (86-140)||(15635072-15635125)
chr8 (96-124)||(19750591-19750619)
chr8 (111-169)||(21860535-21860595)
chr8 (40-137)||(24980136-24980238)
[»] scaffold0334 (2 HSPs)
scaffold0334 (218-472)||(1812-2066)
scaffold0334 (87-169)||(2109-2191)
[»] scaffold0364 (2 HSPs)
scaffold0364 (231-472)||(7860-8092)
scaffold0364 (88-169)||(8155-8237)
[»] scaffold0026 (4 HSPs)
scaffold0026 (260-464)||(21816-22020)
scaffold0026 (88-128)||(10134-10174)
scaffold0026 (85-128)||(22210-22253)
scaffold0026 (149-209)||(36502-36562)
[»] scaffold0004 (4 HSPs)
scaffold0004 (111-248)||(385070-385208)
scaffold0004 (264-336)||(66237-66308)
scaffold0004 (107-137)||(116924-116954)
scaffold0004 (88-137)||(204328-204377)
[»] scaffold0058 (1 HSPs)
scaffold0058 (218-370)||(39923-40075)
[»] scaffold0555 (1 HSPs)
scaffold0555 (260-472)||(8951-9156)
[»] scaffold0149 (1 HSPs)
scaffold0149 (264-423)||(21275-21434)
[»] scaffold0040 (1 HSPs)
scaffold0040 (270-472)||(106325-106528)
[»] scaffold0001 (2 HSPs)
scaffold0001 (218-334)||(169265-169381)
scaffold0001 (218-334)||(176618-176734)
[»] scaffold0956 (2 HSPs)
scaffold0956 (231-317)||(2219-2305)
scaffold0956 (85-137)||(2069-2121)
[»] scaffold1276 (1 HSPs)
scaffold1276 (62-339)||(960-1238)
[»] scaffold0453 (1 HSPs)
scaffold0453 (218-334)||(7121-7237)
[»] scaffold0422 (1 HSPs)
scaffold0422 (218-334)||(3789-3905)
[»] scaffold0090 (1 HSPs)
scaffold0090 (90-243)||(31429-31580)
[»] scaffold0057 (3 HSPs)
scaffold0057 (231-318)||(72278-72365)
scaffold0057 (260-336)||(70007-70083)
scaffold0057 (96-124)||(1195-1223)
[»] scaffold0106 (4 HSPs)
scaffold0106 (232-326)||(21817-21911)
scaffold0106 (88-137)||(22010-22059)
scaffold0106 (96-125)||(29522-29551)
scaffold0106 (96-124)||(37117-37145)
[»] scaffold0480 (1 HSPs)
scaffold0480 (88-210)||(1419-1540)
[»] scaffold0200 (1 HSPs)
scaffold0200 (218-334)||(18419-18535)
[»] scaffold1439 (1 HSPs)
scaffold1439 (231-318)||(917-1004)
[»] scaffold0877 (1 HSPs)
scaffold0877 (231-316)||(2151-2236)
[»] scaffold0290 (1 HSPs)
scaffold0290 (231-316)||(916-1001)
[»] scaffold0125 (2 HSPs)
scaffold0125 (231-316)||(1174-1259)
scaffold0125 (264-337)||(28373-28446)
[»] scaffold0394 (1 HSPs)
scaffold0394 (231-318)||(12891-12978)
[»] scaffold0086 (1 HSPs)
scaffold0086 (272-465)||(35652-35836)
[»] scaffold0051 (1 HSPs)
scaffold0051 (218-336)||(31967-32084)
[»] scaffold0014 (1 HSPs)
scaffold0014 (86-261)||(189630-189803)
[»] scaffold0293 (1 HSPs)
scaffold0293 (218-336)||(19410-19528)
[»] scaffold0112 (1 HSPs)
scaffold0112 (231-316)||(23247-23332)
[»] scaffold0037 (1 HSPs)
scaffold0037 (237-318)||(82839-82920)
[»] scaffold0676 (1 HSPs)
scaffold0676 (264-360)||(2612-2708)
[»] scaffold0083 (2 HSPs)
scaffold0083 (231-303)||(42153-42225)
scaffold0083 (260-336)||(1759-1835)
[»] scaffold0061 (2 HSPs)
scaffold0061 (260-334)||(14740-14814)
scaffold0061 (260-334)||(23798-23872)
[»] scaffold0046 (2 HSPs)
scaffold0046 (260-336)||(21931-22007)
scaffold0046 (99-196)||(71510-71605)
[»] scaffold0117 (2 HSPs)
scaffold0117 (218-317)||(42514-42613)
scaffold0117 (85-136)||(26057-26108)
[»] scaffold0023 (1 HSPs)
scaffold0023 (231-318)||(163175-163262)
[»] scaffold0138 (2 HSPs)
scaffold0138 (260-336)||(20919-20995)
scaffold0138 (99-140)||(12322-12363)
[»] scaffold0034 (2 HSPs)
scaffold0034 (260-336)||(29370-29446)
scaffold0034 (86-170)||(33907-33991)
[»] scaffold0790 (1 HSPs)
scaffold0790 (110-196)||(5421-5508)
[»] scaffold0462 (3 HSPs)
scaffold0462 (272-339)||(1089-1156)
scaffold0462 (272-339)||(6595-6662)
scaffold0462 (260-336)||(11045-11121)
[»] scaffold0439 (1 HSPs)
scaffold0439 (260-318)||(12081-12139)
[»] scaffold0220 (1 HSPs)
scaffold0220 (286-334)||(13772-13820)
[»] scaffold0213 (1 HSPs)
scaffold0213 (272-339)||(18934-19001)
[»] scaffold0207 (1 HSPs)
scaffold0207 (90-246)||(9569-9726)
[»] scaffold0436 (1 HSPs)
scaffold0436 (260-336)||(8782-8858)
[»] scaffold0217 (1 HSPs)
scaffold0217 (264-336)||(28536-28608)
[»] scaffold0328 (1 HSPs)
scaffold0328 (288-344)||(18824-18882)
[»] scaffold0113 (1 HSPs)
scaffold0113 (260-331)||(35319-35390)
[»] scaffold0278 (1 HSPs)
scaffold0278 (218-276)||(23829-23887)
[»] scaffold0031 (2 HSPs)
scaffold0031 (95-140)||(121928-121973)
scaffold0031 (95-140)||(132804-132849)
[»] scaffold0696 (1 HSPs)
scaffold0696 (90-150)||(3342-3401)
[»] scaffold0077 (1 HSPs)
scaffold0077 (95-170)||(22090-22166)
[»] scaffold0635 (1 HSPs)
scaffold0635 (86-170)||(7948-8032)
[»] scaffold0461 (1 HSPs)
scaffold0461 (103-137)||(1-35)
[»] scaffold0222 (1 HSPs)
scaffold0222 (103-137)||(16848-16882)
[»] scaffold0205 (1 HSPs)
scaffold0205 (264-326)||(5774-5836)
[»] scaffold0169 (1 HSPs)
scaffold0169 (86-140)||(7001-7054)
[»] scaffold0146 (1 HSPs)
scaffold0146 (103-137)||(13660-13694)
[»] scaffold0020 (1 HSPs)
scaffold0020 (103-137)||(101921-101955)
[»] scaffold0429 (1 HSPs)
scaffold0429 (88-137)||(1978-2027)
[»] scaffold0107 (1 HSPs)
scaffold0107 (88-137)||(3912-3961)
[»] scaffold0599 (1 HSPs)
scaffold0599 (89-170)||(1062-1143)
[»] scaffold0273 (1 HSPs)
scaffold0273 (85-137)||(7700-7752)
[»] scaffold0594 (1 HSPs)
scaffold0594 (264-323)||(2075-2134)
[»] scaffold0371 (1 HSPs)
scaffold0371 (110-169)||(8516-8575)
[»] scaffold0092 (1 HSPs)
scaffold0092 (264-355)||(38600-38690)
[»] scaffold0230 (1 HSPs)
scaffold0230 (260-318)||(6948-7006)
[»] scaffold0180 (1 HSPs)
scaffold0180 (103-137)||(11654-11688)
[»] scaffold0148 (1 HSPs)
scaffold0148 (264-326)||(8673-8735)
[»] scaffold0124 (1 HSPs)
scaffold0124 (86-140)||(35416-35469)
[»] scaffold0104 (1 HSPs)
scaffold0104 (73-124)||(40759-40811)
[»] scaffold0007 (1 HSPs)
scaffold0007 (268-318)||(19022-19072)
[»] scaffold1290 (1 HSPs)
scaffold1290 (95-124)||(393-422)
[»] scaffold0815 (1 HSPs)
scaffold0815 (107-140)||(1474-1507)
[»] scaffold0402 (1 HSPs)
scaffold0402 (95-124)||(15949-15978)
[»] scaffold0326 (2 HSPs)
scaffold0326 (95-124)||(4515-4544)
scaffold0326 (95-124)||(19697-19726)
[»] scaffold0317 (1 HSPs)
scaffold0317 (103-140)||(1411-1448)
[»] scaffold0256 (1 HSPs)
scaffold0256 (270-307)||(2005-2042)
[»] scaffold0139 (1 HSPs)
scaffold0139 (107-140)||(14994-15027)
[»] scaffold0091 (2 HSPs)
scaffold0091 (95-124)||(21898-21927)
scaffold0091 (95-124)||(26095-26124)
[»] scaffold0071 (1 HSPs)
scaffold0071 (110-169)||(51991-52052)
[»] scaffold0244 (2 HSPs)
scaffold0244 (96-124)||(816-844)
scaffold0244 (96-124)||(14625-14653)
[»] scaffold0234 (1 HSPs)
scaffold0234 (88-124)||(25960-25996)
[»] scaffold0108 (1 HSPs)
scaffold0108 (96-124)||(46526-46554)
[»] scaffold0054 (1 HSPs)
scaffold0054 (96-124)||(59579-59607)
[»] scaffold0053 (1 HSPs)
scaffold0053 (96-124)||(72033-72061)
[»] scaffold0049 (2 HSPs)
scaffold0049 (149-205)||(42111-42167)
scaffold0049 (149-205)||(52806-52862)


Alignment Details
Target: chr3 (Bit Score: 333; Significance: 0; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 86 - 472
Target Start/End: Original strand, 55291581 - 55291966
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttg 184  Q
    |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55291581 ttgtagagatttgttcatc--aattcaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttg 55291678  T
Q  185 aaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtaga 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  55291679 aaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtaga 55291778  T
Q  285 ataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaa 384  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  55291779 ataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaa 55291878  T
Q  385 aactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  55291879 aactcgctaggagttcactattagcgaaactccctataactatttcgctattagctcacttttcgccattagcgaaattgcccagtga 55291966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 105 - 472
Target Start/End: Original strand, 46722584 - 46722951
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||   |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46722584 tgaattcaggtaagggtgatgtttactctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 46722683  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46722684 ggttttgggagtatgattcttggattgaaaagtgtggaaactatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttc 46722783  T
Q  305 ctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgcta 404  Q
    |||||||||||||||||| ||| | ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46722784 ctatcaaatttggggtttcggttgctgaaatttgttttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgcta 46722883  T
Q  405 ttagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  46722884 ttagcgaaactccctgtaactatttcgctattagctcacttttcgccattagcgaacttgcccagtga 46722951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 186 - 472
Target Start/End: Complemental strand, 10555280 - 10554994
Alignment:
Q  186 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 285  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10555280 aattgggaattggggtttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 10555181  T
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 385  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10555180 taatcataggttaagtttcctatcaaatttggggtttcggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 10555081  T
Q  386 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10555080 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtga 10554994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 96 - 334
Target Start/End: Complemental strand, 3803877 - 3803639
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaat 195  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3803877 ttgttcgtctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaat 3803778  T
Q  196 tgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcatagg 295  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||    
T  3803777 tgggggttaggtttttggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacatagg 3803678  T
Q  296 ttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    || |||||||||||||||||||||||||||| |||||||    
T  3803677 ttgagtttcctatcaaatttggggtttgggtggatgaaa 3803639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 12306117 - 12305888
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12306117 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggtta 12306018  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||    
T  12306017 ggtttttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttc 12305918  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  12305917 ctatcaaatttggggtttgggtggatgaaa 12305888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 105 - 334
Target Start/End: Original strand, 29544031 - 29544260
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29544031 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggtta 29544130  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||    
T  29544131 ggtttttggggtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttc 29544230  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||| || |||||||    
T  29544231 ctatcaaatttggggtttgagtggatgaaa 29544260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 228 - 435
Target Start/End: Original strand, 43549776 - 43549983
Alignment:
Q  228 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 327  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43549776 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggta 43549875  T
Q  328 gatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactat 427  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43549876 gatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactat 43549975  T
Q  428 ttcgctat 435  Q
    ||||||||    
T  43549976 ttcgctat 43549983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 112 - 334
Target Start/End: Complemental strand, 54521810 - 54521588
Alignment:
Q  112 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 211  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||     
T  54521810 aggtaagggtgagactatctctcaaggataatggttatataattctgatcttggtttagcatagttctagttgaaattggaaattgagggttaggttttt 54521711  T
Q  212 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||  ||||||| |||||||||||||    
T  54521710 ggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaa 54521611  T
Q  312 atttggggtttgggtagatgaaa 334  Q
    ||||||||||||||| |||||||    
T  54521610 atttggggtttgggtggatgaaa 54521588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 231 - 472
Target Start/End: Complemental strand, 43929319 - 43929078
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 330  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  43929319 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggtagat 43929220  T
Q  331 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 430  Q
    | |||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||| |||||    
T  43929219 ggaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaggggaaaaactcgctaggagttcgctattggcgaaacactctgtaacaatttc 43929120  T
Q  431 gctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||| |  |||| |||||||||||||||| ||||||    
T  43929119 gctattagctaacatttcgccattagcgaaattgctcagtga 43929078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 218 - 448
Target Start/End: Original strand, 10833416 - 10833639
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||     
T  10833416 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaataatcataggttaagtttcctatcaaatttg- 10833514  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
          ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10833515 ------ggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaatggaaaaactcgctaggatttcgctattagcgaaactcc 10833608  T
Q  418 ctgtaactatttcgctattagctcagttttc 448  Q
    ||||||||||||||||||||||||| |||||    
T  10833609 ctgtaactatttcgctattagctcacttttc 10833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 42469 - 42353
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42469 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 42370  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  42369 ggtttgggtggatgaaa 42353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 15239128 - 15238972
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |  ||||||||| |||||    
T  15239128 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaatgataatggttatacaattctgattttggtttagcaaggttctagttaaaatt 15239030  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatg 249  Q
    |||||||||||||||||||||  |||||||||| ||| ||| || ||||||||| |||||    
T  15239029 gggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatg 15238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 264 - 465
Target Start/End: Original strand, 6805085 - 6805279
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||       ||||||| |||||||| |||| || ||||||| |||||||    
T  6805085 aattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttg-------ggtagataaaatttggattttttgagtgaaaaatgtgcag 6805177  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||| | |||||||||||| ||| | ||||||||| ||||||| | ||||||| ||||||||||||||| | ||||  | |||| |||||||    
T  6805178 aaatcgtaacagtaggggaaaaactcgttagaaattcgctattggcgaaaccctctgtaacaatttcgctattagctaactttttgctattaccgaaatt 6805277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 16324651 - 16324767
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||| ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  16324651 tgatttttgaattggaaagtgtagaaaccattgaaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttgg 16324750  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  16324751 ggtttgggtggatgaaa 16324767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 6820098 - 6820011
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  6820098 gaaaagtgtagaaactatgtcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 6820011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 5224264 - 5224146
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  5224264 tgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 5224165  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  5224164 gatttgggttgatgaaatt 5224146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 18890331 - 18890249
Alignment:
Q  252 aattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18890331 aattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 18890249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 16644011 - 16643926
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  16644011 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagcttcctaacaaatttg 16643926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 13437180 - 13437072
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||||||||||    ||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  13437180 tgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttgg 13437081  T
Q  318 ggtttgggt 326  Q
    |||||||||    
T  13437080 ggtttgggt 13437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 15466036 - 15465918
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||||||||| |||    
T  15466036 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgg 15465937  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  15465936 gatttgggttgatgaaatt 15465918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 26054545 - 26054663
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||| ||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  26054545 tgatttttgaattgaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 26054644  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  26054645 gatttgggttgatgaaatt 26054663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 50243741 - 50243656
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  50243741 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacaaatttg 50243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 18893623 - 18893508
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||| |||| ||   |||||||||||||||||||||||| || || ||||||||||||||||||||| |||||||||||||    
T  18893623 tgatttttgaattgaaaagtgtaaaaac-atcgtaattgtgttaagaattgatgttcacgttgtggaataatcataggttaagttttctatcaaatttgg 18893525  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  18893524 ggtttgggtggatgaaa 18893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 24152509 - 24152593
Alignment:
Q  232 aaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  24152509 aaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcataacaaatttg 24152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 261
Target Start/End: Original strand, 11325025 - 11325199
Alignment:
Q  86 ttgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttt-agaatagttctagttg 184  Q
    |||||||||||||||||||  ||| |||||||||||||||||| ||||||||| |||| ||| |||| ||||||||||| ||| | ||  ||||||||||    
T  11325025 ttgtagagctttgttcatca-aatcaaggtaagggtgagactaactctcaatgttaatagttctatacttctgattttgatttaacaaaggttctagttg 11325123  T
Q  185 aaattgggaattgggggttaggttttgggagtatga-ttcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    || |||| || |||||||||||||||  || ||||| || ||| |||||| ||||||||||||||| |||| ||||||    
T  11325124 aatttggaaaatgggggttaggtttt--gactatgattttttgaattgaagagtgtagaaaccatggcaatagtgtta 11325199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 232
Target Start/End: Original strand, 12854972 - 12855112
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||| ||||||||||  |||||||||||||   |||||||||||||||||||||||||||| ||||||||||||| ||||  | |||||||||||||||     
T  12854972 agagttttgttcatca-aattaaggtaaggagtagactatctctcaatgataatggttatacaattctgattttgatttaacaaagttctagttgaaata 12855070  T
Q  190 gggaa-ttgggggttaggttttgggagtatgattcttggattga 232  Q
    || || |||| ||||||||| |   ||||||||| |||||||||    
T  12855071 ggaaatttggaggttaggttct--aagtatgatttttggattga 12855112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 22652671 - 22652595
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  22652671 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 22652595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 13837212 - 13837039
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggtttag-aatagttctagtt 183  Q
    ||||||| ||||||||||  ||| ||||||||||||||||||| ||||||||||| || || | |||||||||||||||| ||||| ||  ||||| |||    
T  13837212 tgtagagttttgttcatc--aatctaaggtaagggtgagactaactctcaatgattatagtctgtataattctgattttgttttagcaagggttctggtt 13837115  T
Q  184 gaaattgggaattgggggttaggttttgggagta-tgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
     ||||| |||| | ||| |||||||||  || || | ||| ||| |||||| |||||||||||||||||||||||||||    
T  13837114 -aaatttggaaattgggattaggtttt--gaatattaatttttgaattgaagagtgtagaaaccatgacaattgtgtta 13837039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 16979810 - 16979734
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||  ||||||| |||||||||    
T  16979810 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttgatgaaatt 16979734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 14641729 - 14641777
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14641729 taatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 14641777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 13522502 - 13522560
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  13522502 taagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 13522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 48631230 - 48631172
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  48631230 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 48631172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 11913867 - 11913786
Alignment:
Q  89 tagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| || |||| |||||||||||||||| |||||    
T  11913867 tagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattataggttgtataattctgattttgatttag 11913786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 43929468 - 43929416
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| || |||||    
T  43929468 attgtagagctttgttcatctaaattaaggtaagggtgaggctaactttcaat 43929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 45803491 - 45803575
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 344  Q
    ||||||||||||| ||||| ||||||||| |||||||| ||||||||||  |||||||| || |||| | ||||| |||| ||||    
T  45803491 taagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttgggattagggtggttgaaaattgggtttt 45803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 9534389 - 9534355
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  9534389 tctgaattaaggtaagggtgagactatctctcaat 9534355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 17240506 - 17240540
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  17240506 tctgaattaaggtaagggtgagactatctctcaat 17240540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 18929307 - 18929273
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  18929307 tctgaattaaggtaagggtgagactatctctcaat 18929273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 51602503 - 51602586
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  51602503 tgtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattatagattgtataattctgattttgatttag 51602586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 15233166 - 15233104
Alignment:
Q  185 aaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatg 249  Q
    ||||||||||||||||||||||||||  |||||||||| ||| ||| || ||||||||| |||||    
T  15233166 aaattgggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatg 15233104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 50350976 - 50351048
Alignment:
Q  265 attgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 337  Q
    |||||||||||||| ||| ||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||||    
T  50350976 attgatgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggtagatgagattt 50351048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 6804867 - 6804910
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagacta 128  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||    
T  6804867 attgtaaagcttcgttcatctaaattaaggtaagggtgagacta 6804910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 20188859 - 20188805
Alignment:
Q  21 cagttttgggagaaaacaagag-aaagcaagagaaccaagggagagccaggtgaa 74  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||| || |||||    
T  20188859 cagttttgggagaaaaccagagaaaagcaagagaatcaagggagagtcaagtgaa 20188805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 14288165 - 14288194
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  14288165 tttgttcatctgaattaaggtaagggtgag 14288194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Complemental strand, 35985734 - 35985705
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  35985734 tttgttcatctgaattaaggtaagggtgag 35985705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 2247628 - 2247677
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaat 137  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  2247628 tgtagagctttgttcatc--aatctaaggtaagggtgagactaactctcaat 2247677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 20247784 - 20247816
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||| ||||||||||||||||||||||||||    
T  20247784 tgaattcaggtaagggtgagactatctctcaat 20247816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 24283553 - 24283604
Alignment:
Q  73 aagagaatcagaat-tgtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||| | ||||||| ||| ||||||||||||||||||||||||||    
T  24283553 aagagaatcagattctgtagagattt-ttcatctgaattaaggtaagggtgag 24283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 327; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 17 - 472
Target Start/End: Original strand, 20590183 - 20590647
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20590183 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 20590282  T
Q  117 agggtgagactatctctcaatgataatggtt-atataattctgattttggtttagaatagttct------agttga--aattgggaattgggggttaggt 207  Q
    |||||||| ||| ||  |||||||  | ||| |||||||||||  | || ||   || |||| |      | |||   ||| ||||||||||||||||||    
T  20590283 agggtgaggctaacttgcaatgattttagtttatataattctgcatctgtttggcaaaagttatgaataaatttggtgaatagggaattgggggttaggt 20590382  T
Q  208 tttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttccta 307  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20590383 tttgggagtatgattattggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttttcta 20590482  T
Q  308 tcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctatta 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20590483 tcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctatta 20590582  T
Q  408 gcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  20590583 gcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgaccagtga 20590647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 105 - 334
Target Start/End: Original strand, 13100732 - 13100961
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  13100732 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgtgaattgggggtta 13100831  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||    
T  13100832 ggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtttc 13100931  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  13100932 ctatcaaatttggggtttgggtggatgaaa 13100961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 334
Target Start/End: Original strand, 23338300 - 23338626
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23338300 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagatttgtagagctttgttcatctgaattaaggta 23338399  T
Q  117 agggtgagactatctctcaatgataatggtt-atataattctgattttggtttagaatagttct------agttga--aattgggaattgggggttaggt 207  Q
    |||||||| ||| ||  |||||||  | ||| |||||||||||||| || ||   || |||| |      | |||   ||||||||||||||||||||||    
T  23338400 agggtgaggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggt 23338499  T
Q  208 tttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttccta 307  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  23338500 tttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttccta 23338599  T
Q  308 tcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||| |||||||    
T  23338600 tcaaatttggggtttgggtggatgaaa 23338626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 105 - 334
Target Start/End: Original strand, 10683930 - 10684159
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  10683930 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggtta 10684029  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| ||||||    
T  10684030 ggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttc 10684129  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  10684130 ctatcaaatttggggtttgggtggatgaaa 10684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 20262214 - 20261985
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  20262214 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggtta 20262115  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| ||||||    
T  20262114 ggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttc 20262015  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  20262014 ctatcaaatttggggtttgggtggatgaaa 20261985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 218 - 463
Target Start/End: Original strand, 41301040 - 41301285
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41301040 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgg 41301139  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
    | |||||||||||||||||||| |||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  41301140 gatttgggtagatgaaatttggattttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 41301239  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    ||||||||||||||||||||||||| ||||| | || |||||||||    
T  41301240 ctgtaactatttcgctattagctcacttttcgctatcagcgaaatt 41301285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 264 - 472
Target Start/End: Original strand, 149664 - 149872
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||| |    
T  149664 aattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcgg 149763  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||| | ||||| | ||||||||||||||| | ||||| ||||||||||||||    
T  149764 aaatcgtaacagcaggggagaaactcgctagaagttcgctattagcgaaaccctctgtagcaatttcgctattagctaacttttcgccattagcgaaatt 149863  T
Q  464 gcccagtga 472  Q
    || ||||||    
T  149864 gcacagtga 149872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 272 - 465
Target Start/End: Original strand, 1383818 - 1384004
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgta 371  Q
    ||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||  |||| |||||||||| |||||||||||||||    
T  1383818 ttcaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttgtgttttttgggtgaaaaatgtgcagaaatcgta 1383910  T
Q  372 acagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgc 465  Q
    |||||| | || ||||||||||| ||||||||||| ||||||  | ||||||| ||||||| ||||||| | ||||| ||||||||||||||||    
T  1383911 acagcaggagagaaactcgctagaagttcgctattggcgaaatcctctgtaacgatttcgcgattagctaacttttcgccattagcgaaattgc 1384004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 275 - 472
Target Start/End: Original strand, 28345205 - 28345401
Alignment:
Q  275 aggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgtaac 373  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||| |||| |||| ||||||||||||    
T  28345205 aggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagataaaatttgggtttt-tgggtgaaaaagtgtgtagaaatcgtaac 28345303  T
Q  374 agcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcaccattagcgaaattgcccagtga 472  Q
    |||| ||| |||||||||||| ||||||||||| ||||||  | ||||||| ||||||||| |||| |||  |||| |||||||||||||||| ||||||    
T  28345304 agcatggg-aaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctaatagc-cagagtttcgccattagcgaaattgcacagtga 28345401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 21072799 - 21072915
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  21072799 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttgg 21072898  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  21072899 ggtttgggtggatgaaa 21072915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 25652295 - 25652134
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaa 187  Q
    |||||||||||||||||  ||| |||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||| |   ||||||||||||    
T  25652295 gtagagctttgttcatca-aatcaaggtaagggtgggactaactctcaatgataatagttatacaattctgattttggtttagcaagattctagttgaaa 25652197  T
Q  188 ttgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgaca 252  Q
    |||||||||||||||||||||||  ||  |||||| ||| ||| || ||||||||| ||||||||    
T  25652196 ttgggaattgggggttaggtttt--gatgatgatttttgaattaaagagtgtagaatccatgaca 25652134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 43707171 - 43707258
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  43707171 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 7187354 - 7187267
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||    
T  7187354 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttctggttgtagaataatcatagattaagtttcctaacaaatttggg 7187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 86 - 261
Target Start/End: Complemental strand, 24161352 - 24161179
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagtt 183  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||| ||||| ||  |||||||||    
T  24161352 ttgtagagctttgttcatc--aattcaaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttgatttagcaagggttctagtt 24161255  T
Q  184 gaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    ||| |||| ||||||||||||| ||||  || ||||||| ||| ||| || |||||| |||||||| |||| ||||||    
T  24161254 gaatttggaaattgggggttagatttt--gattatgatttttgaattaaagagtgtaaaaaccatggcaatggtgtta 24161179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 465
Target Start/End: Original strand, 36734610 - 36734803
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaat-tgtgca 362  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||       |||||||||||||| |||| | ||||||||  |||| |    
T  36734610 aattggtgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg-------tagatgaaatttgggtttt-taggtgaaaaagtgtgta 36734701  T
Q  363 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaat 462  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||  | ||||||| ||||| | | |||||   ||||| |||||||||||||    
T  36734702 gaaattgtaacagcaggggaaaa-ctcgctagaagttcgctattggcgaaatcctctgtaacaatttcaccaatagctagattttcgccattagcgaaat 36734800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 22173101 - 22173188
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  22173101 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttatgttttctaacaaatttggg 22173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 31346061 - 31345943
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||   |||||||| |||||||| |||||||||||||||||||    
T  31346061 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttgg 31345962  T
Q  318 ggtttgggtagatgaaatt 336  Q
      ||||||| |||||||||    
T  31345961 tatttgggttgatgaaatt 31345943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 18358121 - 18358197
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  18358121 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 18358197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 19647132 - 19647048
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 344  Q
    ||||||||||||||||||| |||||||||  |||||| | ||||||||||||||||||| ||| ||||| ||||||| |||||||    
T  19647132 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgggatttaggtagttgaaattgggttttt 19647048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 25184087 - 25184011
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| ||||||   ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  25184087 taagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 25184011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 21081123 - 21081199
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  21081123 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttgatgaaatt 21081199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 6483787 - 6483745
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6483787 tttgttcatctaaattaaggtaagggtgagactatctctcaat 6483745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 6487254 - 6487212
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6487254 tttgttcatctaaattaaggtaagggtgagactatctctcaat 6487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 45535820 - 45535756
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 328  Q
    ||||||||||||||| |||||||||  |||||| | ||||||| ||||||||||| |||||||||    
T  45535820 aattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatttgggtag 45535756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 10039038 - 10039122
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  10039038 ttgtagagctttgttcatc--aattcaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 10039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 14183619 - 14183686
Alignment:
Q  259 ttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 326  Q
    |||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||  |||||||    
T  14183619 ttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggt 14183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 20006133 - 20006223
Alignment:
Q  267 tgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattg 358  Q
    ||||||||| || |||||||||  |||||| | ||||||||||||||||||| ||||||||| || |||| || |||| || ||||||||||    
T  20006133 tgatgttcatgttgtagaataacaataggtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttt-tgagtgaaaattg 20006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 21908421 - 21908387
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  21908421 tctgaattaaggtaagggtgagactatctctcaat 21908387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 23265204 - 23265170
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  23265204 tctgaattaaggtaagggtgagactatctctcaat 23265170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 23280272 - 23280238
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  23280272 tctgaattaaggtaagggtgagactatctctcaat 23280238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 12626587 - 12626644
Alignment:
Q  261 aagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||| ||||||||| |||| ||| ||||||||||  ||||||||    
T  12626587 aagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggg 12626644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 31521063 - 31521018
Alignment:
Q  273 tcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||    
T  31521063 tcaggttgtagaataatcataggttaagtttcctaactaatttggg 31521018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 22704051 - 22704015
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||| |||||||||||||||||||||||||||    
T  22704051 gtagagcttcgttcatctgaattaaggtaagggtgag 22704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 23086452 - 23086392
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag 170  Q
    ||||||||||||||| ||| ||||||||||| || | | |||||||||||||||| |||||    
T  23086452 taaggtaagggtgaggctaactctcaatgattatagatgtataattctgattttgatttag 23086392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 14179880 - 14179938
Alignment:
Q  258 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    ||||| ||||| ||||||||| || ||||||||||||||   |||||||||||||||||    
T  14179880 gttaataattggtgttcaggttgtggaataatcataggtagtgtttcctatcaaatttg 14179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 22795837 - 22795899
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 211  Q
    |||||||||||||||||||||   ||||||| || ||||||||||||| |||  |||||||||    
T  22795837 tataattctgattttggtttaacctagttctggtagaaattgggaatttgggtctaggttttg 22795899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 135
Target Start/End: Original strand, 23101458 - 23101488
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctca 135  Q
    |||||||||||||||||||||||||||||||    
T  23101458 tgaattaaggtaagggtgagactatctctca 23101488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 28652709 - 28652763
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||| ||||||||||||||||   ||||| |||| |||||||||    
T  28652709 aattgatgttcaggtagtagaataatcataggaagagttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 37380605 - 37380537
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaattaaggtaagggtgagactatc 130  Q
    ||||||| |||  |||||||||| | |||||||||||||||||| ||  |||||||||||||||||||||    
T  37380605 agagccaagtggggagaatcagattctgtagagctttgttcatc-gatctaaggtaagggtgagactatc 37380537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 23375991 - 23375908
Alignment:
Q  87 tgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatg-ataatggttatataattctgattttggtttag 170  Q
    |||||||||||||||||| ||  ||||||||||||||| ||| || |||||| |||  | |||||||||||||||| || |||||    
T  23375991 tgtagagctttgttcatc-gatctaaggtaagggtgaggctaactttcaatgaatatagtttatataattctgattctgttttag 23375908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 130 - 472
Target Start/End: Original strand, 14105450 - 14105792
Alignment:
Q  130 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 229  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14105450 ctctcaatgataatggttatataattctaattttggtttagaatagttctagctgaaattgggaattgggggttaggttttgggagtatgattcttggat 14105549  T
Q  230 tgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtaga 329  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14105550 tgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttga 14105649  T
Q  330 tgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 429  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14105650 tgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgttaggagttcgctattagcgaaactccctgtaactattt 14105749  T
Q  430 cgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  14105750 cgctattagctcacttttcgccattagcgaaattgcccagtga 14105792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 130 - 472
Target Start/End: Original strand, 14415467 - 14415809
Alignment:
Q  130 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 229  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14415467 ctctcaatgataatggttatataattctaattttggtttagaatagttctagctgaaattgggaattgggggttaggttttgggagtatgattcttggat 14415566  T
Q  230 tgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtaga 329  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14415567 tgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttga 14415666  T
Q  330 tgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 429  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14415667 tgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 14415766  T
Q  430 cgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||| ||||| ||||||||||| ||||| |||||    
T  14415767 cgctattagctcacttttcgccattagcgaacttgcctagtga 14415809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 186 - 472
Target Start/End: Original strand, 17505043 - 17505329
Alignment:
Q  186 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17505043 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 17505142  T
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 385  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17505143 taatcataggttaagtttcctatcaaatttggagtttgggtagatgaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaa 17505242  T
Q  386 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17505243 actcgctaggagttcgctattagcaaaactccctgtaactatttcgctcttagctcagttttcgccattagcgaaattgcccagtga 17505329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 186 - 472
Target Start/End: Complemental strand, 17548171 - 17547885
Alignment:
Q  186 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17548171 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 17548072  T
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 385  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17548071 taatcataggttaagtttcctatcaaatttggagtttgggtagatgaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaa 17547972  T
Q  386 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17547971 actcgctaggagttcgctattagcaaaactccctgtaactatttcgctcttagctcagttttcgccattagcgaaattgcccagtga 17547885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 105 - 334
Target Start/End: Original strand, 23664120 - 23664349
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23664120 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggtta 23664219  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||    
T  23664220 ggtttttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttc 23664319  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  23664320 ctatcaaatttggggtttgggtggatgaaa 23664349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 103 - 334
Target Start/End: Complemental strand, 11304244 - 11304013
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11304244 tctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggt 11304145  T
Q  203 taggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 302  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||| |||||||| ||||    
T  11304144 taggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 11304045  T
Q  303 tcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||| |||||||| |||||||    
T  11304044 tcctatcaaatttggtgtttgggtggatgaaa 11304013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 218 - 472
Target Start/End: Complemental strand, 13648223 - 13647969
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  13648223 tgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgg 13648124  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
    | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13648123 gatttaggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaacttgctaggatttcgctattagcgaaactcc 13648024  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||| ||||| | | ||||||||||||| |||||    
T  13648023 ctgtaactatttcgctattagctcacttttcgctactagcgaaattgcctagtga 13647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 29797606 - 29797376
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  29797606 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagctgaaattgggaattgggggtta 29797507  T
Q  205 gg-ttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttt 303  Q
    || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||| | ||||||||| |||| ||| |||||    
T  29797506 ggttttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagttt 29797407  T
Q  304 cctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||| |||||||    
T  29797406 cctatcaaatttggggtttgggtggatgaaa 29797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 29801425 - 29801195
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  29801425 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagctgaaattgggaattgggggtta 29801326  T
Q  205 gg-ttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttt 303  Q
    || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||| | ||||||||| |||| ||| |||||    
T  29801325 ggttttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagttt 29801226  T
Q  304 cctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||| |||||||    
T  29801225 cctatcaaatttggggtttgggtggatgaaa 29801195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 235 - 472
Target Start/End: Complemental strand, 4326020 - 4325783
Alignment:
Q  235 agtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  4326020 agtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 4325921  T
Q  335 tttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgcta 434  Q
    ||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||| ||||| |||    
T  4325920 tttgggttttttaggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggaattcgctattggcgaaacactctgtaacaatttcacta 4325821  T
Q  435 ttagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||| |  |||| |||||||||||||||| ||||||    
T  4325820 ttagctaacctttcgccattagcgaaattgctcagtga 4325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 231 - 472
Target Start/End: Original strand, 39431311 - 39431552
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 330  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||| |||||||| ||    
T  39431311 gaaaagtgtagaaaccatgtcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggatttgggtaaat 39431410  T
Q  331 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 430  Q
    ||||||||| |||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| | || |||| |||||    
T  39431411 gaaatttggattttttggatgaaaaatgtgcagaaatcgtaacaacaagggaaaaactcgctagaagttcgctattggcgaaaccctctctaacaatttc 39431510  T
Q  431 gctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||| | ||||  || ||||||||||||| ||||||    
T  39431511 gctattagctaactttttgccgttagcgaaattgcacagtga 39431552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 231 - 471
Target Start/End: Original strand, 44190340 - 44190573
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 330  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  44190340 gaaaagtgaagaaaacatgacaattgagttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagat 44190439  T
Q  331 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 430  Q
    ||||||  |||||| |||        |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||     
T  44190440 gaaattcagtttttttgg-------atgtgcagaaatcataacagcaagggaaaaactcgctaggagttcgctattggcgaaacctcctgtaacaatttt 44190532  T
Q  431 gctattagctcagttttcaccattagcgaaattgcccagtg 471  Q
    |||||||||| | ||||| |||||||||||||||| |||||    
T  44190533 gctattagctaacttttcgccattagcgaaattgctcagtg 44190573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 262 - 472
Target Start/End: Complemental strand, 19195088 - 19194878
Alignment:
Q  262 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 361  Q
    ||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||    
T  19195088 agaattgttattcagattgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgc 19194989  T
Q  362 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaa 461  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||| ||||| | ||||| ||||||||||||    
T  19194988 agaaatcgtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctactagctaacttttcgccattagcgaaa 19194889  T
Q  462 ttgcccagtga 472  Q
    |||| ||||||    
T  19194888 ttgcacagtga 19194878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 264 - 472
Target Start/End: Original strand, 12754823 - 12755031
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || || |||| |||||||    
T  12754823 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgagtaaaaaatgtgcag 12754922  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||| |||| | ||||||| ||| ||||||||||| |  |||| | ||||||||||||    
T  12754923 aaatcgtaacagtaggggaaaaactcgctagaagtttgctattagctaaaccctctgtaacaattgcgctattagctaacgtttcgctattagcgaaatt 12755022  T
Q  464 gcccagtga 472  Q
    || ||||||    
T  12755023 gcacagtga 12755031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 231 - 472
Target Start/End: Complemental strand, 16462997 - 16462763
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 330  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||       |||||    
T  16462997 gaaatgtgtagaaacgatggcaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg-------tagat 16462905  T
Q  331 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 430  Q
    |||||||||||||| |||||||||| |||||||||||||||| || |  ||||||||| | ||| ||||||||||| ||||| | |  |||||| |||||    
T  16462904 gaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaaaagtagtggaaaaacttgatagaagttcgctattggcgaatccctttgtaacaatttc 16462805  T
Q  431 gctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||| | ||||| | ||||||||| |||| ||||||    
T  16462804 gctattagctaacttttcgctattagcgaagttgcacagtga 16462763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 4994495 - 4994350
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  4994495 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagaaaatcagaattgtagggctttgttcatctgaattaaggta 4994396  T
Q  117 agggtgagactatctctcaatgataat-ggttatataattctgatt 161  Q
    |||||||| ||| ||  |||||||  | | ||||||||||||||||    
T  4994395 agggtgaggctaacttgcaatgattttagtttatataattctgatt 4994350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 264 - 439
Target Start/End: Original strand, 47975049 - 47975225
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 362  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||| ||||| | |||||||| ||||||    
T  47975049 aattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatgaaatttgggtttttttcggtgaaaaatgtgca 47975148  T
Q  363 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagc 439  Q
     |||||||||||| | |||||||||||||||| ||||||||||| ||||||| | ||||||| ||||||||||||||    
T  47975149 aaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaaaccctctgtaacaatttcgctattagc 47975225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 264 - 472
Target Start/End: Original strand, 708679 - 708880
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||| | |||||||| |||||||    
T  708679 aattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttgggtttttttggtgaaaaatgtgcag 708771  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||||  |||||||||||||||| ||||  ||||| | ||||| | ||||||| ||||||||||||||| | ||||| | ||||||||||||    
T  708772 aaatcgtaacagcgggggaaaaactcgctagaagttttctattggtgaaaccctctgtaacaatttcgctattagctaacttttcgctattagcgaaatt 708871  T
Q  464 gcccagtga 472  Q
    || ||||||    
T  708872 gcacagtga 708880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 272 - 472
Target Start/End: Complemental strand, 37539334 - 37539135
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 370  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||| |||| |||| |||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaatttggatttt-tgggtgaaaaagtgtgtagaaatcgt 37539236  T
Q  371 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagt 470  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||||  | || |||| ||||||||| |||||   ||||| |||||||||||||||| ||||    
T  37539235 aacagcatggg-aaaactcgctagaagttcgctattggcgaaatcctctataacaatttcgctaatagctagattttcgccattagcgaaattgcacagt 37539137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 264 - 472
Target Start/End: Complemental strand, 25942366 - 25942164
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 362  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||| |||| |    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg-------tagatgaaatttgggtttttttgggtgaaaaatgtgta 25942274  T
Q  363 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaat 462  Q
    ||||||||||||||| | |||||||||||||| ||||||||||| | ||||  | ||||||| |||||| ||||||||   |||||  ||||||||||||    
T  25942273 gaaatcgtaacagcaggagaaaaactcgctagaagttcgctattggtgaaatcctctgtaacaatttcgatattagctagattttcgacattagcgaaat 25942174  T
Q  463 tgcccagtga 472  Q
    ||| ||||||    
T  25942173 tgcacagtga 25942164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 38829272 - 38829169
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38829272 acatcagttttgggagaaaacaagagaaagcaa----accaagggagagccaggtgaagagaatcataattgtagagctttgttcatctgaattaaggta 38829177  T
Q  117 agggtgag 124  Q
    ||||||||    
T  38829176 agggtgag 38829169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 12207673 - 12207829
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |  |||||||||||||||    
T  12207673 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaatgataatggttgtacaattctgattttggtttagcaaggttctagttgaaatt 12207771  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatg 249  Q
    |||||||||||||||||||||  ||||||| || ||| ||| || ||||||||| |||||    
T  12207772 gggaattgggggttaggtttt--gagtatgctttttgaattaaagagtgtagaatccatg 12207829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 14188404 - 14188520
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||| |||||||||||||   |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  14188404 tgatttttgaattgaaatgtgtagaaaccatcgaaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttgg 14188503  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  14188504 ggtttgggtggatgaaa 14188520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 11662047 - 11661931
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  11662047 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttgg 11661948  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  11661947 ggtttgggtggatgaaa 11661931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 12201068 - 12201224
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||| |||| ||| || ||||||||||||||||||| |   ||||||||||||||    
T  12201068 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaatggtaatagttgtacaattctgattttggtttagcaagattctagttgaaatt 12201166  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatg 249  Q
    |||||||||||||||||||||  |||||||||| ||  ||| || ||||||||| |||||    
T  12201167 gggaattgggggttaggtttt--gagtatgatttttcaattaaagagtgtagaatccatg 12201224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 16107969 - 16108085
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  16107969 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttgg 16108068  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  16108069 ggtttgggtggatgaaa 16108085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 1856511 - 1856629
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  1856511 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 1856610  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  1856611 gatttgggttgatgaaatt 1856629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 13256624 - 13256513
Alignment:
Q  228 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 327  Q
    ||||||||||||||||| |||   |||||||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||| |||||||     
T  13256624 attgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggatttgggtt 13256525  T
Q  328 gatgaaatttgg 339  Q
    ||||||| ||||    
T  13256524 gatgaaaattgg 13256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 13864486 - 13864573
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||    
T  13864486 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcagattgtataataatcataggttaagtttcctaacaaatttggg 13864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 13917683 - 13917801
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  13917683 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 13917782  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | | ||||| |||||||||    
T  13917783 gatctgggttgatgaaatt 13917801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 25926410 - 25926528
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||| ||||||||    
T  25926410 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgg 25926509  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  25926510 gatttgggttgatgaaatt 25926528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 18455712 - 18455797
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||    
T  18455712 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctaacaaatttg 18455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 7530205 - 7530081
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagtt 183  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||  ||| |||| ||||||||||| ||||| || ||||||||||    
T  7530205 ttgtagagctttgttcatc--aattcaaggtaagggtgagactaactctcaatgataacagttgtatacttctgattttgatttagcaagagttctagtt 7530108  T
Q  184 gaaattgggaattgggggttaggttttg 211  Q
    ||| |||| ||||||||| |||||||||    
T  7530107 gaatttggaaattggggg-taggttttg 7530081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 39994836 - 39994958
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttt-agaatagttctagttgaaat 188  Q
    |||||||||||||||  ||| ||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||| ||| | ||  |||||||||||| |    
T  39994836 agagctttgttcatcaaaatcaaggtaaaggtgagactaactctcaatgataatagttctatacttctgattttgatttaacaagggttctagttgaatt 39994935  T
Q  189 tgggaattgggggttaggttttg 211  Q
    ||| |||| ||||||||||||||    
T  39994936 tggaaattaggggttaggttttg 39994958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 23557461 - 23557404
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataa 288  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  23557461 gaaaagtgtagaaaccatgacaattgtgttatgaattgatgttcaggttgtagaataa 23557404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 431
Target Start/End: Original strand, 24270142 - 24270266
Alignment:
Q  302 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 401  Q
    ||||||||||||||||| |||| ||||||||||||||  |||| | |||||||| |||| ||||||||||     | |||||||||||||||| ||||||    
T  24270142 ttcctatcaaatttgggatttgagtagatgaaatttgagtttttttggtgaaaaatgtgtagaaatcgta-----aggggaaaaactcgctagaagttcg 24270236  T
Q  402 ctattagcgaaactccctgtaactatttcg 431  Q
    ||||| ||||||  | ||||||| ||||||    
T  24270237 ctattggcgaaatcctctgtaacaatttcg 24270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 14274118 - 14274063
Alignment:
Q  263 gaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14274118 gaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 14274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 13315239 - 13315311
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||    
T  13315239 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaatt 13315311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 16550156 - 16550232
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  16550156 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaatt 16550232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 16615506 - 16615430
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  16615506 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaatt 16615430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 17070470 - 17070518
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17070470 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 17070518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 254
Target Start/End: Original strand, 15727367 - 15727512
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggttta--gaatagttctagttgaaattgggaattgggggttagg 206  Q
    ||||||||||||||||||| ||||||||||| || || |||||||||||||| ||| ||||   ||  ||||||||| || |||||| ||| || |||||    
T  15727367 taaggtaagggtgagactaactctcaatgattatagtctatataattctgatgttgatttaacaaagggttctagtt-aatttgggatttgaggtttagg 15727465  T
Q  207 ttttgggagtat-gattcttggattgaaaagtgtagaaaccatgacaat 254  Q
    ||||  || ||| |||| ||| |||||||||||||||||||||||||||    
T  15727466 tttt--gattatagatttttgaattgaaaagtgtagaaaccatgacaat 15727512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 42042257 - 42042163
Alignment:
Q  70 gtgaagagaatcagaatt--gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttg 164  Q
    |||||||||| |||||||  |||||||||||||| ||  |||||||||||||||||||||| ||||||||||| || | | ||| ||||||||||||    
T  42042257 gtgaagagaaccagaattatgtagagctttgttcttc--aattaaggtaagggtgagactaactctcaatgattatagatgtatgattctgattttg 42042163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 23556272 - 23556215
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataa 288  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  23556272 gaaaagtgtagaaaccatgacaatcgtgttatgaattgatgttaaggttgtagaataa 23556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 32160354 - 32160430
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | ||||| | |||||||||    
T  32160354 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttggattgatgaaatt 32160430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 29052336 - 29052394
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  29052336 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 29052394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 37381013 - 37380959
Alignment:
Q  21 cagttttgggagaaaacaagagaaa-gcaagagaaccaagggagagccaggtgaa 74  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  37381013 cagttttgggagaaaaccagagaaaagcaagagaaccaagggagagccaagtgaa 37380959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 11311120 - 11311080
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataat 143  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  11311120 tctgaattaaggtaagggtgagactatctctcaataataat 11311080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 16574342 - 16574233
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctg 158  Q
    |||||||||||  |||||||||| | ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||| | || | |||||||||||||    
T  16574342 agagccaggtggggagaatcagattctgtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatggttatagtttatataattctg 16574245  T
Q  159 attttggtttag 170  Q
    ||| || |||||    
T  16574244 attctgttttag 16574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 16591320 - 16591429
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctg 158  Q
    |||||||||||  |||||||||| | ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||| | || | |||||||||||||    
T  16591320 agagccaggtggggagaatcagattctgtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatggttatagtttatataattctg 16591417  T
Q  159 attttggtttag 170  Q
    ||| || |||||    
T  16591418 attctgttttag 16591429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 14423054 - 14423012
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  14423054 tttgttcatctaaactaaggtaagggtgagactatctctcaat 14423012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 17467304 - 17467358
Alignment:
Q  21 cagttttgggagaaaacaagagaaa-gcaagagaaccaagggagagccaggtgaa 74  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||    
T  17467304 cagttttgggagaaaaccagagaaaagcaagagaacgaagggagagccaagtgaa 17467358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 17585910 - 17585856
Alignment:
Q  21 cagttttgggagaaaacaagagaaa-gcaagagaaccaagggagagccaggtgaa 74  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||    
T  17585910 cagttttgggagaaaaccagagaaaagcaagagaacgaagggagagccaagtgaa 17585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 33060333 - 33060240
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattg 358  Q
    ||||||||||||||| |||||||||  |||||| | ||||| |||| |||||||| ||||||||| || |||| || |||| ||| |||||||||    
T  33060333 aattgatgttcaggtcgtagaataacaataggtaatgtttcatatcgaatttgggatttgggtagttgtaattggggtttt-tggatgaaaattg 33060240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 42565990 - 42566060
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||| |||||||||  |||||| | |||||||||||||||||   ||||||||| |||||    
T  42565990 aattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgaaatttgggtagttgaaa 42566060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 11382865 - 11382898
Alignment:
Q  104 ctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||||||||||||||||||||||||||    
T  11382865 ctgaattaaggtaagggtgagactatctctcaat 11382898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 11389342 - 11389375
Alignment:
Q  104 ctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||||||||||||||||||||||||||    
T  11389342 ctgaattaaggtaagggtgagactatctctcaat 11389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 13664914 - 13664877
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13664914 tctgaattaaggtaagggtgagactatctttcaatgat 13664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 42374415 - 42374468
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatg 271  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||    
T  42374415 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatg 42374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 14249708 - 14249764
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 205  Q
    |||||||||||||||||||||  |||||||| ||| |||||||||||| ||| ||||    
T  14249708 tataattctgattttggtttaacatagttctggttaaaattgggaatttgggtttag 14249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 16009636 - 16009604
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||    
T  16009636 tgaattaaggtaagggtgagactatctctcaat 16009604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 19282932 - 19282868
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||||| |||||||||||||||||  ||||| |||||||||||||  ||||| | |||||||||    
T  19282932 ttcaggttgtagaataatcataggtagagttttctatcaaatttggaatttggattgatgaaatt 19282868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 23461611 - 23461651
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagacta 128  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  23461611 gtagagcttcgttcatctaaattaaggtaagggtgagacta 23461651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 38295496 - 38295416
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 344  Q
    ||||| ||||||||  |||||||||||||||||  ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  38295496 aattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 38295416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 15214627 - 15214543
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||||||| ||||||||  |||| |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  15214627 ttgtagagctgtgttcatc--aattcaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 15214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 13679555 - 13679518
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  13679555 tctgaaataaggtaagggtgagactatctttcaatgat 13679518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 14580680 - 14580709
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  14580680 tttgttcatctgaattaaggtaagggtgag 14580709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 41285130 - 41285062
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaattaaggtaagggtgagactatc 130  Q
    ||||||| |||  |||||||||| | |||||||||||||||||| ||  |||||||||||||||||||||    
T  41285130 agagccaagtggggagaatcagattctgtagagctttgttcatc-gatctaaggtaagggtgagactatc 41285062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Complemental strand, 45186490 - 45186461
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  45186490 tttgttcatctgaattaaggtaagggtgag 45186461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 46626024 - 46625987
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  46626024 tctgaattaagataagggtgagactaactctcaatgat 46625987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 10895786 - 10895818
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||| ||||||||||||||||||||||||    
T  10895786 tgaattaacgtaagggtgagactatctctcaat 10895818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 14265178 - 14265234
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 205  Q
    ||||||||||||||| |||||  |||||||| ||| |||||||||||| ||| ||||    
T  14265178 tataattctgattttagtttaacatagttctggttaaaattgggaatttgggtttag 14265234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 16677355 - 16677323
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||| ||||||||||||||||||||||||||    
T  16677355 tgaattcaggtaagggtgagactatctctcaat 16677323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 17651591 - 17651559
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||| ||||||||||||||||||||||||||    
T  17651591 tgaattcaggtaagggtgagactatctctcaat 17651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 44190190 - 44190242
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||| || |||||    
T  44190190 attgtagagctttgttcgtctaaattaaggtaatggtgaggctaactttcaat 44190242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 186 - 472
Target Start/End: Original strand, 16277366 - 16277652
Alignment:
Q  186 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16277366 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 16277465  T
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16277466 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaaattggtttttctgggtgaaaattgtgcagaaatcgcaacagcaagggaaaa 16277565  T
Q  386 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  16277566 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagcttagttttcgccattagcgaaattgcccagtga 16277652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 186 - 472
Target Start/End: Original strand, 53386976 - 53387262
Alignment:
Q  186 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53386976 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 53387075  T
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53387076 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaaattggtttttctgggtgaaaattgtgcagaaatcgtaacagtaagggaaaa 53387175  T
Q  386 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  53387176 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattcgctcagttttcgccattagcgaaattgtccagtga 53387262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 15535176 - 15534947
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15535176 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggtta 15535077  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| ||||||    
T  15535076 ggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttc 15534977  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  15534976 ctatcaaatttggggtttgggtggatgaaa 15534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 36038865 - 36038636
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36038865 tgaattcaggtaagggtgagactatctctcaatggtaatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggtta 36038766  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||    
T  36038765 ggtttttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttc 36038666  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  36038665 ctatcaaatttggggtttgggtggatgaaa 36038636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 17 - 334
Target Start/End: Complemental strand, 33849894 - 33849568
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  33849894 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccagatgaagagaatcagatttgtagagctttgttcatctgaattaaggta 33849795  T
Q  117 agggtgagactatctctcaatgataatggtt-atataattctgattttggtttagaatagttct------agttga--aattgggaattgggggttaggt 207  Q
    |||||||  ||| ||  |||||||  | ||| |||||||||||||| || ||   || |||| |      | |||   ||||||||||||||||||||||    
T  33849794 agggtgatgctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggt 33849695  T
Q  208 tttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttccta 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| |||||||| |||||||||    
T  33849694 tttgggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcatgttgtagaataaacataggttgagtttccta 33849595  T
Q  308 tcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||| |||||||    
T  33849594 tcaaatttggggtttgggtggatgaaa 33849568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 112 - 334
Target Start/End: Original strand, 49546949 - 49547170
Alignment:
Q  112 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||     
T  49546949 aggtaagggtgagactatctctcaatgataatggttatataattctgatcttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 49547048  T
Q  212 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 311  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||    
T  49547049 ggagtacga-tcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaa 49547147  T
Q  312 atttggggtttgggtagatgaaa 334  Q
    ||||||||||||||| |||||||    
T  49547148 atttggggtttgggtggatgaaa 49547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 264 - 472
Target Start/End: Complemental strand, 35660782 - 35660573
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 362  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||| ||||||    
T  35660782 aattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttttggtgaaaaatgtgca 35660683  T
Q  363 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaat 462  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||| ||| | ||||  |||||||||||||    
T  35660682 gaaatcgtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattcgctaactttttgccattagcgaaat 35660583  T
Q  463 tgcccagtga 472  Q
    ||| ||||||    
T  35660582 tgcacagtga 35660573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 264 - 472
Target Start/End: Original strand, 19434817 - 19435025
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||| |||||||||| |||||||    
T  19434817 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatgaaatttgagttttttgggtgaaaaatgtgcag 19434916  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||| | |||||||||||||||| |||| |||||| ||||| | | ||||||| |||||||||||||||   | ||| | ||||||||||||    
T  19434917 aaatcgtaacagtaggggaaaaactcgctagaagtttgctattggcgaatccctctgtaacaatttcgctattagctacctgttcgctattagcgaaatt 19435016  T
Q  464 gcccagtga 472  Q
    || ||||||    
T  19435017 gcacagtga 19435025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 264 - 439
Target Start/End: Complemental strand, 14549544 - 14549368
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt-ggtttttctgggtgaaaattgtgca 362  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  14549544 aattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgca 14549445  T
Q  363 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagc 439  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||| ||||| | | ||||||| ||||||||||||||    
T  14549444 gaaatcgtaacagtaggggaaaaactcgctagaagttctctattggcgaatccctctgtaacaatttcgctattagc 14549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 45006086 - 45005980
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45006086 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagatttgtagagctttgttcatctgaattaaggta 45005987  T
Q  117 agggtga 123  Q
    |||||||    
T  45005986 agggtga 45005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 264 - 412
Target Start/End: Complemental strand, 16296765 - 16296617
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||| |||||||||| |||||||    
T  16296765 aattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagattaaattttggttttttgggtgaaaaatgtgcag 16296666  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaa 412  Q
    |||| ||||||| |||||||||||||||||| ||||||||||| |||||    
T  16296665 aaattgtaacagtaagggaaaaactcgctagaagttcgctattggcgaa 16296617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 38979861 - 38980007
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaa-ttgtagagctttgttcatctgaattaaggt 115  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  38979861 acatcagttttgggagaagacaagagaaagcaagagaaccaagggagagccaggtgaagaaaatcataatttgtagagctttgttcatctgaattaaggt 38979960  T
Q  116 aagggtgagactatctctcaatgataat-ggttatataattctgatt 161  Q
    ||||||||| ||| ||  |||||||  | | ||||||||||||||||    
T  38979961 aagggtgaggctaacttgcaatgattttagtttatataattctgatt 38980007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 28386185 - 28386069
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28386185 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 28386086  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  28386085 ggtttgggtggatgaaa 28386069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 32490812 - 32490656
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||  ||||||||||| ||||||||||||| ||||| |  |||||||||||||||    
T  32490812 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaatagtaatggttatacaattctgattttgatttagcaaggttctagttgaaatt 32490714  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatg 249  Q
    |||||||||||||||||||||  |||||||||| ||| ||| || ||||||||| |||||    
T  32490713 gggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatg 32490656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 15344863 - 15344776
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15344863 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 15344776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 15415862 - 15416031
Alignment:
Q  90 agagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaa 187  Q
    |||||||||||||||  |||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||| ||||| ||  ||||||||||||     
T  15415862 agagctttgttcatc--aattcaaggtaagggtgagactaactctcaatgataatagttctatacttctgattttgatttagcaagggttctagttgaat 15415959  T
Q  188 ttgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    |||||| ||||||||||||||||  || ||||||| ||| |||||||||||||||| ||||| |||| ||||||    
T  15415960 ttgggatttgggggttaggtttt--gattatgatttttgaattgaaaagtgtagaatccatggcaatagtgtta 15416031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 12611839 - 12611752
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  12611839 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 12611752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 15447501 - 15447586
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  15447501 gaaaagtgcagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttgctaacaaatttg 15447586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 18230682 - 18230561
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||||||| |||   ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  18230682 tgatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgg 18230583  T
Q  318 ggtttgggtagatgaaatttgg 339  Q
    | |||| || ||||||| ||||    
T  18230582 gatttgtgttgatgaaaattgg 18230561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 23802528 - 23802613
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23802528 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 86 - 261
Target Start/End: Original strand, 16370700 - 16370872
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagtt 183  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||| | | |||| ||||||||||| ||||| ||  |||||||||    
T  16370700 ttgtagagctttgttcatc--aattcaaggtaagggtgagactaactctcaatgataatag-tgtatacttctgattttgatttagcaagggttctagtt 16370796  T
Q  184 gaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    ||| |||| ||||||||||||||||||  || ||||||| ||| |||||| ||||||||||| ||| |||| ||||||    
T  16370797 gaatttggaaattgggggttaggtttt--gattatgatttttgaattgaagagtgtagaaactatggcaatggtgtta 16370872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 51463152 - 51463239
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||    
T  51463152 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggtaaagttttctaacaaatttggg 51463239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 15318969 - 15318849
Alignment:
Q  111 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaa-ttgggggttaggttt 209  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||||  | ||||||||||||||||||||| ||| ||||||||||     
T  15318969 aaggtaagggtgagactatctctcaatgatattggttctacaattctgattttgatttaacaaagttctagttgaaattgggaatttgcgggttaggttc 15318870  T
Q  210 tgggagtatgattcttggattga 232  Q
    |   ||||||||| |||||||||    
T  15318869 t--aagtatgatttttggattga 15318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 15069830 - 15069727
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt--ggtttagaatagttctagttgaaa 187  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||| || |||||||| |||||||||||||  ||||||| |||||| |||| ||||    
T  15069830 agagttttgttcatca-aattaaggtaagggtgagactatctctcaataatgatggttatgtaattctgatttttgggtttagcatagttatagtagaaa 15069732  T
Q  188 ttggg 192  Q
    |||||    
T  15069731 ttggg 15069727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 15076430 - 15076323
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt--ggtttagaatagttctagttgaaa 187  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||| || |||||||| |||||||||||||  | ||||| ||||||||||| ||||    
T  15076430 agagttttgttcatca-aattaaggtaagggtgagactatctctcaataatgatggttatgtaattctgatttttggatttagcatagttctagtagaaa 15076332  T
Q  188 ttgggaatt 196  Q
    || ||||||    
T  15076331 tttggaatt 15076323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 406 - 472
Target Start/End: Original strand, 630162 - 630228
Alignment:
Q  406 tagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | || ||||||||||||||||||    
T  630162 tagcgaaactccctgtaactatttcgctattagctcatttttcgctatcagcgaaattgcccagtga 630228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 10694399 - 10694475
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  10694399 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 10694475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 13043893 - 13043980
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||  |||||| | ||| | |||||||||||||    
T  13043893 gaaaagtgtagaaaccatagtaattgtgttaagaattgatgttcaggttgtagaataacaataggtgatgttccttatcaaatttggg 13043980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 9638881 - 9638833
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9638881 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 9638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 10908165 - 10908241
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||   ||||||| |||||||||    
T  10908165 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttgatgaaatt 10908241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 40620430 - 40620354
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  |||| |||| |||||||| |||||||| ||||||||||| ||||||| |||||||||    
T  40620430 taagaattgaagttcaggccgtaggataaacataggttgagtttcctctcaaatttgggatttgggttgatgaaatt 40620354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 45005886 - 45005827
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcagg 277  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||    
T  45005886 tgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgatgttcagg 45005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 6512694 - 6512645
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| ||| ||||||||||||||||||||||| ||| ||||||||    
T  6512694 gtagagcttcgttgatctgaattaaggtaagggtgaggctaactctcaat 6512645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 17143304 - 17143263
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  17143304 ttgttcgtctgaattaaggtaagggtgagactaactctcaat 17143263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 8834965 - 8834921
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||    
T  8834965 ttgttcatttgaattaaggtaagggtgaggctaactctcaatgat 8834921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 14035843 - 14035765
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||| |||  |||||||||| | |||||| ||||||||||| ||  ||||||||||||||||||| |||||||||||    
T  14035843 agagccaagtggggagaatcagattctgtagaactttgttcatc-gatctaaggtaagggtgagactaactctcaatgat 14035765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 14477526 - 14477436
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 355  Q
    ||||||||||||| | |||||||||  ||| || | ||||||| ||||||||||  ||||||||| ||||| ||||  ||||||||||||||    
T  14477526 aattgatgttcagattgtagaataacaataagtaatgtttcctgtcaaatttggaatttgggtagttgaaa-ttggggtttctgggtgaaaa 14477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 14912160 - 14912107
Alignment:
Q  86 ttgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||||||||||||||| ||  |||||||||||| |||||| |||||||||||    
T  14912160 ttgtagagctttgttcatc-gatctaaggtaagggttagactaactctcaatgat 14912107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 21188915 - 21189024
Alignment:
Q  62 agagccaggtgaagagaatcagaatt-gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctga 159  Q
    ||||||| |||  |||||||||| || ||||||||||||||||| ||  |||||||||||||||  || || |||||||| || | ||||||||||||||    
T  21188915 agagccaagtggggagaatcagattttgtagagctttgttcatc-gatctaaggtaagggtgaggttaactttcaatgattatagtttatataattctga 21189013  T
Q  160 ttttggtttag 170  Q
    || || |||||    
T  21189014 ttctgatttag 21189024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 10783416 - 10783445
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  10783416 tttgttcatctgaattaaggtaagggtgag 10783445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 10972067 - 10972096
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  10972067 tttgttcatctgaattaaggtaagggtgag 10972096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 13888708 - 13888667
Alignment:
Q  99 ttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  13888708 ttcatctaaattaaggtaagggtgaggctaactctcaatgat 13888667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 14931105 - 14931154
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||| || ||||||||||||||||||| ||| ||||||||    
T  14931105 gtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaat 14931154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 15245282 - 15245241
Alignment:
Q  99 ttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  15245282 ttcatctaaattaaggtaagggtgaggctaactctcaatgat 15245241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 56114762 - 56114823
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  56114762 taaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 56114823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 123
Target Start/End: Complemental strand, 16485699 - 16485671
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtga 123  Q
    |||||||||||||||||||||||||||||    
T  16485699 tttgttcatctgaattaaggtaagggtga 16485671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 18462917 - 18462853
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 328  Q
    ||||||||||||| | |||||| ||  |||||| | ||||||| ||||||||||| |||||||||    
T  18462917 aattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttgggatttgggtag 18462853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 24046465 - 24046541
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||  || ||||||||| ||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  24046465 tttgttcatcaaaactaaggtaagtgtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 24046541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 103 - 334
Target Start/End: Original strand, 41875588 - 41875819
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggt 202  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41875588 tctgaattaaggtaagggtgagactctctctcattgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggt 41875687  T
Q  203 taggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 302  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||    
T  41875688 taggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtt 41875787  T
Q  303 tcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||||| |||||||    
T  41875788 tcctatcaaatttggggtttgggtggatgaaa 41875819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 105 - 334
Target Start/End: Complemental strand, 9777160 - 9776931
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggtta 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  9777160 tgaattcaggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggtta 9777061  T
Q  205 ggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttc 304  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| | ||||||||| |||||||||||||||    
T  9777060 ggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattatgttaagaatcgatgttcagattgtagaataaacataggttaagtttc 9776961  T
Q  305 ctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||| |||||||    
T  9776960 ctatcaaatttggggtttgggtggatgaaa 9776931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 218 - 472
Target Start/End: Complemental strand, 18419393 - 18419139
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||     
T  18419393 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttga 18419294  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
    | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18419293 gatttgggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 18419194  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||||||||| || ||||| | || | ||||||||||||||||    
T  18419193 ctgtaactatttcgctattagcccacttttcgctatcaacgaaattgcccagtga 18419139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 262 - 472
Target Start/End: Original strand, 24668312 - 24668522
Alignment:
Q  262 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24668411  T
Q  362 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaa 461  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||     
T  24668412 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24668511  T
Q  462 ttgcccagtga 472  Q
    |||||||||||    
T  24668512 ttgcccagtga 24668522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 262 - 472
Target Start/End: Original strand, 24738081 - 24738291
Alignment:
Q  262 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24738180  T
Q  362 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaa 461  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||     
T  24738181 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24738280  T
Q  462 ttgcccagtga 472  Q
    |||||||||||    
T  24738281 ttgcccagtga 24738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 262 - 472
Target Start/End: Original strand, 24750850 - 24751060
Alignment:
Q  262 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24750949  T
Q  362 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaa 461  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||     
T  24750950 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24751049  T
Q  462 ttgcccagtga 472  Q
    |||||||||||    
T  24751050 ttgcccagtga 24751060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 103 - 334
Target Start/End: Original strand, 37804068 - 37804299
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggt 202  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  37804068 tctgaattaaggtaagggcgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagtagaaattgggaattgggggt 37804167  T
Q  203 taggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 302  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| ||||    
T  37804168 taggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtt 37804267  T
Q  303 tcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||||| |||||||    
T  37804268 tcctatcaaatttggggtttgggtggatgaaa 37804299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 262 - 403
Target Start/End: Original strand, 24594218 - 24594359
Alignment:
Q  262 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttttgggtgaaaattgtgc 24594317  T
Q  362 agaaatcgtaacagcaagggaaaaactcgctaggagttcgct 403  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24594318 agaaatcgtaacagcaagggaaaaactcgctaggagttcgct 24594359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 264 - 472
Target Start/End: Original strand, 36508901 - 36509109
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||| |||| ||    
T  36508901 aattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagatcaaatttgggttttttgggtgaaaaatgtgtag 36509000  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||| | ||||| |||||||||| ||||||||||| ||||| | | ||||||| ||||||||||||||| | ||||| | |||||| |||||    
T  36509001 aaatcgtaacagtaggggaagaactcgctagaagttcgctattggcgaatccctctgtaacaatttcgctattagctaacttttcgctattagcaaaatt 36509100  T
Q  464 gcccagtga 472  Q
    ||| |||||    
T  36509101 gcctagtga 36509109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 43242418 - 43242525
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43242418 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtaaagctttgttcatctgaattaaggta 43242517  T
Q  117 agggtgag 124  Q
    ||||||||    
T  43242518 agggtgag 43242525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 27868685 - 27868801
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27868685 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 27868784  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  27868785 ggtttgggtggatgaaa 27868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 33472674 - 33472790
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33472674 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 33472773  T
Q  318 ggtttgggtagatgaaa 334  Q
    | ||||||| |||||||    
T  33472774 gatttgggtggatgaaa 33472790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 90 - 252
Target Start/End: Complemental strand, 7786249 - 7786090
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||| ||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |  |||| ||||||||||    
T  7786249 agagttttgttcatca-aatcaaggtaagggtgagactaactctcaatgataatggttatacaattctaattttggtttagcagggttccagttgaaatt 7786151  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgaca 252  Q
    |||||||||||||||||||||  |||||||||| ||| ||| || ||||||||| ||||||||    
T  7786150 gggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatgaca 7786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 240
Target Start/End: Complemental strand, 26707444 - 26707296
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||| |  |||||||||||||||    
T  26707444 agagctttgttcatcaaaatcaaggtaagggtgagactaactctcaatggtaatggttatacaactctgattttggtttagcaaggttctagttgaaatt 26707345  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgta 240  Q
    |||||||||| ||||||||||  |||||||||| ||| ||| || ||||||    
T  26707344 gggaattgggagttaggtttt--gagtatgatttttgaattaaatagtgta 26707296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 240
Target Start/End: Complemental strand, 26977178 - 26977030
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaatt 189  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||| |  |||||||||||||||    
T  26977178 agagctttgttcatcaaaatcaaggtaagggtgagactaactctcaatggtaatggttatacaactctgattttggtttagcaaggttctagttgaaatt 26977079  T
Q  190 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgta 240  Q
    |||||||||| ||||||||||  |||||||||| ||| ||| || ||||||    
T  26977078 gggaattgggagttaggtttt--gagtatgatttttgaattaaatagtgta 26977030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 471
Target Start/End: Original strand, 16604759 - 16604928
Alignment:
Q  302 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 401  Q
    ||||||||||||||| | |||| ||||||||||||||| |||| |||||||||| |||| ||||||||||| |||| |||||||||||| ||| ||||||    
T  16604759 ttcctatcaaatttgagatttgagtagatgaaatttggattttttgggtgaaaaatgtgaagaaatcgtaatagcaggggaaaaactcgatagaagttcg 16604858  T
Q  402 ctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtg 471  Q
    ||||| ||||||  | ||||||| || |||||||||||    ||||| |||||||||||||||| |||||    
T  16604859 ctattggcgaaatcctctgtaacaatctcgctattagcaagattttcgccattagcgaaattgcacagtg 16604928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 24617174 - 24617248
Alignment:
Q  398 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  24617174 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtga 24617248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 24713405 - 24713479
Alignment:
Q  398 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  24713405 ttcgcttttagcgaaactccctgtaactatttcgctattagctcaatttttgccattagcgaaattgcccagtga 24713479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 24746433 - 24746507
Alignment:
Q  398 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  24746433 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtga 24746507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 22413015 - 22412930
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  |||||||||||||||||||||| | || |||||||||||||||||||||||| ||| ||||||||    
T  22413015 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgtttatgttgtagaataatcataggttaagttttctaacaaatttg 22412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 17021914 - 17022010
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttgg-tttagaatagttctagttgaaattgggaattgggggttag 205  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||| |||||||| ||| |||||||||||| ||| ||||    
T  17021914 taaggtaagggtgagactatctctcaatagtaatggttgtataattctgattttggatttagcatagttctggttaaaattgggaatttgggtttag 17022010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 17011626 - 17011550
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  17011626 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 17011550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 265936 - 265860
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||| | |||||||||    
T  265936 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttggattgatgaaatt 265860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 21504037 - 21503953
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 344  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  21504037 taagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 21503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 21553390 - 21553541
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggtttagaatag--ttctagttgaaattgggaattgggggttagg 206  Q
    ||||||||||||||| ||| ||||||||| | || || |||||||||||||||||| ||||| |  |  |||| ||| |||||||||||||||  |||||    
T  21553390 taaggtaagggtgaggctaactctcaatggttatagtctatataattctgattttgttttagcaaggggttctggtt-aaattgggaattgggt-ttagg 21553487  T
Q  207 ttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    |||||    | ||||| ||| ||||||||||||||||||||||||||||||||||    
T  21553488 ttttgatcat-tgatttttgaattgaaaagtgtagaaaccatgacaattgtgtta 21553541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 29448738 - 29448662
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | |||| || |||||||||    
T  29448738 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaatt 29448662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 30138244 - 30138295
Alignment:
Q  267 tgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  30138244 tgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggg 30138295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 23111185 - 23111227
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  23111185 tttgttcatctaaattaaggtaagggtgagactatctctcaat 23111227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 21398956 - 21399029
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 337  Q
    ||||||||||||||| ||||||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggtagatgagattt 21399029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 22777048 - 22777097
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  22777048 gtagagcttcgttcatctgaattaaggtaagggtgaggctaactctcaat 22777097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 30344621 - 30344674
Alignment:
Q  21 cagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaa 74  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||| |||||    
T  30344621 cagttttgggataaaattagagaaagcaagagaaccaagggagagccaagtgaa 30344674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 10817886 - 10817846
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagacta 128  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  10817886 gtagagcttcgttcatctgaattaaggtaagggtgagacta 10817846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 18407937 - 18407971
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  18407937 tctgaattaaggtaagggtgagactatctctcaat 18407971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 19512448 - 19512414
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  19512448 tctgaattaaggtaagggtgagactatctctcaat 19512414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 28370048 - 28370082
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  28370048 tctgaattaaggtaagggtgagactatctctcaat 28370082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 36461117 - 36461034
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  36461117 tgtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 36461034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 8952019 - 8952068
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  8952019 gtagagcttcgttcatctaaattaaggtaagggtgaggctaactctcaat 8952068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 17875952 - 17875897
Alignment:
Q  263 gaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||| |||||||||  |||||| | ||||| |||||||||||||    
T  17875952 gaattgatgttcaggttgtagaataacaataggtgatgtttcttatcaaatttggg 17875897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 21980045 - 21980127
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggttta 169  Q
    ||||||||||||||||||  ||| ||||||||||||||| | | ||||||||||| || | || |||||||||||||||| ||||    
T  21980045 tgtagagctttgttcatc--aatctaaggtaagggtgaggccaactctcaatgattatagtttgtataattctgattttgattta 21980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 10036191 - 10036140
Alignment:
Q  73 aagagaatcagaatt-gtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  10036191 aagagaaccagaattcgtagagattt-ttcatctgaattaaggtaagggtgag 10036140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 15193124 - 15193152
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  15193124 ttgttcatctgaattaaggtaagggtgag 15193152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 17813533 - 17813473
Alignment:
Q  111 aaggtaagggtgagactatctctcaatgataat-ggttatataa-ttctgattttggttta 169  Q
    |||||||||||||||||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  17813533 aaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 17813473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 20313169 - 20313089
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 344  Q
    |||||||||||| ||  |||||||| ||||| || ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  20313169 aattgatgttcaagttatagaataaacatagattgagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 20313089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 21495917 - 21495889
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  21495917 ttgttcatctgaattaaggtaagggtgag 21495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 21889608 - 21889580
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  21889608 ttgttcatctgaattaaggtaagggtgag 21889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 218 - 472
Target Start/End: Original strand, 22130136 - 22130390
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22130136 tgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgg 22130235  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
    | ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22130236 gatttgggtagatgaaatttggtttttttgggtgaaaaatatgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 22130335  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||| ||||| | || ||||||| ||||||||||    
T  22130336 ctgtaactatttcgctattagctcaattttcgctatcagcgaaactgcccagtga 22130390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 334
Target Start/End: Complemental strand, 297507 - 297181
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  297507 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagatttgtagagctttgttcatctgaattaaggta 297408  T
Q  117 agggtgagactatctctcaatgataatggtt-atataattctgattttggtttagaatagttct------agttga--aattgggaattgggggttaggt 207  Q
    |||||||| ||| ||  |||||||  | ||| |||||||||||||| || ||   || |||| |      | |||   ||||||||||||||||||||||    
T  297407 agggtgaggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggt 297308  T
Q  208 tttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttccta 307  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  297307 tttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttccta 297208  T
Q  308 tcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||| |||||||    
T  297207 tcaaatttggggtttgggtggatgaaa 297181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 149 - 472
Target Start/End: Original strand, 23194554 - 23194876
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaa-agtgtagaaacca 247  Q
    |||||||||||||||||||||   ||||||| ||  ||||| |||| | ||| ||||||||||    |  |||| |||||| |||| ||||| ||||||     
T  23194554 tataattctgattttggtttaacgtagttctggtaaaaatttggaaattgggtttaggttttgattcttagatttttggatggaaagagtgtggaaacct 23194653  T
Q  248 tgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctg 347  Q
    ||  |||  ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  23194654 tgtaaatgatgtta-gaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaatttggtttttttg 23194752  T
Q  348 ggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagtttt 447  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  23194753 ggtaaaaattctgcagaaatcgtaacagcaagggaaaaactcgctagtagttcgctattagcgaaact-cctgtaactatttcgctattagctcactttt 23194851  T
Q  448 caccattagcgaaattgcccagtga 472  Q
    | |||||||||||||||||||||||    
T  23194852 cgccattagcgaaattgcccagtga 23194876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 218 - 472
Target Start/End: Original strand, 45574130 - 45574377
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||| |||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  45574130 tgatttttgaattgaaaagtgcagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg- 45574228  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
          ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45574229 ------ggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 45574322  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||||||||||||||||||||| ||||| | || ||||||||||||| ||||    
T  45574323 ctgtaactatttcgctattagctcacttttcgctatcagcgaaattgcccggtga 45574377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 264 - 472
Target Start/End: Original strand, 7052171 - 7052380
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 362  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||| ||||||    
T  7052171 aattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgca 7052270  T
Q  363 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaat 462  Q
    ||||||||||||| | |||||||||||||||| ||||||||||| ||||| | | ||||||| ||||||||||||||| | ||||| |||||||||||||    
T  7052271 gaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatcactctgtaacaatttcgctattagctaacttttcgccattagcgaaat 7052370  T
Q  463 tgcccagtga 472  Q
    ||| ||||||    
T  7052371 tgcacagtga 7052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 45308299 - 45308154
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45308299 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagaaaatcagaattgtagagctttgttcatctgaattaaggta 45308200  T
Q  117 agggtgagactatctctcaatgataat-ggttatataattctgatt 161  Q
    |||||||| ||| ||  |||||||  | | ||||||||||||||||    
T  45308199 agggtgaggctaacttgcaatgattttagtttatataattctgatt 45308154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 264 - 404
Target Start/End: Original strand, 24723618 - 24723758
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||| |||||||    
T  24723618 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaatttgggttttttgggtgaaaaatgtgcag 24723717  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgcta 404  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  24723718 aaatcgtaacagcaggggaaaaactcgctagaagttcgcta 24723758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 2331970 - 2332077
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2331970 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcataattgtagagctttgttcatctgaattaaggta 2332069  T
Q  117 agggtgag 124  Q
    ||||||||    
T  2332070 agggtgag 2332077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 264 - 414
Target Start/End: Complemental strand, 8306498 - 8306349
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||| |||||||    
T  8306498 aattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaattttggttttttgggtgaaaa-tgtgcag 8306400  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 414  Q
    |||||||||||| | |||||||||| ||||||||||||||||| |||||||    
T  8306399 aaatcgtaacagtaggggaaaaacttgctaggagttcgctattggcgaaac 8306349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 28313290 - 28313174
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||     
T  28313290 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttga 28313191  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  28313190 ggtttgggtggatgaaa 28313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 13880660 - 13880745
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13880660 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 13880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 24476399 - 24476279
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaat 188  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||| ||||||||||| |||||    
T  24476399 agagttttgttcatca-aattaaggtaagggtgagactatctctcaataatgatggttatgtaattctgattttgggtttagcatagttctagtagaaat 24476301  T
Q  189 tgggaattgggggttaggtttt 210  Q
    |||||||| ||| |||| ||||    
T  24476300 tgggaatttgggtttagatttt 24476279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 25091393 - 25091505
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagtt 183  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||||| ||||||| |||||||||||     
T  25091393 attgtagaacgttgttcgtctgaattaaggtaagggtgagactatctctcaataataacggttatgtgattctgattttgggtttagcatagttctagta 25091492  T
Q  184 gaaattgggaatt 196  Q
    | |||||||||||    
T  25091493 gtaattgggaatt 25091505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 21526767 - 21526933
Alignment:
Q  92 agctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattg 190  Q
    |||||||||||||  ||||||||||||||||||| || ||||||||||| || ||  |||| ||||||||||||||||| ||| ||||||||||||||||    
T  21526767 agctttgttcatca-aattaaggtaagggtgagaataactctcaatgatgatagtg-tatacttctgattttggtttagcaatggttctagttgaaattg 21526864  T
Q  191 ggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
     |||||||||||||||||||  || ||||||| ||| ||| || |||| |||| ||||| |||| ||||||    
T  21526865 agaattgggggttaggtttt--gattatgatttttgaattaaagagtgaagaatccatggcaatagtgtta 21526933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 46197899 - 46197975
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  46197899 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 46197975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 23194431 - 23194477
Alignment:
Q  22 agttttgggagaaaacaagagaaagcaagagaaccaagggagagcca 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23194431 agttttgggagaaaacaagagaaagcaagagaaccaagggagagcca 23194477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 17901960 - 17902032
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||    
T  17901960 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaatt 17902032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 6834060 - 6833988
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||| ||| |||||||||    
T  6834060 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttggttgatgaaatt 6833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 21180232 - 21180339
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgat 160  Q
    ||||||| |||  |||||||||| | |||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| || | | ||| ||||||||    
T  21180232 agagccaagtggggagaatcagattctgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgattatagatgtatgattctgat 21180330  T
Q  161 tttggttta 169  Q
    |||| ||||    
T  21180331 tttgattta 21180339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 38056853 - 38056893
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggt 326  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38056853 taatcataggttaagtttcctatcaaatttggggtttgggt 38056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 50001374 - 50001298
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  50001374 taagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttgatgaaatt 50001298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 21188191 - 21188281
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 355  Q
    ||||||||||||||| |||||||||  ||| || | ||||||||||||||||||| ||||||||| || |||| || |||| ||||||||||    
T  21188191 aattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttt-tgggtgaaaa 21188281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 20437009 - 20437051
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  20437009 tttgttcatctaaattaaggtaagggtgagactatctctcaat 20437051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 8276170 - 8276218
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  8276170 taatcataggttaagtttcctatcaaatttggagttttggtggatgaaa 8276218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 8686096 - 8686037
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttata 150  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||| |||||||||||    
T  8686096 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaatggtaatggttata 8686037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 29763806 - 29763862
Alignment:
Q  280 gtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  29763806 gtagaataaacataagttgagtttcctatcaaatttgggatttgggtggatgaaatt 29763862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 52984299 - 52984247
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||| ||||||||    
T  52984299 attgtagagctttgttcatctaaattaaggtaatggtgaggctaactctcaat 52984247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 20058561 - 20058522
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  20058561 attgtagagctttgttcatctaaattaaggtaagggtgag 20058522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 21239201 - 21239276
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 339  Q
    ||||| ||||||| | |||||||||||||||||  ||||| ||||||||||| || ||||||| ||||||| ||||    
T  21239201 aattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttaggatttgggttgatgaaaattgg 21239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 11158155 - 11158118
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11158155 tctgaattaaggtaagggtgagactaactctcaatgat 11158118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 35064611 - 35064575
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||| ||||||||||||||||||    
T  35064611 gtagagctttgttcatctaaattaaggtaagggtgag 35064575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 21986077 - 21986124
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaatt 196  Q
    |||||||||||||||||||||  |||||||| ||| ||||||||||||    
T  21986077 tataattctgattttggtttaacatagttctggttaaaattgggaatt 21986124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 10811778 - 10811816
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataat 143  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  10811778 tgaattcaggtaagggtgagactatctctcaataataat 10811816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 18712861 - 18712827
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||| ||||||||||||||||||||    
T  18712861 tctgaattaaggtatgggtgagactatctctcaat 18712827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 137
Target Start/End: Complemental strand, 32651630 - 32651600
Alignment:
Q  107 aattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||    
T  32651630 aattaaggtaagggtgagactatctctcaat 32651600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 18271395 - 18271345
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||||||||    
T  18271395 ttgtagagctttgttcatc--aattcaaggtaagggtgagactaactctcaat 18271345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 18276049 - 18275999
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||||||||    
T  18276049 ttgtagagctttgttcatc--aattcaaggtaagggtgagactaactctcaat 18275999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 18824689 - 18824640
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||| || ||||||||||||||||||| ||| ||||||||    
T  18824689 gtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaat 18824640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Complemental strand, 19336818 - 19336789
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  19336818 tttgttcatctgaattaaggtaagggtgag 19336789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 125
Target Start/End: Complemental strand, 41315283 - 41315254
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgaga 125  Q
    ||||||||||||||||||||||||||||||    
T  41315283 ttgttcatctgaattaaggtaagggtgaga 41315254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 5381679 - 5381651
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  5381679 ttgttcatctgaattaaggtaagggtgag 5381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 21986026 - 21986054
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  21986026 ttgttcatctgaattaaggtaagggtgag 21986054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 31926438 - 31926466
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  31926438 ttgttcatctgaattaaggtaagggtgag 31926466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 103 - 334
Target Start/End: Complemental strand, 12943186 - 12942955
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12943186 tctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggt 12943087  T
Q  203 taggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 302  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| | |||||||||  ||||||| ||||    
T  12943086 taggtttttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtt 12942987  T
Q  303 tcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||||| |||||||    
T  12942986 tcctatcaaatttggggtttgggtggatgaaa 12942955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 110 - 334
Target Start/End: Original strand, 28288510 - 28288733
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28288510 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 28288609  T
Q  210 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatc 309  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||    
T  28288610 t-ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatc 28288708  T
Q  310 aaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||| |||||||    
T  28288709 aaatttggggtttgggtggatgaaa 28288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 7430738 - 7430631
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7430738 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 7430639  T
Q  117 agggtgag 124  Q
    ||||||||    
T  7430638 agggtgag 7430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 13765288 - 13765172
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13765288 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 13765189  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  13765188 ggtttgggtggatgaaa 13765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 23956804 - 23956688
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23956804 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23956705  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  23956704 ggtttgggtggatgaaa 23956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 228 - 334
Target Start/End: Original strand, 31021842 - 31021948
Alignment:
Q  228 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 327  Q
    |||||||||||||||||| ||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31021842 attgaaaagtgtagaaactatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggta 31021941  T
Q  328 gatgaaa 334  Q
    |||||||    
T  31021942 gatgaaa 31021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 302 - 472
Target Start/End: Complemental strand, 19234981 - 19234812
Alignment:
Q  302 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 401  Q
    ||||||||||||||||| |||| ||||||||||||||  |||| |||||||||| |||||||||||||||||| || |||||||||||||||| ||||||    
T  19234981 ttcctatcaaatttgggatttgagtagatgaaatttgagttttttgggtgaaaaatgtgcagaaatcgtaacaacaggggaaaaactcgctagaagttcg 19234882  T
Q  402 ctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||| ||||||  | ||||||| ||||||| | |||| ||  |||| |||||||||||||||| ||||||    
T  19234881 ctattggcgaaatcctctgtaacaatttcgcaaatagc-catatttcgccattagcgaaattgcacagtga 19234812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 9184979 - 9185150
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataa-ttctgattttggtttagaatagttctagttgaaat 188  Q
    |||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||    
T  9184979 agagttttgttcatca-aatcaaggtaagggtgagactatctctcaatgataatggttatataatttctgattttggtttagcaaggttctagttgaaat 9185077  T
Q  189 t-gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    | || |||| | ||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||| | ||||||    
T  9185078 taggaaattagaggttaggtttt-ggagtatgatttttgaattaaaaagtgtagaatccatgacattagtgtta 9185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 611728 - 611641
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  611728 gaaaagtgtagaaaccatgacaattgtgttaggaattaatgttcaggtggtagaataatcataggttaagtttcctaacaaatttggg 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 23225968 - 23226066
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23225968 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 272 - 472
Target Start/End: Complemental strand, 35057430 - 35057231
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 370  Q
    ||||||| ||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||| |||| |||  |||||| ||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaatttggatttt-tgggtgaaaaagtgtttagaaattgt 35057332  T
Q  371 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcaccattagcgaaattgcccag 469  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||  | ||||||| ||||| ||| |||| ||| ||||| |||||||| ||||||| |||    
T  35057331 aacagc-aggggaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcactaatagc-cagattttcgccattagcaaaattgcacag 35057234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 18138596 - 18138497
Alignment:
Q  111 aaggtaagggtgagactatctctcaatgataatggttatataattctga-ttttggtttagaatagttctagttgaaattgggaattgggggttaggttt 209  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||    
T  18138596 aaggtaaaggtgagactatctctcaatgataatggttatataattctgatttttggtttagcatagttccagttgaaattgagaatt-ggggttaggttt 18138498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 20556156 - 20556243
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  20556156 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 20556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 25619023 - 25619106
Alignment:
Q  233 aaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25619023 aaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 25619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 23415846 - 23415728
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||| |||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  23415846 tgatttttgaattgaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 23415747  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  23415746 gatttgggttgatgaaatt 23415728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 14978665 - 14978739
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcc 305  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14978665 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcc 14978739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 27557604 - 27557486
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| ||||||||||||||||||||    ||||||||||| |||||| |||||||| ||||||||| |||||||| ||||| |||||||||||||    
T  27557604 tgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaataattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgg 27557505  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | |||| || |||||||||    
T  27557504 gatttgagtcgatgaaatt 27557486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 465
Target Start/End: Complemental strand, 13285634 - 13285442
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 370  Q
    ||||||| ||||||||||| || |||||||||||||||||||| ||| |||||   |||||||||||| |||| |||| | |||| |||| |||||||||    
T  13285634 ttcaggttgtagaataatcttaagttaagtttcctatcaaattagggatttggaatgatgaaatttgggtttt-tgggcgaaaaagtgtgtagaaatcgt 13285536  T
Q  371 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcaccattagcgaaattgc 465  Q
    |||||  || | |||||||||||| |||| |||||| ||||||  | ||||||| ||||||| | |||  ||| ||||| ||||||||||||||||    
T  13285535 aacag-tagcggaaaactcgctagaagtttgctattggcgaaatcctctgtaacaatttcgcgaatag-acagattttcgccattagcgaaattgc 13285442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 21470839 - 21470738
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaa 194  Q
    |||||| ||||||||||||||| ||||||||||||| ||||   ||||| |||||||||| ||||||| ||||||| |||||||| || |||||||||||    
T  21470839 ttgttcgtctgaattaaggtaatggtgagactatctttcaacattaatgattatataattttgattttgggtttagcatagttctggtagaaattgggaa 21470740  T
Q  195 tt 196  Q
    ||    
T  21470739 tt 21470738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 21477339 - 21477238
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaa 194  Q
    |||||| ||||||||||||||||||||||||||||| ||||   ||||| |||||||||||||||||| ||||||||||  || | || |||||||||||    
T  21477339 ttgttcgtctgaattaaggtaagggtgagactatctttcaacattaatgattatataattctgattttgggtttagaatgattatggtagaaattgggaa 21477240  T
Q  195 tt 196  Q
    ||    
T  21477239 tt 21477238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 15891723 - 15891799
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15891723 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 15891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 15900808 - 15900884
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15900808 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 15900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 29045158 - 29045086
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||||||||||||| |||||||||||||||||  ||||| |||||||||||||| |||| || |||||||||    
T  29045158 aattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgagttgatgaaatt 29045086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 254
Target Start/End: Complemental strand, 1588794 - 1588649
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggttta--gaatagttctagttgaaattgggaattgggggttagg 206  Q
    ||||||||||||||||||| ||||||||||| || || |||||||||||||| ||| ||||   ||  ||||||||| || |||||| ||| || |||||    
T  1588794 taaggtaagggtgagactaactctcaatgattatagtctatataattctgatgttgatttaacaaagggttctagtt-aatttgggatttgaggtttagg 1588696  T
Q  207 ttttgggagtat-gattcttggattgaaaagtgtagaaaccatgacaat 254  Q
    ||||  || ||| |||| ||| |||||||||||||||||||||||||||    
T  1588695 tttt--gattatagatttttgaattgaaaagtgtagaaaccatgacaat 1588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 25773607 - 25773516
Alignment:
Q  107 aattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt--ggtttagaatagttctagttgaaattgggaatt 196  Q
    |||||||||||| |||||||||||| ||||   ||||| |||||||| |||||||||  ||||||| |||||||| || |||||||||||||    
T  25773607 aattaaggtaagagtgagactatctttcaacattaatgattatataagtctgatttttgggtttagcatagttctggtagaaattgggaatt 25773516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 23839268 - 23839226
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  23839268 tttgttcatctaaattaaggtaagggtgagactatctctcaat 23839226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 24441729 - 24441680
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  24441729 gtagagcttcgttcatctaaattaaggtaagggtgagactaactctcaat 24441680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 15173607 - 15173683
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| ||||||   |||| |||| |||||||| |||||||||||||||||||| ||||| | |||||||||    
T  15173607 taagaattgaagttcagcctgtaggataaacataggttgagtttcctatcaaatttgggatttggattgatgaaatt 15173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 18659509 - 18659457
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||| |||| || ||||||||||||||||||||||| ||||||||    
T  18659509 attgtagagcttcgttcgtcagaattaaggtaagggtgagactaactctcaat 18659457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 19825667 - 19825715
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  19825667 taatcataggttaagtttcctatcaaatttggagtttaggtggatgaaa 19825715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 25348549 - 25348509
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataat 143  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  25348549 tctgaattaaggtaagggtgagactatctctcaataataat 25348509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 1418 - 1343
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||| ||||||||||||||||||||||  || ||||||||||| || | || |||||||||||||||| |||||    
T  1418 ttgttcgtctgaattaaggtaagggtgaggttaactctcaatgattatagtttgtataattctgattttgatttag 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 8377 - 8302
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||| ||||||||||||||||||||||  || ||||||||||| || | || |||||||||||||||| |||||    
T  8377 ttgttcgtctgaattaaggtaagggtgaggttaactctcaatgattatagtttgtataattctgattttgatttag 8302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 1254905 - 1254822
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  1254905 tgtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 1254822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 5833817 - 5833863
Alignment:
Q  270 tgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  5833817 tgttcaggttgtagaataatcatatgttaagtgtcctatcaaatttg 5833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 9187557 - 9187523
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  9187557 tctgaattaaggtaagggtgagactatctctcaat 9187523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 4477917 - 4477885
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||    
T  4477917 tgaattaaggtaagggtgagactatctctcaat 4477885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 18585577 - 18585519
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| |||||||||  ||| || | ||||| |||||||||||||    
T  18585577 taagaattgatgttcaggttgtagaataacaatatgtgatgtttcttatcaaatttggg 18585519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 14993674 - 14993611
Alignment:
Q  291 ataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 355  Q
    |||||| | ||||||| ||||||||||| ||||||||| ||||||| || |||| ||||||||||    
T  14993674 ataggtaatgtttcctgtcaaatttgggatttgggtagttgaaattggggtttt-tgggtgaaaa 14993611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 18315102 - 18315130
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  18315102 ttgttcatctgaattaaggtaagggtgag 18315130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 22797644 - 22797672
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  22797644 ttgttcatctgaattaaggtaagggtgag 22797672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 168; Significance: 8e-90; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 229 - 472
Target Start/End: Complemental strand, 10025 - 9782
Alignment:
Q  229 ttgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 328  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  10025 ttgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtag 9926  T
Q  329 atgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatt 428  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9925 atgaaatttgggttttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatt 9826  T
Q  429 tcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||||||| ||||| | || ||||||||| | ||||||    
T  9825 tcgctattagctcaattttcgctatcagcgaaatttctcagtga 9782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 162; Significance: 3e-86; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 231 - 472
Target Start/End: Original strand, 174232 - 174473
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 330  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  174232 gaaaagtgtagaaaccatgacaattgtgttaagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagatttgggtagat 174331  T
Q  331 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 430  Q
    |||||||||||||| | |||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| || |||||| |||||    
T  174332 gaaatttggtttttttaggtgaaaaatgtgtagaaatcgtaacaacaacggaaaaactcgctaggagttcgctattggcgaaaccccttgtaacaatttc 174431  T
Q  431 gctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||||||| | ||||| || ||||||||||||| ||||||    
T  174432 gctattagctaacttttcgcctttagcgaaattgctcagtga 174473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 87 - 254
Target Start/End: Original strand, 182026 - 182192
Alignment:
Q  87 tgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttg 184  Q
    ||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||  ||||||||||    
T  182026 tgtagagctttgttcatc--aattcaaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaaaggttctagttg 182123  T
Q  185 aaattgggaattgggggttaggttttgggagtatga-ttcttggattgaaaagtgtagaaaccatgacaat 254  Q
    |||||||||| |||||||||||||||  || ||||| || ||| ||| |||||||||||| ||||| ||||    
T  182124 aaattgggaagtgggggttaggtttt--gattatgattttttgaattaaaaagtgtagaatccatggcaat 182192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 174082 - 174120
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtga 123  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  174082 attgtagagctttgttcatctaaattaaggtaagggtga 174120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 130 - 463
Target Start/End: Complemental strand, 9119 - 8793
Alignment:
Q  130 ctctcaatgataatggttatataattctgattttggtttagaatag--ttctagttgaaattgggaattgggggttaggttttgggagtatgattcttgg 227  Q
    ||||||||||| || ||| |||||||||||||||| ||||| |  |  |||| ||| || ||||||||||||  ||||||||||  | ||| | | |||     
T  9119 ctctcaatgattatagttgtataattctgattttgatttagcaaggggttctggttaaatttgggaattggga-ttaggttttg--attattaattttga 9023  T
Q  228 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 327  Q
     | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||       ||    
T  9022 ttagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg-------ta 8930  T
Q  328 gatgaaatttggtttttctggg-tgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaacta 426  Q
    ||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |    
T  8929 gatgaaatttggttttttttggatgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaaccctctgtaacaa 8830  T
Q  427 tttcgctattagctcagttttcaccattagcgaaatt 463  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  8829 tttcgctattagctaagttttcgccattagcgaaatt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 2e-78; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 218 - 472
Target Start/End: Original strand, 25483552 - 25483799
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25483552 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttgg 25483651  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
    |        |||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25483652 ga-------agatgaaatttgttttttttgggtgaaaaatgtgcagaaatggtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 25483744  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    || ||||||||| |||||||||||| ||||| | || |||||||||||| |||||    
T  25483745 ctttaactattttgctattagctcacttttcgctatcagcgaaattgcctagtga 25483799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 28854960 - 28854816
Alignment:
Q  17 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagaattgtagagctttgttcatctgaattaaggta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28854960 acatcagttttgggagaaaacaagagaaagcaagagaaccaagggagagccaggtgaagagaatcagatttgtagagctttgttcatctgaattaaggta 28854861  T
Q  117 agggtgagactatctctcaatgataatggttatataattctgatt 161  Q
    |||||||| ||| ||  |||||||  | |||||||||||||||||    
T  28854860 agggtgaggctaacttgcaatgattttagttatataattctgatt 28854816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 271 - 472
Target Start/End: Original strand, 36732649 - 36732849
Alignment:
Q  271 gttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgt 370  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||| ||||||||||||||    
T  36732649 gttcagattgtagaataatcataggtcaagtttcctatcaaatttgggatttgggtagacgaaatttgggttttttgggtgaaaaatgtgcagaaatcgt 36732748  T
Q  371 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagt 470  Q
    |||||| | ||||||||||||||| ||||||||||| ||||    | ||||||| ||||||||||||||| | ||||| |||||||||||||||| ||||    
T  36732749 aacagc-atggaaaaactcgctagaagttcgctattggcgatttcctctgtaacaatttcgctattagctaaattttcgccattagcgaaattgcacagt 36732847  T
Q  471 ga 472  Q
    ||    
T  36732848 ga 36732849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 8413859 - 8413975
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8413859 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 8413958  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  8413959 ggtttgggtggatgaaa 8413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 19882889 - 19882773
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19882889 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 19882790  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  19882789 ggtttgggtggatgaaa 19882773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 260 - 472
Target Start/End: Complemental strand, 22483678 - 22483473
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattg 358  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||  ||||||||       |||||||||||||| ||||| ||||||| || ||    
T  22483678 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg-------tagatgaaatttgggtttttttgggtgataaatg 22483586  T
Q  359 tgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcg 458  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| || |||  |  |||||| |||||||||||||||   ||||| ||||||| |    
T  22483585 tgcagaaatcgtaacagcaaggg-aaaactcgctagaagttcgctattggcaaaatcctatgtaacaatttcgctattagctagattttcgccattagtg 22483487  T
Q  459 aaattgcccagtga 472  Q
    ||||||| ||||||    
T  22483486 aaattgcacagtga 22483473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 22617702 - 22617542
Alignment:
Q  92 agctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattg 190  Q
    |||||||||||||  ||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||  ||||||||||||||||    
T  22617702 agctttgttcatca-aatcaaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaagggttctagttgaaattg 22617604  T
Q  191 ggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaat 254  Q
    ||||||||||||||||||||  || | ||||| ||| ||| || ||||||||||||||| ||||    
T  22617603 ggaattgggggttaggtttt--gattttgatttttgaattaaagagtgtagaaaccatggcaat 22617542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 23661225 - 23661140
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23661225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23661140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 20455915 - 20455831
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 315  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20455915 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 17460331 - 17460416
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17460331 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttg 17460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 20463123 - 20463042
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaa 312  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  20463123 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaa 20463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 20460888 - 20460809
Alignment:
Q  236 gtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 315  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20460888 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 11775655 - 11775548
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  11775655 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca---------ataatcataggttaagtttcctatcaaatttgg 11775565  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  11775564 ggtttgggtggatgaaa 11775548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 336
Target Start/End: Original strand, 14397031 - 14397138
Alignment:
Q  228 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 327  Q
    |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || |||||||     
T  14397031 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattt-ggatttgggtt 14397129  T
Q  328 gatgaaatt 336  Q
    |||||||||    
T  14397130 gatgaaatt 14397138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 20455174 - 20455095
Alignment:
Q  236 gtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 315  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  20455174 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtgtcctaacaaattt 20455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 25657668 - 25657744
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  25657668 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 25657744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 261
Target Start/End: Complemental strand, 20387584 - 20387386
Alignment:
Q  62 agagccaggtgaagagaatcagaat-tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataatggttatataattctga 159  Q
    ||||||| |||  |||||||||| | ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||  | |||||| |||||||||||    
T  20387584 agagccaagtggggagaatcagattctgtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatagttatggttgtataattctga 20387487  T
Q  160 ttttggtttag--aatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgt 257  Q
    ||||| |||||  |   ||||| ||| || ||||||||| ||| ||||||||||  |   ||||| ||| ||||||||||||||||||||||||||| ||    
T  20387486 ttttgatttagcaaggggttctggttaaatttgggaatt-gggattaggttttgtta--ttgatttttgaattgaaaagtgtagaaaccatgacaatagt 20387390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 16198734 - 16198658
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  16198734 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 16198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 23478980 - 23478904
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||    
T  23478980 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttgatgaaatt 23478904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 19880721 - 19880663
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  19880721 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 19880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 23482038 - 23482080
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  23482038 tttgttcatctaaattaaggtaagggtgagactatctctcaat 23482080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 39364982 - 39364942
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgataat 143  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  39364982 tctgaattaaggtaagggtgagactatctctcaataataat 39364942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 364920 - 364854
Alignment:
Q  105 tgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||| ||||||||||||||||| ||||||||||| || | || |||||||||||||||| |||||    
T  364920 tgaattcaggtaagggtgagactaactctcaatgattatagtttgtataattctgattttgatttag 364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 20879371 - 20879313
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| |||||||||  |||||| | ||||||| |||||||||||    
T  20879371 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttggg 20879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 26454604 - 26454546
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||| | |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  26454604 taagaattaaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 26454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 38184685 - 38184723
Alignment:
Q  99 ttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  38184685 ttcatctgaattaaggtaagggtgagactaactctcaat 38184723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 21931763 - 21931722
Alignment:
Q  99 ttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  21931763 ttcatctgaattaaggtaagggtgaggctaactctcaatgat 21931722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 43113078 - 43113017
Alignment:
Q  109 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag 170  Q
    |||||||||||||||| ||| ||||||||||| || ||| ||||||||||||| || |||||    
T  43113078 ttaaggtaagggtgaggctaactctcaatgattatagttttataattctgattatgttttag 43113017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 12037316 - 12037384
Alignment:
Q  258 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 326  Q
    ||||| ||||| |||| |||| |||||||||||||||||  ||  |||||||||||||||| |||||||    
T  12037316 gttaataattggtgtttaggttgtagaataatcataggtagagactcctatcaaatttgggatttgggt 12037384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 20458066 - 20458026
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagacta 128  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  20458066 gtagagcttcgttcatctaaattaaggtaagggtgagacta 20458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 22919946 - 22919998
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| ||||||||||||| |||| ||||||||||| ||| ||||||||    
T  22919946 attgtagagttttgttcatctgatttaaagtaagggtgaggctaactctcaat 22919998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 20494327 - 20494411
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||| |||||||||  |||| |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  20494327 ttgtagagcgttgttcatc--aattcaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 20494411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 22433580 - 22433676
Alignment:
Q  75 gagaatcagaat-tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggtttag 170  Q
    |||||||||| | ||||||| ||||||||||  ||| ||||||||||||||| ||| ||||||||||| || || | |||||||||||||||| |||||    
T  22433580 gagaatcagattctgtagagttttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattatagtctgtataattctgattttgttttag 22433676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 137
Target Start/End: Complemental strand, 18614330 - 18614300
Alignment:
Q  107 aattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||    
T  18614330 aattaaggtaagggtgagactatctctcaat 18614300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 20517218 - 20517268
Alignment:
Q  268 gatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  20517218 gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 20517268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 21299350 - 21299412
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 211  Q
    |||||||||||||||||||||   ||||||| || ||||||||||||| |||  |||||||||    
T  21299350 tataattctgattttggtttaacctagttctggtagaaattgggaatttgggtctaggttttg 21299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 14056564 - 14056597
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataat 143  Q
    |||||||||||||||||||||||||||| |||||    
T  14056564 taaggtaagggtgagactatctctcaataataat 14056597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 21685205 - 21685234
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  21685205 tttgttcatctgaattaaggtaagggtgag 21685234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 21689554 - 21689583
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  21689554 tttgttcatctgaattaaggtaagggtgag 21689583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 25112031 - 25111998
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataat 143  Q
    |||||||||||||||||||||||||||| |||||    
T  25112031 taaggtaagggtgagactatctctcaataataat 25111998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 32950973 - 32950924
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||| || ||||||||||||||||||| ||| ||||||||    
T  32950973 gtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaat 32950924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 42559434 - 42559516
Alignment:
Q  88 gtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| || | || ||||||| |||||||| |||||    
T  42559434 gtagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattatgattttgatttag 42559516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 15635072 - 15635125
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||  |||| ||||||||||||| |||| |||||||||||    
T  15635072 ttgtagagctttgttcatc--aattcaaggtaagggtgatactaactctcaatgat 15635125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 19750619 - 19750591
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  19750619 ttgttcatctgaattaaggtaagggtgag 19750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 21860535 - 21860595
Alignment:
Q  111 aaggtaagggtgagactatctctcaatgataat-ggttatataa-ttctgattttggttta 169  Q
    |||||||||||||||||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  21860535 aaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 21860595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 24980238 - 24980136
Alignment:
Q  40 gagaaagcaagagaa--ccaag-ggagagccaggtgaagagaatcagaatt---gtagagctttgttcatctgaatt-aaggtaagggtgagactatctc 132  Q
    |||||||||||||||  ||||| ||||||||| |||||||||| |||| ||   |||||||||||||| ||  |||| |||||||||||||| ||| |||    
T  24980238 gagaaagcaagagaaaaccaagaggagagccaagtgaagagaaccagattttctgtagagctttgttcttc--aattcaaggtaagggtgaggctaactc 24980141  T
Q  133 tcaat 137  Q
    |||||    
T  24980140 tcaat 24980136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 218 - 472
Target Start/End: Complemental strand, 2066 - 1812
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||| |||  |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  2066 tgatttttgaattgaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgg 1967  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 417  Q
    | |||||||| ||||||||||| |||| ||| |||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| | |     
T  1966 gatttgggtatatgaaatttgggttttttggatgaaaaatgtgcagaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatccct 1867  T
Q  418 ctgtaactatttcgctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    ||||||| ||||||||||| ||| | ||||| | |||||||||||||| ||||||    
T  1866 ctgtaacaatttcgctattcgctaacttttcgctattagcgaaattgctcagtga 1812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 2191 - 2109
Alignment:
Q  87 tgtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatg-ataatggttatataattctgattttggttta 169  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||| |||  | || |||||||||||||||| ||||    
T  2191 tgtagagctttgttcatc--aatctaaggtaagggtgaggctagctctcaatgaatatagtttgtataattctgattttgattta 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 231 - 472
Target Start/End: Complemental strand, 8092 - 7860
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 330  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||    
T  8092 gaaaagtgtagaaatcatggcaattgttttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg-------tagat 8000  T
Q  331 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 430  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | || |||| ||||     
T  7999 gaaatttggtttttttgggtgaaaat-gtgcagaaatcgtaacagcaagggaaaaactcgctaggagatcgctattggcgaaacactct-taacaatttt 7902  T
Q  431 gctattagctcagttttcaccattagcgaaattgcccagtga 472  Q
    |||||| ||| | ||||| |||||||| ||||||| ||||||    
T  7901 gctattcgctaacttttcgccattagcaaaattgctcagtga 7860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 8237 - 8155
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggttta 169  Q
    ||||| ||| |||| || ||||||| ||||||||||||||| ||||||||||| || | || |||||||||||| ||| ||||    
T  8237 gtagaacttcgttcgtcagaattaaagtaagggtgagactaactctcaatgattatagtttgtataattctgatcttgattta 8155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 125; Significance: 3e-64; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 260 - 464
Target Start/End: Complemental strand, 22020 - 21816
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgt 359  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||    
T  22020 taagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgt 21921  T
Q  360 gcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcga 459  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||| ||||||| |  |||||| ||||||||||||||| |  |||| | ||||||||    
T  21920 gcagaaatcgtaacagtgggggaaaaactcgctagaagttcgctattggcgaaaccctttgtaacaatttcgctattagctaaagtttcgctattagcga 21821  T
Q  460 aattg 464  Q
    |||||    
T  21820 aattg 21816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 10174 - 10134
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagacta 128  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  10174 gtagagcttcgttcatctaaattaaggtaagggtgagacta 10134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 22253 - 22210
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagacta 128  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||    
T  22253 attgtaaagcttcgttcatctaaattaaggtaagggtgagacta 22210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 36562 - 36502
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttt 209  Q
    |||||||||||||||||||||  ||  |||| || ||||||||||||| ||| ||||||||    
T  36562 tataattctgattttggtttaacatgtttctggtagaaattgggaatttgggtttaggttt 36502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 111; Significance: 8e-56; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 111 - 248
Target Start/End: Complemental strand, 385208 - 385070
Alignment:
Q  111 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  385208 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattggggattaggtttt 385109  T
Q  211 gggagtatgattcttggattgaaaa-gtgtagaaaccat 248  Q
     ||||||||||| |||||||||||| ||||||| |||||    
T  385108 tggagtatgatttttggattgaaaaggtgtagagaccat 385070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 66237 - 66308
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| |||| || |||||||||    
T  66237 aattggtgttcaggttgtagaataatcataggtagagttt-ctatcaaatttgggatttgagttgatgaaatt 66308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 137
Target Start/End: Complemental strand, 116954 - 116924
Alignment:
Q  107 aattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||    
T  116954 aattaaggtaagggtgagactatctctcaat 116924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 204328 - 204377
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||| ||||    
T  204328 gtagagcttcgttcgtctgaattaaggtaagggtgaggctaactcccaat 204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 39923 - 40075
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39923 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgg 40022  T
Q  318 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgt 370  Q
    | |||||||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  40023 gatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcagaagtcgt 40075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 260 - 472
Target Start/End: Original strand, 8951 - 9156
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgt 359  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||||||||  ||||||       |||||||||||||||| |||| |||||||||| | |    
T  8951 taagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttg-------ggtagatgaaatttgggttttttgggtgaaaaatat 9043  T
Q  360 gcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcga 459  Q
    ||| |||||||||| ||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||||||| | ||||||||||||||||    
T  9044 gcataaatcgtaactgcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattagctaacttttcaccattagcga 9143  T
Q  460 aattgcccagtga 472  Q
    |||||| ||||||    
T  9144 aattgcacagtga 9156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 264 - 423
Target Start/End: Complemental strand, 21434 - 21275
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 363  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||    
T  21434 aattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatgaaatttggtttttttgggtgaaaaatgtgcag 21335  T
Q  364 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaa 423  Q
    |||||||||||  | |||||||||||||||| ||||||||||| || |||| | ||||||    
T  21334 aaatcgtaacaataggggaaaaactcgctagaagttcgctattggcaaaaccctctgtaa 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 106325 - 106528
Alignment:
Q  270 tgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgcagaaatc 368  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||  || |||||||||||||||| ||||| | |||||||| ||| ||||||||    
T  106325 tgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttgggagttcggtagatgaaatttgggtttttttaggtgaaaaatgttcagaaatc 106424  T
Q  369 gtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcaccattagcgaaattgccca 468  Q
    ||||||| | |||||||||||||||  ||||||||||| ||||| | | ||||||| ||||||||||| ||| | ||||| | |||||||||||||| ||    
T  106425 gtaacagtaggggaaaaactcgctattagttcgctattggcgaatccctctgtaacaatttcgctattggctaacttttcgctattagcgaaattgcaca 106524  T
Q  469 gtga 472  Q
    ||||    
T  106525 gtga 106528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 169381 - 169265
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  169381 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 169282  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  169281 ggtttgggtggatgaaa 169265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 176734 - 176618
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  176734 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 176635  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  176634 ggtttgggtggatgaaa 176618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 2219 - 2305
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  2219 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttgg 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 2069 - 2121
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| || |||||    
T  2069 attgtagagttttgttcatctaaattaaggtaagggtgagactaactttcaat 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 339
Target Start/End: Complemental strand, 1238 - 960
Alignment:
Q  62 agagccaggtgaagagaatcagaatt-gtagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataatggtta-tataattctg 158  Q
    ||||||| |||  |||||||||| || ||||||||||||| |||  ||| ||||||||||||||| ||| ||||||||||| || |||  ||| ||||||    
T  1238 agagccaagtggggagaatcagattttgtagagctttgtttatc--aatctaaggtaagggtgaggctaactctcaatgattatagtttgtatgattctg 1141  T
Q  159 attttggtttagaatag--ttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattg 256  Q
    |||||| ||||| |  |  || | ||| || ||||||||||||  ||||||||||    | ||||| ||| |||||||||||||||||||||   |||||    
T  1140 attttgatttagcaaggggttgtggttaaatttgggaattggga-ttaggttttgatttt-tgatttttgaattgaaaagtgtagaaaccatagaaattg 1043  T
Q  257 tgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 339  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||    
T  1042 tgttaagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggatttgggttggtgaaaattgg 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 7121 - 7237
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||||  ||||||||| |||||||| |||||||||||||||||||    
T  7121 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 7220  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  7221 ggtttgggtggatgaaa 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 3905 - 3789
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||||| || |||||| |||||||| |||||||||||||||||||    
T  3905 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttgg 3806  T
Q  318 ggtttgggtagatgaaa 334  Q
    ||||||||| |||||||    
T  3805 ggtttgggtggatgaaa 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 31429 - 31580
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaat 188  Q
    |||| ||||||||||  ||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||  ||||||||||||||    
T  31429 agagttttgttcatca-aatcaaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaagggttctagttgaaat 31527  T
Q  189 tgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaa 243  Q
    ||||||||||||||||||||||  || ||||||| ||| ||| || |||||||||    
T  31528 tgggaattgggggttaggtttt--gattatgatttttgaattaaagagtgtagaa 31580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 72365 - 72278
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  72365 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 72278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 70007 - 70083
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  |||||| ||  ||||||| |||||||||||||||||||| ||||||| |||||||||    
T  70007 taagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 70083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 1195 - 1223
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  1195 ttgttcatctgaattaaggtaagggtgag 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 71; Significance: 6e-32; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 21911 - 21817
Alignment:
Q  232 aaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 326  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  21911 aaaagtgtagaaaccatggcaattgtgttaacaattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggt 21817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 22059 - 22010
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||||||| |||||||||||||||||| ||| || |||||    
T  22059 gtagagcttcgttcatctaaattaaggtaagggtgaggctaactttcaat 22010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 125
Target Start/End: Complemental strand, 29551 - 29522
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgaga 125  Q
    ||||||||||||||||||||||||||||||    
T  29551 ttgttcatctgaattaaggtaagggtgaga 29522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 37145 - 37117
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  37145 ttgttcatctgaattaaggtaagggtgag 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 1540 - 1419
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaa 186  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||  ||||||||||| |||    
T  1540 gtagagctttgttcttc--aattaaggtaagggtgagactatctctcaatgataatggttatgttattctgattttgggtttaacatagttctagtagaa 1443  T
Q  187 attgggaattgggggttaggtttt 210  Q
    |||||||||| ||| |||| ||||    
T  1442 attgggaatttgggtttagatttt 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 18535 - 18419
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  18535 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 18436  T
Q  318 ggtttgggtagatgaaa 334  Q
    | ||||||| |||||||    
T  18435 gatttgggttgatgaaa 18419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 1004 - 917
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  1004 gaaaagtgtagaaatcatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 2151 - 2236
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  2151 gaaaagtgtagaaaccatggtaattgtgttaagaactgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 1001 - 916
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1001 gaaaagtgtagaaaccatggtaattgtgttaagagttgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 1174 - 1259
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1174 gaaaagtgtagaaaccatggtaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 28446 - 28373
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 337  Q
    |||||||| |||||| ||||||||| ||||||   ||||| |||| ||||| ||| ||||||||||||| ||||    
T  28446 aattgatggtcaggttgtagaataaacataggaagagttttctataaaattagggatttgggtagatgagattt 28373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 12978 - 12891
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||    
T  12978 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttttctaacaaatttggg 12891  T

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Target: scaffold0086 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 272 - 465
Target Start/End: Original strand, 35652 - 35836
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 370  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||         |||||| |||| |||| |||||||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagataaaatt---------tgggtgaaaaaatgtgtagaaatcgt 35742  T
Q  371 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcaccattagcgaaattgc 465  Q
    |||||| |||  |||||||||||| ||||| ||||| ||||||  | ||||||| ||||||||||||| |||| ||||| ||||||||||||||||    
T  35743 aacagc-aggagaaaactcgctagaagttctctattggcgaaatcctctgtaacaatttcgctattag-tcagattttcgccattagcgaaattgc 35836  T

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Target: scaffold0051 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 32084 - 31967
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||| |||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  32084 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgg 31986  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | ||||||| |||||||||    
T  31985 gatttgggttgatgaaatt 31967  T

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Target: scaffold0014 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 261
Target Start/End: Complemental strand, 189803 - 189630
Alignment:
Q  86 ttgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttt-agaatagttctagttg 184  Q
    ||||| |||||||||||||  ||| |||||||||||||||| | |||||||||||||| ||| |||| ||||||||||| ||| | ||  ||||||||||    
T  189803 ttgtatagctttgttcatca-aatcaaggtaagggtgagaccaactctcaatgataatagttctatacttctgattttgatttaacaagggttctagttg 189705  T
Q  185 aaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 261  Q
    || |||| || |||||||||||||||  || ||||||| ||| |||||| |||||| |||||||| |||| ||||||    
T  189704 aatttggaaaatgggggttaggtttt--gattatgatttttgaattgaagagtgtacaaaccatggcaatggtgtta 189630  T

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Target: scaffold0293 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 19410 - 19528
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||| ||| |||||||||||||||||||    
T  19410 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgg 19509  T
Q  318 ggtttgggtagatgaaatt 336  Q
    | | || || |||||||||    
T  19510 gatatgagttgatgaaatt 19528  T

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Target: scaffold0112 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 23247 - 23332
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 316  Q
    ||||| |||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||    
T  23247 gaaaaatgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacgaatttg 23332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 82920 - 82839
Alignment:
Q  237 tgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||||| ||| ||||||||||    
T  82920 tgtagaaaccatgataattgtgttaagaattgatgttcaagttgtagaataatcatacgttaagttttctaacaaatttggg 82839  T

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Target: scaffold0676 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 2708 - 2612
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtg 360  Q
    ||||| ||||||| | || ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| ||||    
T  2708 aattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttgggatttgagtagatgaaatttgggttttttgggtgaaaaatgtg 2612  T

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Target: scaffold0083 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 42225 - 42153
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttt 303  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  42225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttt 42153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 1835 - 1759
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||    
T  1835 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttgatgaaatt 1759  T

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Target: scaffold0061 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 14740 - 14814
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  14740 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 14814  T

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Target: scaffold0061; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 23798 - 23872
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  23798 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 21931 - 22007
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  21931 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 22007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 71605 - 71510
Alignment:
Q  99 ttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaatt 196  Q
    ||||||||||||||||||||||||||| |  || |||||  ||  | || ||  |||||||||||||||||  |||||||| ||| ||||||||||||    
T  71605 ttcatctgaattaaggtaagggtgagatttactttcaatagtatagattgta--attctgattttggtttaacatagttctggttaaaattgggaatt 71510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 42613 - 42514
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 317  Q
    ||||| ||| |||||||||||||||||||||   ||| |||||||||||||| |||||||  ||||||||| | |||||| |||||||||||||||||||    
T  42613 tgatttttgaattgaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttgg 42514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 26108 - 26057
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaa 136  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||||    
T  26108 attgtagagctttgttcatctaaattaaggtaagggtaaggctaactctcaa 26057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 163262 - 163175
Alignment:
Q  231 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||  |||||| | ||| | |||||||||||||    
T  163262 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataacaataggtgatgttccttatcaaatttggg 163175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 20995 - 20919
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  20995 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 20919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 12363 - 12322
Alignment:
Q  99 ttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  12363 ttcatctaaattaaggtaagggtgaggctaactctcaatgat 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 29370 - 29446
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  29370 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 29446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 33907 - 33991
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| ||||||||| | || | |||||||||||||||| || |||||    
T  33907 ttgtagagctttgttcatc--aattcaaggtaagggtgaggctaactctcaatggttatagtttatataattctgattctgttttag 33991  T

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Target: scaffold0790 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 5508 - 5421
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttgg-tttagaatagttctagttgaaattgggaatt 196  Q
    |||||||||||||||||||||| |||||  |||||| ||||| ||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  5508 taaggtaagggtgagactatctttcaatagtaatgggtatatgattctgattttggatttagcatagttctggttaaaattgggaatt 5421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 1156 - 1089
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 339  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  1156 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgg 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 6662 - 6595
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 339  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  6662 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgg 6595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 11121 - 11045
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| ||||  || |||||||||||||||||||| ||| ||| |||||||||    
T  11121 taagaattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttgatgaaatt 11045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 12139 - 12081
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  12139 taagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggg 12081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 13820 - 13772
Alignment:
Q  286 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13820 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 13772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 19001 - 18934
Alignment:
Q  272 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 339  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  | || |||||||||||||||||    
T  19001 ttcaggttgtagaataatcatatgttaagtttcctatcaaatttttgattagggtagatgaaatttgg 18934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 9726 - 9569
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaat 188  Q
    |||| ||||||||||  ||||||||||||||||||| |||||||||||  | |||| ||| ||||||||||||| ||||||  |||||||| || ||| |    
T  9726 agagttttgttcatca-aattaaggtaagggtgagattatctctcaatagtgatggctatgtaattctgattttgggtttaacatagttctggtagaatt 9628  T
Q  189 tgggaattgggggttaggttttgggagtatgattcttggattgaaa-agtgtagaaacc 246  Q
    |||||||| ||| |||| ||||     | ||||| ||||||||||| ||||||||||||    
T  9627 tgggaatttgggtttagattttaattctttgatttttggattgaaagagtgtagaaacc 9569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 8858 - 8782
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | |||| || |||||||||    
T  8858 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaatt 8782  T

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Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 28608 - 28536
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 336  Q
    ||||||||||||||| |||||||||| ||| || | ||||||| ||||||||||| ||||||||| |||||||    
T  28608 aattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatttgggtagttgaaatt 28536  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 18824 - 18882
Alignment:
Q  288 atcataggttaagtttcctatcaaatttggggtttgggtagatgaaa--tttggttttt 344  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  18824 atcataggttaagtttcctatcaaatttgtggtttgggtggatgaaaattttggttttt 18882  T

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Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 35390 - 35319
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatg 331  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||  |||||||| ||| ||| ||||    
T  35390 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggatttaggttgatg 35319  T

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Target: scaffold0278 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 23829 - 23887
Alignment:
Q  218 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcag 276  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||||||||||    
T  23829 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcag 23887  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 121973 - 121928
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||    
T  121973 tttgttcatctgaattaaggtaagggtgaggctaactctcaatgat 121928  T

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Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 132849 - 132804
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||    
T  132849 tttgttcatctgaattaaggtaagggtgaggctaactctcaatgat 132804  T

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Target: scaffold0696 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 3401 - 3342
Alignment:
Q  90 agagctttgttcatctgaattaaggtaagggtgagactatctctcaatgataatggttata 150  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||| |||||||||||    
T  3401 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaatggtaatggttata 3342  T

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Target: scaffold0077 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 22090 - 22166
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||| || | || ||||||| |||||||| |||||    
T  22090 tttgttcatctgaattaaggtaaggatgaggctaactctcaatgattatagtttgtataattatgattttgatttag 22166  T

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Target: scaffold0635 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 8032 - 7948
Alignment:
Q  86 ttgtagagctttgttcatctgaatt-aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  8032 ttgtagagctttgttcatc--aattcaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 7948  T

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Target: scaffold0461 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 1 - 35
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  1 tctgaattaaggtaagggtgagactatctctcaat 35  T

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Target: scaffold0222 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 16882 - 16848
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  16882 tctgaattaaggtaagggtgagactatctctcaat 16848  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 5774 - 5836
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 326  Q
    ||||||||||||||| ||||||||| |||||||| ||||||| ||  |||||||| |||||||    
T  5774 aattgatgttcaggttgtagaataaacataggttgagtttcccattgaatttgggatttgggt 5836  T

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Target: scaffold0169 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 7054 - 7001
Alignment:
Q  86 ttgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||    
T  7054 ttgtagag-tttgttcatctgaattaagataagggtgaggctaactctcaatgat 7001  T

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Target: scaffold0146 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 13694 - 13660
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  13694 tctgaattaaggtaagggtgagactatctctcaat 13660  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 101921 - 101955
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||||||||||||    
T  101921 tctgaattaaggtaagggtgagactatctctcaat 101955  T

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Target: scaffold0429 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 1978 - 2027
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  1978 gtagagcttcgttcatctaaattaaggtaagggtgaggctaactctcaat 2027  T

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Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 3961 - 3912
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| ||||||||    
T  3961 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 3912  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 1143 - 1062
Alignment:
Q  89 tagagctttgttcatctgaat-taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 170  Q
    ||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  1143 tagagctttgttcatc--aatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 1062  T

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Target: scaffold0273 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 7752 - 7700
Alignment:
Q  85 attgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||| |||| || ||||||||||||||||||| ||| ||||||||    
T  7752 attgtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaat 7700  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 2134 - 2075
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttg 323  Q
    ||||| ||||||||| |||||||||||||||||  | ||| |||||||||||||| ||||    
T  2134 aattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttgggatttg 2075  T

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Target: scaffold0371 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 8575 - 8516
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttta 169  Q
    ||||||||||||||| ||| ||||||||||| || | | |||||||||||||||| ||||    
T  8575 taaggtaagggtgaggctaactctcaatgattatagatgtataattctgattttgattta 8516  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 38600 - 38690
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 355  Q
    ||||||||||||||| || ||||||  |||||| | ||||| | ||||||||| | ||||||||| ||||||| || |||| ||||||||||    
T  38600 aattgatgttcaggttgtggaataacaataggtaatgtttcttgtcaaatttgagatttgggtagttgaaattggggtttt-tgggtgaaaa 38690  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 6948 - 7006
Alignment:
Q  260 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||||||||||| |||||||||  ||| || | ||||| |||||||||||||    
T  6948 taagaattgatgttcaggttgtagaataacaatatgtgatgtttcttatcaaatttggg 7006  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 11688 - 11654
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaat 137  Q
    |||||||||||||||||||||||||| ||||||||    
T  11688 tctgaattaaggtaagggtgagactaactctcaat 11654  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 8735 - 8673
Alignment:
Q  264 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 326  Q
    ||||| ||||||||| | ||| |||||||||||  ||||| |||||||||||||| |||||||    
T  8735 aattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttgggatttgggt 8673  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 35416 - 35469
Alignment:
Q  86 ttgtagagctttgttcatctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    ||||||||||||||||||| ||  |||||||||||| |||||| |||||||||||    
T  35416 ttgtagagctttgttcatc-gatctaaggtaagggtaagactaactctcaatgat 35469  T

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Target: scaffold0104 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 40759 - 40811
Alignment:
Q  73 aagagaatcagaatt--gtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||  |||||| ||||||||||||| ||||||||||||||||    
T  40759 aagagaatcagaattctgtagag-tttgttcatctgatttaaggtaagggtgag 40811  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 19022 - 19072
Alignment:
Q  268 gatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 318  Q
    ||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  19022 gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 19072  T

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Target: scaffold1290 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 393 - 422
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  393 tttgttcatctgaattaaggtaagggtgag 422  T

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Target: scaffold0815 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 1507 - 1474
Alignment:
Q  107 aattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||||| |||||||||||    
T  1507 aattaaggtaagggtgagactaactctcaatgat 1474  T

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Target: scaffold0402 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Complemental strand, 15978 - 15949
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  15978 tttgttcatctgaattaaggtaagggtgag 15949  T

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Target: scaffold0326 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 4515 - 4544
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  4515 tttgttcatctgaattaaggtaagggtgag 4544  T

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Target: scaffold0326; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 19697 - 19726
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  19697 tttgttcatctgaattaaggtaagggtgag 19726  T

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Target: scaffold0317 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 1448 - 1411
Alignment:
Q  103 tctgaattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  1448 tctgaaataaggtaagggtgagactatctttcaatgat 1411  T

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Target: scaffold0256 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 2005 - 2042
Alignment:
Q  270 tgttcaggtggtagaataatcataggttaagtttccta 307  Q
    |||||| || ||||||||||||||||||||||||||||    
T  2005 tgttcatgttgtagaataatcataggttaagtttccta 2042  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Original strand, 14994 - 15027
Alignment:
Q  107 aattaaggtaagggtgagactatctctcaatgat 140  Q
    |||||||||||||||||||||| |||||||||||    
T  14994 aattaaggtaagggtgagactaactctcaatgat 15027  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 21898 - 21927
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  21898 tttgttcatctgaattaaggtaagggtgag 21927  T

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Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 26095 - 26124
Alignment:
Q  95 tttgttcatctgaattaaggtaagggtgag 124  Q
    ||||||||||||||||||||||||||||||    
T  26095 tttgttcatctgaattaaggtaagggtgag 26124  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 52052 - 51991
Alignment:
Q  110 taaggtaagggtgagactatctctcaatgataat-ggttatataa-ttctgattttggttta 169  Q
    ||||||||||||||||||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  52052 taaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 51991  T

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Target: scaffold0244 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 844 - 816
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  844 ttgttcatctgaattaaggtaagggtgag 816  T

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Target: scaffold0244; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 14653 - 14625
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  14653 ttgttcatctgaattaaggtaagggtgag 14625  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 25960 - 25996
Alignment:
Q  88 gtagagctttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||| || |||||||||||||||||||    
T  25960 gtagagctttgttcgtcagaattaaggtaagggtgag 25996  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 46554 - 46526
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  46554 ttgttcatctgaattaaggtaagggtgag 46526  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 59579 - 59607
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  59579 ttgttcatctgaattaaggtaagggtgag 59607  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 72033 - 72061
Alignment:
Q  96 ttgttcatctgaattaaggtaagggtgag 124  Q
    |||||||||||||||||||||||||||||    
T  72033 ttgttcatctgaattaaggtaagggtgag 72061  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 42111 - 42167
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 205  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||| ||| ||||    
T  42111 tataattctgagtttggtttaacatagttctggttaaaattgggaatttgggtttag 42167  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 52806 - 52862
Alignment:
Q  149 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 205  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||| ||| ||||    
T  52806 tataattctgagtttggtttaacatagttctggttaaaattgggaatttgggtttag 52862  T

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