View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1259_high_25 (Length: 243)
Name: NF1259_high_25
Description: NF1259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1259_high_25 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 51908854 - 51908633
Alignment:
| Q |
22 |
aactaagacatgttccaaactatacaactttagactaaggcaatggtcatttcaacagactaatcaagtttgaaaaccactataatgtcactactactct |
121 |
Q |
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| T |
51908854 |
aactaagacatgttccaaactatacaactttagactaaggcaatggtcatttcagcagactaatcaagtttgaaaaccactataatgtcactgctactct |
51908755 |
T |
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| Q |
122 |
tcatcagttaactcctccacctctcctgcagcagcagtttccttgtcatcagactggccttccttatcttccttatctgaaccctcttgatcctatacat |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51908754 |
tcatcagttaactcctccacctctcctgcagcagcagtttccttgtcatcagactggccttccttatcttccttatctgaaccctcttgatcctatacat |
51908655 |
T |
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| Q |
222 |
acagcaccagcttaagtaaaga |
243 |
Q |
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|||||||||||||||||||||| |
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| T |
51908654 |
acagcaccagcttaagtaaaga |
51908633 |
T |
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