View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12600_low_43 (Length: 245)
Name: NF12600_low_43
Description: NF12600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12600_low_43 |
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Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 7934706 - 7934946
Alignment:
| Q |
1 |
aaataataattggtcataagataccatttagtgactacctatgatgattatatgaattaatatttaaccaaaagttaaggccaatgttttgcatagtttg |
100 |
Q |
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| T |
7934706 |
aaataataattggtcataagataccatttagtgactacctaggatgattatatgaattaatatttaaccaaaagttaaggccaatgttttgcatagtttg |
7934805 |
T |
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| Q |
101 |
ctttgttgggaacaatgtttatctccattacaaacaaatgtttcatcattatcttatttttcattgttgtgtcttatgtacatccattatataaatgcaa |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7934806 |
ctttgttgggaacaatgtttgtctccattacaaacaaatgtttcatcattatcttatttttcattgttgtgtcttatgtacatccattatataaatgcaa |
7934905 |
T |
|
| Q |
201 |
tggcctt-gcataattgtccacactgataccctcccctttg |
240 |
Q |
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||||||| |||||||||||||||||||||||||||||||| |
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| T |
7934906 |
tggccttcacataattgtccacactgataccctcccctttg |
7934946 |
T |
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