View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12600_high_26 (Length: 212)

Name: NF12600_high_26
Description: NF12600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12600_high_26
NF12600_high_26
[»] scaffold0064 (1 HSPs)
scaffold0064 (12-200)||(43822-44010)
[»] chr3 (46 HSPs)
chr3 (9-195)||(19249361-19249547)
chr3 (1-200)||(20725106-20725305)
chr3 (9-196)||(12388821-12389008)
chr3 (1-196)||(16032548-16032742)
chr3 (1-200)||(29951378-29951578)
chr3 (1-200)||(30000532-30000732)
chr3 (1-200)||(49642702-49642902)
chr3 (1-196)||(6090755-6090951)
chr3 (1-200)||(14392944-14393144)
chr3 (12-199)||(26417631-26417818)
chr3 (40-200)||(41495018-41495179)
chr3 (1-200)||(13948355-13948555)
chr3 (1-200)||(37467352-37467552)
chr3 (1-200)||(17238862-17239062)
chr3 (40-200)||(23538146-23538306)
chr3 (19-200)||(12968325-12968506)
chr3 (36-196)||(38177618-38177779)
chr3 (1-201)||(52920424-52920624)
chr3 (1-196)||(2561211-2561407)
chr3 (1-196)||(47207729-47207924)
chr3 (1-200)||(12963025-12963225)
chr3 (1-200)||(14969346-14969546)
chr3 (1-196)||(28582129-28582325)
chr3 (79-200)||(13780603-13780724)
chr3 (1-200)||(31303405-31303605)
chr3 (93-200)||(22804056-22804163)
chr3 (36-196)||(13824092-13824253)
chr3 (1-200)||(15903217-15903418)
chr3 (79-196)||(20646177-20646294)
chr3 (1-196)||(18121562-18121758)
chr3 (1-196)||(49553429-49553625)
chr3 (1-196)||(16658558-16658754)
chr3 (98-200)||(11223582-11223684)
chr3 (1-196)||(47405363-47405557)
chr3 (1-196)||(12726170-12726366)
chr3 (80-196)||(53056747-53056863)
chr3 (98-196)||(33583252-33583351)
chr3 (38-196)||(40799897-40800056)
chr3 (1-196)||(2785087-2785282)
chr3 (1-196)||(20627373-20627567)
chr3 (5-196)||(18142696-18142888)
chr3 (126-196)||(14955450-14955520)
chr3 (98-196)||(29855432-29855530)
chr3 (43-148)||(46349826-46349932)
chr3 (80-196)||(24775554-24775670)
chr3 (80-196)||(50300246-50300362)
[»] chr4 (42 HSPs)
chr4 (1-196)||(6641702-6641897)
chr4 (1-200)||(40846113-40846313)
chr4 (5-200)||(55380304-55380500)
chr4 (18-194)||(11915720-11915896)
chr4 (1-196)||(37435432-37435628)
chr4 (1-200)||(45833408-45833608)
chr4 (1-196)||(16632458-16632654)
chr4 (1-200)||(19884716-19884915)
chr4 (9-197)||(41114676-41114864)
chr4 (5-200)||(19620962-19621158)
chr4 (5-196)||(14604807-14605000)
chr4 (1-200)||(29680441-29680641)
chr4 (1-145)||(15139296-15139442)
chr4 (36-200)||(37985544-37985709)
chr4 (36-200)||(12601115-12601280)
chr4 (1-195)||(413021-413214)
chr4 (36-199)||(9140927-9141091)
chr4 (3-200)||(10072949-10073146)
chr4 (4-161)||(14833449-14833607)
chr4 (1-200)||(3395604-3395804)
chr4 (36-200)||(19666386-19666551)
chr4 (3-147)||(23750587-23750732)
chr4 (1-195)||(17247263-17247455)
chr4 (1-200)||(56034588-56034788)
chr4 (1-200)||(12811075-12811272)
chr4 (38-196)||(22675454-22675613)
chr4 (1-196)||(10692869-10693063)
chr4 (1-196)||(10906635-10906829)
chr4 (1-196)||(13576013-13576207)
chr4 (9-200)||(17540409-17540598)
chr4 (1-82)||(22089721-22089801)
chr4 (98-196)||(29121388-29121486)
chr4 (5-196)||(19911781-19911974)
chr4 (1-200)||(14904253-14904453)
chr4 (1-59)||(23123587-23123645)
chr4 (80-196)||(8105655-8105772)
chr4 (79-199)||(11901202-11901322)
chr4 (80-196)||(54679948-54680064)
chr4 (126-196)||(16853521-16853591)
chr4 (79-196)||(3483739-3483856)
chr4 (40-200)||(17787990-17788144)
chr4 (100-196)||(56533058-56533155)
[»] chr6 (38 HSPs)
chr6 (17-196)||(10640364-10640544)
chr6 (1-196)||(19470694-19470889)
chr6 (18-200)||(15987253-15987437)
chr6 (6-200)||(23284584-23284779)
chr6 (1-200)||(20112628-20112829)
chr6 (1-196)||(13435556-13435752)
chr6 (1-196)||(15531553-15531749)
chr6 (1-200)||(24116848-24117049)
chr6 (55-196)||(26943600-26943741)
chr6 (1-196)||(9717867-9718063)
chr6 (1-200)||(13602192-13602392)
chr6 (1-200)||(15302220-15302420)
chr6 (1-200)||(19623999-19624199)
chr6 (1-196)||(32544289-32544485)
chr6 (39-200)||(18378334-18378496)
chr6 (5-196)||(14100373-14100565)
chr6 (5-196)||(29918041-29918232)
chr6 (18-200)||(21625121-21625303)
chr6 (1-200)||(12715348-12715549)
chr6 (5-196)||(19688790-19688980)
chr6 (1-196)||(26972157-26972351)
chr6 (1-141)||(25597558-25597699)
chr6 (126-200)||(19086178-19086252)
chr6 (98-196)||(20487945-20488043)
chr6 (67-200)||(25930493-25930626)
chr6 (1-196)||(18435580-18435776)
chr6 (36-196)||(16877237-16877398)
chr6 (39-196)||(20730671-20730829)
chr6 (80-196)||(15954727-15954843)
chr6 (133-196)||(25594092-25594155)
chr6 (68-144)||(17927864-17927941)
chr6 (1-196)||(21618268-21618462)
chr6 (129-196)||(22802165-22802232)
chr6 (126-196)||(16265205-16265275)
chr6 (126-196)||(21235149-21235219)
chr6 (119-200)||(12423281-12423362)
chr6 (80-196)||(19833041-19833158)
chr6 (155-200)||(22076491-22076536)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-201)||(6026-6226)
[»] chr1 (40 HSPs)
chr1 (1-196)||(17024826-17025021)
chr1 (24-196)||(12613700-12613871)
chr1 (37-196)||(21191763-21191922)
chr1 (1-200)||(33256212-33256412)
chr1 (1-200)||(33276384-33276584)
chr1 (1-196)||(22153880-22154076)
chr1 (5-200)||(28492269-28492465)
chr1 (1-200)||(12284442-12284642)
chr1 (8-199)||(10757441-10757634)
chr1 (1-193)||(48704230-48704423)
chr1 (1-200)||(20954334-20954534)
chr1 (1-200)||(1577886-1578086)
chr1 (1-196)||(19717547-19717743)
chr1 (1-200)||(22600043-22600243)
chr1 (1-200)||(32785799-32785998)
chr1 (11-196)||(18896468-18896654)
chr1 (1-200)||(21028812-21029012)
chr1 (1-196)||(26701990-26702186)
chr1 (1-200)||(38282586-38282785)
chr1 (15-196)||(1900368-1900550)
chr1 (1-196)||(22427220-22427414)
chr1 (1-195)||(2834714-2834907)
chr1 (119-200)||(22201716-22201797)
chr1 (36-196)||(29215820-29215981)
chr1 (1-196)||(2268554-2268747)
chr1 (79-196)||(39200932-39201049)
chr1 (1-200)||(30893111-30893312)
chr1 (18-196)||(35401832-35402011)
chr1 (38-196)||(22464706-22464866)
chr1 (38-196)||(2267112-2267271)
chr1 (18-196)||(36134213-36134391)
chr1 (119-196)||(14263431-14263508)
chr1 (119-196)||(25448546-25448623)
chr1 (37-196)||(16235193-16235353)
chr1 (80-196)||(35040189-35040305)
chr1 (18-196)||(23036405-23036584)
chr1 (1-200)||(21702833-21703030)
chr1 (129-200)||(46089008-46089079)
chr1 (129-200)||(48570221-48570292)
chr1 (1-90)||(10251106-10251193)
[»] chr7 (56 HSPs)
chr7 (37-202)||(13880602-13880768)
chr7 (9-196)||(13893949-13894136)
chr7 (1-196)||(39284507-39284702)
chr7 (1-200)||(16316499-16316699)
chr7 (1-193)||(21695424-21695617)
chr7 (1-200)||(29935301-29935500)
chr7 (1-196)||(44467084-44467281)
chr7 (9-196)||(19236994-19237181)
chr7 (1-198)||(13302828-13303026)
chr7 (5-196)||(9098205-9098384)
chr7 (1-196)||(10883115-10883311)
chr7 (1-200)||(13137837-13138037)
chr7 (8-200)||(13730624-13730817)
chr7 (1-200)||(11792923-11793123)
chr7 (1-196)||(22577963-22578159)
chr7 (1-200)||(13018449-13018647)
chr7 (5-200)||(13648745-13648941)
chr7 (1-200)||(15088536-15088736)
chr7 (5-196)||(30945304-30945494)
chr7 (1-200)||(2913550-2913750)
chr7 (1-196)||(21283315-21283511)
chr7 (1-196)||(24788161-24788357)
chr7 (1-196)||(28409059-28409255)
chr7 (1-196)||(41842216-41842411)
chr7 (1-208)||(28622300-28622506)
chr7 (5-196)||(21692307-21692499)
chr7 (3-193)||(15467939-15468130)
chr7 (5-196)||(30944271-30944461)
chr7 (38-200)||(13880120-13880283)
chr7 (24-199)||(13032039-13032213)
chr7 (1-196)||(9069582-9069778)
chr7 (1-200)||(23279901-23280100)
chr7 (95-201)||(30025920-30026026)
chr7 (36-200)||(2500054-2500219)
chr7 (1-196)||(12366690-12366886)
chr7 (119-199)||(16309968-16310048)
chr7 (1-196)||(9709746-9709940)
chr7 (22-200)||(5000784-5000964)
chr7 (1-108)||(13692450-13692558)
chr7 (124-200)||(16111950-16112026)
chr7 (1-196)||(33691654-33691850)
chr7 (126-196)||(4821494-4821564)
chr7 (1-196)||(48236846-48237040)
chr7 (1-200)||(11319421-11319621)
chr7 (5-88)||(4494634-4494718)
chr7 (80-196)||(14426567-14426683)
chr7 (98-196)||(35952728-35952826)
chr7 (80-196)||(12174362-12174479)
chr7 (119-196)||(33605705-33605782)
chr7 (94-201)||(14193129-14193236)
chr7 (1-196)||(331665-331860)
chr7 (127-200)||(13260684-13260757)
chr7 (129-200)||(1293046-1293117)
chr7 (1-90)||(14425564-14425651)
chr7 (129-200)||(16412008-16412078)
chr7 (119-197)||(19711074-19711152)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-196)||(9980-10176)
[»] chr8 (45 HSPs)
chr8 (1-196)||(33082873-33083069)
chr8 (18-196)||(43644912-43645090)
chr8 (4-196)||(19707522-19707714)
chr8 (1-196)||(17701761-17701957)
chr8 (1-200)||(18321098-18321298)
chr8 (1-200)||(19156208-19156408)
chr8 (1-200)||(39693547-39693747)
chr8 (11-196)||(19956289-19956476)
chr8 (1-201)||(16681242-16681443)
chr8 (1-200)||(16207318-16207518)
chr8 (1-200)||(12757702-12757902)
chr8 (11-200)||(22461588-22461777)
chr8 (1-200)||(602659-602859)
chr8 (1-200)||(16188996-16189196)
chr8 (13-200)||(18722597-18722785)
chr8 (13-200)||(18730942-18731130)
chr8 (1-200)||(24646350-24646550)
chr8 (1-196)||(23185167-23185361)
chr8 (1-200)||(17267486-17267685)
chr8 (37-200)||(17914471-17914635)
chr8 (1-148)||(18121048-18121196)
chr8 (1-200)||(20382333-20382533)
chr8 (1-196)||(19943251-19943449)
chr8 (1-196)||(17797438-17797632)
chr8 (5-196)||(23263554-23263747)
chr8 (1-199)||(17525667-17525867)
chr8 (13-200)||(18685348-18685536)
chr8 (17-201)||(18679826-18680011)
chr8 (1-200)||(17441747-17441946)
chr8 (1-200)||(18719013-18719213)
chr8 (1-196)||(21932899-21933095)
chr8 (1-196)||(30421369-30421564)
chr8 (1-196)||(15336029-15336223)
chr8 (1-196)||(15425094-15425288)
chr8 (1-196)||(15516398-15516592)
chr8 (79-200)||(29693327-29693448)
chr8 (128-200)||(14989518-14989590)
chr8 (80-196)||(45538458-45538574)
chr8 (36-153)||(20255539-20255657)
chr8 (1-59)||(22745641-22745699)
chr8 (80-196)||(1237653-1237769)
chr8 (128-200)||(18151713-18151785)
chr8 (80-196)||(24551290-24551406)
chr8 (128-200)||(22673790-22673862)
chr8 (128-200)||(40845454-40845526)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-196)||(9927-10122)
scaffold0047 (4-161)||(30283-30441)
[»] scaffold0004 (3 HSPs)
scaffold0004 (9-196)||(244185-244371)
scaffold0004 (1-196)||(220262-220457)
scaffold0004 (1-200)||(377450-377650)
[»] chr5 (36 HSPs)
chr5 (1-200)||(642629-642828)
chr5 (9-196)||(25096753-25096943)
chr5 (9-196)||(25154723-25154913)
chr5 (2-200)||(23881083-23881281)
chr5 (1-196)||(21198926-21199120)
chr5 (1-201)||(21072162-21072362)
chr5 (1-200)||(23412895-23413095)
chr5 (1-200)||(6499255-6499453)
chr5 (1-196)||(7745614-7745810)
chr5 (1-200)||(17814984-17815184)
chr5 (1-200)||(21910572-21910772)
chr5 (1-196)||(21099626-21099821)
chr5 (1-199)||(6512352-6512548)
chr5 (5-196)||(20550915-20551107)
chr5 (1-200)||(89343-89543)
chr5 (5-200)||(41566359-41566555)
chr5 (79-200)||(12352795-12352916)
chr5 (1-200)||(9398666-9398855)
chr5 (38-196)||(33022684-33022843)
chr5 (1-196)||(11993908-11994102)
chr5 (6-200)||(19536226-19536422)
chr5 (15-194)||(13545455-13545627)
chr5 (1-196)||(26784374-26784570)
chr5 (126-196)||(4887042-4887112)
chr5 (5-196)||(31117897-31118088)
chr5 (1-196)||(42243700-42243895)
chr5 (79-200)||(16607528-16607648)
chr5 (128-201)||(25930205-25930278)
chr5 (119-196)||(30743000-30743077)
chr5 (129-201)||(28464389-28464461)
chr5 (120-195)||(26765519-26765594)
chr5 (80-192)||(14086539-14086652)
chr5 (103-196)||(32160786-32160879)
chr5 (128-200)||(9088985-9089057)
chr5 (120-196)||(26759169-26759245)
chr5 (128-200)||(29138455-29138527)
[»] scaffold0022 (3 HSPs)
scaffold0022 (5-201)||(159074-159270)
scaffold0022 (1-148)||(39497-39645)
scaffold0022 (1-148)||(137557-137705)
[»] scaffold0081 (1 HSPs)
scaffold0081 (11-196)||(40661-40846)
[»] chr2 (51 HSPs)
chr2 (1-193)||(22454876-22455069)
chr2 (1-196)||(23595456-23595649)
chr2 (1-200)||(18376792-18376992)
chr2 (1-196)||(41121606-41121801)
chr2 (1-200)||(24377115-24377315)
chr2 (1-200)||(25829148-25829348)
chr2 (11-200)||(26618998-26619187)
chr2 (14-196)||(25189416-25189598)
chr2 (1-200)||(19540430-19540630)
chr2 (1-200)||(22272146-22272346)
chr2 (1-200)||(44881181-44881380)
chr2 (1-198)||(20568636-20568834)
chr2 (9-194)||(18430835-18431020)
chr2 (1-200)||(21537134-21537334)
chr2 (5-200)||(30667003-30667199)
chr2 (1-196)||(39037528-39037724)
chr2 (1-200)||(13963864-13964064)
chr2 (1-200)||(23235021-23235221)
chr2 (10-200)||(19115097-19115287)
chr2 (1-200)||(10009635-10009836)
chr2 (1-200)||(22187988-22188188)
chr2 (1-200)||(25037145-25037345)
chr2 (1-200)||(25041252-25041452)
chr2 (4-200)||(9015259-9015454)
chr2 (1-196)||(24850551-24850748)
chr2 (12-200)||(18702752-18702940)
chr2 (37-196)||(20151957-20152117)
chr2 (1-196)||(24576053-24576250)
chr2 (1-196)||(23184199-23184386)
chr2 (37-200)||(30621230-30621394)
chr2 (37-200)||(30623851-30624015)
chr2 (1-196)||(6574010-6574206)
chr2 (5-200)||(28140509-28140705)
chr2 (18-196)||(38781417-38781596)
chr2 (79-200)||(40782491-40782612)
chr2 (126-196)||(28711710-28711780)
chr2 (1-196)||(22317611-22317808)
chr2 (119-200)||(31800892-31800973)
chr2 (40-200)||(24779357-24779518)
chr2 (128-200)||(3277044-3277116)
chr2 (129-200)||(14581529-14581600)
chr2 (129-200)||(22776303-22776374)
chr2 (129-200)||(22781681-22781752)
chr2 (129-200)||(28550933-28551004)
chr2 (129-200)||(44840448-44840519)
chr2 (1-59)||(7609118-7609176)
chr2 (119-193)||(28701234-28701308)
chr2 (80-196)||(6392651-6392768)
chr2 (103-200)||(10896422-10896518)
chr2 (133-196)||(30557339-30557403)
chr2 (80-196)||(45087150-45087266)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-200)||(49352-49552)
scaffold0084 (15-200)||(32505-32691)
scaffold0084 (103-196)||(339-432)
[»] scaffold0040 (1 HSPs)
scaffold0040 (9-200)||(1421-1612)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-201)||(60035-60236)
scaffold0026 (3-200)||(7946-8144)
scaffold0026 (22-147)||(151783-151908)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-196)||(1684-1880)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-200)||(36076-36275)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-196)||(9998-10195)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-200)||(495-695)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-200)||(18512-18712)
[»] scaffold0337 (1 HSPs)
scaffold0337 (36-196)||(14672-14833)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-201)||(36666-36867)
scaffold0120 (1-201)||(42138-42339)
[»] scaffold0065 (1 HSPs)
scaffold0065 (36-196)||(1714-1875)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-200)||(5581-5781)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-200)||(15137-15337)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-200)||(20862-21062)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-200)||(25866-26066)
scaffold0083 (98-163)||(44693-44758)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-196)||(27320-27516)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-197)||(19363-19560)
scaffold0035 (68-200)||(29814-29945)
[»] scaffold0005 (2 HSPs)
scaffold0005 (5-196)||(212378-212571)
scaffold0005 (4-161)||(6092-6250)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-200)||(12229-12429)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-196)||(4838-5034)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-196)||(22700-22896)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-196)||(9993-10189)
[»] scaffold0273 (1 HSPs)
scaffold0273 (12-196)||(5651-5834)
[»] scaffold0012 (1 HSPs)
scaffold0012 (80-196)||(215468-215584)
[»] scaffold0023 (1 HSPs)
scaffold0023 (2-196)||(103596-103791)
[»] scaffold0426 (1 HSPs)
scaffold0426 (79-200)||(13591-13712)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-201)||(74600-74787)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-192)||(89948-90138)
scaffold0003 (129-200)||(720-790)
[»] scaffold0043 (1 HSPs)
scaffold0043 (80-196)||(78337-78453)
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-201)||(15812-16011)
[»] scaffold0217 (2 HSPs)
scaffold0217 (36-196)||(19055-19216)
scaffold0217 (128-200)||(22150-22222)
[»] scaffold1359 (2 HSPs)
scaffold1359 (80-196)||(626-742)
scaffold1359 (1-90)||(1658-1745)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-196)||(7727-7923)
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-153)||(677-830)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-190)||(9825-10015)
[»] scaffold1747 (1 HSPs)
scaffold1747 (127-200)||(1337-1410)
[»] scaffold1745 (1 HSPs)
scaffold1745 (127-200)||(1-74)
[»] scaffold0530 (1 HSPs)
scaffold0530 (141-200)||(2027-2086)
[»] scaffold0078 (1 HSPs)
scaffold0078 (40-196)||(31715-31871)
[»] scaffold0439 (1 HSPs)
scaffold0439 (126-196)||(6757-6827)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-200)||(60823-61021)
[»] scaffold1331 (1 HSPs)
scaffold1331 (80-196)||(1670-1786)
[»] scaffold0176 (1 HSPs)
scaffold0176 (128-200)||(9175-9247)
[»] scaffold0028 (1 HSPs)
scaffold0028 (119-196)||(5612-5689)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-49)||(5830-5878)


Alignment Details
Target: scaffold0064 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 43822 - 44010
Alignment:
Q  12 tgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgc 111  Q
    ||||| ||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  ||    
T  43822 tgaagatcatcagaagatgagagacttaaaacttcaaaggctgttcaaaagatttaatcacgcctaacattgcagaagatcagaagagtgaagcaaaggc 43921  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43922 taattcaaaaagatttgaaggcattggatgcctgttccttgaagagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 44010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 19249361 - 19249547
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||  ||||||||||||||||    
T  19249361 agctgaagatcattagaagatgagagacttaaagcttcaaaggttgttcaaacgatttaatcacgcctagcattgcagaagaccagaagagtgaagcaac 19249460  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccact 195  Q
     ||||||||||||||| |||||||||||||||| |||||| |||| ||||| ||||| |||||| ||||||||| ||||||||||||    
T  19249461 agctaattcaaaaggatttgaaggcattggatgtttgttctttgaagagcgctgaaataggacaattgtacgaagtgtacaaccact 19249547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20725305 - 20725106
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||| ||| ||||||  ||||||||||||||| ||||||||||||  ||||||| ||| ||||||||||||  ||||||||    
T  20725305 tcaccagaagctgaagatcatcataagctgagagaattaaagcttcaaaggctgttcaaaagatctaatcacgtctagcattgcagaagaccagaagagt 20725206  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||  |||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||  ||||||||    
T  20725205 gaagcaacgactaattcaaaaggatttgaagacattggatgcttgtttcttgaagagcgttgaaaaaggacaattgtacgaagtgtacaataactatctc 20725106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 12388821 - 12389008
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||||| |||| ||||| | |||  |||||||||||| |||| |||||||| ||    
T  12388821 agctgaagatcataagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcatgtctagaattgcagaagatcagaacagtgaagctac 12388920  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      |||||||||||| | || |||||||||||||||| ||| |||| ||||||||  |||||||| ||||||||| |||||||||||||    
T  12388921 gactaattcaaaagaattttaaggcattggatgcttcttctttgaagagcgttggcaaaggacaattgtacgaagtgtacaaccacta 12389008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16032742 - 16032548
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    ||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||| || |||||||||  || |||||    
T  16032742 tcacccgaagttgaagt-catcagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcatgcctatcactgcagaagaccaggagagt 16032644  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | | ||||  ||| ||  |||||| ||||||||||||||||||||||| |||| |||| |||| |||| ||| ||||||||| |||||||||||||    
T  16032643 gtatcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccacta 16032548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29951378 - 29951578
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||  |||| |||| || |||| ||||| ||||||  ||| |||    
T  29951378 tcactagaagctgaagttcatcagaagacgagagacttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcattgtagaagaccagaggag 29951477  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||| ||| | |||| ||| |||||| || ||||||||||||||||    
T  29951478 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatct 29951577  T
Q  200 c 200  Q
    |    
T  29951578 c 29951578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 30000532 - 30000732
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||  |||| |||| || |||| ||||| ||||||  ||| |||    
T  30000532 tcactagaagctgaagttcatcagaagacgagagacttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcattgtagaagaccagaggag 30000631  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||| ||| | |||| ||| |||||| || ||||||||||||||||    
T  30000632 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatct 30000731  T
Q  200 c 200  Q
    |    
T  30000732 c 30000732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 49642702 - 49642902
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || |||||||||||||||||||||||| ||||| |||| || |||| ||||||||||||   ||||||    
T  49642702 tcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaagag 49642801  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| |||||||||||||||| |||||| || | ||||||||| |||| ||| |||||| || ||||||||||||||||    
T  49642802 tgaagcaacgactattttgaaaggatttgaaggcattggatgattgttcttttaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatct 49642901  T
Q  200 c 200  Q
    |    
T  49642902 c 49642902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 6090951 - 6090755
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || |||||| |||||||||||| ||||  |||| |||| || |||| ||||||||||||  |||||||    
T  6090951 tcaccagaagctgaagttcatcaggagatgcaagacttaaaacttcaaaggttgctcaatggatttaatctcgtctaagcattgcagaagactagaagag 6090852  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||||||  |||||| |||||||||||| |||||||||| || |  ||| |||| |||| ||| ||||||||| |||||||||||||    
T  6090851 tgaagcaacatctaatttgaaaggatttgaaggcattgaatgcttgttctttaaaaagctttgacaaagtacaattgtacgaagtgtacaaccacta 6090755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 14392944 - 14393144
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| |||||||||||||||| || ||||   || ||||||| ||||||||||||||||  |||| |||| || |||| ||||||||||||  |||||||    
T  14392944 tcactagaagctgaagttcattaggagatacaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagaccagaagag 14393043  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||| ||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  14393044 tgaaacaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 14393143  T
Q  200 c 200  Q
    |    
T  14393144 c 14393144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 26417631 - 26417818
Alignment:
Q  12 tgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgc 111  Q
    ||||| |||||||||| ||| ||  || ||||||||||| ||||||||| | || ||||||||||| |||| |||||||  |||||| ||||||||| ||    
T  26417631 tgaagatcatcagaagctgaaagaattgaagcttcaaagtttgttcaaatgttttaatcacgcctatcattccagaagactagaagaatgaagcaacggc 26417730  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||||| | ||||||||||||||||||  ||| |||  || ||||| |||| |||| |||||| || ||||||||||||||||    
T  26417731 taattcaaaagaatttgaaggcattggatgctcattctttggagaacgttggaaaatgacaattgtacaaagtgtacaaccactatct 26417818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 41495179 - 41495018
Alignment:
Q  40 aagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattgg 138  Q
    |||||||||||| |||||||  |||| |||| || |||| ||||||||||||   |||||||||||||||  ||| ||  |||||| |||||||||||||    
T  41495179 aagcttcaaaggctgttcaatggatttaatctcgtctaaacattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 41495080  T
Q  139 atgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  41495079 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 41495018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13948555 - 13948355
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||| ||||||| |||||  || |||||||| ||||||| |||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  13948555 tcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgcagaagactggaatag 13948456  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||| |||||    
T  13948455 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccattatct 13948356  T
Q  200 c 200  Q
    |    
T  13948355 c 13948355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 37467552 - 37467352
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||| | |||||||||| |||||  |  |||||| |||||||| ||||||||  |||| |||| |  |||| ||||| ||||||   ||||||    
T  37467552 tcaccagaagcagtagttcatcaggagatgcaaaacttaaatcttcaaagcttgttcaatggatttaatctcatctaagcattgtagaagactggaagag 37467453  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  37467452 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 37467353  T
Q  200 c 200  Q
    |    
T  37467352 c 37467352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17238862 - 17239062
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| |||||| ||| || |||||  || |||||||||||||||| || ||||  |||| |||| || |||| ||||||||||||  |||||||    
T  17238862 tcaccagaagatgaagtgcataaggagatgcaagacttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccagaagag 17238961  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||| |  ||| ||  |||||| ||||| |||||||||| |||||| ||||  |||||||| |||| ||| ||||||||| ||||||||||||||||    
T  17238962 tgaagcatcgactattttgaaaggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 17239061  T
Q  200 c 200  Q
    |    
T  17239062 c 17239062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 23538146 - 23538306
Alignment:
Q  40 aagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattgga 139  Q
    ||||||||||| ||||||||| | || ||||||||||| ||||||||||||   ||||| |||| |||| | || |||||||| | |||||||||||| |    
T  23538146 aagcttcaaagtttgttcaaatgttttaatcacgcctatcattgcagaagactggaagaatgaaacaacggttatttcaaaagaatttgaaggcattgaa 23538245  T
Q  140 tgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| ||| ||   || ||||||||||||||| ||||||||| |||||||||||||||||    
T  23538246 tgcttattctttagagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctc 23538306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 12968506 - 12968325
Alignment:
Q  19 catcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattca 118  Q
    ||||||||| ||| ||  || ||||||||||||||||| ||| | || ||||||  ||| ||||||||||||  |||||  ||||| |||  ||||||||    
T  12968506 catcagaagctgaaagatttgaagcttcaaaggttgtttaaatgttttaatcacatctatcattgcagaagactagaagcatgaagtaacgactaattca 12968407  T
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||| | ||||||||||||||| ||| ||| |||| || ||||| ||||||||| || |||||| |||||||||||||||||    
T  12968406 aaagaatttgaaggcattggatacttattctttgaagaacgttggaaaaggacaattatacgaagtgtacaaccactatctc 12968325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 38177618 - 38177779
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    ||||||||||||||||||||||||   ||| |||| || || | || ||||||||||  |||||||||||||||  ||| ||  |||||| |||||||||    
T  38177618 cttaaagcttcaaaggttgttcaatgaatttaatctcgtctgagcaatgcagaagattggaagagtgaagcaacaactattttgaaaggatttgaaggca 38177717  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||||| || | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  38177718 ttggatgcttgttctttaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 38177779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 52920624 - 52920424
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||| |||||||| || ||||  |||| |||| || |||| ||||||||||||  |||||||    
T  52920624 tcaccagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggctgctcaatggatttaatctcgtctaagcattgcagaagactagaagag 52920525  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||||||  |||| | ||||||||||| ||||||||||| || | ||||||||| |||  | | ||||||||| | ||||||||||| ||    
T  52920524 tgaagcaacaactaatt-taaagtatttgaaggcatttgatgcttgttctttaaagagcgttgacaaattaaaattgtacgaagtatacaaccactacct 52920426  T
Q  200 ct 201  Q
    ||    
T  52920425 ct 52920424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 2561407 - 2561211
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  2561407 tcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 2561308  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||  ||||||||||||||| |  | || |||||| |||| |||  |||||||| |||||||||||||    
T  2561307 tgaagcaacaactattttgaaaggatttgaagaaattggatgcttgttcttcaaagatcgttgacaaagtacaagtgtacgaagtgtacaaccacta 2561211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 47207924 - 47207729
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa--cattgcagaagatgagaaga 98  Q
    ||||||||||||| |||||||||| |||||  |  | |||| |||||||||||||||||  |||| |||| || ||||  ||||||||||||   ||| |    
T  47207924 tcaccagaagctgcagttcatcaggagatgcaa--cataaaacttcaaaggttgttcaatggatttaatctcgtctaaagcattgcagaagactggaaaa 47207827  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||| |||| ||  ||| || ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  47207826 gtgaagcaacggctagtttgaaatgatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 47207729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12963025 - 12963225
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || ||||||||||||| ||||||||||  |||| ||||  | |||| || |||||||||   | ||||    
T  12963025 tcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaagggttgttcaagggatttaatcttgtctaagcaatgcagaagactgggagag 12963124  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| || | ||||  ||||| ||||||||||||||||| |||| ||| ||||| | || ||| ||||||||| ||||||||||||||||    
T  12963125 tgaagcaacaactattttagaaggttttgaaagcattggatgcttgttctttgaagagtgttgacatagtacaattgtacgaagtgtacaaccactatct 12963224  T
Q  200 c 200  Q
    |    
T  12963225 c 12963225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14969546 - 14969346
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  ||||||| || | |||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  14969546 tcaccagaagctctagttcatgaggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 14969447  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    | |||||||  ||| ||  |||||| |||| |||||||||||||| ||| |  |  |||||||| |||| |||||| |||||| ||||||||||||||||    
T  14969446 taaagcaacaactattttgaaaggatttgatggcattggatgcttattcttcaaatagcgttgacaaagtacatttttacgaagtgtacaaccactatct 14969347  T
Q  200 c 200  Q
    |    
T  14969346 c 14969346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 28582325 - 28582129
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  | |||||||| |||||  || |||||||||||||||| |||||||  |||| |||| || |||  |||||||||||||  ||||||    
T  28582325 tcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagattggaagag 28582226  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| || | |||||||||||||||||| |  | ||||||||| |||  ||| ||||||||| |||||||||||||    
T  28582225 tgaagcaacgactattttgaaaggatttaatggcattggatgcttgttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccacta 28582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 13780603 - 13780724
Alignment:
Q  79 cattgcagaaga-tgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgt 177  Q
    |||||||||||| ||| ||||||||||||||  ||| ||  |||||| ||||||||||||||||||||||  |||| ||||||||| |||| ||| ||||    
T  13780603 cattgcagaagactga-aagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttatttgaagagcgttgacaaagtacaattgt 13780701  T
Q  178 acgaattgtacaaccactatctc 200  Q
    ||||| |||||||||||||||||    
T  13780702 acgaagtgtacaaccactatctc 13780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 31303605 - 31303405
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||  ||||  |||| |||||| || |||||||||| |||||||||||||   ||| |||| || |||| |||||||||||| ||| ||||    
T  31303605 tcaccagaagctctagttactcaggagatgaaagacttaaagctttaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactga-aaga 31303507  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||| |||  ||| ||  |||||| |||||| |||| |||| |||||| |||| ||||||||| |||| ||| ||||||||| |||||||| ||||||    
T  31303506 gtgaaggaacaactattttgaaaggatttgaagacatttgatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatc 31303407  T
Q  199 tc 200  Q
    ||    
T  31303406 tc 31303405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 22804056 - 22804163
Alignment:
Q  93 agaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacc 192  Q
    |||||||||||||||| |||| ||  |||||| ||||||||||| |||| |||||| |||| ||||||||| |||| ||| ||||||||| |||| ||||    
T  22804056 agaagagtgaagcaacggctattttgaaaggacttgaaggcattcgatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaacc 22804155  T
Q  193 actatctc 200  Q
    ||||||||    
T  22804156 actatctc 22804163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 13824253 - 13824092
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    ||||||||||||||||||||||||  |||| |||| || |||| || || ||||||   |||||||||||||||  ||| ||  ||| || |||||||||    
T  13824253 cttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacaatgaagaagactggaagagtgaagcaacaactattttgaaatgatttgaaggca 13824154  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||| |||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  13824153 ttggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15903418 - 15903217
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||| |||||| | || ||||| |||||  || |||||||||||||| | |||||||  |||| |||| || |||| |||| |||||||  |||||||    
T  15903418 tcaccaaaagctgtaatttatcaggagatgcaagacttaaagcttcaaacgctgttcaatggattcaatctcgtctaagcattacagaagactagaagag 15903319  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgc-ttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||||||  ||| ||  |||||| ||||| |||||| |||| |||||| |||| |||| |||| |||| ||| ||||||||| |||||||| ||||||    
T  15903318 tgaagcaacgactattttgaaaggatttgaaagcattgcatgctttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaacaactatc 15903219  T
Q  199 tc 200  Q
    ||    
T  15903218 tc 15903217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 20646294 - 20646177
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    ||||| ||||||  ||||||||||||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| | || ||| |||||    
T  20646294 cattgtagaagaccagaagagtgaagcaacgtctattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgta 20646195  T
Q  179 cgaattgtacaaccacta 196  Q
    |||| |||||||||||||    
T  20646194 cgaagtgtacaaccacta 20646177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 18121562 - 18121758
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  ||  |||||||||||||||||||||||  |||| |||| ||  | | ||||||||||||   ||||||    
T  18121562 tcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggttgttcaatggattcaatctcgtttgagcattgcagaagactggaagag 18121661  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| || ||||||||| |||||| ||| |  | ||||||| | |||| ||| ||||||||| |||||||||||||    
T  18121662 tgaagcaacaactattttgaaaggatttaaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccacta 18121758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 49553429 - 49553625
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||| |||||||||||| |||||  || ||||||| |||||||| |||| || ||||| ||   || |||| |||||||||||||   |||||    
T  49553429 tcaccagaagccgaagttcatcaggagatgcaagacttaaagtttcaaaggctgtttaatagatttaacatcgtctaagcattgcagaagattgaaagag 49553528  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||    ||| ||  |||||| |||||||||||||||| |||||| |    ||||||||| |||| ||| ||||||||| |||||||||||||    
T  49553529 tgaagcagtgactattttgaaaggatttgaaggcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 49553625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 16658558 - 16658754
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || ||| || |||||||||||||||||  |||| |||| || | || |||| || ||||  |||  ||    
T  16658558 tcaccagaagttgtagttcatcaggagatgcaagacttgaaacttcaaaggttgttcaattgattcaatctcgtccaagcattacaaaagaccagagcag 16658657  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||| ||||||||||||| ||| |||| ||||||||| | |  ||| ||||||||| |||||||||||||    
T  16658658 tgaagcaacgactattttgaaaggatttgaaagcattggatgcttattctttgaagagcgttgacataatacaattgtacgaagtgtacaaccacta 16658754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 11223684 - 11223582
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactat 197  Q
    |||||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| |  |||||||||| ||||||||||||||    
T  11223684 agtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtatgtttgtacgaagtgtacaaccactat 11223585  T
Q  198 ctc 200  Q
    |||    
T  11223584 ctc 11223582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 47405363 - 47405557
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||  |||||  |  | |||||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||| |     
T  47405363 tcaccagaagctgcagttcatcacgagatgcaa--cataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaaa 47405460  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||| |||| |||||| |  | ||| ||||| |||| ||| ||||||||| |||||||||||||    
T  47405461 tgaagcaacaactagtttgaaaggatttgaaggcatttgatgtttgttcttcaaagagtgttgacaaagtacaattgtacgaagtgtacaaccacta 47405557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 12726170 - 12726366
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||| ||||||||||||| ||||   || |||||||||||||||| | |||||  |||| |||| || |||| | ||||||||||  |||||||    
T  12726170 tcacaagaagttgaagttcatcaggagattcaagacttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactagaagag 12726269  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| |||  ||| ||  |||||| ||||| |||||||||||||  || || | ||| ||| | |||| ||| |||||| || |||||||||||||    
T  12726270 tgaagtaacgactattttgaaaggatttgaaagcattggatgcttactctttaaagagagttaacaaagtacaattgtacaaagtgtacaaccacta 12726366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 53056747 - 53056863
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||| | |||| || |||||||    
T  53056747 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtac 53056846  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  53056847 gaagtgtacaaccacta 53056863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 33583351 - 33583252
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||   | ||||||||| |||| || |||||||||| |||||||||||||    
T  33583351 agtgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 33583252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 40800056 - 40799897
Alignment:
Q  38 taaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    |||||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||| || ||||||||  ||| ||  |||| | ||||||| |||    
T  40800056 taaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagcgaagcaacgactagtttgaaagtatttgaaggaatt 40799957  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||| ||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  40799956 ggatacttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 40799897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 2785282 - 2785087
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  |  |||||||||||||| |||||| ||  |||| || | || ||||  |||||||||||   ||| ||    
T  2785282 tcaccagaagttgtagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaag 2785185  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||| |||||||||||||||||||   | ||||||||| | || || |||||||||| |||||||||||||    
T  2785184 tgaagcaacaactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 2785087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20627373 - 20627567
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  |  |||||||||||||| | |||| ||  |||| || | || ||||  |||||||||||   ||| ||    
T  20627373 tcaccagaagttgcagttcatcaggagatgcaa--cttaaagcttcaaaagatgtttaatggattcaaactcgtctaatgattgcagaagactggaaaag 20627470  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  || ||| ||||||||||||||||||||||  |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  20627471 tgaagcaacaactattttgaatggatttgaaggcattggatgcttgtttatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 20627567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 18142696 - 18142888
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    ||||||||  |||||||||| |||||  ||  ||||||||||||||| | |||||  |||| |||| ||  | | ||||||||||||   ||||||||||    
T  18142696 cagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctattcaatggattcaatctcgtttgagcattgcagaagactggaagagtgaa 18142795  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  |||||| || ||||||||| |||||| ||| |  | ||||||| | |||| ||| ||||||||| |||||||||||||    
T  18142796 gcaacaactattttgaaaggatttaaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccacta 18142888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 14955520 - 14955450
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||||||||| ||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  14955520 ttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 14955450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 29855530 - 29855432
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||| |||| ||  |||| | ||||||||||||||||||||||| |  |  |||||||| | || || |||||||||| |||||||||||||    
T  29855530 agtgaagcaacggctagtttgaaagaatttgaaggcattggatgcttgttcttcaaaaagcgttgacagagtacgtttgtacgaagtgtacaaccacta 29855432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 46349826 - 46349932
Alignment:
Q  43 cttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatg 141  Q
    ||||||| |||||||||  |||  |||| || |||| ||||||||||||   ||| |||||||||||  ||||||  |||||| ||||||||||||||||    
T  46349826 cttcaaaagttgttcaattgatccaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatg 46349925  T
Q  142 cttgttc 148  Q
    |||||||    
T  46349926 cttgttc 46349932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 24775554 - 24775670
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| |||||||||||| |||||| ||| |  | |||| |||| |||| || |||||||    
T  24775554 attgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattgaatgcttattcttcaaagagctttgacaaagtacgtttgtac 24775653  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  24775654 gaagtgtacaaccacta 24775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 50300362 - 50300246
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgac-gagcgttgaaaaaggacatttgta 178  Q
    |||||||||||   ||| |||||||||||||||| || ||  ||| ||||| ||||||||||  |||||||  |  ||||||||| |||| || ||||||    
T  50300362 attgcagaagactggaaaagtgaagcaactgctatttgaag-ggatttgaacgcattggatgtatgttcctcaaaagagcgttgacaaagtacgtttgta 50300264  T
Q  179 cgaattgtacaaccacta 196  Q
    |||| |||||||||||||    
T  50300263 cgaagtgtacaaccacta 50300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 3e-59; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 6641897 - 6641702
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||| ||||| ||||| ||||| ||||||| ||||||||    
T  6641897 tcaccagaagctgaatttcatcagaagatgagagatttaaagcttcaaaggttgttcaaaggatttaatcatgcctagcattgtagaagatcagaagagt 6641798  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||| |||| ||||||||||||||| ||||||||||| ||| ||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  6641797 gaaacaacggctaattcaaaaggatttgaaggcatttgatacttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 6641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 40846313 - 40846113
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagag 99  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||||  |||| ||||||||||| ||||||||||||  || | ||    
T  40846313 tcaccggaagctgaagttcatcagaagatgagagacttaaagcttcaaaaggctgttcaatggatttaatcacgcctagcattgcagaagaccaggaaag 40846214  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  |||||||||| | | ||||| |||||||||||||| |  |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  40846213 tgaagcaacgactaattcaaatgaagttgaaagcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 40846114  T
Q  200 c 200  Q
    |    
T  40846113 c 40846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 55380500 - 55380304
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaa 103  Q
    ||||||||||||||||| || |||||  || |||||||||||||| || |||||||  |||| ||||| ||||||||||||||||||  |||||||||||    
T  55380500 cagaagctgaagttcattaggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatcatgcctaacattgcagaagaccagaagagtgaa 55380401  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  55380400 gcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 55380304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 11915896 - 11915720
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattc 117  Q
    |||||||||| ||||||  || |||||||||||| || ||||| |||| ||||||||| | ||||||||||||  | ||||||||||||||  ||| |||    
T  11915896 tcatcagaagctgagagaattgaagcttcaaaggctgctcaaatgatttaatcacgcccatcattgcagaagactaaaagagtgaagcaacgactatttc 11915797  T
Q  118 aaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccac 194  Q
    ||| ||| ||||||||||||||||||| ||| |||| |||||||| ||||||||| |||||| || |||||||||||    
T  11915796 aaatggatttgaaggcattggatgcttattctttgaagagcgttggaaaaggacaattgtacaaagtgtacaaccac 11915720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 37435432 - 37435628
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || | || |||||||||||||  ||||||    
T  37435432 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgcagaagattggaagag 37435531  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| | || ||  ||||||||| |||||||||||||    
T  37435532 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccacta 37435628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 45833608 - 45833408
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  45833608 tcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 45833509  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    | |||||||| ||| ||  |||| | ||||| ||||||||||||| ||| || | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  45833508 ttaagcaacttctattttgaaagtatttgaatgcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 45833409  T
Q  200 c 200  Q
    |    
T  45833408 c 45833408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16632654 - 16632458
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||| ||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| ||  ||| ||||||||||||   ||||||    
T  16632654 tcactagaagctaaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagag 16632555  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||| ||||  ||| ||  ||| || ||||||||||||||| ||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  16632554 tgaatcaacgactattttgaaaagatttgaaggcattggattcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 16632458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19884915 - 19884716
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  || |||||||||||||||| ||||||   |||| |||| || |||| ||||||||||||   ||| ||    
T  19884915 tcaccagaagctgtagttcatcaggagatgcaagacttaaagcttcaaaggatgttcatg-gatttaatctcgtctaagcattgcagaagactggaaaag 19884817  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  19884816 tgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 19884717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 41114676 - 41114864
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||||||||| ||||||  || ||||||||||||||||||||  |||| ||||| ||||  ||||||| ||||  |||||| |||||||||    
T  41114676 agctgaagatcatcagaagctgagagaattgaagcttcaaaggttgttcaattgatttaatcaagcctgtcattgcaaaagactagaagaatgaagcaac 41114775  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactat 197  Q
     |||| |||||| | | ||||||||||||||||||| ||  |||  ||| |||||||||||||| |||||||   ||||||||||||||    
T  41114776 ggctatttcaaatgaatttgaaggcattggatgcttttttgttggagagagttgaaaaaggacaattgtacgtcgtgtacaaccactat 41114864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 19620962 - 19621158
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||||||||||||||||| |||||  ||  |||||||||||||||||||||||  |||| |||| || | || ||||||| ||||  |||  ||||||    
T  19620962 cagaagctgaagttcatcaggagatgcaagagttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagagaagtgaa 19621061  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||| ||  |||||| ||||| |||||||||||||||||  ||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  19621062 gcaacgactattttgaaaggatttgaaagcattggatgcttgttctatgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 19621158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 14604807 - 14605000
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||||| || |||||||| ||||   || |||||||||||||||| | ||| |  |||| |||| || |||| ||||||||||||  |||||||||||    
T  14604807 cagaagctaaacttcatcaggagatccaagacttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaa 14604906  T
Q  104 gcaactgctaattc-aaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  ||||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  14604907 gcaacaactatttttaaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 14605000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29680441 - 29680641
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||| | ||| |||||  || ||||||||| ||||||||||||||  |||| ||||  | |||| ||||||||||||   ||||||    
T  29680441 tcaccagaagctctagtttaccaggagatgcaagacttaaagctccaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagag 29680540  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||| || |||||    
T  29680541 tgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcattatct 29680640  T
Q  200 c 200  Q
    |    
T  29680641 c 29680641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15139442 - 15139296
Alignment:
Q  1 tcaccagaagctgaa-gttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||||||||| || |||||||||||||||| || ||||||| ||||||||||||||||  |||| |||| ||  ||| ||||||||||||  || |||    
T  15139442 tcaccagaagctaaaagttcatcagaagatgatagacttaaagattcaaaggttgttcaatggatttaatctcgtttaagcattgcagaagaccaggaga 15139343  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttg 145  Q
    ||||||||||  |||||||||| | | ||||||||||||||||||||    
T  15139342 gtgaagcaacgactaattcaaatgaagttgaaggcattggatgcttg 15139296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 37985544 - 37985709
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaagagtgaagcaactgctaattcaaaaggaattgaaggc 133  Q
    ||||||||||||||||||||||||  |||| |||| |  |||| ||| |||||||| ||| || |||||||||||  ||| ||  |||||| ||||||||    
T  37985544 cttaaagcttcaaaggttgttcaatggatttaatctcatctaagcatcgcagaagactgaaaa-agtgaagcaacaactattttgaaaggatttgaaggc 37985642  T
Q  134 attggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  37985643 attggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 37985709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 12601280 - 12601115
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    |||||||| ||||||| |||||||  |||| |||| || |||| ||||||||||||   ||| |||||| ||||  ||| ||  |||||| |||||||||    
T  12601280 cttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagacttgaatagtgaatcaacgactattttgaaaggatttgaaggca 12601181  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  12601180 ttggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 12601115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 413214 - 413021
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| ||||   |  |||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  413214 tcaccagaagctgcagttcatcaggagattcaa--cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcagaagactcgaaaag 413117  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccact 195  Q
    ||||||||| |||||||  |||||| |||||||||||| ||| |||||| |  | ||||||||| |||| ||  ||||||||| ||||||||||||    
T  413116 tgaagcaacggctaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccact 413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 9141091 - 9140927
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    ||||||||||||| ||||||||||  |||| |||| || |||| ||||| ||||||   ||| ||| |||||||  ||| ||  |||||| |||||||||    
T  9141091 cttaaagcttcaagggttgttcaatggattcaatctcgtctaagcattgtagaagactggaaaagtaaagcaacgactattttgaaaggatttgaaggca 9140992  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  9140991 ttggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 9140927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 10073146 - 10072949
Alignment:
Q  3 accagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtg 101  Q
    ||||||||| | |||||||||| |||||  || |||||||||||||||||||||||   |||| |||| ||  ||| ||| ||||||||   ||| ||||    
T  10073146 accagaagcagtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcatg-gatttaatctcgtttaagcatagcagaagactggaaaagtg 10073048  T
Q  102 aagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||| ||  |||||| |||||||||||||| |||||||  |  | ||||||||| |||| |||  |||||||| |||||||||||||||||    
T  10073047 aagcaactgctagtttgaaaggatttgaaggcattggaggcttgttattcaaagagcgttgacaaagtacaaatgtacgaagtgtacaaccactatctc 10072949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 14833607 - 14833449
Alignment:
Q  4 ccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    ||||||| || | |||||||| |||||  || |||||||||||||||| ||||||| ||||| |||| || |||| ||||||||||||   |||||||||    
T  14833607 ccagaagttgtaattcatcaggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtga 14833508  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgtt 161  Q
    ||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| |||||||    
T  14833507 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgtt 14833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 3395804 - 3395604
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    |||| |||||||  |||||||||| |||||  || |||||| ||||||| |||||||||  ||||||||  || |||| |||||||||| | ||| || |    
T  3395804 tcactagaagctatagttcatcaggagatgcaagacttaaatcttcaaaagttgttcaatggattaaatatcgtctaagcattgcagaaaactgaaaa-a 3395706  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  |||||| ||||| |||||||||||| |||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||    
T  3395705 gtgaagcaacgactattttgaaaggatttgaaagcattggatgctagttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatc 3395606  T
Q  199 tc 200  Q
    ||    
T  3395605 tc 3395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 19666551 - 19666386
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    |||||||||| ||||||| |||||  |||| |||| || |||| ||||||||||||   |||||||||||||||  ||| ||  |||||| ||||| |||    
T  19666551 cttaaagcttgaaaggttattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagca 19666452  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||| || ||||||| |||| ||| ||||| |||| ||| ||||||||| |||||||||||||||||    
T  19666451 ttgaatacttgttctttgaagagagttgacaaagtacaattgtacgaagtgtacaaccactatctc 19666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 23750732 - 23750587
Alignment:
Q  3 accagaagctgaagttcatcagaagatgagaggcttaaagcttc-aaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtg 101  Q
    |||||||||||||||||||||| |||||  || ||||||||||| |||||||||||||  |||| ||||||||||| || |||||||||  || ||||||    
T  23750732 accagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgcctagcactgcagaagaccaggagagtg 23750633  T
Q  102 aagcaactgctaattcaaaaggaattgaaggcattggatgcttgtt 147  Q
    |||||||  ||  |||||| | | || |||||||| ||||||||||    
T  23750632 aagcaacgactgcttcaaatgaagttaaaggcatttgatgcttgtt 23750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 17247455 - 17247263
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| ||||||    |||||||||||||| |||||||||  |||| |||| || |||| |||||||||||||  ||| ||    
T  17247455 tcaccagaagctgcagttcatcaggagatgaat--cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcagaagattggaa-ag 17247359  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccact 195  Q
    |||||||||  ||||||  |||||| |||||||||||| ||| |||||| |  | || | |||| |||| ||| ||||||||| ||||||||||||    
T  17247358 tgaagcaacgactaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagaacattgacaaagtacaattgtacgaagtgtacaaccact 17247263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 56034788 - 56034588
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacg-cctaacattgcagaagatgagaagag 99  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||||  |||| |||| || || | ||||||||||||   ||||||    
T  56034788 tcaccagaagctgaagttcatcagaagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtccaagcattgcagaagactggaagag 56034689  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||  | |||||||||||||||| |||||| |  | ||||||||| |||| ||| ||||   || |||||||| |||||||    
T  56034688 tgaagcaacgactattttgaaataatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtctaaaatgtacaactactatct 56034589  T
Q  200 c 200  Q
    |    
T  56034588 c 56034588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12811075 - 12811272
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||  ||||||| || |||||  || ||||||||||||||||||||||||  |||| | |  || |||| |||||||||||| ||| ||||    
T  12811075 tcaccagaagctctagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatggatttagtttcgtctaagcattgcagaagactga-aaga 12811173  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  |||||| |||||||||||||||||||||||    |  |||||||| |||| | | ||||||||| |||||||||||||||    
T  12811174 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttc---taatagcgttgacaaagtaaaattgtacgaagtgtacaaccactatc 12811270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 22675454 - 22675613
Alignment:
Q  38 taaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    |||||||||||||| |||||||  |||| |||| || |||| ||||||||||||  |||| |||||||||||  ||| ||  |||||| |||||||||||    
T  22675454 taaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaaaagtgaagcaacgactagtttgaaaggatttgaaggcatt 22675553  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
     ||||||||||| |  | ||||||||| |||| ||| |||||| || |||||||||||||    
T  22675554 tgatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 22675613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 10693063 - 10692869
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||| ||  |||| || | || ||||  |||||||||||   ||| ||    
T  10693063 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaag 10692966  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||| | |||| || |||||| ||| |||||||||||||    
T  10692965 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccacta 10692869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 10906829 - 10906635
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||| ||  |||| || | || ||||  |||||||||||   ||| ||    
T  10906829 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaag 10906732  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||| | |||| || |||||| ||| |||||||||||||    
T  10906731 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccacta 10906635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 13576013 - 13576207
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  | |||||||||||||  |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  13576013 tcaccagaagctgcagttcatcaggagatgcaa--cataaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 13576110  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||| ||||||||||| |  | ||||||||| | || |||  |||||||| |||| ||||||||    
T  13576111 tgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccacta 13576207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 17540598 - 17540409
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaaga-tgagaagagtgaagcaa 107  Q
    |||||||| |||||||||| ||| ||  || ||||||||  || |||||||| |||| |||| |||||| ||||||| |||| ||| |||| ||||||||    
T  17540598 agctgaagatcatcagaagttgaaagaattgaagcttca--ggctgttcaaatgatttaatctcgcctatcattgcaaaagactga-aagaatgaagcaa 17540502  T
Q  108 ctgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |  |||||||| | |||  ||||| || ||||||| | ||| |||  ||| |||||||||||||| ||||||||| |||||||||| ||||||    
T  17540501 caactaattcagatggatgtgaagccagtggatgcctattcgttggagagtgttgaaaaaggacaattgtacgaagtgtacaaccattatctc 17540409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22089801 - 22089721
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacatt 82  Q
    |||||||||||| ||| |||||||||||||| ||  |||| ||||||||||||||||||| |||| ||||||||||||||||    
T  22089801 tcaccagaagctaaagatcatcagaagatgaaagaattaa-gcttcaaaggttgttcaaaggatttaatcacgcctaacatt 22089721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 29121486 - 29121388
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||  ||| ||  |||||| ||||||||| ||||||||||||| || | ||||||||| |||| || |||||||||| |||||||||||||    
T  29121486 agtgaagcaacgactattttgaaaggatttgaaggcactggatgcttgttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 29121388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 19911781 - 19911974
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacg-cctaacattgcagaagatgagaagagtgaa 103  Q
    |||||| || |||||||||| |||||  || |||||||||| ||||||||||||| ||||| |||| || || | ||||||| ||||  |||  ||||||    
T  19911781 cagaagttgtagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatagattcaatctcgtccaagcattgcaaaagaccagagcagtgaa 19911880  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttg-acgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  |||||| ||||| ||||||||||||| ||| ||| | ||||||||| | || | | |||||| || |||||||||||||    
T  19911881 gcaacgactattttgaaaggatttgaaagcattggatgcttattctttgaaagagcgttgacatagtataattgtacaaagtgtacaaccacta 19911974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 14904253 - 14904453
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || | |||||||||||| | | |||||| |||| |||| || |||  ||||||||||||   ||| ||    
T  14904253 tcaccagaagttgtagttcatcaggagatgcaagacctaaagcttcaaaagctattcaaaggatttaatctcgtctaggcattgcagaagactggaaaag 14904352  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  | | ||  |||||| |||||| |||||||||||| ||| |||| ||||||||| | || ||| ||||||||| |  ||||||| |||||    
T  14904353 tgaagcaacgtccattttgaaaggatttgaagacattggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtaaacaaccattatct 14904452  T
Q  200 c 200  Q
    |    
T  14904453 c 14904453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23123645 - 23123587
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaa 59  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||| ||||||||    
T  23123645 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaagattgttcaa 23123587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 8105772 - 8105655
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgta 178  Q
    |||||||||||   ||| | ||||||||| |||| ||  |||||| ||||| |||||||||||||||||||   | ||||||||| |||| || ||||||    
T  8105772 attgcagaagactggaaaattgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 8105673  T
Q  179 cgaattgtacaaccacta 196  Q
    |||| |||||||||||||    
T  8105672 cgaaatgtacaaccacta 8105655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 11901322 - 11901202
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    ||||||||||||  ||||   |||||||||  ||||||||||||   ||||||||||||||||||| |||  ||  || ||||  ||||||||| |||||    
T  11901322 cattgcagaagactagaaacatgaagcaacgactaattcaaaagattttgaaggcattggatgcttattctctggagaacgttagaaaaggacaattgta 11901223  T
Q  179 cgaattgtacaaccactatct 199  Q
    |||| ||||||| ||||||||    
T  11901222 cgaagtgtacaatcactatct 11901202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 54680064 - 54679948
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| |||||||||||||||| |||||| |  | |||| |||| |||| || |||||||    
T  54680064 attgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcattgacaaagtacgtttgtac 54679965  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  54679964 gaagtgtacaaccacta 54679948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 16853591 - 16853521
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| |||||||||||||||||||  | ||||||||| |||| |||| |||| ||| |||||||||||||    
T  16853591 ttgaaagcattggatgcttgttcctcaaagagcgttgacaaagtacatctgtatgaagtgtacaaccacta 16853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 3483856 - 3483739
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    ||||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||||||||| |||| ||| |||||    
T  3483856 cattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaattgta 3483757  T
Q  179 cgaattgtacaaccacta 196  Q
    ||||  | ||||||||||    
T  3483756 cgaagcgcacaaccacta 3483739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 17787990 - 17788144
Alignment:
Q  40 aagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattgga 139  Q
    |||||||||||| |||||||| |||| |||||||| || ||||||||||||  |       |||||||   ||| |||||| | | || |||||||| ||    
T  17787990 aagcttcaaaggctgttcaaatgatttaatcacgcttatcattgcagaagacta-------gaagcaatgactatttcaaaggaatttaaaggcattaga 17788082  T
Q  140 tgcttgttccttgacgagcgtt-gaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| ||| |||  || |||| ||||||||||| ||||||||  |||||||||||||||||    
T  17788083 tgcttattctttggagaacgttggaaaaaggacaattgtacgatgtgtacaaccactatctc 17788144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 56533058 - 56533155
Alignment:
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgac-gagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||| |||| ||  |||||| ||||| ||||| |||| ||||||||  |  ||||||||| |||| || |||||||||| |||||||||||||    
T  56533058 tgaagcaacggctattttgaaaggatttgaatgcattagatgtttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 56533155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 5e-55; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 10640364 - 10640544
Alignment:
Q  17 ttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    ||||||||||| ||||||  |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||  ||||||||||||||||  ||||||    
T  10640364 ttcatcagaagctgagagaattaaagcttcaaaggttgttcaaaggatttaatcacgcctagcattgcagaagaccagaagagtgaagcaacgactaatt 10640463  T
Q  117 caaaaggaattgaaggcattggatgcttgttccttgacgagcgttg-aaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||| ||||||||||| ||||||||||| |||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  10640464 caaaaggatttgaaggcattagatgcttgttctttgaagagcgttgaaaaaaggacaattgtacgaagtgtacaaccacta 10640544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19470889 - 19470694
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||| ||||| ||||| |||||| ||||||||||   | |||||||||||||||||||| ||||| ||||||||||| ||||||| ||||  |||||| |    
T  19470889 tcacaagaagttgaagatcatcaaaagatgagagaactgaagcttcaaaggttgttcaacagatttaatcacgcctagcattgcacaagaccagaagaat 19470790  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||| |||  |||||| ||||||||||| ||||||||| | |||||||||||    
T  19470789 gaagcaacgactaattcaaaaggatttgaaggcattggatgcttgttctttgcagagcgtggaaaaaggacaattgtacgaagtttacaaccacta 19470694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 15987437 - 15987253
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    ||||||||||||||||| |||| ||||||||||| |||||||  |||| |||| || |||| ||||||||||||  |||||||||||||||   ||| ||    
T  15987437 tcatcagaagatgagagacttagagcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcaatgactattt 15987338  T
Q  117 caaaaggaatt-gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
     |||||| ||| ||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  15987337 taaaagggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 15987253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 23284779 - 23284584
Alignment:
Q  6 agaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaag 104  Q
    ||||||||||||||||||| |||||  || |||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||  |||| |||||||    
T  23284779 agaagctgaagttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagaccagaaaagtgaag 23284680  T
Q  105 caactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||  ||| ||  |||||| |||||||||||| ||||||||||||||| ||||||||| |||| ||| ||||||||| |||| ||||| ||||||    
T  23284679 caacgcctattttgaaaggatttgaaggcattgaatgcttgttccttgaagagcgttgacaaagtacaattgtacgaagtgtataaccattatctc 23284584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20112628 - 20112829
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    ||||| |||||||||||||||||  |||||  || |||||||||| ||| ||||||||||  |||| |||| |  |||| ||||||||||||   |||||    
T  20112628 tcacctgaagctgaagttcatcaagagatgcaagacttaaagcttaaaaaggttgttcaatggatttaatctcttctaagcattgcagaagaccggaaga 20112727  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
     |||||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  20112728 atgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatc 20112827  T
Q  199 tc 200  Q
    ||    
T  20112828 tc 20112829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 13435752 - 13435556
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||| ||||||||||||||||| |||||  || |||||||||||||||| | |||||  |||| |||| ||  ||| |||||||||||||  ||||||    
T  13435752 tcaccataagctgaagttcatcaggagatgcaagacttaaagcttcaaaggattttcaatggatttaatctcgtttaagcattgcagaagattggaagag 13435653  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||| |||||| ||| |||||| ||||  |||||||| |||| ||| ||||||||| |||||||||||||    
T  13435652 tgaagcaacgactattttgaaaggatttgaaagcattgaatgattgttctttgaaaagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13435556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15531553 - 15531749
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || ||||||||||||||||  || |||||||||| |||||||||||||   ||| |||| || |||| ||||||||||||  |||||||    
T  15531553 tcaccagaagttgtagttcatcagaagatgcaagacttaaagcttgaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactagaagag 15531652  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | || |||| | || ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| |||||||||  ||||||||||||    
T  15531653 taaaacaacggttattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccacta 15531749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24117049 - 24116848
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||||||| |||||||||||||||||||  || |||||||||||||| || |||||||  |||| |||| || | || ||||||| ||||  ||| ||    
T  24117049 tcaccagaagatgaagttcatcagaagatgcaagacttaaagcttcaaaaggctgttcaatggattcaatctcgtccaagcattgcaaaagaccagagga 24116950  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||| | | | || ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||    
T  24116949 gtgaagtagcggttattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatc 24116850  T
Q  199 tc 200  Q
    ||    
T  24116849 tc 24116848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 26943741 - 26943600
Alignment:
Q  55 ttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgac 154  Q
    |||||| |||| ||||| | ||| ||||||||||||  |||||||||||||||| |||| ||||| |||| | ||||||||||||||||||||| ||||     
T  26943741 ttcaaaggatttaatcatgtctagcattgcagaagactagaagagtgaagcaaccgctatttcaataggattagaaggcattggatgcttgttctttgaa 26943642  T
Q  155 gagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||   ||| ||| ||||||||| |||||||||||||    
T  26943641 gagcgttggcgaagtacaattgtacgaagtgtacaaccacta 26943600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 9718063 - 9717867
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| |||||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||| ||||||   ||||||    
T  9718063 tcactagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacattgtagaagactggaagag 9717964  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| || |||||||| ||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  9717963 tgaagcaacaactattttgaaaggatttaaaggcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 9717867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13602392 - 13602192
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| |||||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| ||||  | |||| ||||||||||||   ||||||    
T  13602392 tcacaagaagctatagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagag 13602293  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  ||| |||||||||||||||||||||| ||| |||| || |||||| |||  ||| ||||| ||| |||| |||||||||||    
T  13602292 tgaagcaaccactattttgaaatgaattgaaggcattggatgcttattctttgaagaacgttgacaaaatacaattgtaagaagtgtataaccactatct 13602193  T
Q  200 c 200  Q
    |    
T  13602192 c 13602192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15302420 - 15302220
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||| ||||| ||| |||| || |||||  || |||||||| |||||||||||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  15302420 tcaccaaaagctaaagctcattaggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactggaaaag 15302321  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||| ||  |||||| || |||||||||||||||||||| |||| ||||||||| |  | ||| |||||| || ||||||||||||||||    
T  15302320 tgaagcaacggctattttgaaaggatttaaaggcattggatgcttgttctttgaagagcgttgacattgtacaattgtacaaagtgtacaaccactatct 15302221  T
Q  200 c 200  Q
    |    
T  15302220 c 15302220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19624199 - 19623999
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacg-cctaacattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || || | ||||||| ||||  ||| |||    
T  19624199 tcaccagaagctgaagttcatcaggagatgcaagtcttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagaggag 19624100  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| |   |||||| ||||| |||||||||| |||||| |||  |||||||  |  || ||| ||||||||| ||||||||||||||||    
T  19624099 tgaagcaacgactattctgaaaggatttgaaagcattggatgattgttctttggagagcgttacactagtacaattgtacgaagtgtacaaccactatct 19624000  T
Q  200 c 200  Q
    |    
T  19623999 c 19623999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 32544485 - 32544289
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||| |||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  32544485 tcaccataagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 32544386  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| || ||||||||||||| || ||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  32544385 tgaagcaacgtctattttgaaaggatttaaaggcattggatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 32544289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 18378496 - 18378334
Alignment:
Q  39 aaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattg 137  Q
    |||||||||| ||||||||||  ||||||||| || ||||  |||||| ||||   ||||||| |||||||  ||| ||  |||||| ||||||||||||    
T  18378496 aaagcttcaacggttgttcaatggattaaatctcgtctaagtattgcaaaagactggaagagtcaagcaacaactattttgaaaggatttgaaggcattg 18378397  T
Q  138 gatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| ||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  18378396 gatgcatgttctttgaagagcgttgataaagtacaattgtacgaagtgtacaaccactatctc 18378334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 14100373 - 14100565
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||||||||||||||||| |||||  || ||||||| |||||||| |||||||  |||| |||| |  |||| ||||| ||||||   ||||||||||    
T  14100373 cagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggatgttcaatggatttaatctcatctaagcattgtagaagactggaagagtgaa 14100472  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | |||  ||| ||  |||||| ||||||||||||||||||| ||| || | ||||||||| |||| ||| || |||||| |||||||||||||    
T  14100473 gaaacaactattttgaaaggatttgaaggcattggatgcttcttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccacta 14100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 29918232 - 29918041
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    ||||||||| |||||||||| |||||  || |||||||||||||||||||||||   |||| |||| || |||| |||||||||||||  ||| ||||||    
T  29918232 cagaagctgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcatg-gatttaatctcgtctaagcattgcagaagattggaaaagtgaa 29918134  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  ||| || ||||||||||  ||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  29918133 gcaacgactagtttgaaaagatttgaaggcatcagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 29918041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 21625303 - 21625121
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    ||||||| |||||  || |||| |||||||||||||||||||  |||| |||| || |||| |||||||||||||  ||||||| ||||||| |||| ||    
T  21625303 tcatcaggagatgcaagacttacagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagattggaagagtaaagcaacggctattt 21625204  T
Q  117 caaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
     ||| | | |||||||||||| |||||||||| |  | ||||||| | |||| ||| ||||||||| |||||||||||||||||    
T  21625203 gaaa-gcatttgaaggcattgcatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactatctc 21625121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12715348 - 12715549
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||| ||||| || |||||||||| |||||  || |||||||||||||| || |||||||  |||| |||| || |||| |||||||||||||   ||||    
T  12715348 tcactagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatctcgtctaagcattgcagaagattgaaaga 12715447  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  ||| || ||||| |||||| |||| | ||| |||| ||||||||| |||| ||| ||||||||| |||| ||||||||||    
T  12715448 gtgaagcaacgactattttgaaatgatttgaaagcattgtatgcctattctttgaagagcgttgacaaagtacaattgtacgaagtgtagaaccactatc 12715547  T
Q  199 tc 200  Q
    ||    
T  12715548 tc 12715549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 19688980 - 19688790
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacg-cctaacattgcagaagatgagaagagtgaa 103  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||  |||| | || || || | ||||| |||| |   ||||||||||    
T  19688980 cagaagctgaagttcatcaggagatgcga--cttaaagcttcaaaggttgttcaatggatttattctcgtccaagcattgtagaaaactggaagagtgaa 19688883  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||   ||| ||  |||||| |||||||||||||||| |||||| |  | ||||||||| |||| ||| ||||||||| |||| ||||||||    
T  19688882 gcaaggactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 19688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 26972157 - 26972351
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  | |||||||| |||||  || |||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  26972157 tcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagacttgaagag 26972256  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| || ||||||||||||| |||||| |  | ||||||||| |||| ||| |||  |||| |||||||||||||    
T  26972257 tgaagcaacaactattttgaaaggatttaaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattg--cgaagtgtacaaccacta 26972351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 25597699 - 25597558
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| | |||  || |||||||||||||||| |||||||  |||| |||| || |||| ||||| ||||||   ||||||    
T  25597699 tcaccagaagttgtagttcatcaggacatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtctaagcattgtagaagactggaagag 25597600  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatg 141  Q
    |||||| || |||| ||| |||||| ||||||||||||||||    
T  25597599 tgaagcgacggctatttcgaaaggatttgaaggcattggatg 25597558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 19086252 - 19086178
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  19086252 ttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 19086178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 20487945 - 20488043
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||| |||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| || |||||||||| | |||||||||||    
T  20487945 agtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtttacaaccacta 20488043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 25930626 - 25930493
Alignment:
Q  67 aatcacgcctaacattgcagaag-atgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaa 165  Q
    ||||| ||||| ||||||||||| |  |||||  || |||||| ||||||||| | | | |||||| |||||||||||| |||||||| |||||||| ||    
T  25930626 aatcatgcctatcattgcagaaggaatagaagcctggagcaacggctaattcagaggaatttgaagtcattggatgcttattccttgaagagcgttggaa 25930527  T
Q  166 aaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| | | |||| ||||||||||||||||||||    
T  25930526 aaggataatagtac-aattgtacaaccactatctc 25930493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 18435776 - 18435580
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    |||| |||||||  |||||||||| |||||  || ||||||||||  |||||| |||||  |||| |||| || |||| | || || ||||  |||| ||    
T  18435776 tcactagaagctctagttcatcaggagatgcaagacttaaagctttgaaggttattcaatggatttaatctcgtctaagaatttcaaaagactagaaaag 18435677  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| |||  ||||| || |||||||||||||    
T  18435676 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacaaagtgtacaaccacta 18435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 16877398 - 16877237
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaaga-tgagaagagtgaagcaactgctaattcaaaaggaattgaaggc 133  Q
    |||||||||||||| |||||| ||  |||| || | || ||||  ||||||||||| |||||| |||||||||||  |||  | ||||||| |||||||     
T  16877398 cttaaagcttcaaaagttgtttaatggattcaaactcgtctaaagattgcagaagactgagaa-agtgaagcaacgactatcttaaaaggatttgaagga 16877300  T
Q  134 attggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  |||||  | ||||||||| |||| || |||||||||| |||||||||||||    
T  16877299 attggatgctaattcctcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 16877237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 20730671 - 20730829
Alignment:
Q  39 aaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattg 137  Q
    ||||||||||||| |||||||  |||| |||| |  ||||  |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||||    
T  20730671 aaagcttcaaaggctgttcaagggatttaatctcatctaagtattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattg 20730770  T
Q  138 gatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||| |||||| |  | ||||||||| |||| ||| |||||| || |||||||||||||    
T  20730771 gatgtttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 20730829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 15954843 - 15954727
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| | |||||||||  ||||||  |||||| |||||||||||| |||||||||  |  | ||||||||| |||| || |||||||    
T  15954843 attgcagaagactggaaaaatgaagcaacgactaatttgaaaggatttgaaggcattgaatgcttgttattcaaagagcgttgacaaagtacgtttgtac 15954744  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  15954743 gaagtgtacaaccacta 15954727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 25594155 - 25594092
Alignment:
Q  133 cattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||||||| |||| | ||||||| |||| ||| ||||||||| |||||||||||||    
T  25594155 cattggatgcttgttctttgaagcgcgttgacaaagtacaattgtacgaaatgtacaaccacta 25594092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 17927941 - 17927864
Alignment:
Q  68 atcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaagga-attgaaggcattggatgctt 144  Q
    |||||||||| ||||||||||||   ||||  ||||||||| ||||||||||||| |  |||||||||||||||||||    
T  17927941 atcacgcctatcattgcagaagaatggaagcctgaagcaacggctaattcaaaagaattttgaaggcattggatgctt 17927864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21618462 - 21618268
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||||| ||||||||||||||||  |  |||||||||||||| |||||| ||  |||| || | |  ||||  |||| ||||||   ||| ||    
T  21618462 tcaccagaagctgtagttcatcagaagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcttctaaagattgtagaagactggaaaag 21618365  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | |||||||  ||| ||   ||||| ||||||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||    
T  21618364 taaagcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 21618268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 22802232 - 22802165
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||||||||||| |  | ||||||| | |||| ||| ||||||||| |||||||||||||    
T  22802232 aaggcattggatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccacta 22802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 16265205 - 16265275
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| ||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||| |||||||||    
T  16265205 ttgaatgcattggatgcttgttcttcaaagagcgttgagaaagtacaattgtacgaagtgtgcaaccacta 16265275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 21235219 - 21235149
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||| ||||||||||| |  | ||||||||| |||| ||| ||||| ||| |||||||||||||    
T  21235219 ttgaaggcattcgatgcttgttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccacta 21235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 12423362 - 12423281
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| | |||||||||| |||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  12423362 aaaggattggaaggcattgtatgcttattcttcaaagagcgttgacatagtacctttgtacgaagtgtacaaccactatctc 12423281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 19833041 - 19833158
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgta 178  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||| |||||||||||||||||||   | ||||||||| | || || ||||||    
T  19833041 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgta 19833140  T
Q  179 cgaattgtacaaccacta 196  Q
    |||| ||||||| |||||    
T  19833141 cgaagtgtacaagcacta 19833158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 22076491 - 22076536
Alignment:
Q  155 gagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||| | || ||||||||||||| |||||||||||||||||    
T  22076491 gagcgttgacatagtacatttgtacgaagtgtacaaccactatctc 22076536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 6226 - 6026
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||||||  |||||||| |||| ||||||||||| ||||||||||||  ||||||      
T  6226 tcactagaagttgaagttcatcagaagatgagagatttaaagcttcaaagactgttcaaaggatttaatcacgcctagcattgcagaagaccagaagacc 6127  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| |||||| || ||||||||||||| |||    
T  6126 gaagcaacaactaattcaaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctc 6027  T
Q  201 t 201  Q
    |    
T  6026 t 6026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 17024826 - 17025021
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||||||| ||||||  |||||||||||| |  |||||||| |||| |||||||| |||||||||| ||||  | ||||||    
T  17024826 tcaccagaagctgaagatcatcagaagctgagagaattaaagcttcaatgtctgttcaaaggatttaatcacgcataacattgcaaaagaccataagagt 17024925  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||| || | ||||||||||||| |||| ||||||||| |||||||||||||    
T  17024926 gaagcaacgactaattcaaaaggatttgaaggcattggatgcttgttctttaaagagcgttgaaaaatgacaattgtacgaagtgtacaaccacta 17025021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 12613700 - 12613871
Alignment:
Q  24 gaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaagg 123  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||| |||||||||||| |    
T  12613700 gaagatgagagatttaaagcttcaaaggttgttcaaaagatttaatcacgcctagcattgcagaagaccagaagagtgaagcaacggctaattcaaaa-g 12613798  T
Q  124 aattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | ||||| ||||||| ||||||||| |||| ||||||||  |||| ||| ||||||||| |||||||||||||    
T  12613799 atttgaaagcattggttgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccacta 12613871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 21191763 - 21191922
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    ||||||||||||||||||||||||  ||| |||||| || ||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||    
T  21191763 ttaaagcttcaaaggttgttcaaagtatttaatcacacccaacattgcagaagaccagaagagtgaagcaacagctaattcaaaaggatttgaaggcatt 21191862  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||| |||| ||||||||  |||| ||| ||||||||| |||||||||||||    
T  21191863 ggatgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccacta 21191922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33256212 - 33256412
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||| ||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  33256212 tcaccagaagctaaagttcaacaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 33256311  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| || ||||||| ||||||||||||||||||||||| |||| | ||||||| |||| ||| ||||||||| ||||||||||||||||    
T  33256312 tgaagcaacgactattttaaaaggatttgaaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatct 33256411  T
Q  200 c 200  Q
    |    
T  33256412 c 33256412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33276384 - 33276584
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||| ||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  33276384 tcaccagaagctaaagttcaccaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 33276483  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| || ||||||| ||||||||||||||||||||||| |||| | ||||||| |||| ||| ||||||||| ||||||||||||||||    
T  33276484 tgaagcaacgactattttaaaaggatttgaaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatct 33276583  T
Q  200 c 200  Q
    |    
T  33276584 c 33276584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22154076 - 22153880
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || |||||||||||||||| |||||||  |||| |||| || |||| ||||||||||||  |||| ||    
T  22154076 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaatag 22153977  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||||||  |||||| ||||| |||||||||| |||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  22153976 tgaagcaacaactaatttgaaaggatttgaaagcattggatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 22153880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 28492269 - 28492465
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||| || |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||  || |||| ||||||||||||  |||||||||||    
T  28492269 cagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagcattgcagaagactagaagagtgaa 28492368  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||| ||  |||||| ||||||||||||||||||||||| ||||  |||||||| |||| ||| ||||||||| |||||||||||||||||    
T  28492369 gcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 28492465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12284642 - 12284442
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||||||||||||||||||||  || |||| |||||||||||||||||||  |||| |||| || | || ||||||| ||||  ||| |||    
T  12284642 tcaccagaagctgaagttcatcagaagatgcaagacttagagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagaggag 12284543  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||| ||||||||    
T  12284542 tgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacactatct 12284443  T
Q  200 c 200  Q
    |    
T  12284442 c 12284442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 10757634 - 10757441
Alignment:
Q  8 aagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagc 105  Q
    ||||||||||||||||| |||||  || |||||||||||||| ||||||||||  |||| |||| || |||| |||||||||| || |||||||||||||    
T  10757634 aagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaagcattgcagaaaatcagaagagtgaagc 10757535  T
Q  106 aactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||  ||| ||  |||||| ||||| |||||||||| |||||| |||| |||| |||| |||| ||| ||||||||| ||||||||||||||||    
T  10757534 aacaactattttgaaaggatttgaaagcattggatgattgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactatct 10757441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 48704423 - 48704230
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||  |||| |||| ||  ||| || |||||||||   ||||||    
T  48704423 tcaccagaagctaaagttcatcagaagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaagcaatgcagaagactggaagag 48704324  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacca 193  Q
    |||| ||||  ||| ||  |||||| ||||||||| ||||||||||||| |||| || |||||| |||| ||| ||||||||| ||||||||||    
T  48704323 tgaaacaacaactattttgaaaggatttgaaggcactggatgcttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaacca 48704230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20954334 - 20954534
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  20954334 tcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagacaggaagag 20954433  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||  || | ||  |||||| ||||| |||||||| |||| ||| |||| ||||||||| |||| ||| |||||| || ||||||||||||||||    
T  20954434 tgaagcaatggccattttgaaaggatttgaaagcattggaggcttattctttgaagagcgttgacaaagtacaattgtaccaagtgtacaaccactatct 20954533  T
Q  200 c 200  Q
    |    
T  20954534 c 20954534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 1578086 - 1577886
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||| ||||| ||||| |||||  || |||| ||||||||||||||||||| ||||| |||| || |||| ||||||||||||   ||||||    
T  1578086 tcacaagaagctaaagtttatcaggagatgcaagacttagagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaagag 1577987  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||| | ||||| ||||||||||||||||| || | ||||||||| |||| | | |||||| || ||||||||||||||||    
T  1577986 tgaagcaacgactattttgaaagaatttgaaagcattggatgcttgttcttttaagagcgttgacaaagtataattgtactaagtgtacaaccactatct 1577887  T
Q  200 c 200  Q
    |    
T  1577886 c 1577886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19717743 - 19717547
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||||  | |||||  || ||||||||||||||||||||||||  |||| |||| || | || ||||||||| ||   ||||||    
T  19717743 tcaccagaagctaaagttcatatggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtcgaagcattgcagaggactggaagag 19717644  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| |||||||||| |||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||| ||||    
T  19717643 tgaagcaacgactattttgaaaggatttgaaggcatcggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaacta 19717547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22600043 - 22600243
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || |||||||||||||||| |||||||  |||| ||||  | |||| ||||||||||||   ||||||    
T  22600043 tcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatcttgtctaagcattgcagaagactggaagag 22600142  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    | || ||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  22600143 taaaacaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 22600242  T
Q  200 c 200  Q
    |    
T  22600243 c 22600243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 32785799 - 32785998
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||| || |||||||||  |||||  || |||||||||||||||||||||||   |||| |||| || |||| ||||||||||||   ||| ||    
T  32785799 tcactagaagttgtagttcatcatgagatgcaagacttaaagcttcaaaggttgttcatg-gatttaatctcgtctaagcattgcagaagactggaaaag 32785897  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  32785898 tgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 32785997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 18896468 - 18896654
Alignment:
Q  11 ctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagat-taaatcacgcctaacattgcagaagatgagaagagtgaagcaact 109  Q
    |||||| || ||||||| ||| ||| || ||| |||||| | |||| ||| ||| | ||||||||||| ||||||||||||  |||||   ||||||||     
T  18896468 ctgaagatcttcagaagctgaaaggattgaagtttcaaaagatgtttaaatgatgttaatcacgcctatcattgcagaagactagaagcaagaagcaacg 18896567  T
Q  110 gctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||| | |||||||||||||||||||  || |||  || ||||| ||||||||| ||||||||| |||||||||||||    
T  18896568 gctaattcaaaagaatttgaaggcattggatgcttagtctttggagaacgttggaaaaggacagttgtacgaagtgtacaaccacta 18896654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21029012 - 21028812
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||  |||| |||| ||||||| |||||||||||| | |||||||||   ||| |||| |  | || ||||||||||||  | |||||    
T  21029012 tcaccagaagctgaatatcattagaatatgagagacttaaagcttcatatgttgttcaatgaatttaatctcatccaagcattgcagaagaccataagag 21028913  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  |||||||||| | | |||||||||||||||||||| |  |||| ||||| ||| |||| ||| ||||| ||| |||||| |||||||||    
T  21028912 tgaagcaacgactaattcaaatgaagttgaaggcattggatgcttgctttttgaagagcgctgacaaagtacaattgtatgaagtgtacagccactatct 21028813  T
Q  200 c 200  Q
    |    
T  21028812 c 21028812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 26701990 - 26702186
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcct-aacattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||  |  |||| |||| ||  | | ||||||||||||  || ||||    
T  26701990 tcaccagaagctaaagttcatcagaagatgggagacttaaagcttcaaaggctgttatatggattcaatctcgtttgagcattgcagaagaccaggagag 26702089  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||   ||||||||| | | ||||||||||||||| |||| |  |||| ||| | ||| |||| ||| ||||||||| |||||||||||||    
T  26702090 tgaagcaacaattaattcaaatgaagttgaaggcattggattcttgctttttgaagagtgatgacaaagtacaattgtacgaagtgtacaaccacta 26702186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 38282785 - 38282586
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||| |||||  |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||| ||||||||   ||||||    
T  38282785 tcaccaaaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcatcgcagaagactggaagag 38282686  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| | || ||  |||||| || ||||||||| |||||||||| |  | ||||||||| |||| ||| ||||||||| | ||||||||||||||    
T  38282685 tgaagcaacgggtattttgaaaggatttaaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt-tacaaccactatct 38282587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 1900550 - 1900368
Alignment:
Q  15 agttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgcta 113  Q
    |||||||||| |||||  || |||||||||||||||||| |||||  |||| |||| || |||| ||||||||||||   |||||||||||||||  |||    
T  1900550 agttcatcaggagatgcaagacttaaagcttcaaaggttattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgacta 1900451  T
Q  114 attcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
     ||  |||||| || ||||||||| |||||||||| |  | ||||||||| |||| ||| ||||| ||| |||||||||||||    
T  1900450 ttttgaaaggatttaaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacagttgtaagaagtgtacaaccacta 1900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 22427220 - 22427414
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  |  | |||||||||||||  ||||||| ||||| |||| || |||| ||||||||||||   ||| ||    
T  22427220 tcaccagaagctccagttcatcaggagatgcaa--cataaagcttcaaagactgttcaatagatttaatctcgtctaagcattgcagaagactggaaaag 22427317  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  |  |||||||| |||| ||| ||||||||| |||||||||||||    
T  22427318 tgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttaaaaaagcgttgacaaagtacaattgtacgaagtgtacaaccacta 22427414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 2834907 - 2834714
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||| |||||||| | |||||  |  ||||||||||| || |||||||||  |||| |||| || |||| |||||  ||||| ||| || |    
T  2834907 tcaccagaagctgcagttcatcgggagatgcaa--cttaaagcttccaaagttgttcaatggattcaatctcgtctaagcattgttgaagactgaaaa-a 2834811  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccact 195  Q
    |||||||||| |||||||  |||||| ||||||||||||||||||||||| |  | || |||||| |||| ||  ||||||||||||||||||||||    
T  2834810 gtgaagcaacggctaatttgaaaggatttgaaggcattggatgcttgttcttcaaagaacgttgacaaagtacgattgtacgaattgtacaaccact 2834714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 22201716 - 22201797
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| |||||||||||||||||||||||  ||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  22201716 aaaggatttgaaggcattggatgcttgttctatgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 22201797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 29215981 - 29215820
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    ||||||||||||||||||||| ||  |||| |||| || |||| ||||||| ||||  |||| ||||||||||| |||| ||  |||||| |||||||||    
T  29215981 cttaaagcttcaaaggttgtttaatggatttaatctcgtctaagcattgcaaaagactagaaaagtgaagcaacggctagtttgaaaggatttgaaggca 29215882  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||||| |  | ||||| | | |||| ||| ||||||||| ||||||| |||||    
T  29215881 ttggatgcttgttcttcaaagagcgataacaaagtacaattgtacgaagtgtacaatcacta 29215820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 2268747 - 2268554
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||| |||||||| || |||||  || ||||| ||||||||||||||||||  |||| |||| || |||| ||||| ||||||   ||||||    
T  2268747 tcactagaagctaaagttcattaggagatgcaagacttaaggcttcaaaggttgttcaatggatttaatctcgtctaatcattgtagaagactggaagag 2268648  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | ||||||||   | ||  ||| || |||||||||||| |||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  2268647 ttaagcaact---attttgaaatgatttgaaggcattgaatgcttgttcgtcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 2268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 196
Target Start/End: Original strand, 39200932 - 39201049
Alignment:
Q  79 cattgcagaaga-tgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgt 177  Q
    |||||||||||| ||| |||||||||||||| |||| ||  |||||| |||||| |||||||||||||||| |  | ||||||||| |||| ||| ||||    
T  39200932 cattgcagaagactga-aagagtgaagcaacggctagtttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaagtacaattgt 39201030  T
Q  178 acgaattgtacaaccacta 196  Q
    ||||| |||||||||||||    
T  39201031 acgaagtgtacaaccacta 39201049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 30893312 - 30893111
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||| ||||| ||||||||||| |||||  || ||||||| |||||| |||||||||   |||| |||| || | || ||||||| ||||| ||| ||    
T  30893312 tcaccaaaagctaaagttcatcaggagatgcaagacttaaagtttcaaaaggttgttcattggattcaatctcgtccaagcattgcaaaagatcagagga 30893213  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||||||  |||| ||  |||||| ||||| ||| | ||||||||||| ||||  |||| ||| | || ||| ||||||||| |||||||||||||||    
T  30893212 gtgaagcaaaggctattttgaaaggatttgaaagcactagatgcttgttctttgaatagcgctgacatagtacaattgtacgaagtgtacaaccactatc 30893113  T
Q  199 tc 200  Q
    ||    
T  30893112 tc 30893111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 35402011 - 35401832
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    |||||||||||||  || |||||||||||||||  |||||||  |||| |||| ||  ||| || | |||||||   ||| |||||||||||  ||| ||    
T  35402011 tcatcagaagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtttaaacaatacagaagactggaaaagtgaagcaacgactattt 35401912  T
Q  117 caaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| |||||| || |||||||||||||    
T  35401911 tgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 35401832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 22464706 - 22464866
Alignment:
Q  38 taaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcat 135  Q
    |||||||||||| ||||||||||  |||| |||| |  |||| ||||||||||||   ||| |||||||||||  ||||||  ||| || ||||||||||    
T  22464706 taaagcttcaaaaggttgttcaacggatttaatctcatctaagcattgcagaagactggaaaagtgaagcaacgactaatttgaaatgatttgaaggcat 22464805  T
Q  136 tggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||| |  | ||||||||| |||| |||  |||||||| |||||| ||||||    
T  22464806 tggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacatccacta 22464866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 2267271 - 2267112
Alignment:
Q  38 taaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    ||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||| |||||||||||  ||| ||  |||| | |||||||||||    
T  2267271 taaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacaactagtttgaaagaatttgaaggcatt 2267172  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| |||||| |  | ||||||||  ||||  || ||||| ||| |||||||||||||    
T  2267171 ggatgtttgttcttcaaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccacta 2267112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 36134391 - 36134213
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    ||||||||||||   || ||||||| ||||||||||||||||  |||| |||| |  |||| || |||||||||   ||| |||| ||||||  ||| ||    
T  36134391 tcatcagaagatacaagacttaaagtttcaaaggttgttcaatggatttaatctcatctaaacaatgcagaagactggaaaagtggagcaacaactattt 36134292  T
Q  117 caaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      |||||| |||||| |||||||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  36134291 tgaaaggatttgaag-cattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 36134213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 14263431 - 14263508
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| ||||||||||||||| |||||||||  | ||||||||  |||| || |||||||||| |||||||||||||    
T  14263431 aaaggatttgaaggcattggatacttgttcctcaaagagcgttggcaaagcacgtttgtacgaagtgtacaaccacta 14263508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 25448546 - 25448623
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| ||||||||||||||||||| ||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  25448546 aaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 25448623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 16235193 - 16235353
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcat 135  Q
    ||||| |||||||||||||||||  |||| |||| || |||| || |||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||    
T  16235193 ttaaaacttcaaaggttgttcaattgatttaatctcgtctaaacaatgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcat 16235292  T
Q  136 tggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    || ||||||||||    | ||| ||||| |||| ||| ||||||||| |||||||| ||||    
T  16235293 tgaatgcttgttctccaaagagtgttgacaaagtacaattgtacgaagtgtacaacaacta 16235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 35040305 - 35040189
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||  |||| ||| |||||||  ||| ||  |||||| ||||| |||||||||||||| || |  | ||||||||| |||| || |||||||    
T  35040305 attgcagaagactagaaaagtaaagcaacgactattttgaaaggatttgaaagcattggatgcttgatcttcaaagagcgttgacaaagtacgtttgtac 35040206  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  35040205 gaagtgtacaaccacta 35040189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 23036405 - 23036584
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    |||||||||||||  || |||||||||||||||| | |||||  |||| |||| || ||||  | |||||||||  | || |||||| ||||  ||| ||    
T  23036405 tcatcagaagatgcaagacttaaagcttcaaaggctattcaatggatttaatctcgtctaaataatgcagaagactaaaaaagtgaaacaacaactattt 23036504  T
Q  117 caaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      |||||| |||||| |||||||||||||||| |  | ||||||  | |||| ||| ||||||||| |||||||||||||    
T  23036505 tgaaaggatttgaagacattggatgcttgttcttcaaagagcgtcaacaaagaacaattgtacgaagtgtacaaccacta 23036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21703030 - 21702833
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    ||||||||||||| |||||||||| |||||  |  ||||||||||||||  |||||  || |||| || | || |||| |||||||||||   ||| |||    
T  21703030 tcaccagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaatttgtttcaaggattcaaactcgtctaagattgcagaagacttgaaaagt 21702933  T
Q  101 gaagcaactgctaattcaaaaggaattgaagg-cattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
      |||||| |||| ||  |||||| ||||||| ||||| |||||| ||| |  | ||||||||| | || || |||||||||| ||||||||||||||||    
T  21702932 atagcaacggctattttgaaagga-ttgaagggcattgaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 21702834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 46089079 - 46089008
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  46089079 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 46089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 48570221 - 48570292
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  48570221 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 48570292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10251193 - 10251106
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaaga 90  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||| ||| |||| || | || |||| |||||||||||    
T  10251193 tcaccagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaaaggattcaaactcgtctaagattgcagaaga 10251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 13880768 - 13880602
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||  |||||||||||||| ||||||||| |    
T  13880768 ttaaagcttcaaaggctgttcaaaagatttaatcacgcctagcattgcagaagactagaagagtgaagcaacgactaattcaaaaggatttgaaggcact 13880669  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaa-ttgtacaaccactatctctg 202  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||| | |||||||||||| |||||    
T  13880668 ggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtggtacaaccactacctctg 13880602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 13893949 - 13894136
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||||||||||||| |  ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||  ||||||||||||||||    
T  13893949 agctgaagatcatcagaagatgaaatacttaaagcttcaaaggttgttcaaaggatttaatcacgcctagcattgcagaagaccagaagagtgaagcaac 13894048  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
     ||||||||||||||| |||||||||||| ||| |||||| || |  ||| ||||||||||||| |||||| |  |||||||||||||    
T  13894049 ggctaattcaaaaggatttgaaggcattgaatgtttgttctttaaaaagcattgaaaaaggacaattgtacaacgtgtacaaccacta 13894136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 39284507 - 39284702
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||||||||||||||  | ||||||||||||| |||||||| |||| ||||||||||| |||||| |||||  ||||||||    
T  39284507 tcaccagaagctgaagatcatcagaagatgagagaatcaaagcttcaaaggctgttcaaaggatttaatcacgcctagcattgctgaagaccagaagagt 39284606  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||| ||||  |||||||||| | | |||||||||||||||| |||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  39284607 gaaacaacgactaattcaaatgaatttgaaggcattggatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 39284702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16316499 - 16316699
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    |||||||||| |||||||||||||  ||||  || ||||||||||||||||||||||||  |||| ||||||| |||| | ||||||||||  |||||||    
T  16316499 tcaccagaagttgaagttcatcaggggatgcaagacttaaagcttcaaaggttgttcaatggatttaatcacgtctaagaattgcagaagaccagaagag 16316598  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||| ||  |||||| |||||| |||||||||||||||| |||| ||||||||||| || ||| ||||||||| ||||||||||||||||    
T  16316599 tgaagcaacagctattttgaaaggatttgaagccattggatgcttgttctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccactatct 16316698  T
Q  200 c 200  Q
    |    
T  16316699 c 16316699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 21695617 - 21695424
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||  |||||  || |||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||  |||||||    
T  21695617 tcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagaccagaagag 21695518  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacca 193  Q
    |||||||||  ||| ||||||| || ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||    
T  21695517 tgaagcaacgactatttcaaaatgatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacca 21695424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29935301 - 29935500
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||| ||||||||||| |||||  || ||||||  |||||||||||||||| | ||| |||||| | |||||||||||||||  ||||||||    
T  29935301 tcaccagaagctaaagttcatcaggagatgcaagacttaaaatttcaaaggttgttcaatatatttaatcacacttaacattgcagaagaccagaagagt 29935400  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||  ||| ||  |||||| ||||| ||||||||||||||||| || | ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  29935401 gaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 29935500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 44467281 - 44467084
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||| ||||||||||||||||| |||||  || |||||||||||||| ||||||||||  |||| |||| || |||| ||||||||||||  ||||||    
T  44467281 tcaccaaaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactagaaga 44467182  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| ||||||||||||||||||||||| || | ||| ||||| |||| ||| ||||||||| |||||||||||||    
T  44467181 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagtacaattgtacgaagtgtacaaccacta 44467084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 19236994 - 19237181
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| | | |||||||||||||  ||||||||||||||| |||||||| |||| |||| || ||| ||||||||||||  ||||||||||||||||    
T  19236994 agctgaagattaccagaagatgagagagttaaagcttcaaaggctgttcaaaggatttaatctcgtctagcattgcagaagaccagaagagtgaagcaac 19237093  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
     |||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||  ||| || |||||| |||||||||||||    
T  19237094 ggctactttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccacta 19237181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 13303026 - 13302828
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| ||||||| || |||||  || ||||||||||||||||||||||||  |||| |||  || |||| ||||| ||||||  |||||||    
T  13303026 tcaccagaagctgtagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagcattgtagaagactagaagag 13302927  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||||||  ||| ||  |||||| ||||||||||| ||||||||||| |||| ||||||||| |||| ||| |||||| || |||||||||||||||    
T  13302926 tgaagcaacgactattttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatc 13302828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 9098205 - 9098384
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaag 104  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||| ||| |||||            |||||| | | ||||||||||    
T  9098205 cagaagctgaagatcatcagaagatgagagaattaaagcttcaaaggctgttcaaaatatttaatcat-----------cagaag-tcaaaagagtgaag 9098292  T
Q  105 caactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||| ||||||||||||||| ||||| ||||| |||| |||||| |||| |||||||||||||||||| ||||||||| |||||||||||||    
T  9098293 caacggctaattcaaaaggatttgaatgcattagatgtttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccacta 9098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 10883115 - 10883311
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  || ||||||| ||||||||||||||||  |||| |||| || |||| |||| |||||||   ||||||    
T  10883115 tcaccagaagctgtagttcatcaggagatgcaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaatcatttcagaagactggaagag 10883214  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||| ||||| |||| ||||||||| |||| ||| ||||||||| ||||||| |||||    
T  10883215 tgaagcaacgactattttgaaaggatttgaaggcattggatgcctgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcacta 10883311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13137837 - 13138037
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||  ||||||| || |||||  || ||||||||||||||||||  ||||  |||| |||| || |||| |||||||||||| ||| ||||    
T  13137837 tcaccagaagctctagttcataaggagatgcaagacttaaagcttcaaaggttaatcaatggatttaatctcgtctaagcattgcagaagactga-aaga 13137935  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  ||| || ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  13137936 gtgaagcaacaactattttgaaaagatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatc 13138035  T
Q  199 tc 200  Q
    ||    
T  13138036 tc 13138037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 13730624 - 13730817
Alignment:
Q  8 aagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagca 106  Q
    ||||| ||| ||| ||| |||||  |||||||||||||||||||||||||||  |||| |||| || |||| ||||||| ||||  | ||||||||||||    
T  13730624 aagctaaagctcaccaggagatgcaaggcttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcataagactaaaagagtgaagca 13730723  T
Q  107 actgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    || |||| ||  ||| || ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||| ||||||    
T  13730724 acggctattttgaaaagatttgaatgcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccattatctc 13730817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 11793123 - 11792923
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || |||||||||| |||||||||||||  || | |||| || |||| ||||||  ||||  | |||||    
T  11793123 tcaccagaagctgaagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcgtctaagcattgcgaaagaccataagag 11793024  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||| | ||||| ||||| ||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  11793023 tgaagcaacgactattttgaaagcatttgaaagcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 11792924  T
Q  200 c 200  Q
    |    
T  11792923 c 11792923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 22577963 - 22578159
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || |||||||||||||||| ||||||| ||||| |||| ||  ||| ||||||||||||    |||||    
T  22577963 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtttaagcattgcagaagactgtaagag 22578062  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| |||||||||||| ||| |||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  22578063 tgaagcaacaactattttgaaaggatttgaaggcattgaatgattgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 22578159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13018449 - 13018647
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||  ||||| ||||  |||||||||||||| || |||||||  |||| ||||||||| |  |||||||||||  || ||||    
T  13018449 tcaccagaagctgaagttcatatgaagacgaga--cttaaagcttcaaaaggctgttcaatggatttaatcacgcccagtattgcagaagactaggagag 13018546  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| || ||| | | |||||||||||||||||| | |  |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  13018547 tgaagcaacgactattttaaatgaagttgaaggcattggatgctggatttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 13018646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 13648941 - 13648745
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaagagtga 102  Q
    |||||||| ||| ||||||| ||||| ||| |||||||||||||| | |||||||  |||| |||| || |||| |||||||||||| ||| ||||||||    
T  13648941 cagaagctaaagctcatcaggagatgcgagacttaaagcttcaaaagatgttcaatggatttaatcgcgtctaagcattgcagaagactga-aagagtga 13648843  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| |||| ||  |||||| || ||| ||||||||||||| || |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  13648842 agcaacggctattttgaaaggatttaaagacattggatgcttgatctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 13648745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15088736 - 15088536
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||  | |||||||| |||||  || | |||||||||||||| |||||||  |||| |||| || |||| |||||||||||| ||| ||||    
T  15088736 tcaccagaagctctaattcatcaggagatgcaagacgtaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactga-aaga 15088638  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  |||||| |||||| |||||||||||||||| || | ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  15088637 gtgaagcaacgactattttgaaaggatttgaagacattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatc 15088538  T
Q  199 tc 200  Q
    ||    
T  15088537 tc 15088536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 30945304 - 30945494
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagagtgaa 103  Q
    ||||||||| |||||||||| |||||  |  ||||||||||||||||||||||||  |||| |||| || ||||  |||| |||||||  ||| ||||||    
T  30945304 cagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgtagaagattggaaaagtgaa 30945401  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  |||||| |||||||||||||||||||||||||  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  30945402 gcaacaactattttgaaaggatttgaaggcattggatgcttgttcctcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 30945494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 2913550 - 2913750
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||| ||| |||||||||| |||||  || |||||| ||||||||| |||||||   ||| |||| |  |||| || |||||||||  |||| ||    
T  2913550 tcaccagaaactgtagttcatcaggagatgcaagacttaaatcttcaaaggctgttcaatgaatttaatctcatctaaacaatgcagaagactagaaaag 2913649  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    || ||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  2913650 tggagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 2913749  T
Q  200 c 200  Q
    |    
T  2913750 c 2913750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21283315 - 21283511
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| ||||||||||||| | |||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  21283315 tcaccagaagttgaagttcatcaggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 21283414  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | |||||||  | | ||  |||||| ||||||||||||||||||||||  |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  21283415 taaagcaacgtccattttgaaaggatttgaaggcattggatgcttgttattcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 21283511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 24788357 - 24788161
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||||||||||| || |||||  || |||||||||||||||||||||||| ||||| |||  |  |||| ||||||||||||  |||||||    
T  24788357 tcaccagaagctgaagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatatcatctaagcattgcagaagactagaagag 24788258  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||   || ||  |||||| ||||||||||||| ||||||||| |  | |||  |||| |||| ||| ||||||||| |||||||||||||    
T  24788257 tgaagcaacgaatattttgaaaggatttgaaggcattgggtgcttgttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccacta 24788161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 28409255 - 28409059
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||||||  |||||  || | ||| ||||||||||||||||||  |||| |||| || |||| ||||||||||||  |||||||    
T  28409255 tcaccagaagctaaagttcatcaagagatgcaagacataaggcttcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactagaagag 28409156  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||   || ||  |||||| |||||||||||||||| |||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  28409155 tgaagcaacaattattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 28409059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 41842216 - 41842411
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   ||||  ||| || |||| || |||| ||||| || ||||    
T  41842216 tcaccagaagctgaagttcatcagaagatgagagactt-aagcttcaaaggttgttcatttgatttgatctcgtctaagcactgcataagatcaggagag 41842314  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  |||||||||| | | |||||| |||||||| ||||||  || | | ||||||| | || ||| ||||||||| |||||||||||||    
T  41842315 tgaagcaacgactaattcaaatgaagttgaagacattggatacttgttttttaaagtgcgttgacagagtacaattgtacgaagtgtacaaccacta 41842411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28622300 - 28622506
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||||||  |||| |||| || |||| |||||||||| |  |||| ||    
T  28622300 tcaccagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcagaatactagaaaag 28622397  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||||||  |||||| |||||||||||||||| |||||  |  | | ||||||| |||| ||| ||||||||  ||||||||||||| ||    
T  28622398 tgaagcaacggctaatttgaaaggatttgaaggcattggatgtttgtttttcaaagggcgttgacaaagtacaattgtacgaggtgtacaaccactacct 28622497  T
Q  200 ctgcttctc 208  Q
    || ||||||    
T  28622498 ctacttctc 28622506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 21692499 - 21692307
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    ||||||||||||||||| || |||||  || |||||||||||||| ||| |||||    || |||| |  |||| ||||||||||||  |||||||||||    
T  21692499 cagaagctgaagttcattaggagatgcaagacttaaagcttcaaaagttattcaatgattttaatctcttctaagcattgcagaagaccagaagagtgaa 21692400  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||  ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||| ||| |||||||||||||    
T  21692399 gcaacgactgttttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccacta 21692307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 193
Target Start/End: Complemental strand, 15468130 - 15467939
Alignment:
Q  3 accagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtg 101  Q
    ||||||||||  |||||||||| |||||  || |||||||||||||||| ||||||| ||||| |||| || |||  || |||||||||   ||||||||    
T  15468130 accagaagctctagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtctaggcaatgcagaagactggaagagtg 15468031  T
Q  102 aagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacca 193  Q
    || ||||  ||| || ||||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||  ||||||||||    
T  15468030 aatcaacgactattttaaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaggtgtacaacca 15467939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 30944271 - 30944461
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagagtgaa 103  Q
    ||||||||| |||||||||| |||||  |  ||||||||||||||||||||||||  |||| |||| || ||||  ||||||||||||  ||| ||||||    
T  30944271 cagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgcagaagattggaaaagtgaa 30944368  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||||||||| |||  ||| ||||||||| |||||||||||||    
T  30944369 gcaacaactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccacta 30944461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 13880283 - 13880120
Alignment:
Q  38 taaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    |||||||||||||| |||||||  || | |||| || |||| ||||||||||||   || ||||||||||||  ||| ||  |||||| |||||||||||    
T  13880283 taaagcttcaaaggctgttcaatggacttaatctcgtctaagcattgcagaagactcgacgagtgaagcaacgactattttgaaaggatttgaaggcatt 13880184  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
     ||||||| ||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  13880183 agatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 13880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 13032039 - 13032213
Alignment:
Q  24 gaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaag 122  Q
    ||||||||||  |||||||||||||| ||||||||||  |||| |||||||||||  |||||||||||  || |||||||||||||  ||| |||||| |    
T  13032039 gaagatgaga--cttaaagcttcaaatggttgttcaatggatttaatcacgcctagtattgcagaagaccaggagagtgaagcaacaactatttcaaatg 13032136  T
Q  123 gaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
     | |||||| |||| |||||| | |  |||| ||||||||| |||| | | ||||||||| ||||||||||||||||    
T  13032137 aagttgaagacattagatgctggctttttgaagagcgttgacaaagtataattgtacgaagtgtacaaccactatct 13032213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 9069778 - 9069582
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  | |||||||| |||||  |  ||||||||||||||||||||||||  |||| |||  || |||| ||||||||||||   ||||||    
T  9069778 tcaccagaagctctatttcatcaggagatgcaaaacttaaagcttcaaaggttgttcaagggatttaatatcgtctaagcattgcagaagactggaagag 9069679  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| || ||||||||| |||||||||| |  | |||| |||| |||| ||| ||||||||| |||||||||||||    
T  9069678 tgaagcaacgactattttgaaaggatttaaaggcattgtatgcttgttcttcaaggagcattgacaaagtacaattgtacgaagtgtacaaccacta 9069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23279901 - 23280100
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || |||||||||||||||| | ||||   |||| ||||  | |||| ||||| ||||||   ||| ||    
T  23279901 tcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggctattcatg-gatttaatcttgtctaagcattgtagaagactggaaaag 23279999  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    || |||||| |||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  23280000 tggagcaacggctagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 23280099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 30026026 - 30025920
Alignment:
Q  95 aagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccac 194  Q
    |||||||||||||| |||| ||  ||| |||||||||||||| ||||||||||| || | ||||||||| |||| ||| ||||||||| ||||||||||     
T  30026026 aagagtgaagcaacggctattttgaaaagaattgaaggcattcgatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccaa 30025927  T
Q  195 tatctct 201  Q
    |||||||    
T  30025926 tatctct 30025920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 2500219 - 2500054
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    |||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||   |||||||||||||||  ||| ||  |||||| ||||| |||    
T  2500219 cttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaagca 2500120  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||| | | |||| ||| ||||| |||| ||| |||||| || |||||||||||| ||||    
T  2500119 ttggatgcttatcctttgaagagagttgacaaagtacaattgtacaaagtgtacaaccactttctc 2500054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 12366690 - 12366886
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| || ||  |  ||||||||||||| || |||||||  |||| |||| ||  ||| ||||||||||||   | ||||    
T  12366690 tcaccagaagctgaagttcatcaggaggtgcaaaacttaaagcttcaagggctgttcaatggatttaatctcgtttaagcattgcagaagactgggagag 12366789  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||| ||||||||||  ||||| |||| ||||||||| | || ||| ||||||||| | |||||||||||    
T  12366790 tgaagcaacaactattttgaaaggatttgaaagcattggatgtctgttctttgaagagcgttgacatagtacaattgtacgaagtatacaaccacta 12366886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 16309968 - 16310048
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  16309968 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 16310048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 9709746 - 9709940
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  | |||||||||||||  |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  9709746 tcaccagaagctgcagttcatcaggagatgcaa--cataaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 9709843  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||| ||||||||||| |  | ||||||||| | || |||  |||||||| |||| ||||||||    
T  9709844 tgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccacta 9709940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 5000784 - 5000964
Alignment:
Q  22 cagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaagagtgaagcaactgctaattcaa 119  Q
    |||||||||  || |||| |||||||||||||||||||  |||| |||| |||| || ||||||| ||||   |||  |||||||||||  ||| ||  |    
T  5000784 cagaagatgcaagacttagagcttcaaaggttgttcaatggattcaatctcgcccaagcattgcaaaagaccaagagaagtgaagcaacgactattttga 5000883  T
Q  120 aaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| ||||| |||||| |||||||||| |||| || |||||| | || ||| ||||||||| |||||||||||||||||    
T  5000884 aaggatttgaaagcattgaatgcttgttctttgaagaacgttgacatagtacaattgtacgaagtgtacaaccactatctc 5000964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13692558 - 13692450
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||| |||||||||||||  || ||||||||||||||||||||||||  |||| |||| ||  ||| ||||||||||||   ||||||    
T  13692558 tcaccagaagctaaagctcatcagaagatgtaagacttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagag 13692459  T
Q  100 tgaagcaac 108  Q
    |||||||||    
T  13692458 tgaagcaac 13692450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 16111950 - 16112026
Alignment:
Q  124 aattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  16111950 aattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 16112026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 33691654 - 33691850
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || | |||||||||||||| |||| ||  |||| |||| || |||| ||||||||||||   ||||||    
T  33691654 tcaccagaagctctagttcatcaggagatgcaagacataaagcttcaaaggctgttaaatggatttaatctcgtctaagcattgcagaagactggaagag 33691753  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||| | || ||||| || ||||||||||| |  | ||||||||| |||| ||| ||||||||| |||| ||||||||    
T  33691754 tgaagcaacgactattttgaaagaatttaaaggcgttagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 33691850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 4821564 - 4821494
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||||||||||||| |  | |||||||||||||| || |||||||||| |||||||||||||    
T  4821564 ttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccacta 4821494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 48236846 - 48237040
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||||||  |||| |||| || |||| ||||||| |||| ||| |||     
T  48236846 tcaccagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcataagactgaaaag- 48236942  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  | | ||  |||||| ||||||||||  ||||||| ||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  48236943 gtgaagcaacgacaagtttgaaaggatttgaaggcatcagatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 48237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 11319621 - 11319421
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    |||||||||| || || ||||||  |||||  || ||| |||||||||||| |||||||  |||| ||||  | |||| |||||||||||| ||| ||||    
T  11319621 tcaccagaagttgtaggtcatcaagagatgcaagacttcaagcttcaaaggatgttcaatggatttaatcttgtctaagcattgcagaagactga-aaga 11319523  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||| |||  ||| ||  |||||| ||||| ||||||||||| ||||  |||| ||||||||| |||  ||| ||| ||||| |||||||||||||||    
T  11319522 gtgaagtaacaactattttgaaaggatttgaatgcattggatgcgtgttttttgaagagcgttgacaaattacaattgcacgaagtgtacaaccactatc 11319423  T
Q  199 tc 200  Q
    ||    
T  11319422 tc 11319421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 4494718 - 4494634
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaa 88  Q
    |||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||    
T  4494718 cagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaa 4494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 14426683 - 14426567
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| || |||||||    
T  14426683 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtac 14426584  T
Q  180 gaattgtacaaccacta 196  Q
     || |||||||||||||    
T  14426583 taagtgtacaaccacta 14426567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 35952728 - 35952826
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||  ||| ||  |||||| |||||||||||||||| |||||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  35952728 agtgaagcaacgactattttgaaaggatttgaaggcattggatgtttgttcatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 35952826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 12174362 - 12174479
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgta 178  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||| |||||||||||||||||||   | ||||||||| |||| || ||||||    
T  12174362 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 12174461  T
Q  179 cgaattgtacaaccacta 196  Q
    |||| |||||||||||||    
T  12174462 cgaagtgtacaaccacta 12174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 33605782 - 33605705
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||  ||||||||| |||||||||||||    
T  33605782 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccacta 33605705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 14193236 - 14193129
Alignment:
Q  94 gaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacca 193  Q
    |||||||||||||||  ||| ||  |||||| |||||||||||| |||||||||| |  | ||||||| | |||| |||  |||||||| ||||||||||    
T  14193236 gaagagtgaagcaacgactattttgaaaggatttgaaggcattgaatgcttgttcttcaaagagcgttaacaaagtacaagtgtacgaagtgtacaacca 14193137  T
Q  194 ctatctct 201  Q
    ||| ||||    
T  14193136 ctacctct 14193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 331860 - 331665
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacg-cctaacattgcagaagatgagaagag 99  Q
    ||||||||||||||||| |||||| ||||| | | |||||||||||||||||||||  |  |||| ||   || || | ||||||||||||   ||||||    
T  331860 tcaccagaagctgaagtccatcaggagatgcg-gacttaaagcttcaaaggttgttttatggattcaaggtcgtccaagcattgcagaagactggaagag 331762  T
Q  100 tgaagcaactgcta-attcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||| ||||  ||  ||||||  |||||||||||||||||| || | | |  |||||||| |||| |||  |||||||| |||||||||||||    
T  331761 tgaagcaacagctatttttgaaaggatctgaaggcattggatgcttattgc-tcaaaagcgttgacaaagtacaaatgtacgaagtgtacaaccacta 331665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 13260684 - 13260757
Alignment:
Q  127 tgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||| ||||||||||||||||| | || |||| |||| | || ||| ||||||||| |||||||||||||||||    
T  13260684 tgaaagcattggatgcttgttcttggaagagcattgagatagtacaattgtacgaagtgtacaaccactatctc 13260757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 1293117 - 1293046
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  1293117 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 1293046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14425651 - 14425564
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaaga 90  Q
    ||||||||||||  |||||||||| |||||  |  |||||||||||||| ||||||  || |||| || | |||||||||||||||||||    
T  14425651 tcaccagaagctanagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttcaaggattcaaactcgcctaacattgcagaaga 14425564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 16412078 - 16412008
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |||| |||||||  ||||||||| | |||| ||||||||||||| ||||||    
T  16412078 aaggcattggatgcttattctttgaagagcgttcgaaaaggacaatagtac-aattgtacaaccattatctc 16412008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 19711074 - 19711152
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactat 197  Q
    |||||| ||||||||||||||||||| | | |  | |||| |||| |||| || |||||||||| ||||||||||||||    
T  19711074 aaaggatttgaaggcattggatgcttatccttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactat 19711152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 10176 - 9980
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagag 99  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| || |||||||  |||| ||||||||||| ||||||||||||  | |||||    
T  10176 tcaccagaagctgaagttcatcagaagataagagacttaaagcttcaaatggctgttcaatggatttaatcacgcctagcattgcagaagaccataagag 10077  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||| ||||||||||| | | ||||||||||| ||||||||||| |||| ||||||||| |||| ||| |||||| || |||||||||||||    
T  10076 tgaagcaacggctaattcaaatgaatttgaaggcattcgatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 9980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 33083069 - 33082873
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||| |||||||    
T  33083069 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagatcagaagag 33082970  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  33082969 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 33082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 43645090 - 43644912
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattc 117  Q
    ||||| |||||||||||  | |||||||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||||||| ||| ||||||||    
T  43645090 tcatcggaagatgagagaatcaaagcttcaaaggttgttcaaatgatttaatcacgcctagcattgcagaagaccagaagagtgaagaaacggctaattc 43644991  T
Q  118 aaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||| | | ||||||||||||||||||||||| |||| ||||||| | |||| ||| ||||||||| |||||||||||||    
T  43644990 aaatgaatttgaaggcattggatgcttgttctttgaagagcgttaataaagtacaattgtacgaagtgtacaaccacta 43644912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 19707714 - 19707522
Alignment:
Q  4 ccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaa 103  Q
    ||||||||||||| |||||||||||||| ||  ||||||||||||||| |||||||| || | |||||  |||||||||||||||||  |||||||||||    
T  19707714 ccagaagctgaagatcatcagaagatgaaagaattaaagcttcaaaggctgttcaaaggacttaatcattcctaacattgcagaagaccagaagagtgaa 19707615  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| ||||||||||| | | |||||||||||| ||| |||||| |||| || |||||| |||| ||| ||||||||| |||||||||||||    
T  19707614 gcaacggctaattcaaatgaatttgaaggcattgaatggttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccacta 19707522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 17701957 - 17701761
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||| |||| || |||| ||||||||||||| |||||||    
T  17701957 tcaccagaagctgaagttcatcagaagatgagagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagatcagaagag 17701858  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||  |||||| | ||||||||  |||| | | ||||||||| | |||||||||||    
T  17701857 tgaagcaacaactattttgaaaggatttgaaggcattggatgctaattcctttaagagcgttggcaaagtataattgtacgaagtttacaaccacta 17701761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18321098 - 18321298
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| |||||||  |||  | |||||    
T  18321098 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcatgagaccaaaagag 18321197  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||| ||  |||||| |||| |||||||||||||||||| |||| | ||||||| |||| ||| ||||||||| |||||||||| |||||    
T  18321198 tgaagcaacagctattttcaaaggatttgagggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccattatct 18321297  T
Q  200 c 200  Q
    |    
T  18321298 c 18321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19156408 - 19156208
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||  |||||  ||  ||||||||||||||| |||||||  |||| |||| || |||  ||||||||||||  |||||||    
T  19156408 tcaccagaagttgtagttcatcaagagatgcaagaattaaagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagactagaagag 19156309  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||||||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  19156308 tgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatct 19156209  T
Q  200 c 200  Q
    |    
T  19156208 c 19156208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 39693747 - 39693547
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || || ||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  39693747 tcaccagaagttgtagctcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagcattgcagaagactggaagag 39693648  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||   ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  39693647 tgaagcaatgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 39693548  T
Q  200 c 200  Q
    |    
T  39693547 c 39693547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 19956289 - 19956476
Alignment:
Q  11 ctgaagttcatcagaagatgagaggc-ttaaagcttcaaaggttgttcaaaag-attaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||| |||||||||| ||||| |  |||||||||||||   |||||||||| ||| || | ||||||  |||| ||||||| ||||||||||||||||    
T  19956289 ctgaagatcatcagaagctgagaagaattaaagcttcaaatactgttcaaaaggatttaacctcgcctagtattgtagaagatcagaagagtgaagcaac 19956388  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      ||||||| |||||| ||||||||||||||| ||| ||| |||| |||||||||||||||||| |||||| ||||||||||||||||    
T  19956389 gactaattctaaaggatttgaaggcattggatactttttcattgaagagcgttgaaaaaggacaattgtactaattgtacaaccacta 19956476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16681242 - 16681443
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||| ||||||||||| |||||  || |||| ||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  16681242 tcactagaagctaaagttcatcaggagatgcaagacttagagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 16681341  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||| ||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  16681342 tgaagcaacgtctagtttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 16681441  T
Q  200 ct 201  Q
    ||    
T  16681442 ct 16681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16207518 - 16207318
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || |||||||||||||| | |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  16207518 tcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaacgctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 16207419  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    | |||||||| ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  16207418 taaagcaactactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 16207319  T
Q  200 c 200  Q
    |    
T  16207318 c 16207318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12757702 - 12757902
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||| ||||  |||||||||| |||||  || |||||| ||| ||||| |||||||  |||| |||| || |||| |||||||||||| ||| ||||    
T  12757702 tcaccagtagctctagttcatcaggagatgcaagacttaaaactttaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactga-aaga 12757800  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  12757801 gtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatc 12757900  T
Q  199 tc 200  Q
    ||    
T  12757901 tc 12757902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 22461588 - 22461777
Alignment:
Q  11 ctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactg 110  Q
    |||||| |||||||||| |||  |  || |||||||||||||||||| || |||| ||||  || || ||||||||||||  |||||| |||||||||      
T  22461588 ctgaagatcatcagaagctgaacgaatttaagcttcaaaggttgttcgaaggatttaatctagcatatcattgcagaagactagaagaatgaagcaacga 22461687  T
Q  111 ctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||| ||| ||||||||||||||||||| ||| |||  ||| |||||||||||||| ||||||| | || ||||||||||||||    
T  22461688 ctaattcaaatggatttgaaggcattggatgcttattcgttggagagagttgaaaaaggacaattgtacggagtgcacaaccactatctc 22461777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 602659 - 602859
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||| ||||||||||| | |||  || |||||| ||||||||||||||||   |||| |||| || |||| ||||||||||||   ||||||    
T  602659 tcacaagaagctaaagttcatcaggaaatgcaagacttaaaacttcaaaggttgttcattggattcaatctcgtctaagcattgcagaagacttgaagag 602758  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||   ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  602759 tgaagcaatgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 602858  T
Q  200 c 200  Q
    |    
T  602859 c 602859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16189196 - 16188996
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||| ||||||||| || |||||  || ||||||||||||||||||||| ||  |||| |||| || | ||| |||||||||||   ||||||    
T  16189196 tcaccagaagccgaagttcattaggagatgcaagacttaaagcttcaaaggttgtttaatggatttaatctcgtccaaccattgcagaagactggaagag 16189097  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  ||| || ||||||||||||||||||| ||| |  | ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  16189096 tgaagcaacgactattttgaaatgatttgaaggcattggatgcttattcttctaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 16188997  T
Q  200 c 200  Q
    |    
T  16188996 c 16188996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 18722597 - 18722785
Alignment:
Q  13 gaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgca-gaagatgagaagagtgaagcaactgc 111  Q
    |||| |||||||||||||| ||  |||| |||||||||  |||||||| |||| ||||||| ||| ||||||| |||||  ||||||||||||||||  |    
T  18722597 gaagatcatcagaagatgaaagagttaatgcttcaaagactgttcaaaggatttaatcacggctagcattgcaagaagacaagaagagtgaagcaacgac 18722696  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    || ||  |||| | ||||||||||| ||||||| ||  |||| |||||||||||||  ||| ||||||||| |||||||||||||||||    
T  18722697 tattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctc 18722785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 18730942 - 18731130
Alignment:
Q  13 gaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgca-gaagatgagaagagtgaagcaactgc 111  Q
    |||| |||||||||||||| ||  |||| |||||||||  |||||||| |||| ||||||| ||| ||||||| |||||  ||||||||||||||||  |    
T  18730942 gaagatcatcagaagatgaaagagttaatgcttcaaagactgttcaaaggatttaatcacggctagcattgcaagaagacaagaagagtgaagcaacgac 18731041  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    || ||  |||| | ||||||||||| ||||||| ||  |||| |||||||||||||  ||| ||||||||| |||||||||||||||||    
T  18731042 tattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctc 18731130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24646550 - 24646350
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||  |||||  ||  |||||||||||||||||||||||  |||| |||| || |||| ||||||| ||||  | |||||    
T  24646550 tcaccagaagctctagttcatcaagagatgcaagagttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcataagactaaaagag 24646451  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    || |||||| |||| ||  |||||| ||| ||||||||||||||| ||| |||| ||| ||||| |||| ||| ||||||||| ||||||||||||||||    
T  24646450 tgtagcaacagctattttgaaaggatttgcaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatct 24646351  T
Q  200 c 200  Q
    |    
T  24646350 c 24646350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23185167 - 23185361
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  | ||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  23185167 tcaccagaagctgcagttcatcaggagatgcaa--cataaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaag 23185264  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  23185265 tgaagcaacgactagtttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 23185361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 17267685 - 17267486
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||  |||||  || ||||||||||||||||||||||||  | || |||| || | || ||||||| ||||    | |||    
T  17267685 tcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggttgttcaatgg-ttcaatctcgtccaagcattgcaaaagaccgcaggag 17267587  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||| ||  |||||| ||||| ||||| ||||||||||| |||| |||| |||| | || ||| ||||||||||||||||||||||||||    
T  17267586 tgaagcaacagctattttgaaaggatttgaaagcattagatgcttgttctttgaagagcattgacatagtacaattgtacgaattgtacaaccactatct 17267487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 17914635 - 17914471
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcat 135  Q
    ||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||    ||||||||||||||  ||| ||  |||||| ||||||||||    
T  17914635 ttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactgtaagagtgaagcaacaactattttgaaaggatttgaaggcat 17914536  T
Q  136 tggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    | ||||||||||| |||| ||||||||| |||| ||| ||||||||| |||| ||||||||||||    
T  17914535 tagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctc 17914471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 18121048 - 18121196
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || ||||||| |||||||| |||||||  |||| |||| || |||| ||||||||||||  |||||||    
T  18121048 tcaccagaagctctagttcatcaggagatgcaagacttaaagtttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaagag 18121147  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttc 148  Q
    |||||||||||||| ||  |||||| || ||||||||||||||||||||    
T  18121148 tgaagcaactgctattttgaaaggatttaaaggcattggatgcttgttc 18121196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20382333 - 20382533
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacg-cctaacattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || |||||||||||||||| |||||||  |||| |||| || ||   ||||||| ||||  ||| |||    
T  20382333 tcaccagaagctgaagttcatcaggagatgcaagtcttaaagcttcaaaggctgttcaatggattcaatctcgtccatgcattgcaaaagactagaggag 20382432  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||| |   |||||| ||||| | | |||||| |||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  20382433 tgaagcaacggctattctgaaaggatttgaaagtagtggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 20382532  T
Q  200 c 200  Q
    |    
T  20382533 c 20382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19943449 - 19943251
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||| ||||||||||||||||||| |||||  || |||||||||||||| || | |||||  |||| |||| || |||| ||||||||||||   |||||    
T  19943449 tcactagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggctattcaatggatttaatctcgtctaagcattgcagaagactggaaga 19943350  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcc-ttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| |||||||||||||||||||||||| || |  |||||||| |||| | | ||||||||| |||||||||||||    
T  19943349 gtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcctttaaaaagcgttgacaaagtaaaattgtacgaagtgtacaaccacta 19943251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 17797632 - 17797438
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||||| || ||||||| |||||  |  |||||||| ||||| |||||||||  |||| |||| || ||||| ||| |||||||   ||| ||    
T  17797632 tcaccagaagctgcagctcatcaggagatgcaa--cttaaagcctcaaaagttgttcaatggattcaatctcgtctaaccattacagaagactggaaaag 17797535  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||| ||||| |||| ||  |||||||||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  17797534 tgatgcaacggctagtttgaaaggaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 17797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 23263554 - 23263747
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaa-agcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    |||||||||||||||||||| |||||  |  ||||| | ||||||||||||||||| ||||| |||| || |||| || |||||||||  ||||||||||    
T  23263554 cagaagctgaagttcatcaggagatgcaaaacttaagaacttcaaaggttgttcaatagatttaatctcgtctaaacaatgcagaagactagaagagtga 23263653  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | |||   ||| ||  |||||| |||||||||||||||| |||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  23263654 aacaatgactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacagttgtacgaagtgtacaaccacta 23263747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 17525667 - 17525867
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    ||||||||| ||| |||||||||| |||||  || |||||| ||||||| ||||||||||  |||| |||  || |||| || |||||||||   |||||    
T  17525667 tcaccagaaactgtagttcatcaggagatgcaagacttaaatcttcaaaaggttgttcaatggatttaatatcgtctaagcactgcagaagactggaaga 17525766  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||| ||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| |||||| || |||||||||||||||    
T  17525767 gtgaaacaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatc 17525866  T
Q  199 t 199  Q
    |    
T  17525867 t 17525867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 18685348 - 18685536
Alignment:
Q  13 gaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgca-gaagatgagaagagtgaagcaactgc 111  Q
    |||| |||||||||||| | ||  |||| |||||||||  |||||||| |||  ||||||| ||| ||||||| |||||  ||||||||||||||||  |    
T  18685348 gaagatcatcagaagataaaagagttaatgcttcaaagactgttcaaaggatataatcacgtctagcattgcaagaagaccagaagagtgaagcaacaac 18685447  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    || ||  |||| | ||||||||||| ||||||| ||  |||| |||||||||||||  ||| ||||||||| |||||||||||||||||    
T  18685448 tattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctc 18685536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 18680011 - 18679826
Alignment:
Q  17 ttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaat 115  Q
    ||||||||||||||  || |||| |||||||||||| |||||   |||| |||| || |||| ||||||| ||||  ||| |||| |||||||  ||| |    
T  18680011 ttcatcagaagatgcaagacttagagcttcaaaggtagttcagtggattcaatctcgtctaagcattgcaaaagaccagaggagtaaagcaacgactatt 18679912  T
Q  116 tcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctct 201  Q
    |  | |||| ||||| ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||||    
T  18679911 ttgataggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctct 18679826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17441747 - 17441946
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  || |||||||||| |||||||||||||  || | |||| |  |||| ||||||||||||   |||||     
T  17441747 tcaccagaagctctagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcctctaagcattgcagaagactggaagac 17441846  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    | |||||||  ||| ||  |||||| |||||| |||||||||||| ||| |||| ||||||||| |||| ||| |||||| || ||||||||||||||||    
T  17441847 taaagcaacgactattttgaaaggatttgaag-cattggatgcttattctttgaagagcgttgacaaagtacaattgtactaagtgtacaaccactatct 17441945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 18719213 - 18719013
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| |||||| ||||||||||  || |||| ||||||||||| ||||||   |||| |||| ||   || ||||||| ||||  ||| |||    
T  18719213 tcaccagaagcttaagttcttcagaagatgcaagacttagagcttcaaaggctgttcagtggattcaatctcgttcaagcattgcaaaagaccagaggag 18719114  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  | |||| ||||| ||||||||||||||||| |||| ||||||||  | || ||| ||||||||| ||||||||||||||||    
T  18719113 tgaagcaacgactattttgataggatttgaaagcattggatgcttgttctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccactatct 18719014  T
Q  200 c 200  Q
    |    
T  18719013 c 18719013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21933095 - 21932899
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||  | |||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||| |||| ||| ||||    
T  21933095 tcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcataagactga-aaga 21932997  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| |||| |||| ||  |||||| || ||||||||| |||||||||  |  | ||||||||| |||| | | ||||||||| |||||||||||||    
T  21932996 gtgaaacaacggctattttgaaaggatttaaaggcattgtatgcttgtttttcaaagagcgttgacaaagtaaaattgtacgaagtgtacaaccacta 21932899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 30421369 - 30421564
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| ||||||||||||||||  |  | |||||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  30421369 tcaccagaagctgcagttcatcagaagatgcaa--cataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaag 30421466  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcctt--gacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  || ||| ||||||||||||||||||||||| ||   | ||||||||| |||| ||| ||||||||| | |||||||||||    
T  30421467 tgaagcaacgactagtttgaatggatttgaaggcattggatgcttgttcttttcaaagagcgttgacaaagtaca-ttgtacgaagtttacaaccacta 30421564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15336029 - 15336223
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaaga-tgagaaga 98  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||| ||  || | || | || ||||  ||||||||||| |||||| |    
T  15336029 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagattgcagaagactgagaa-a 15336125  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  15336126 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 15336223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15425094 - 15425288
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaaga-tgagaaga 98  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||| ||  || | || | || ||||  ||||||||||| |||||| |    
T  15425094 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagattgcagaagactgagaa-a 15425190  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  15425191 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 15425288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15516398 - 15516592
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaaga-tgagaaga 98  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| |||||| ||  || | || | || ||||  ||||||||||| |||||| |    
T  15516398 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagattgcagaagactgagaa-a 15516494  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  15516495 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 15516592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 29693448 - 29693327
Alignment:
Q  79 cattgcagaaga-tgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgt 177  Q
    |||||||||||| ||| ||||||||||||||  ||| ||  |||||| ||||| |||||| |||||||||| |||| |||| |||| |||| ||| ||||    
T  29693448 cattgcagaagactga-aagagtgaagcaaccactattttgaaaggatttgaaagcattgtatgcttgttctttgaagagctttgacaaagtacaattgt 29693350  T
Q  178 acgaattgtacaaccactatctc 200  Q
    ||||| |||||||||| ||||||    
T  29693349 acgaagtgtacaaccattatctc 29693327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 14989518 - 14989590
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | ||||||||| | || || ||||||||||||||||||||||||||||    
T  14989518 gaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctc 14989590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 45538458 - 45538574
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| |||||| |||||||||||||||| |  | ||||||||| |||  || |||||||    
T  45538458 attgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaatcacgtttgtac 45538557  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  45538558 gaagtgtacaaccacta 45538574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 20255539 - 20255657
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    |||||||| ||||||| |||||||  |||| |||| || |||| |||| |||||||   ||| |||||||||||  ||| ||  |||||| |||||||||    
T  20255539 cttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattacagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggca 20255638  T
Q  135 ttggatgcttgttccttga 153  Q
    |||||||||||||| ||||    
T  20255639 ttggatgcttgttctttga 20255657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22745699 - 22745641
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaa 59  Q
    ||||||||||||  |||||||||| |||||  || ||||||||||||||||||||||||    
T  22745699 tcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaa 22745641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 1237769 - 1237653
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| |||||||||||||||  |||||| |  | ||||||||| |||| || ||||| |    
T  1237769 attgcagaagaccggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatatttgttcttcaaagagcgttgacaaagtacttttgtgc 1237670  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  1237669 gaagtgtacaaccacta 1237653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 18151713 - 18151785
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | |||| |||| | || || ||||||||||||||||||||||||||||    
T  18151713 gaaggcattggatgcttattcttcaaagagcattgacatagtacgtttgtacgaattgtacaaccactatctc 18151785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 24551406 - 24551290
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  ||| || ||||||||||||||||||||||| |  | ||||||| | | || || |||||||    
T  24551406 attgcagaagactggaaaagtgaagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcgttaacatagtacgtttgtac 24551307  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  24551306 gaagtgtacaaccacta 24551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 22673862 - 22673790
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||| |||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  22673862 gaagacattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 22673790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 40845454 - 40845526
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | ||||||||| | || ||  ||||||||| |||||||||||||||||    
T  40845454 gaaggcattggatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctc 40845526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 10122 - 9927
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| || |||| ||||||| ||| ||||||||||||| ||||||||    
T  10122 tcaccagaagctgaagttcatcagaagatgagaaacttaaagcttcaaaggctgttctaaggatttaatcacgtctagcattgcagaagatcagaagagt 10023  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | | ||||  |||||||||| | | ||||||||||| ||||||||||| |||| ||||||||| |||| ||| ||||||||| |||| ||||||||    
T  10022 gcaacaacgactaattcaaatgaatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccacta 9927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 30441 - 30283
Alignment:
Q  4 ccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    ||||||| || | |||||||| |||||  || |||||||||||||||| ||||||| ||||| |||| || |||| ||||||||||||   |||||||||    
T  30441 ccagaagttgtaattcatcaggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtga 30342  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgtt 161  Q
    ||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| |||||||    
T  30341 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgtt 30283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 244185 - 244371
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||| ||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||  | ||||||||||  ||||||||||||||||    
T  244185 agctgaagatcat-agaagatgagagaattgaagtttcaaaggctgttcaaaagatttaatcacgcctggcgttgcagaagaccagaagagtgaagcaac 244283  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      |||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||| |||||||||||||    
T  244284 aactaattcaaaaggatttgaagacattggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccacta 244371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 220457 - 220262
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||   | || |||| || |||| ||||||||||||  || ||||    
T  220457 tcaccagaagctgaagttcatcaggagatgagagacttaaagcttcaaaggctgttcattggttttaatctcgtctaagcattgcagaagaccaggagag 220358  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||| ||||||||||| | | ||||| ||||||||||||||||  |||| ||||||||| |||| ||| ||||||||| |||| ||||||||    
T  220357 tgaagcaacggctaattcaaatgaatttgaa-gcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 220262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 377450 - 377650
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| |  |||||||||| |||||  || |||||| ||||||| |||||| ||  |||| |||| || |||| ||||||||||||   ||||||    
T  377450 tcaccagaagttatagttcatcaggagatgcaagacttaaaacttcaaatgttgttgaatggatttaatctcgtctaagcattgcagaagaccggaagag 377549  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  |||  |  |||||| ||||||||||||||||||||||| |||| |||| |||| |||| ||| |||||| || ||||||||||||||||    
T  377550 tgaagcaacgactatattgaaaggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtaccaagtgtacaaccactatct 377649  T
Q  200 c 200  Q
    |    
T  377650 c 377650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 642629 - 642828
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||  |||| |||||| |||| |||| |||||||| || |||||    
T  642629 tcaccagaaattgcagttcatcagaagatgagagacttaaagcttcaaaggttgttcaatggatttaatcacacctagcattacagaagatcaggagagt 642728  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||| |||| |||||||||||   | ||||||||||||||||||||||  |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  642729 gaaacaacggctaattcaaataaagttgaaggcattggatgcttgttttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 642828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 25096753 - 25096943
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||||| ||||| |||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||  ||||||||||||||||    
T  25096753 agctgaagatcatcataagataagagacttaaagcttcaaaggttgttcaaaggatttaattacgcctagcattgcagaagaccagaagagtgaagcaac 25096852  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttg---aaaaaggacatttgtacgaattgtacaaccacta 196  Q
       ||||||||||||| |||||| |||||||||||||||| || | ||||||||   |||||||||| ||||||||| |||||||||||||    
T  25096853 gattaattcaaaaggatttgaagacattggatgcttgttctttaaagagcgttgaaaaaaaaggacaattgtacgaagtgtacaaccacta 25096943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 25154723 - 25154913
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||||| ||||| |||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||  ||||||||||||||||    
T  25154723 agctgaagatcatcataagataagagacttaaagcttcaaaggttgttcaaaggatttaattacgcctagcattgcagaagaccagaagagtgaagcaac 25154822  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttg---aaaaaggacatttgtacgaattgtacaaccacta 196  Q
       ||||||||||||| |||||| |||||||||||||||| || | ||||||||   |||||||||| ||||||||| |||||||||||||    
T  25154823 gattaattcaaaaggatttgaagacattggatgcttgttctttaaagagcgttgaaaaaaaaggacaattgtacgaagtgtacaaccacta 25154913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 23881281 - 23881083
Alignment:
Q  2 caccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||  |||| ||||||||||| ||||||||||||  || |||||    
T  23881281 caccagaagctgaagttcatcagaagatgagagact-aaagcttcaaaaggttgtttaatggatttaatcacgcctagcattgcagaagaccaggagagt 23881183  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||  |||||||||| | | |||||||||||||||||||| |  |||| ||||||||| ||||  || ||||||||| |||||||||||||||||    
T  23881182 gaagcaacgactaattcaaatgaagttgaaggcattggatgcttgctttttgaagagcgttgacaaagtgcaattgtacgaagtgtacaaccactatctc 23881083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21198926 - 21199120
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||  | |||||||||  |||| | |    
T  21198926 tcaccaggagctgaagttcatcagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcacgcctagtactgcagaagaccagaaaaat 21199025  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    | |||||| ||||||||||| | | |||||||||||||||||| |||| |||   |||||||| |||| ||| ||||||||| ||||||| |||||    
T  21199026 g-agcaacggctaattcaaatgaatttgaaggcattggatgctcgttctttggaaagcgttgacaaagtacaattgtacgaagtgtacaatcacta 21199120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21072162 - 21072362
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||||||||||| |||||  || |||||||||| ||||||||||| |  |||| |||||| |  | ||||||||||||  ||||||||    
T  21072162 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttaaaaggttgttctatggatttaatcactcacagcattgcagaagaccagaagagt 21072261  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  21072262 gaagcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 21072361  T
Q  201 t 201  Q
    |    
T  21072362 t 21072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23412895 - 23413095
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| |  | || ||||||||||||  |||||||    
T  23412895 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatccaagcattgcagaagaccagaagag 23412994  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||   || ||  |||||| ||||| ||||||||||||||||  |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  23412995 tgaagcaacgattattttgaaaggatttgaaagcattggatgcttgttttttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 23413094  T
Q  200 c 200  Q
    |    
T  23413095 c 23413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6499453 - 6499255
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||  ||||||||||  |||||||||||||| ||||||||||  |||| |||||| || |  |||||||||||  || ||||    
T  6499453 tcaccagaagctgaagttcatatgaagatgaga--cttaaagcttcaaaaggttgttcaatggatttaatcacacccagtattgcagaagaccaggagag 6499356  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| |||||| | | |||||||||| ||||||||| |  |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  6499355 tgaagcaacatctatttcaaatgaagttgaaggcatcggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 6499256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 7745614 - 7745810
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| |||||||||||| |||||| |||||  || ||||||||||||||||||||||||  |||| |||| |  | || ||||| ||||||  |||||||    
T  7745614 tcacaagaagctgaagtacatcaggagatgtaagacttaaagcttcaaaggttgttcaatggatttaatcgcatccaagcattggagaagactagaagag 7745713  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  7745714 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 7745810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 17815184 - 17814984
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| || |||||||  |||||  || |||||||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  17815184 tcaccagaagctaaatttcatcaagagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 17815085  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| |   |||||| ||||| ||||| ||||||||||| |||| ||||||||| |||| ||| ||||||| | ||||||||||||||||    
T  17815084 tgaagcaacgactattctgaaaggatttgaaagcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacggagtgtacaaccactatct 17814985  T
Q  200 c 200  Q
    |    
T  17814984 c 17814984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21910772 - 21910572
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||||||| |||||  || |||||||| ||||||| |||| ||  |||| |||| || |||| |||| || ||||   ||| ||    
T  21910772 tcaccagaagctaaagttcatcaggagatgcaagacttaaagcgtcaaaggctgttgaattgatttaatctcgtctaagcattacaaaagactggaaaag 21910673  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||   || ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  21910672 tgaagcaacgattattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 21910573  T
Q  200 c 200  Q
    |    
T  21910572 c 21910572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21099626 - 21099821
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||| |||| ||  |||| ||||| ||||| |||| || ||||  |  |||||    
T  21099626 tcaccagaagctaaagttcatcagaagatcagagacttaaagcttcaaaggctgttaaatggatttaatcatgcctagcattacaaaagaccaagagagt 21099725  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||  |||||||||| | |  |||||||||||||||||||    |||| || |||| | |||| ||| ||||||||| |||||||||||||    
T  21099726 gaagcaacaactaattcaaatgaagctgaaggcattggatgcttgccttttgaagaacgtttacaaagtacaattgtacgaagtgtacaaccacta 21099821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 6512352 - 6512548
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||| || |||||||||| |||||  || |||||||||||||||||||||||   |||| |||| || |||| |||||| |||||   ||||||    
T  6512352 tcactagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcagtggatttaatctcgtctaagcattgctgaagactggaagag 6512451  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| |||||||||||||   ||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  6512452 tgaagcaacgactattttgaaaggatttgaaggcattgg---cttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 6512548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 20551107 - 20550915
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    |||||||||||||||||||| |||||  || |||||||||||||| ||||||||||  | || |||| || |||| |||||||||| |  ||||||||||    
T  20551107 cagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggttttaatctcgtctaagcattgcagaaaactagaagagtga 20551008  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||  ||| ||  ||| || ||||||||||||||||||||||| || | ||||||||| |||  ||| ||||||||| |||||||||||||    
T  20551007 agcaacgactattttgaaaagatttgaaggcattggatgcttgttctttaaagagcgttgacaaa-tacaattgtacgaagtgtacaaccacta 20550915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 89343 - 89543
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  |  |||||||||||||| |||||||||  |||| |||| || |||| | ||||||||||  |||||||    
T  89343 tcaccagaagttgtagttcatcaggagatgcaaaacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagaattgcagaagaccagaagag 89442  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||| | ||||| |||||| |||||||||| |||| |||| |||| | || ||| ||||||||| ||||||||||||||||    
T  89443 tgaagcaacgactattttgaaagaatttgaaagcattgcatgcttgttctttgaagagcattgacatagtacaattgtacgaagtgtacaaccactatct 89542  T
Q  200 c 200  Q
    |    
T  89543 c 89543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 41566359 - 41566555
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||| || |||||||||| |||||  || |||||||||||||| | | |||||  |||| |||| || |||| ||||||||||||  |||| ||||||    
T  41566359 cagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaagctattcaatggatttaatctcgtctaagcattgcagaagactagaaaagtgaa 41566458  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||| ||  |||||| |||||||||||||||| || ||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  41566459 gcaacgtctattttgaaaggatttgaaggcattggatgtttattctttgaagagcgttgatatagtacaattgtacgaagtgtacaaccactatctc 41566555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 12352795 - 12352916
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    ||||||||||||| || || |||||||||  ||||||||||| | | || |||||||||||||||||    |||| ||||||||| |||| ||| |||||    
T  12352795 cattgcagaagatcaggagggtgaagcaatggctaattcaaatgaagttaaaggcattggatgcttgcattttgaagagcgttgacaaagtacaattgta 12352894  T
Q  179 cgaattgtacaaccactatctc 200  Q
    |||| |||||||||||||||||    
T  12352895 cgaagtgtacaaccactatctc 12352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9398666 - 9398855
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||   ||||  ||| || ||          ||||| || |||||    
T  9398666 tcaccagaagttgaagttcatcagaagatgagagacttaaaggttcaaaggttgttcattggatttgatctcgtct----------aagatcaggagagt 9398755  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    | ||||||  |||||||||| | | |||||||||||| ||||||  |  |||| ||||||||| |||| ||| ||||||||| |||| ||||||||||||    
T  9398756 ggagcaacgactaattcaaatgaagttgaaggcattgaatgcttactttttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctc 9398855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 33022843 - 33022684
Alignment:
Q  38 taaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcatt 136  Q
    |||||||||||||| |||||||  |||| |||| |  |||| ||||||||||||   ||| |||||||||||  ||| ||  |||||| |||||||||||    
T  33022843 taaagcttcaaaggctgttcaatggatttaatctcatctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcatt 33022744  T
Q  137 ggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| |||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  33022743 ggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 33022684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 11994102 - 11993908
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  ||||||| |||||| | |||||||  |||| || | || ||||  |||||||||||   ||| ||    
T  11994102 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagtttcaaaagatgttcaacggattcaaactcgtctaaggattgcagaagactggaatag 11994005  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||| |||||||  || ||| ||||| ||||||||||||||||| |  | ||||||||| |||| || | |||||||| |||||||||||||    
T  11994004 tgaagcaacggctaatttgaagggatttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtacgtatgtacgaagtgtacaaccacta 11993908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 19536226 - 19536422
Alignment:
Q  6 agaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaag-agtgaa 103  Q
    |||||| |||||||||||| |||||  || ||||||||||||| || |||||||  |||| |||| || | || ||||||| ||||  | ||| ||||||    
T  19536226 agaagcagaagttcatcaggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtccaagcattgcaaaagaccaaaaggagtgaa 19536325  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||  ||  || ||| ||||| |||||||||| |||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  19536326 gcaacgacttttttgaatggatttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 19536422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 13545455 - 13545627
Alignment:
Q  15 agttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgcta 113  Q
    |||||||||| |||||  || ||||||||||||||||||||||||  || | |||| || |||| ||||||||||        ||||||||||||  |||    
T  13545455 agttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggacttaatctcgtctaagcattgcagaa--------gagtgaagcaacaacta 13545546  T
Q  114 attcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccac 194  Q
     ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| |||  |||||||| |||||||||||    
T  13545547 ctttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccac 13545627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 26784570 - 26784374
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||| ||| |||||  ||  ||||||||| ||||| |||||||  |||| |||| || | || ||||||| ||||  |||  ||    
T  26784570 tcaccagaagctgtagttcagcaggagatgcaagatttaaagctttaaaggctgttcaatggattcaatctcgtccaagcattgcaaaagaccagagcag 26784471  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||| | | | ||||||||| ||| |||| ||||||||| | || ||| ||||||||| |||||||||||||    
T  26784470 tgaagcaacgactattttgaaaggatttggaagaactggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 26784374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 4887112 - 4887042
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||||||||||||| |  | ||||||||| |||| || | |||||||| |||||||||||||    
T  4887112 ttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtgtgtacgaagtgtacaaccacta 4887042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 31118088 - 31117897
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    ||||||||| |||||||||| |||||  |  | |||||||||||| ||||||| ||  |||| || | || |||| ||||||||||||   ||| |||||    
T  31118088 cagaagctgcagttcatcaggagatgcaa--cataaagcttcaaaaggttgtttaacggatttaaactcgtctaagcattgcagaagactggaaaagtga 31117991  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||  ||||||  |||| | ||||||||||||||||||||||| |  | ||| ||||| |||| |||  |||||||| |||||| ||||||    
T  31117990 agcaacgactaatttgaaagaatttgaaggcattggatgcttgttcttcaaagagtgttgacaaagtacaaatgtacgaagtgtacatccacta 31117897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 42243895 - 42243700
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||| | |||| ||  |||| || | || |||| | ||||||||||   ||| ||    
T  42243895 tcaccagaagctgtagttcatcaggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaaaattgcagaagactggaaaag 42243798  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgac-gagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| |||||| |||| |||| ||||||||| |  ||||||||| |||  || |||||||||| |||||||||||||    
T  42243797 tgaagcaacaactattttgaaaggatttgaagacatttgatgtttgttccttaaaagagcgttgacaaaatacgtttgtacgaagtgtacaaccacta 42243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 16607648 - 16607528
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    ||||||||||||  |||||  || |||||| ||||||||| | | | |||||||||||||| |||| ||| |||  || ||||| ||||||||| | |||    
T  16607648 cattgcagaagaatagaagcctggagcaacggctaattcagaggaatttgaaggcattggaagcttattctttggagaacgttggaaaaggacaatagta 16607549  T
Q  179 cgaattgtacaaccactatctc 200  Q
    | || |||||||||||||||||    
T  16607548 c-aagtgtacaaccactatctc 16607528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 25930205 - 25930278
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctct 201  Q
    ||||||||||||||||| ||  |  | ||||||||| | || || |||||||||||||||||||||||||||||    
T  25930205 gaaggcattggatgcttatttttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctct 25930278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 30743077 - 30743000
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| |||||||||||||||| || ||| |  | ||||||||| |||| || |||||||||| |||||||||||||    
T  30743077 aaaggatttgaaggcattggatgtttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 30743000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 28464389 - 28464461
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctct 201  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| ||||||||||||||||||    
T  28464389 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctct 28464461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 26765594 - 26765519
Alignment:
Q  120 aaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccact 195  Q
    ||||| ||||||||||||||||||| ||| |  | ||||| ||||| || || |||||||||| ||||||||||||    
T  26765594 aaggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtacgtttgtacgaagtgtacaaccact 26765519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 14086539 - 14086652
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgta 178  Q
    |||||||||||   ||| ||||||||||| |||| ||  ||  || ||||| |||||||||||||||||||   | ||||||||| |||| || ||||||    
T  14086539 attgcagaagactggaaaagtgaagcaacggctattttgaagtgatttgaatgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 14086638  T
Q  179 cgaattgtacaacc 192  Q
    |||| |||||||||    
T  14086639 cgaagtgtacaacc 14086652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 32160879 - 32160786
Alignment:
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| |||||||  |||||| ||||||||||||||||||| | | |  | ||||||||| |||| || | |||||||| ||||| |||||||    
T  32160879 agcaacagctaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagaacgtatgtacgaagtgtacgaccacta 32160786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 9089057 - 9088985
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||  ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  9089057 gaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 9088985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26759245 - 26759169
Alignment:
Q  120 aaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| ||||||||||||||||||| ||| |  | ||||| ||||| || |  |||||||||| |||||||||||||    
T  26759245 aaggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtaagtttgtacgaagtgtacaaccacta 26759169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 29138455 - 29138527
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | ||||||||  | || || |||||||||| |||||||||||||||||    
T  29138455 gaaggcattggatgcttattcttcaaagagcgttgtcatagtacgtttgtacgaagtgtacaaccactatctc 29138527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 97; Significance: 7e-48; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 159270 - 159074
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaag 104  Q
    ||||||||||||  ||||| |||||||||| |||| ||||||||||| |||||||| |||| ||||||| ||||||||||| ||||| ||||||||||||    
T  159270 cagaagctgaagaccatcaaaagatgagagacttagagcttcaaaggatgttcaaaggatttaatcacgtctaacattgcaaaagatcagaagagtgaag 159171  T
Q  105 caactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctct 201  Q
    |||| ||||||||||| | | |||||||||||  |||||||||| |||| ||||||||| |||||||| ||||| ||| |||| |||||||| ||||    
T  159170 caacggctaattcaaatgaatttgaaggcattatatgcttgttctttgaagagcgttgacaaaggacaattgtatgaagtgtaaaaccactacctct 159074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39645 - 39497
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  ||  ||||||||||||||| |||||||  |||| |||| || |||  |||| || ||||  |||||||    
T  39645 tcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaggcattacaaaagactagaagag 39546  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttc 148  Q
    |||||||||  ||||||  |||||| ||||||||||| ||||| |||||    
T  39545 tgaagcaacaactaatttgaaaggatttgaaggcattagatgcatgttc 39497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 137705 - 137557
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||||  ||  ||||||||||||||| |||||||  |||| |||| || |||  |||| || ||||  |||||||    
T  137705 tcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaggcattacaaaagactagaagag 137606  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttc 148  Q
    |||||||||  ||||||  |||||| ||||||||||| ||||| |||||    
T  137605 tgaagcaacaactaatttgaaaggatttgaaggcattagatgcatgttc 137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 40846 - 40661
Alignment:
Q  11 ctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactg 110  Q
    |||||| |||||||||||||||||  || |||||||||||| ||||||||||||| |||||| |||| ||||||||||||  |||||||||||||||| |    
T  40846 ctgaagatcatcagaagatgagagaattgaagcttcaaaggctgttcaaaagatttaatcacacctagcattgcagaagaccagaagagtgaagcaacgg 40747  T
Q  111 ctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||| | ||||||||||  |||| | |||| |||| |||||||||||||| ||| ||||| ||| |||||||||||||    
T  40746 ctaattcaaaagaatttgaaggcatatgatggtggttctttgaagagcgttgaaaaagaacaattgtaagaagtgtacaaccacta 40661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 22454876 - 22455069
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagag 99  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||  |||| ||||||||| ||||||||||||||  |||||||    
T  22454876 tcaccagaagctgaagttcttcagaagatgagagacttaaagcttcaaaagggtgttcaatggatttaatcacgcccaacattgcagaagaccagaagag 22454975  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacca 193  Q
    ||||||||| | ||||||||| | | |||||||||||||||||||| |  ||||  |||||||| |||| ||| ||||||||| ||||||||||    
T  22454976 tgaagcaacagttaattcaaatgaagttgaaggcattggatgcttgctttttgaaaagcgttgacaaagtacaattgtacgaagtgtacaacca 22455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23595456 - 23595649
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||||||||||| ||  |||||||||||||||||||||||| |||| |||||| |||| ||||||||||||  ||||||||    
T  23595456 tcaccagaagctgaagatcatcagaagatgaaagaattaaagcttcaaaggttgttcaaaggatttaatcacacctagcattgcagaagaccagaagagt 23595555  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||  |||||||||| | | ||||||||||||||| |||||||  |||  |||||||| |||| ||| ||||||||| |||| ||||||||    
T  23595556 gaagcaacgactaattcaaatgaatttgaaggcattggattcttgttctctga--agcgttgacaaagtacaattgtacgaagtgtagaaccacta 23595649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18376792 - 18376992
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| ||||||||||  ||||||||||| |||||||||||||||| |||||||  |||| |||| || |||| |||||||||||||   || ||    
T  18376792 tcaccagaagttgaagttcatttgaagatgagagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagattttaatag 18376891  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||| ||||| ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  18376892 tgaatcaactactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 18376991  T
Q  200 c 200  Q
    |    
T  18376992 c 18376992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 41121606 - 41121801
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||||||| || |||  ||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||  || ||||    
T  41121606 tcaccagaagctgaagatcatcagaagctgtgagaattaaagcttcaaaggctgttcaaaggatttaatcacgcctagcattgcagaagattggatgagt 41121705  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||   |||||||||||||| |||||||||||||||  ||| || |||| |||| |||| |||| ||| |||| |||| |||||||||||||    
T  41121706 gaagcaaagactaattcaaaaggatttgaaggcattggattattgctctttgaagagcattgacaaagtacaattgtgcgaaatgtacaaccacta 41121801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24377315 - 24377115
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||  |||||  || |||||||||||||| ||||||||||  |||| ||||||||||| ||||||||||||  |||||||    
T  24377315 tcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgcctagcattgcagaagaccagaagag 24377216  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||  ||||  ||||||||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  24377215 tgaagcaacgactattttgaaaggttttgagagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 24377116  T
Q  200 c 200  Q
    |    
T  24377115 c 24377115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 25829348 - 25829148
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||||||| |||||  || |||| ||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  25829348 tcaccagaagctaaagttcatcaggagatgcaagacttagagcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 25829249  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  25829248 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 25829149  T
Q  200 c 200  Q
    |    
T  25829148 c 25829148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 26618998 - 26619187
Alignment:
Q  11 ctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactg 110  Q
    |||||| ||| |||||| ||| ||  || ||||||||||||||||||||| |||| ||||||||||| ||||||||||||   ||||| |||||||||      
T  26618998 ctgaagatcaacagaagctgaaagaattgaagcttcaaaggttgttcaaatgatttaatcacgcctatcattgcagaagactggaagaatgaagcaacaa 26619097  T
Q  111 ctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||| |||||||| | |||||||||||| |||||| ||| |||  || ||||||||||||||| ||||||||| |||||||||||||||||    
T  26619098 ctatttcaaaagaatttgaaggcattgaatgcttattctttggagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctc 26619187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 25189598 - 25189416
Alignment:
Q  14 aagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgcta 113  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||  |||| |||||| |||| ||||||||||||  || ||||||||||||   |||    
T  25189598 aagtttattagaagatgagagacttaaagcttcaaaggttgttcaatggatttaatcacacctagcattgcagaagaccaggagagtgaagcaatgacta 25189499  T
Q  114 attcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||| | | ||||||||||||||| |||| |  |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  25189498 attcaaatgaagttgaaggcattggattcttgctttttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccacta 25189416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19540630 - 19540430
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||  |||||  || |||||||||||||| |||||||||  |||| |||| |  |||| ||||||||||||  || ||||    
T  19540630 tcaccagaagctgaagttcatcatgagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcatctaagcattgcagaagactaggagag 19540531  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |||| ||| |||||  ||||||| ||||||||||||||| || | ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  19540530 tgaagcaacggctatttcgaaaggttttgaaggtattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 19540431  T
Q  200 c 200  Q
    |    
T  19540430 c 19540430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22272346 - 22272146
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||||||| ||||||  ||  || ||||||||||||||||| |||| ||||||| ||| ||||||||||||   ||||| |    
T  22272346 tcaccagaagctgaagatcatcagaagctgagagaattggagtttcaaaggttgttcaaatgatttaatcacgtctatcattgcagaagactggaagaat 22272247  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgc-ttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||   |||||||||| ||| ||||||||||||||||| || ||| |||  ||| |||||||||||| | ||||| ||| ||||||||||||||||    
T  22272246 gaagcaatgactaattcaaatggatttgaaggcattggatgcttttttcgttggagagagttgaaaaaggaaaattgtaagaagtgtacaaccactatct 22272147  T
Q  200 c 200  Q
    |    
T  22272146 c 22272146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 44881380 - 44881181
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||| ||||||||| |||||||||| |||||   || |||||||||||| |||||||| || | ||||||| ||| ||||||||||||   ||||| |    
T  44881380 tcaccaaaagctgaagatcatcagaagctgagataattgaagcttcaaaggctgttcaaatgacttaatcacgtctatcattgcagaagactggaagaat 44881281  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| | ||||||||||| ||  |||||||||||||||| || ||  |||  ||| |||||||||||||| ||||||||| |||||||||||||||||    
T  44881280 gaagcagcagctaattcaaatgggtttgaaggcattggatgtttttttgttggagagagttgaaaaaggacaattgtacgaagtgtacaaccactatctc 44881181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 20568636 - 20568834
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  || |||||||||| ||||| ||||| |  |||| |||| || |||| ||||||||||||   ||||||    
T  20568636 tcaccagaagctgtagttcatcaggagatgcaagacttaaagctttaaaggctgttccatggatttaatctcgtctaagcattgcagaagactggaagag 20568735  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    |||||||||  | | ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  20568736 tgaagcaacaacaattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatc 20568834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 18430835 - 18431020
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||||||||| ||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||||||||||  |||||  |||||||||    
T  18430835 agctgaagatcatcagaagctgaaagaattaaagcttcaaaggttgttcaaatgttttaatcacgcctatcattgcagaagactagaagcatgaagcaac 18430934  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccac 194  Q
     ||||||||||||| | |||||||||||| |||||| ||| |||   | ||||| |||| |||| | ||||||| |||||||||||    
T  18430935 ggctaattcaaaagaatttgaaggcattgaatgcttattctttggaaaacgttggaaaacgacaatagtacgaagtgtacaaccac 18431020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21537134 - 21537334
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||| ||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| ||  ||| ||||||||||||  |||||||    
T  21537134 tcactagaagatgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaaacattgcagaagaccagaagag 21537233  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||  ||| |||||||||||||||| |  |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  21537234 tgaagcaacgactattttgaaaggttttggaggcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 21537333  T
Q  200 c 200  Q
    |    
T  21537334 c 21537334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 30667199 - 30667003
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||| || |||||||||| |||||  ||  |||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||||| ||||    
T  30667199 cagaagttgtagttcatcaggagatgcaagaattaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagaatgaa 30667100  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||| ||  |||||| |||||||||||||||||||| || |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  30667099 gcaacgactattttgaaaggatttgaaggcattggatgcttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 30667003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 39037528 - 39037724
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||| |||| | ||||| ||||||||||||||| |||||| ||||||||||||||||   ||||  ||| || |||| ||||||||||||| || | ||    
T  39037528 tcaccggaagttaaagttgatcagaagatgagagacttaaaacttcaaaggttgttcattggatttgatctcgtctaagcattgcagaagattaggaaag 39037627  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||| ||||||||||| | | ||||||||||| |||||||| |  |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  39037628 tgaagcaacggctaattcaaatgaagttgaaggcattagatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 39037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13963864 - 13964064
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    |||| |||||||  |||||||||| |||||  ||  |||||||||||||||||||||||  |||| |||| || |||| ||||| |||||| ||| ||||    
T  13963864 tcactagaagctctagttcatcagtagatgcaagatttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgtagaagactga-aaga 13963962  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  |||| | ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  13963963 gtgaagcaacgactattttgaaagaatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatc 13964062  T
Q  199 tc 200  Q
    ||    
T  13964063 tc 13964064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 23235221 - 23235021
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||  |||||  || |||||||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  23235221 tcaccagaagctctagttcatcatgagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 23235122  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    | |||||||  ||| ||  |||| | ||||||||||||||||||| ||| |||| ||| ||||| |||| ||| ||||||||| ||||||||||||||||    
T  23235121 taaagcaacgactattttgaaagaatttgaaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatct 23235022  T
Q  200 c 200  Q
    |    
T  23235021 c 23235021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 19115287 - 19115097
Alignment:
Q  10 gctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaact 109  Q
    ||||||| |||||||||| ||| ||  || |||||||||||||||||||||  ||| |||| ||||||  |||||||||||   ||||| |||||||||     
T  19115287 gctgaagatcatcagaagctgaaagaattgaagcttcaaaggttgttcaaagaatttaatctcgcctactattgcagaagactggaagaatgaagcaaca 19115188  T
Q  110 gctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
     |||||||| | |||  ||||| || ||||||| | ||| |||  ||| |||||||||||||| ||||||||| |||||||||||||||||    
T  19115187 actaattcagatggatgtgaagccagtggatgcctattcgttggagagtgttgaaaaaggacaattgtacgaagtgtacaaccactatctc 19115097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10009635 - 10009836
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatga-gaaga 98  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||| || |||||||  |||| |||| || | || ||||||| ||||  | || ||    
T  10009635 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtccaagcattgcaaaagaccaagagga 10009734  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| || |||||| | || ||| ||||||||| |||||||||||||||    
T  10009735 gtgaagcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagaacgttgacatagtacaattgtacgaaatgtacaaccactatc 10009834  T
Q  199 tc 200  Q
    ||    
T  10009835 tc 10009836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22187988 - 22188188
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaaga-tgagaaga 98  Q
    |||||||||| ||||||||||||| | |||  || |||||||||||||||| |||||||  |||| |||| || ||||  ||||||||||| ||| ||||    
T  22187988 tcaccagaagttgaagttcatcaggacatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagtattgcagaagactga-aaga 22188086  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatc 198  Q
    ||||||||||  ||| ||  ||  || ||||||||||||||||||||||| |||| ||||||| | |||| | | ||||||||| |||||||||||||||    
T  22188087 gtgaagcaacaactattttgaatagatttgaaggcattggatgcttgttctttgaagagcgttaacaaagtataattgtacgaagtgtacaaccactatc 22188186  T
Q  199 tc 200  Q
    ||    
T  22188187 tc 22188188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25037145 - 25037345
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || ||||||||||||||||||||||||  |||| ||||  | | || ||||||||||||   ||||||    
T  25037145 tcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgcagaagactggaagag 25037244  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||| | |||  ||||||  |||||| ||||| |||||||||| |||||| ||||  |||||||| |||| ||| |||| |||| ||||||||||||||||    
T  25037245 tgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagtgtacaaccactatct 25037344  T
Q  200 c 200  Q
    |    
T  25037345 c 25037345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25041252 - 25041452
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || ||||||||||||||||||||||||  |||| ||||  | | || ||||||||||||   ||||||    
T  25041252 tcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgcagaagactggaagag 25041351  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||| | |||  ||||||  |||||| ||||| |||||||||| |||||| ||||  |||||||| |||| ||| |||| |||| ||||||||||||||||    
T  25041352 tgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagtgtacaaccactatct 25041451  T
Q  200 c 200  Q
    |    
T  25041452 c 25041452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 9015259 - 9015454
Alignment:
Q  4 ccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    |||||| || ||||||||||| |||||  || ||||||||||||||||||||||||  |||| ||||  | |||| ||||||||||||   |||||||||    
T  9015259 ccagaaactaaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtga 9015358  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    | ||||  ||| ||  |||||| ||||| ||||||||||||| ||| |||| ||||||||| |||| ||| |||||||   |||||||||||||||||    
T  9015359 aacaacaactattttgaaaggatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacg--gtgtacaaccactatctc 9015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 24850551 - 24850748
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||||| |||||||| |||||| |||||  || |||||||||||||| ||||||||||  |||| |||| || |||  |||||| |||||  ||||||    
T  24850551 tcaccagatgctgaagtacatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctacgcattgctgaagaccagaaga 24850650  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||   || ||  |||||| || || ||||||||||||||||| |||| ||||||||| |||| |||  |||||||| |||||||||||||    
T  24850651 gtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 24850748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 18702940 - 18702752
Alignment:
Q  12 tgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgc 111  Q
    ||||| |||||||||| ||| ||  || ||||||||||||||||||||| | || ||||||| ||| |||| |||||||  |||||  ||||| ||| ||    
T  18702940 tgaagatcatcagaagctgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgtctatcattacagaagactagaagcatgaagtaacggc 18702841  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||| | ||||||||||| |||||||  || |||  || ||||| ||||||||| ||||||||| | | |||| ||||||||    
T  18702840 taattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtatgcaacaactatctc 18702752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 20151957 - 20152117
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcat 135  Q
    ||||||||||||| |||||||||  |||| |||| || |||| ||||||||||||   ||| ||||||||||| | || ||  |||||| ||||||||||    
T  20151957 ttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacggttagtttgaaaggatttgaaggcat 20152056  T
Q  136 tggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  20152057 tggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 20152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 24576250 - 24576053
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagatt-aaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||||||||| |||||||| || |||||  |  ||||||||||||||||||||||||  |||| ||||| |  |||| ||||||||||||   ||| |    
T  24576250 tcaccagaagctaaagttcattaggagatgcaatacttaaagcttcaaaggttgttcaatggatttaaatctcatctaagcattgcagaagactggaaaa 24576151  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| || |||||||||| || |||||| |||| ||| ||||| |||| ||| ||||||||| |||||||||||||    
T  24576150 gtgaagcaacaactattttgaaaggatttaaaggcattggttgtttgttcgttgaagagagttgacaaagtacaattgtacgaagtgtacaaccacta 24576053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23184199 - 23184386
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||| |||||||||||||| ||  || ||||||||||||||||||||| |||| |||||| |||| || |||||||||  ||||||||    
T  23184199 tcaccagaagctgaagatcatcagaagatga-agaatt-aagcttcaaaggttgttcaaaggatt-aatcacacctagca-tgcagaagaccagaagagt 23184294  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| ||  |||||||||| | | ||||||||||||||| | |||||  |||  |||||||| |||| ||| ||||||||| |||| ||||||||    
T  23184295 gaagc-acgactaattcaaatgaatttgaaggcattggattc-tgttctctga--agcgttgacaaagtacaattgtacgaagtgtagaaccacta 23184386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 30621394 - 30621230
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcat 135  Q
    |||||| ||||||||||||||||  |||| |||| ||  ||| ||||||||||||   ||||||||||||| |  ||| ||  |||||| ||||||||||    
T  30621394 ttaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaaggatttgaaggcat 30621295  T
Q  136 tggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| ||| || |||| ||||||||| |||| ||| ||||||||| |||| ||||||||||||    
T  30621294 tggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctc 30621230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 30624015 - 30623851
Alignment:
Q  37 ttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcat 135  Q
    |||||| ||||||||||||||||  |||| |||| ||  ||| ||||||||||||   ||||||||||||| |  ||| ||  |||||| ||||||||||    
T  30624015 ttaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaaggatttgaaggcat 30623916  T
Q  136 tggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| ||| || |||| ||||||||| |||| ||| ||||||||| |||| ||||||||||||    
T  30623915 tggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctc 30623851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 6574010 - 6574206
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa--cattgcagaagatgagaaga 98  Q
    |||| ||||| || ||||||||||||||||  |  | ||||||||||||||||||||||  |||| |||| || ||||  ||||||||||||   ||| |    
T  6574010 tcactagaagttgcagttcatcagaagatgcaa--cataaagcttcaaaggttgttcaattgatttaatctcgtctaatgcattgcagaagactggaaaa 6574107  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggac-atttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| |||||||||||||||| |||||| |  | ||||||||| |||| || | ||||||||| |||||||||||||    
T  6574108 gtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaaattgtacgaagtgtacaaccacta 6574206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 28140509 - 28140705
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||||||||||||||| | |||||  || |||||| |||||||||||||||||  |||| |||| || | || ||||||| ||||| |   |||||||    
T  28140509 cagaagctgaagttcatcgggagatgcaagacttaaaacttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagatcattggagtgaa 28140608  T
Q  104 gcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||  ||| ||  |||||| |||||  |||||||||||||||| |||| ||||||||| | || ||| |||||| || ||||| | |||||||||    
T  28140609 gcaacaactattttgaaaggatttgaaaacattggatgcttgttctttgaagagcgttgacatagtacaattgtacaaagtgtaccatcactatctc 28140705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 38781596 - 38781417
Alignment:
Q  18 tcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaatt 116  Q
    |||||||| ||||  || ||||||||||||||||||||||||  |||| |||| || |||| || || ||||||   ||| |||||||||||  ||| ||    
T  38781596 tcatcagaggatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaaacaatgtagaagactggaaaagtgaagcaacaactattt 38781497  T
Q  117 caaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
      |||||| |||||||||||| ||| |||||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  38781496 tgaaaggatttgaaggcattgaatgattgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 38781417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 40782612 - 40782491
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    ||||||| ||||  ||| ||||||||||||  ||| ||  |||||| ||||| |||||||||| |||||| |||| ||||||||| | || ||| |||||    
T  40782612 cattgcaaaagaccagaggagtgaagcaacgactattttgaaaggatttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgta 40782513  T
Q  179 cgaattgtacaaccactatctc 200  Q
    |||| |||||||||||||||||    
T  40782512 cgaagtgtacaaccactatctc 40782491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 28711710 - 28711780
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||||||||||||| |  | |||||||||||||| || |||||||||| |||||||||||||    
T  28711710 ttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccacta 28711780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22317808 - 22317611
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  | |||||||  |||||  || |||||||||||||||| | ||||   |||| |||| |  |||| ||||||| ||||  |||||||    
T  22317808 tcaccagaagctctatttcatcaagagatgcaagacttaaagcttcaaaggcttttcattggatttaatctcatctaagcattgcataagactagaagag 22317709  T
Q  100 tgaagcaactgctaattca-aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||   |||||| || |||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| | |||||||||||    
T  22317708 tgaagcaacgactatttttgaaaggatttaaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtatacaaccacta 22317611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 31800892 - 31800973
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| ||||| |||||||||| ||| || |  | ||||||||| |||| ||||||||||||| |||||||||||||||||    
T  31800892 aaaggatttgaaagcattggatgtttgatcttcaaagagcgttgacaaagtacatttgtacgaagtgtacaaccactatctc 31800973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 24779518 - 24779357
Alignment:
Q  40 aagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattgg 138  Q
    ||||||||||||||||||||  |||| |||| || | || ||||| | ||||  ||| ||||||||||||  ||| ||  |||||| ||||| |||| ||    
T  24779518 aagcttcaaaggttgttcaatggattcaatctcgtccaagcattgaaaaagaccagaggagtgaagcaacgactattttgaaaggatttgaaagcatcgg 24779419  T
Q  139 atgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||| |||||| |||| ||| ||||| | || ||| ||||| ||| |||| ||||||||||||    
T  24779418 atgtttgttctttgaagagtgttgacatagtacaattgtatgaagtgtataaccactatctc 24779357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 3277116 - 3277044
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  3277116 gaaggcattggatgcttattcttcaaagagcgttgatatagtacgtttgtacgaagtgtacaaccactatctc 3277044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 14581600 - 14581529
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  14581600 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 14581529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 22776303 - 22776374
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  22776303 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 22776374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 22781681 - 22781752
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  22781681 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 22781752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 28550933 - 28551004
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  28550933 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 28551004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 44840519 - 44840448
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  44840519 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 44840448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7609176 - 7609118
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaa 59  Q
    |||||||||||| ||||||||||| |||||  || ||||||||||||| || |||||||    
T  7609176 tcaccagaagctaaagttcatcaggagatgcaagacttaaagcttcaagggctgttcaa 7609118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 28701234 - 28701308
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacca 193  Q
    |||||| ||||||||||||||||||||||| |  | | ||||||| |||| |  |||||||||| ||||||||||    
T  28701234 aaaggatttgaaggcattggatgcttgttcttcaaagggcgttgacaaagtaagtttgtacgaagtgtacaacca 28701308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 6392768 - 6392651
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttcct-tgacgagcgttgaaaaaggacatttgta 178  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||| |||||||||||||||||||   | ||||||||| |||| || ||||||    
T  6392768 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 6392669  T
Q  179 cgaattgtacaaccacta 196  Q
    |||| ||  |||||||||    
T  6392668 cgaagtgcgcaaccacta 6392651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 10896422 - 10896518
Alignment:
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||| |||| |||| ||| | | ||||||||||||||||| |||   || |||||||  ||||||||| | |||| ||||||||||||||||||||    
T  10896422 agcaacggctatttcagaagaattagaaggcattggatgcttattcgccgaagagcgttagaaaaggacaatagtac-aattgtacaaccactatctc 10896518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 30557339 - 30557403
Alignment:
Q  133 cattggatgcttgttccttgac-gagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||||||||  |  ||||||||| |||| || |||||||||| |||||||||||||    
T  30557339 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 30557403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 45087150 - 45087266
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||| ||||| ||||||| |||    | ||||||||| |||| || |||||||    
T  45087150 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaatgcattagatgcttattctcaaaagagcgttgacaaagtacgtttgtac 45087249  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  45087250 gaagtgtacaaccacta 45087266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 89; Significance: 4e-43; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 49552 - 49352
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  || ||||||||||||||| ||||||||  |||| |||| || |||| |||||||||||||  ||||||    
T  49552 tcaccagaagttgtagttcatcaggagatgcaagtcttaaagcttcaaagtttgttcaatggatttaatctcgtctaagcattgcagaagatttgaagag 49453  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||| ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||| |||||||    
T  49452 tgaagcaactactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatct 49353  T
Q  200 c 200  Q
    |    
T  49352 c 49352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 32691 - 32505
Alignment:
Q  15 agttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgcta 113  Q
    |||||||||| |||||  || |||||||||||||||  |||||||  |||| |||| || |||| ||||||||||||   ||||||||||| |||  |||    
T  32691 agttcatcaggagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagtaacgacta 32592  T
Q  114 attcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
     ||  |||||| ||||| ||||| ||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  32591 ttttgaaaggatttgaatgcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 32505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 339 - 432
Alignment:
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| |||||||  |||||| ||||||||||||||||||| | | |  | ||||||||| |||| || | |||||||| ||||| |||||||    
T  339 agcaacggctaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccacta 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 1421 - 1612
Alignment:
Q  9 agctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaac 108  Q
    |||||||| |||||||||| ||||||  || ||||||||||||||||||||| |||| ||||||||| | ||||||||||||  | | ||||||||||||    
T  1421 agctgaagatcatcagaagctgagagaattgaagcttcaaaggttgttcaaatgatttaatcacgcccatcattgcagaagactataggagtgaagcaac 1520  T
Q  109 tgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
      ||| |||||||||| |||||||||||||| | || ||| |||| || ||||| ||||||||| ||||||||| |||||||||||||||||    
T  1521 gactatttcaaaaggatttgaaggcattggacgtttattctttgaagaacgttggaaaaggacaattgtacgaagtgtacaaccactatctc 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 60236 - 60035
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    |||||||||||| |||||||||||||||||  || |||||||||||||||| |||||||  |||| |||| || | || | ||||||||||   ||| ||    
T  60236 tcaccagaagctaaagttcatcagaagatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtccaagaattgcagaagactggaaaag 60137  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| |||||| |||||||||||||||| |||| ||||||||| | || ||| ||||||||| ||||||||||||||||    
T  60136 tgaagcaacgactattttgaaaggatttgaagccattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 60037  T
Q  200 ct 201  Q
    ||    
T  60036 ct 60035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 8144 - 7946
Alignment:
Q  3 accagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtg 101  Q
    |||||||||| ||||||||||| |||||  |  ||||||||||||||||||||||||  |||| |||| || | || ||||| ||||||    || ||||    
T  8144 accagaagctaaagttcatcaggagatgcaaaacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgtagaagactgtaaaagtg 8045  T
Q  102 aagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||  ||| ||  |||||| |||||  |||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||||||||||    
T  8044 aagcaacgactattttgaaaggatttgaattcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctc 7946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 151783 - 151908
Alignment:
Q  22 cagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaa 121  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| |||||| ||||  |||| ||||||  ||||  ||||| |||| |||||||||||     
T  151783 cagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcacacctagtattgtagaagaccagaaacgtgaaacaacggctaattcaaat 151882  T
Q  122 ggaattgaaggcattggatgcttgtt 147  Q
    | | ||||||||||| ||||||||||    
T  151883 gaatttgaaggcattagatgcttgtt 151908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 1880 - 1684
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| | ||||||||||  |||||||    
T  1880 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagctttgcagaagactagaagag 1781  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||| ||||  ||| ||  |||||| ||||| |||||||||||||  || |||| ||||||||| |||| ||| ||||| ||| |||||||||||||    
T  1780 tgaaacaacgactattttgaaaggatttgaaagcattggatgcttactctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccacta 1684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 36076 - 36275
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||| ||||||||| |||||||||  |||||   || ||||||||||||||||||||  |||| ||||||| ||| ||||||||||||   ||||| |    
T  36076 tcaccataagctgaagatcatcagaatctgagaaaattgaagcttcaaaggttgttcaattgatttaatcacgtctatcattgcagaagactggaagaat 36175  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||  ||| |||||| ||  || |||||||||||||||| ||| |||  ||| |||||||| ||||| ||||||||| |||||||||||||||||    
T  36176 gaagcaacaactatttcaaatggttttaaaggcattggatgctttttcgttggagagagttgaaaatggacaattgtacgaagtgtacaaccactatctc 36275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 9998 - 10195
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa-ggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaaga 98  Q
    |||||||||||||||||||||||| |||||  || |||||||||||||| ||||||||||  |||| |||| |  |||| | ||||||||||  ||||||    
T  9998 tcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcatctaagctttgcagaagactagaaga 10097  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||  ||| ||  |||||| ||||||||||||||||||||||  || | ||||||||| |||| ||| ||||||||| ||||| |||||||    
T  10098 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttttttaaagagcgttgacaaagtacaattgtacgaagtgtacgaccacta 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 695 - 495
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||| ||||||| |||||  || |||||||| ||||||| |||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  695 tcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgcagaagactggaatag 596  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||||||||| | || ||| ||||||||| |||||||||| |||||    
T  595 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccattatct 496  T
Q  200 c 200  Q
    |    
T  495 c 495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18512 - 18712
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||    ||  ||||||||||||||| |||||||  |||| |||| || |||| ||||||||||||   ||||||    
T  18512 tcaccagaagctgcagttcatcaggagacacaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagag 18611  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||| ||||||| |||| ||||||||| |||| ||| || |||||| ||||||||||||||||    
T  18612 tgaagcaacgactattttgaaaggatttgaaggcattggatacttgttctttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactatct 18711  T
Q  200 c 200  Q
    |    
T  18712 c 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 14833 - 14672
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   |||||||||||||||  ||| ||  |||||| |||||||||    
T  14833 cttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaggca 14734  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||| | |||| ||||||||| |||| ||| || |||||| |||||||||||||    
T  14733 ttggatgcttgtactttgaagagcgttgacaaagtacaattttacgaagtgtacaaccacta 14672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 36666 - 36867
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||||||||||||||  |||||  || |||||||||||||||| || ||||   ||| |||| || |||| ||||||||| ||  |||| ||    
T  36666 tcactagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgcagatgactagaaaag 36765  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||||||  |||||| ||||||||||||||||||||||| || | ||| ||||| |||| ||| ||||||||| ||||||||||||| ||    
T  36766 tgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacct 36865  T
Q  200 ct 201  Q
    ||    
T  36866 ct 36867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 42339 - 42138
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||||||||||||||||  |||||  || |||||||||||||||| || ||||   ||| |||| || |||| ||||||||| ||  |||| ||    
T  42339 tcactagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgcagatgactagaaaag 42240  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||||||  |||||| ||||||||||||||||||||||| || | ||| ||||| |||| ||| ||||||||| ||||||||||||| ||    
T  42239 tgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacct 42140  T
Q  200 ct 201  Q
    ||    
T  42139 ct 42138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 1875 - 1714
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   || ||||||||||||  ||| ||  |||||| |||||||||    
T  1875 cttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaggagtgaagcaacaactattttgaaaggatttgaaggca 1776  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||||| | |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  1775 ttggatgcttgtactttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 5581 - 5781
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||| |||||||||||||||||| |||||  || |||| |||||||||||||||||||  |||| |||| || | ||  |||| |||||||  ||||||    
T  5581 tcacctgaagctgaagttcatcaggagatgcaagacttagagcttcaaaggttgttcaatggatttaatctcgtccaagtattgtagaagattggaagag 5680  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    || ||||||  ||| ||  ||||||  |||||||||||||||||||||| || | ||||||||| |||| ||| ||||||||| |||||||| |||||||    
T  5681 tggagcaacatctattttgaaaggatatgaaggcattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaactactatct 5780  T
Q  200 c 200  Q
    |    
T  5781 c 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15337 - 15137
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||| |||||| ||| || |||||  || |||||||||||||||| || ||||  |||| |||| || |||| ||||||||||||  |||||||    
T  15337 tcaccagaagatgaagtgcataaggagatgcaagacttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccagaagag 15238  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||| |  ||| ||  |||||| ||||| |||||||||| |||||| ||||  |||||||| |||| ||| ||||||||| ||||||||||||||||    
T  15237 tgaagcatcgactattttgaaaggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 15138  T
Q  200 c 200  Q
    |    
T  15137 c 15137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20862 - 21062
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||| ||| ||||||||||||  |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||  |||||||    
T  20862 tcaccaaaagttgaagttcatcaagagatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcagaagactagaagag 20961  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    ||||||||| |  | ||  |||||| ||||||||||||||||||| ||| |  | |||||| ||  ||| ||| ||||||||| ||||||||||||||||    
T  20962 tgaagcaacggtcattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatct 21061  T
Q  200 c 200  Q
    |    
T  21062 c 21062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25866 - 26066
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||| ||||||| |||||  || |||||||| |||||||||||||||  |||| |||| || |||| ||||||| ||||   ||| ||    
T  25866 tcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaagcattgcaaaagactggaaaag 25965  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||||||| |||| ||| ||||| | || ||| ||||| ||| ||||||||||||||||    
T  25966 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagggttgacatagtacaattgtatgaagtgtacaaccactatct 26065  T
Q  200 c 200  Q
    |    
T  26066 c 26066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 44693 - 44758
Alignment:
Q  98 agtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttga 163  Q
    |||||||||||  ||| ||  |||||| ||||||||||| ||||||||||| |||| |||||||||    
T  44693 agtgaagcaacgtctattttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttga 44758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 27320 - 27516
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    |||||||| ||||||||||||||| |||||  || ||||||||||||||||||||||||   ||| |||| || |||| |||||||||||| ||| ||||    
T  27320 tcaccagatgctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactga-aaga 27418  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||| |||| ||  | |||| | |||||||||||||||||| || |  | ||||||||| |||| ||  ||||||||| |||||||||||||    
T  27419 gtgaagcaacagctattttgataggattcgaaggcattggatgcttgctcttcaaagagcgttgacaaagtaccattgtacgaagtgtacaaccacta 27516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 19363 - 19560
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    |||||||||| || ||||||| || |||||  || |||||||||||||| |||||||||  |||| |||  ||||||| | ||||||||||  |||||||    
T  19363 tcaccagaagttgtagttcatgaggagatgcaagacttaaagcttcaaaagttgttcaatggatttaatttcgcctaagaattgcagaagactagaagag 19462  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactat 197  Q
    |||||||||  ||| ||  |||||| || || ||||||||||||||||| |||| ||||||||| | |  ||| ||||||||| ||||||||||||||    
T  19463 tgaagcaacaactattttgaaaggatttaaaagcattggatgcttgttctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactat 19560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 29945 - 29814
Alignment:
Q  68 atcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaa 167  Q
    |||||||||| ||||||||||||  |||||  || ||||||  |||||||| | | | | ||||||||||||||||| ||| |||  || ||||  ||||    
T  29945 atcacgcctatcattgcagaagaatagaagcctggagcaacgactaattcagatgaattggaaggcattggatgcttattctttggagaacgttcgaaaa 29846  T
Q  168 ggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||| | |||| || || ||||||||||||||    
T  29845 ggacaatagtac-aagtggacaaccactatctc 29814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 212571 - 212378
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaa 103  Q
    |||||||| || |||||||| ||||   || |||||||||||||||| | ||| |  |||| |||| || |||| ||||||||||||  |||||||||||    
T  212571 cagaagctaaacttcatcaggagatccaagacttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaa 212472  T
Q  104 gcaactgctaattc-aaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||  ||| ||  ||||||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||    
T  212471 gcaacaactatttttaaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 212378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 6092 - 6250
Alignment:
Q  4 ccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtga 102  Q
    ||||||| || | |||||||| |||||  || |||||||||||||||| ||||||| ||||| |||| || |||| ||||||||||||   |||||||||    
T  6092 ccagaagttgtaattcatcaggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtga 6191  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgtt 161  Q
    ||||||  ||| ||  |||||| ||||| ||||||||||||||||| |||| |||||||    
T  6192 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgtt 6250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12429 - 12229
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  |||||||||| |||    || |||||||||||||||| |||||||   ||| |||| || |||| ||||||||||||   ||||||    
T  12429 tcaccagaagctctagttcatcaggagacacaagacttaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgcagaagactggaagag 12330  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |||||||||  ||| ||  |||| | ||||| ||||||||||||| ||| |||| ||||||||| |||| ||| ||||||||| ||||||||||||||||    
T  12329 tgaagcaacaactattttgaaagaatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 12230  T
Q  200 c 200  Q
    |    
T  12229 c 12229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 4838 - 5034
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaaga-tgagaaga 98  Q
    ||||||||||||  ||||||||||||||||  || |||||||||||||||| |||||||  |||| |||| || |||| ||||| |||||| ||| ||||    
T  4838 tcaccagaagctctagttcatcagaagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgtagaagactga-aaga 4936  T
Q  99 gtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||| ||  ||| ||  |||||| |||||||||||||||| |||||| ||   ||||||||| |||| ||| ||||| ||| |||||||||||||    
T  4937 gtgaagcgacgactattttgaaaggatttgaaggcattggatgtttgttctttatagagcgttgacaaagtacaattgtatgaagtgtacaaccacta 5034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22896 - 22700
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||| |||| |||||||||| |||||  || ||||||||||||||||||||||||  |||| |||| || |||| ||||||||||||   ||| ||    
T  22896 tcaccagaggctgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaag 22797  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||||  ||| ||  |||||| ||||||||||||||||||| ||| |  | ||| ||||| |||| ||| ||||| |||  ||||||||||||    
T  22796 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagtgttgacaaagtacaattgtatgaagcgtacaaccacta 22700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 10189 - 9993
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||| ||||| ||||||||||||| |||||  || |||||||||||||||| | |||||  |||| |||| || |||| | ||||||||||  |||||||    
T  10189 tcacaagaagttgaagttcatcaggagatgcaagacttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactagaagag 10090  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||| |||  ||| ||  |||||| ||||| |||||||||||||  || |||| ||||||| | |||| ||| |||||| || |||||||||||||    
T  10089 tgaagtaacgactattttgaaaggatttgaaagcattggatgcttactctttgaagagcgttcacaaagtacaattgtacaaagtgtacaaccacta 9993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 5834 - 5651
Alignment:
Q  12 tgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgc 111  Q
    ||||| |||||||||| ||| ||  || |||||||||||| |||||||| | || ||||| ||||| |||| |||||||  |||||| |||||||||  |    
T  5834 tgaagatcatcagaagctgaaagaattgaagcttcaaaggctgttcaaatgttttaatcatgcctatcattccagaagactagaagaatgaagcaacgac 5735  T
Q  112 taattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    || |||||| | | ||||||||||||||||||| ||| |||  || ||||| ||||  ||| ||||||||| |||||||||||||    
T  5734 tatttcaaatgaatttgaaggcattggatgcttattctttggagaacgttggaaaa-tacaattgtacgaagtgtacaaccacta 5651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 215468 - 215584
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||  |||| ||||||||||| |||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| || |||||||    
T  215468 attgcagaagactagaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtac 215567  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  215568 gaagtgtacaaccacta 215584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 103791 - 103596
Alignment:
Q  2 caccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagt 100  Q
    ||||||||||||||||||||||| |||||  || |||||||||| |||||||||| ||   ||| |||   | |||| ||||||||||||   |||||||    
T  103791 caccagaagctgaagttcatcaggagatgcaagacttaaagcttgaaaggttgttaaatgaatttaattttgtctaaacattgcagaagactggaagagt 103692  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||||| |||| ||  ||| ||  | |||||||||||||||||||| |  | ||||||||| |||| ||| ||||||||| ||| |||||||||    
T  103691 gaagcaacggctattttgaaatgatattaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtgcaaccacta 103596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 13712 - 13591
Alignment:
Q  79 cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgta 178  Q
    |||||||||||||  ||| |||||||||||  ||| ||  |||||| |||||||||||||||| |||||| |||| ||||||||| | || ||| |||||    
T  13712 cattgcagaagattggaatagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttctttgaagagcgttgacatagtacaattgta 13613  T
Q  179 cgaattgtacaaccactatctc 200  Q
    | || |||||||||||||||||    
T  13612 caaagtgtacaaccactatctc 13591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 74787 - 74600
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagt 100  Q
    |||||||||||||||  |||||||||| || |||  |||||||||||||||||||||||| |||| ||||||||||| |||||             || |    
T  74787 tcaccagaagctgaacatcatcagaagctgtgagaattaaagcttcaaaggttgttcaaaggatttaatcacgcctagcattg-------------gatt 74701  T
Q  101 gaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
     || |||| ||||||||||||||| ||||||| ||| |||||||| || ||||  ||| |||| |||| ||| ||||| ||| ||||||||||||| |||    
T  74700 taatcaacggctaattcaaaaggatttgaaggaattagatgcttgctctttgaaaagcattgacaaagtacaattgtatgaagtgtacaaccactacctc 74601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 89948 - 90138
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaac-attgcagaagatgagaagag 99  Q
    ||||||||||||| |||||||||| |||||  |  ||||||||||||||||||| ||||   ||| |||| || ||||  ||| |||||||   ||||||    
T  89948 tcaccagaagctgcagttcatcaggagatgcaa--cttaaagcttcaaaggttgatcaatgtatttaatctcgtctaagtattacagaagactggaagag 90045  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaacc 192  Q
    |||| |||| |||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||  |||  |||||||| |||||||||    
T  90046 tgaaccaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaaatacaagtgtacgaagtgtacaacc 90138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 790 - 720
Alignment:
Q  129 aaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||||||||| ||| |||| |||||||  ||||||||| | |||| ||||||||||||| ||||||    
T  790 aaggcattggatgcttattctttgaagagcgttcgaaaaggacaatagtac-aattgtacaaccattatctc 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 78337 - 78453
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||||||||||| ||| || | ||||||||| |||| || |||||||    
T  78337 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattctttaaagagcgttgacaaagtacgtttgtac 78436  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  78437 gaagtgtacaaccacta 78453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 16011 - 15812
Alignment:
Q  5 cagaagctgaagttcatcagaagatgagaggcttaaagcttcaaagg-ttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagagtga 102  Q
    |||||||| ||||||||||| |||||  || |||||||||||||| | ||||||||  |||| |||| || | || | ||||| ||||  ||| ||||||    
T  16011 cagaagctaaagttcatcaggagatgcaagacttaaagcttcaaaagattgttcaatggattcaatctcgtccaagaattgcaaaagaccagaggagtga 15912  T
Q  103 agcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggac-atttgtacgaattgtacaaccactatctct 201  Q
    |||| |   || ||  |||||| ||||||||||||||||||||||| |||| ||||||||| | || || | ||||||||| ||||||||||| ||||||    
T  15911 agcaccaattattttgaaaggacttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaaattgtacgaagtgtacaaccaccatctct 15812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 19216 - 19055
Alignment:
Q  36 cttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggca 134  Q
    |||||||||| ||||| |||||||  |||| |||| || | || ||||||||||||   ||||||||||||||| |||| ||   ||||| || ||||||    
T  19216 cttaaagcttgaaaggctgttcaatggatttaatctcgtcaaagcattgcagaagactggaagagtgaagcaacggctattttggaaggatttaaaggca 19117  T
Q  135 ttggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    || ||||||||||| |  | |||||||| ||||| |||  |||||||| |||||||||||||    
T  19116 tttgatgcttgttcttcaaagagcgttggaaaagtacaagtgtacgaagtgtacaaccacta 19055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 22150 - 22222
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | ||||||||| | |  || |||||||||| |||||||||||||||||    
T  22150 gaaggcattggatgcttattcttcaatgagcgttgacataatacgtttgtacgaagtgtacaaccactatctc 22222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 626 - 742
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||||||||||||||||| |  | ||||||||| |||| || |||||||    
T  626 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtac 725  T
Q  180 gaattgtacaaccacta 196  Q
     || |||||||||||||    
T  726 taagtgtacaaccacta 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1658 - 1745
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaaga 90  Q
    ||||||||||||  |||||||||| |||||  |  |||||||||||||| ||||||  || |||| || | |||||||||||||||||||    
T  1658 tcaccagaagctacagttcatcaggagatgcaa--cttaaagcttcaaaagttgtttcaaggattcaaactcgcctaacattgcagaaga 1745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7923 - 7727
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    ||||||||||||  | |||||||| |||||  || |||||||||||||||| |||||||  |||| |||| || |||| ||||||| ||||   ||||||    
T  7923 tcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcaaaagactggaagag 7824  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| ||  ||| ||   ||||| || ||||||||| ||| || ||| |  | ||||||||| |||| ||| ||||||||| |||||||||||||    
T  7823 tgaagccacgactattttggaaggatttaaaggcattgtatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 7727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 677 - 830
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||| ||||||||||| |||||  || |||||| ||||||||  |||||||   ||| |||| || |||| ||||||||||||   ||| ||    
T  677 tcaccagaagctaaagttcatcaggagatgcaagacttaaaacttcaaagactgttcaatgaatttaatctcgtctaagcattgcagaagactggaatag 776  T
Q  100 tgaagcaactg-ctaattcaaaaggaattgaaggcattggatgcttgttccttga 153  Q
    |||||| |||| ||| ||  |||||| ||||||||||||||||||||||| ||||    
T  777 tgaagc-actgactattttgaaaggatttgaaggcattggatgcttgttctttga 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 10015 - 9825
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaa-cattgcagaagatgagaagag 99  Q
    |||||||||||||||||||||| | |||||  ||  |||||||||||| | ||||| ||  |||| |||| || |||| ||||  ||||||  | |||||    
T  10015 tcaccagaagctgaagttcatctggagatgcaagatttaaagcttcaaggtttgtttaatggatttaatctcgtctaagcattatagaagaccaaaagag 9916  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaa 190  Q
    ||||| |||  ||| ||  |||||| ||||| ||||||||||||||| | |||| ||||||||| | || ||| |||||| || |||||||    
T  9915 tgaagtaacgactattttgaaaggacttgaaagcattggatgcttgtgctttgaagagcgttgacatagtacaattgtacaaagtgtacaa 9825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 1410 - 1337
Alignment:
Q  127 tgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||| ||||||| ||  |||| |||||||||||||  ||| ||||||||| |||||||||||||||||    
T  1410 tgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctc 1337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 1 - 74
Alignment:
Q  127 tgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||||| ||||||| ||  |||| |||||||||||||  ||| ||||||||| |||||||||||||||||    
T  1 tgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctc 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 2027 - 2086
Alignment:
Q  141 gcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    |||||||| |||| ||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  2027 gcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 31715 - 31871
Alignment:
Q  40 aagcttcaaaggttgttcaaaagattaaatcacgcctaacattgcagaagatgagaagagtgaagcaactgctaattcaaaaggaatt--gaaggcattg 137  Q
    |||||| ||| |||||||||| | || ||||||||||| |||||||||||   |||||  ||| ||||| |||||||| | |||||||  ||| ||||||    
T  31715 aagctttaaatgttgttcaaatgttttaatcacgcctatcattgcagaagtatagaagcctgatgcaacggctaattc-agaggaatttggaaagcattg 31813  T
Q  138 gatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||| ||| |||  || ||||| ||||||||| | |||| || |||||||||||||    
T  31814 gatgcttattctttggagaacgttggaaaaggacaatagtac-aagtgtacaaccacta 31871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 6757 - 6827
Alignment:
Q  126 ttgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    ||||||||||||||||||||||| |  | |||| |||| |||| || |||||||||| |||||||||||||    
T  6757 ttgaaggcattggatgcttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccacta 6827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 61021 - 60823
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaaggttgttcaaaagattaaatcacgcctaaca-ttgcagaagatgagaagag 99  Q
    |||||||||| || |||||||||| |||||  |  |||||| ||||||| |||||| ||| |||| || | || |||| | ||||||||||   ||| ||    
T  61021 tcaccagaagttgtagttcatcaggagatgcaa--cttaaaacttcaaaagttgtttaaaggatttaaactcgtctaaaaattgcagaagactggaaaag 60924  T
Q  100 tgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatct 199  Q
    |  |||||| |||| ||   ||||| | |||||||||| |||||||||| |  | ||||||||| | || || |||||||||| ||||||||||||||||    
T  60923 tatagcaacggctattttggaaggattggaaggcattgaatgcttgttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 60824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 1670 - 1786
Alignment:
Q  80 attgcagaagatgagaagagtgaagcaactgctaattcaaaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtac 179  Q
    |||||||||||   ||| |||||||||||  ||| ||  |||||| ||||||||| |||||| |||||| |  | ||||||||| |||| || ||| |||    
T  1670 attgcagaagacttgaaaagtgaagcaacgactattttgaaaggatttgaaggcactggatgattgttcttcaaagagcgttgacaaagtacgtttttac 1769  T
Q  180 gaattgtacaaccacta 196  Q
    ||| |||||||||||||    
T  1770 gaagtgtacaaccacta 1786  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 9247 - 9175
Alignment:
Q  128 gaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 200  Q
    ||||||||||||||||| ||| |  | ||||||||| | || || |||||||||| |||||||||||||||||    
T  9247 gaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 9175  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 5612 - 5689
Alignment:
Q  119 aaaggaattgaaggcattggatgcttgttccttgacgagcgttgaaaaaggacatttgtacgaattgtacaaccacta 196  Q
    |||||| ||||||||||| ||||||| ||| |  | ||||||||| |||| |||||| || ||| |||||||||||||    
T  5612 aaaggatttgaaggcatttgatgcttattcttcaaagagcgttgacaaagtacatttatatgaagtgtacaaccacta 5689  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5830 - 5878
Alignment:
Q  1 tcaccagaagctgaagttcatcagaagatgagaggcttaaagcttcaaa 49  Q
    ||||||||||||||||||||| || |||||  || ||||||||||||||    
T  5830 tcaccagaagctgaagttcattaggagatgcaagacttaaagcttcaaa 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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