View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1260-Insertion-1 (Length: 164)
Name: NF1260-Insertion-1
Description: NF1260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1260-Insertion-1 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 153; Significance: 2e-81; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 153; E-Value: 2e-81
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 52874615 - 52874771
Alignment:
| Q |
8 |
atggagtgacttttaaatcgtttggtatatcatgatgtaaagttacactttcatttaactagtgttttaacgatgcttaaattggaaatttataatcaat |
107 |
Q |
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| T |
52874615 |
atggagtgacttttaaatcatttggtatatcatgatgtaaagttacactttcatttaactagtgttttaacgatgcttaaattggaaatttataatcaat |
52874714 |
T |
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| Q |
108 |
gaattacctcatcatgaatgctactatgcctttcctttcatctttgactaccttcta |
164 |
Q |
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| T |
52874715 |
gaattacctcatcatgaatgctactatgcctttcctttcatctttgactaccttcta |
52874771 |
T |
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