View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12600_low_31 (Length: 291)

Name: NF12600_low_31
Description: NF12600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12600_low_31
NF12600_low_31
[»] chr3 (17 HSPs)
chr3 (17-282)||(46104120-46104390)
chr3 (16-63)||(40477385-40477432)
chr3 (18-64)||(15782215-15782261)
chr3 (1-63)||(46027413-46027475)
chr3 (16-61)||(22508738-22508783)
chr3 (16-63)||(44507810-44507857)
chr3 (1-63)||(20489354-20489416)
chr3 (1-63)||(39820600-39820662)
chr3 (16-66)||(45267303-45267353)
chr3 (1-63)||(47433805-47433867)
chr3 (129-182)||(9738801-9738854)
chr3 (16-63)||(52708628-52708675)
chr3 (16-63)||(54437478-54437525)
chr3 (17-63)||(53121303-53121349)
chr3 (1-62)||(39819314-39819375)
chr3 (23-63)||(40476222-40476262)
chr3 (23-63)||(46026077-46026117)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-66)||(1858-1923)
[»] chr5 (7 HSPs)
chr5 (1-63)||(27571125-27571187)
chr5 (1-63)||(34911824-34911886)
chr5 (2-63)||(3936579-3936640)
chr5 (5-62)||(25254131-25254188)
chr5 (5-62)||(25317921-25317978)
chr5 (14-63)||(35604420-35604469)
chr5 (16-63)||(31540497-31540544)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-63)||(120981-121043)
scaffold0001 (16-63)||(119594-119641)
[»] chr7 (16 HSPs)
chr7 (1-63)||(5611503-5611565)
chr7 (1-63)||(24197099-24197161)
chr7 (16-65)||(31489946-31489995)
chr7 (3-63)||(42255900-42255959)
chr7 (16-63)||(554246-554293)
chr7 (1-63)||(24195608-24195670)
chr7 (1-63)||(35212069-35212131)
chr7 (1-61)||(11217067-11217127)
chr7 (1-61)||(12385703-12385763)
chr7 (1-63)||(12933420-12933482)
chr7 (1-59)||(25037755-25037813)
chr7 (33-63)||(35104079-35104109)
chr7 (1-63)||(41694951-41695013)
chr7 (16-65)||(30512044-30512093)
chr7 (16-61)||(32544785-32544830)
chr7 (1-45)||(43066020-43066064)
[»] chr2 (9 HSPs)
chr2 (1-63)||(1777470-1777532)
chr2 (5-60)||(588538-588593)
chr2 (1-63)||(25282408-25282470)
chr2 (1-61)||(36837774-36837834)
chr2 (4-63)||(25283271-25283330)
chr2 (17-63)||(2412440-2412486)
chr2 (1-63)||(25979247-25979309)
chr2 (16-61)||(12067000-12067045)
chr2 (10-51)||(29794322-29794363)
[»] chr1 (16 HSPs)
chr1 (1-63)||(13074570-13074632)
chr1 (1-63)||(27264212-27264274)
chr1 (16-61)||(9774040-9774085)
chr1 (1-63)||(9774884-9774946)
chr1 (1-63)||(27262909-27262971)
chr1 (1-63)||(35721102-35721164)
chr1 (3-63)||(24611115-24611175)
chr1 (4-63)||(23469968-23470027)
chr1 (16-63)||(37396851-37396898)
chr1 (16-63)||(45979507-45979554)
chr1 (16-63)||(50164404-50164451)
chr1 (33-63)||(16026574-16026604)
chr1 (17-63)||(20723700-20723746)
chr1 (17-63)||(24427381-24427427)
chr1 (1-63)||(46075046-46075108)
chr1 (10-63)||(48334137-48334190)
[»] scaffold0516 (1 HSPs)
scaffold0516 (4-63)||(1134-1193)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-63)||(427-489)
[»] chr8 (12 HSPs)
chr8 (16-62)||(3483635-3483681)
chr8 (1-63)||(10717122-10717184)
chr8 (1-63)||(28996835-28996897)
chr8 (1-63)||(28997989-28998051)
chr8 (1-63)||(36588223-36588285)
chr8 (16-63)||(10718459-10718506)
chr8 (16-63)||(39439925-39439972)
chr8 (1-63)||(30124219-30124281)
chr8 (1-66)||(4182620-4182685)
chr8 (14-63)||(10292817-10292866)
chr8 (23-63)||(1420460-1420500)
chr8 (3-63)||(22534720-22534780)
[»] chr6 (9 HSPs)
chr6 (1-63)||(17517305-17517367)
chr6 (1-63)||(18810533-18810595)
chr6 (1-63)||(34995115-34995177)
chr6 (1-61)||(3279495-3279555)
chr6 (16-63)||(21165247-21165294)
chr6 (1-63)||(16995452-16995514)
chr6 (12-62)||(25439650-25439700)
chr6 (1-63)||(34998137-34998199)
chr6 (17-62)||(20895960-20896005)
[»] chr4 (13 HSPs)
chr4 (1-63)||(42358033-42358095)
chr4 (16-61)||(41935081-41935126)
chr4 (23-63)||(19675638-19675678)
chr4 (16-63)||(19674415-19674462)
chr4 (16-63)||(41933819-41933866)
chr4 (1-63)||(3880492-3880554)
chr4 (16-62)||(16916069-16916115)
chr4 (17-63)||(22204056-22204102)
chr4 (1-63)||(32699310-32699372)
chr4 (1-63)||(42359342-42359404)
chr4 (1-51)||(45618298-45618348)
chr4 (19-63)||(29059714-29059758)
chr4 (17-61)||(38167785-38167829)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-63)||(202580-202620)
[»] scaffold0517 (1 HSPs)
scaffold0517 (16-63)||(10316-10363)
[»] scaffold0002 (3 HSPs)
scaffold0002 (16-63)||(374336-374383)
scaffold0002 (1-59)||(344942-345000)
scaffold0002 (17-63)||(376381-376427)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-63)||(29730-29792)
scaffold0106 (1-63)||(30903-30965)


Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 282
Target Start/End: Complemental strand, 46104390 - 46104120
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc--tttcctcg--cttgtgagactgtggtaatctttgaaccaagttatgttagc 112  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||  || | ||   |||||||||||||||||||||||||||||||||||||||||    
T  46104390 aaaactcaaactcgctatatttgcagggaccaaaatcatattttagcccttgcttctgccttgtgagactgtggtaatctttgaaccaagttatgttagc 46104291  T
Q  113 ttta-tatattcgccacgcctacctctaagacacatatcaatgctgtaacaaccttcctacttgaaaattgccgcaatgatattgtactttacctccacc 211  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46104290 tttaatatatccgcgacgcctacctctaagacacatatcaatgccgtagcaaccttcctccttgaaaattgccgcaatgatattgtactttacctccacc 46104191  T
Q  212 ctttctggtttcatcaatctactttgttcttggggaaaagatccgttgttgttcaacttttcttctctgct 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  46104190 ctttctggtttcatcaatctactttgttcttggggaaaagacccgttgttgttcaacttttcttctttgct 46104120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 40477385 - 40477432
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40477385 caaaacccaaactcgttatatttgcagggaccaaaatcatattttagc 40477432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 15782261 - 15782215
Alignment:
Q  18 aaactcaaactcgttatatttgcagggaccaaaattatattttagct 64  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  15782261 aaactcaaactcgctatatttgcagggaccaaaaatatattttagct 15782215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 46027413 - 46027475
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | ||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  46027413 ttttttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttagc 46027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 22508783 - 22508738
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  22508783 caaaactcaaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 44507810 - 44507857
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  44507810 caaaattcaaactcgctatatttgcagggaccaaaatcatattttagc 44507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20489354 - 20489416
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| ||||||||| |||||||||||||||||||  ||||||||||    
T  20489354 ttttttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39820600 - 39820662
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  39820600 ttttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttagc 39820662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 45267353 - 45267303
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagcttt 66  Q
    ||||||||||||||| |||||||||||||| |||||  |||||||||||||    
T  45267353 caaaactcaaactcgctatatttgcagggatcaaaaacatattttagcttt 45267303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 47433805 - 47433867
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  47433805 ttttttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttagc 47433867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 9738801 - 9738854
Alignment:
Q  129 gcctacctctaagacacatatcaatgctgtaacaaccttcctacttgaaaattg 182  Q
    |||| ||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  9738801 gccttcctctaagacacataccaatgccataacaaccttcctccttgaaaattg 9738854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 52708628 - 52708675
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  52708628 caaaacccaaactcgctatatttgcagggaccaaaagcatattttagc 52708675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 54437478 - 54437525
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  54437478 caaaactcaaattcgctatatttgcagggaccaaaaacatattttagc 54437525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 53121349 - 53121303
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  53121349 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 53121303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39819375 - 39819314
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    |||||||| ||| | ||||| ||||||||| ||||||||||||||| ||||  |||||||||    
T  39819375 ttttttaccagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 40476262 - 40476222
Alignment:
Q  23 caaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  40476262 caaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 46026117 - 46026077
Alignment:
Q  23 caaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  46026117 caaactcgctatatttgcagggaccaaaaacatattttagc 46026077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1923 - 1858
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagcttt 66  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  1923 ttttttactagggatcaaaactcaaactcgctatatttgcagggaccaaaatcatattttaccttt 1858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27571125 - 27571187
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  27571125 ttttttaccagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagc 27571187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34911824 - 34911886
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| |||||||  |||||||| ||||||||||||||||||||| ||||||||||    
T  34911824 ttttttactagggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttagc 34911886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 3936640 - 3936579
Alignment:
Q  2 tttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  3936640 tttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 3936579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 25254131 - 25254188
Alignment:
Q  5 ttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    |||| ||| ||||||||||||||||  ||||||||||||||||||||  |||||||||    
T  25254131 ttaccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 25317921 - 25317978
Alignment:
Q  5 ttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    |||| ||| ||||||||||||||||  ||||||||||||||||||||  |||||||||    
T  25317921 ttaccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 35604469 - 35604420
Alignment:
Q  14 atcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||||||||||||||||||  |||||||  ||||||||||    
T  35604469 atcaaaactcaaactcgttatatttgcagaaaccaaaaacatattttagc 35604420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 31540544 - 31540497
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||||    
T  31540544 caaaacccaaattcgttatatttgcagggaccaaaaacatattttagc 31540497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 120981 - 121043
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||||||||||||||||||||||||  ||||||||||    
T  120981 ttttttaccagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttagc 121043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 119641 - 119594
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  119641 caaaactcaaattcgctatatttgcagggaccaaaagcatattttagc 119594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5611503 - 5611565
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||| |  ||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  5611503 ttttttacgagggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttagc 5611565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24197099 - 24197161
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||| ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  24197099 ttttttaccaggaaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagc 24197161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 31489946 - 31489995
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagctt 65  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  31489946 caaaacccaaactcgttatatttgcagggaccaaaaacatattttagctt 31489995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 42255900 - 42255959
Alignment:
Q  3 ttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| ||| | |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  42255900 ttttaccagggaccaaaactcaaactcgtcatatttgcagggacc-aaattatattttagc 42255959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 554293 - 554246
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||| |||||||||||||||||| |||||||||||||    
T  554293 caaaacccaaactcgctatatttgcagggaccaatattatattttagc 554246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24195670 - 24195608
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  24195670 ttttttaccagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 24195608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35212131 - 35212069
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| ||||||||| |||||||||||||||||||  ||||||||||    
T  35212131 ttttttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 35212069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11217067 - 11217127
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    |||||||| ||| | ||||| ||||||||| ||||||||||||||||||||  ||||||||    
T  11217067 ttttttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12385703 - 12385763
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    |||||||| ||| | |||||  |||||||| ||||||||||||||||||||| ||||||||    
T  12385703 ttttttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12933482 - 12933420
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | ||||| ||||||||  ||||||||||||||||||||  ||||||||||    
T  12933482 ttttttaccagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagc 12933420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25037813 - 25037755
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattt 59  Q
    |||||||| ||| | ||||| |||||||||| |||||||||||||| ||||| ||||||    
T  25037813 ttttttaccagggaccaaaattcaaactcgtcatatttgcagggactaaaatcatattt 25037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 35104109 - 35104079
Alignment:
Q  33 atatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||||||||||||||||||||    
T  35104109 atatttgcagggaccaaaattatattttagc 35104079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41694951 - 41695013
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | ||||||||||||||| ||||||||||||||  ||||  ||||||||||    
T  41694951 ttttttaccagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttagc 41695013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 30512093 - 30512044
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagctt 65  Q
    ||||||||||| ||| |||||||||| ||| ||||| |||||||||||||    
T  30512093 caaaactcaaattcgctatatttgcaaggaacaaaaatatattttagctt 30512044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 32544785 - 32544830
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    |||||| |||| ||| ||||||||||||||||||||| ||||||||    
T  32544785 caaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43066064 - 43066020
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcaggga 45  Q
    |||||||| | ||| ||||||||||||||| ||||||||||||||    
T  43066064 ttttttaccaagaaccaaaactcaaactcgctatatttgcaggga 43066020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1777532 - 1777470
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | ||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  1777532 ttttttaccagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagc 1777470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 588538 - 588593
Alignment:
Q  5 ttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatatttt 60  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||  |||||||    
T  588538 ttactagggatcaaaactcaaactcgttatatttgcagggacaaaaaacatatttt 588593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25282470 - 25282408
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||| |||||||||||||||  |||||| ||||||||||||  ||||||||||    
T  25282470 ttttttactaggaaccaaaactcaaactcgacatatttacagggaccaaaaacatattttagc 25282408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36837774 - 36837834
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    |||||||| ||| | |||||| |||||||| ||||||||||| |||||||| |||||||||    
T  36837774 ttttttaccagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 25283271 - 25283330
Alignment:
Q  4 tttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| ||| ||||||||||||| ||| ||||||||||| ||||||||  ||||||||||    
T  25283271 tttaccagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttagc 25283330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 2412440 - 2412486
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  2412440 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 2412486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25979247 - 25979309
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||| ||| ||||||||||||||||||||  ||||||||||    
T  25979247 ttttttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagc 25979309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 12067045 - 12067000
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    ||||||||||| |||||||||||| |||||||||||  ||||||||    
T  12067045 caaaactcaaattcgttatatttgtagggaccaaaaacatatttta 12067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 29794322 - 29794363
Alignment:
Q  10 aggaatcaaaactcaaactcgttatatttgcagggaccaaaa 51  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||    
T  29794322 aggaaccaaaactcaaattcgctatatttgcagggaccaaaa 29794363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13074570 - 13074632
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  13074570 ttttttaccagggaccaaaactcaaactcgtcatatttgcaggaaccaaaaatatattttagc 13074632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27264212 - 27264274
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  27264212 ttttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttagc 27264274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 9774085 - 9774040
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  9774085 caaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9774884 - 9774946
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  9774884 ttttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagc 9774946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27262971 - 27262909
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  27262971 ttttttaccagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttagc 27262909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35721164 - 35721102
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||| ||||||||||||||||||||||||  ||||||||||    
T  35721164 ttttttaccagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagc 35721102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 24611115 - 24611175
Alignment:
Q  3 ttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| ||| | |||||||||||||||| |||||| ||||||||||||  ||||||||||    
T  24611115 ttttaccagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttagc 24611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23469968 - 23470027
Alignment:
Q  4 tttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| ||| ||||||||  ||||||| ||||||||||||||||||||  ||||||||||    
T  23469968 tttaccagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttagc 23470027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 37396851 - 37396898
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  37396851 caaaactcaaattcgctatatttgcagggaccaaaagcatattttagc 37396898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 45979507 - 45979554
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  45979507 caaaactcaaattcgctatatttgcagggaccaaaaacatattttagc 45979554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 50164451 - 50164404
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||||  |||||||||||||||||||  ||||||||||    
T  50164451 caaaactcaaactcgccatatttgcagggaccaaaagcatattttagc 50164404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 16026604 - 16026574
Alignment:
Q  33 atatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||||||||||||||||||||    
T  16026604 atatttgcagggaccaaaattatattttagc 16026574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 20723700 - 20723746
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  20723700 aaaactcaaattcgctatatttgcagggaccaaaaacatattttagc 20723746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 24427381 - 24427427
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||    
T  24427381 aaaactcaaactcgctatatttgtagggaccaaaaacatattttagc 24427427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 46075046 - 46075108
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| |||||||||||||| |||||  ||||||||||    
T  46075046 ttttttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttagc 46075108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 48334137 - 48334190
Alignment:
Q  10 aggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| ||||||||||| ||| |||||||| |||||||||||  ||||||||||    
T  48334137 aggaaccaaaactcaaattcgctatatttgtagggaccaaaagcatattttagc 48334190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 1134 - 1193
Alignment:
Q  4 tttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||| | |||||||||||||||  |||||||||| |||||||| |||||||||||    
T  1134 tttacgagggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttagc 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 427 - 489
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||  ||||||||||||||||||||| ||||||||||    
T  427 ttttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 3483681 - 3483635
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||||    
T  3483681 caaaactcaaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10717184 - 10717122
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  10717184 ttttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagc 10717122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28996897 - 28996835
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||  ||||||||||||||||||||| ||||||||||    
T  28996897 ttttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 28996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28997989 - 28998051
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  28997989 ttttttactagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 28998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36588285 - 36588223
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  36588285 ttttttaccagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttagc 36588223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 10718459 - 10718506
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  10718459 caaaacccaaactcgctatatttgcagggaccaaaagcatattttagc 10718506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 39439972 - 39439925
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||||| |  |||||||||||||||||||| ||||||||||    
T  39439972 caaaactcaaactagccatatttgcagggaccaaaatcatattttagc 39439925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30124219 - 30124281
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | ||||||||||||| | | ||||||||||||||||||  ||||||||||    
T  30124219 ttttttaccagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttagc 30124281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4182685 - 4182620
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagcttt 66  Q
    |||||||| ||| | |||||| |||| ||| ||||||| ||||||||||||  |||||||||||||    
T  4182685 ttttttaccagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttagcttt 4182620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 10292866 - 10292817
Alignment:
Q  14 atcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| |||| ||| |||||||| |||||||||||| ||||||||||    
T  10292866 atcaaaacgcaaattcgctatatttgaagggaccaaaatcatattttagc 10292817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 1420460 - 1420500
Alignment:
Q  23 caaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  1420460 caaactcgctatatttgcagggaccaaaaacatattttagc 1420500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 22534720 - 22534780
Alignment:
Q  3 ttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| ||| | |||||| |||||||| |||||||||||||| |||||  ||||||||||    
T  22534720 ttttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagc 22534780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17517305 - 17517367
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||||||||||||  |||||||||||||||||||  ||||||||||    
T  17517305 ttttttaccagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttagc 17517367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18810595 - 18810533
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||  ||||||||||||||||||||| ||||||||||    
T  18810595 ttttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 18810533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34995177 - 34995115
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||||| |||||  ||||||||||    
T  34995177 ttttttaccaggaaccaaaactcaaattcgctatatttgcagggatcaaaagcatattttagc 34995115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3279495 - 3279555
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||||  ||||||||    
T  3279495 ttttttaccaggaaccaaaattcaaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 21165294 - 21165247
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  21165294 caaaacacaaactcgctatatttgcagggaccaaaagcatattttagc 21165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16995514 - 16995452
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||| || |||||||||||||||||||||  ||||||||||    
T  16995514 ttttttaccagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagc 16995452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 25439700 - 25439650
Alignment:
Q  12 gaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    |||||||||| |||| ||||||||||||||||||| ||||  |||||||||    
T  25439700 gaatcaaaacccaaaatcgttatatttgcagggactaaaaacatattttag 25439650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34998137 - 34998199
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| |||||||||||||| |||||  ||||||||||    
T  34998137 ttttttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagc 34998199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 20896005 - 20895960
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    |||||||||| ||| ||||||||||||||||||||  |||||||||    
T  20896005 aaaactcaaattcgctatatttgcagggaccaaaaacatattttag 20895960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42358095 - 42358033
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| |||||||||||||||   ||||||||||||||||||||  ||||||||||    
T  42358095 ttttttaccagggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttagc 42358033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 41935081 - 41935126
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||    
T  41935081 caaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 19675638 - 19675678
Alignment:
Q  23 caaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  19675638 caaactcgttatatttgcagggaccaaaagcatattttagc 19675678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 19674462 - 19674415
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||||||| |||||||||| |||||||||  ||||||||||    
T  19674462 caaaactcaaactcgctatatttgcaaggaccaaaagcatattttagc 19674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 41933866 - 41933819
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||| ||||||||||| ||||||||| ||||||||||    
T  41933866 caaaacccaaactcgctatatttgcagagaccaaaatcatattttagc 41933819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3880492 - 3880554
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||| |||||||||||| |||||||  ||||||||||    
T  3880492 ttttttactagggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttagc 3880554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 16916115 - 16916069
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttag 62  Q
    ||||||||||||||   ||||||||||||||||||| ||||||||||    
T  16916115 caaaactcaaactcaccatatttgcagggaccaaaagtatattttag 16916069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 22204102 - 22204056
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  22204102 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 22204056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32699310 - 32699372
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||| |||| | |||||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  32699310 ttttttatgagggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttagc 32699372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42359342 - 42359404
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||  |||||||| ||||||||||||||||||||  ||||||||||    
T  42359342 ttttttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 42359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45618348 - 45618298
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaa 51  Q
    |||||||| ||| | |||||| |||||||| ||||||||||||||||||||    
T  45618348 ttttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaa 45618298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 29059758 - 29059714
Alignment:
Q  19 aactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||    
T  29059758 aactcaaattcgttatatttgcagggacgaaaaacatattttagc 29059714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 38167785 - 38167829
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatatttta 61  Q
    ||||| |||| |||||||||||| ||||||||||| |||||||||    
T  38167785 aaaacccaaattcgttatatttgtagggaccaaaaatatatttta 38167829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 202620 - 202580
Alignment:
Q  23 caaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  202620 caaactcgttatatttgcagggaccaaaagcatattttagc 202580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 10363 - 10316
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  10363 caaaactcaaattcgctatatttgcagggaccaaaagcatattttagc 10316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 374383 - 374336
Alignment:
Q  16 caaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||| |||||||| |||||||||||||| |||||| ||||||||||    
T  374383 caaaacccaaactcgctatatttgcagggatcaaaatcatattttagc 374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 345000 - 344942
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattt 59  Q
    |||||||| ||| | |||||| ||||||||  |||||||||||||||||||| ||||||    
T  345000 ttttttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatattt 344942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 376381 - 376427
Alignment:
Q  17 aaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    ||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttagc 376427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29792 - 29730
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||  |||||||||| ||||||||||||||||||  ||||||||||    
T  29792 ttttttaccagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttagc 29730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30903 - 30965
Alignment:
Q  1 ttttttacgaggaatcaaaactcaaactcgttatatttgcagggaccaaaattatattttagc 63  Q
    |||||||| ||| | |||||| |||||||  ||||||||||||||||||||  ||||||||||    
T  30903 ttttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttagc 30965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University