View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12600_low_52 (Length: 208)

Name: NF12600_low_52
Description: NF12600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12600_low_52
NF12600_low_52
[»] chr3 (12 HSPs)
chr3 (1-193)||(15752475-15752668)
chr3 (10-193)||(15758268-15758452)
chr3 (8-193)||(21458331-21458514)
chr3 (9-193)||(21453158-21453340)
chr3 (11-193)||(21473104-21473287)
chr3 (1-184)||(21883414-21883598)
chr3 (1-193)||(21477482-21477674)
chr3 (11-182)||(21877164-21877336)
chr3 (1-186)||(49486707-49486893)
chr3 (1-180)||(2978225-2978404)
chr3 (11-186)||(49491204-49491380)
chr3 (11-169)||(2982181-2982338)
[»] chr1 (17 HSPs)
chr1 (8-193)||(37365127-37365313)
chr1 (1-193)||(37356709-37356902)
chr1 (11-193)||(35625228-35625411)
chr1 (1-193)||(18534957-18535148)
chr1 (11-193)||(27347143-27347326)
chr1 (1-193)||(31092925-31093116)
chr1 (11-193)||(18540683-18540864)
chr1 (11-194)||(38736039-38736223)
chr1 (1-193)||(11660167-11660358)
chr1 (11-193)||(11654020-11654201)
chr1 (11-193)||(31099531-31099712)
chr1 (1-160)||(38991089-38991244)
chr1 (1-141)||(28519265-28519405)
chr1 (11-193)||(7876091-7876271)
chr1 (11-160)||(38984912-38985057)
chr1 (9-160)||(28512810-28512955)
chr1 (11-193)||(39492740-39492921)
[»] chr4 (26 HSPs)
chr4 (1-189)||(12659171-12659360)
chr4 (1-193)||(16325694-16325887)
chr4 (11-193)||(16334738-16334921)
chr4 (1-193)||(30673677-30673868)
chr4 (11-193)||(30679770-30679951)
chr4 (11-193)||(1913709-1913892)
chr4 (1-193)||(25687536-25687727)
chr4 (10-193)||(23187962-23188144)
chr4 (9-193)||(910827-911007)
chr4 (1-193)||(1873970-1874161)
chr4 (9-193)||(18890000-18890184)
chr4 (13-193)||(25697304-25697483)
chr4 (2-193)||(23200517-23200707)
chr4 (15-189)||(12665689-12665859)
chr4 (1-160)||(12435360-12435515)
chr4 (1-160)||(42411097-42411252)
chr4 (1-160)||(29333627-29333782)
chr4 (11-160)||(42404643-42404788)
chr4 (1-193)||(12428861-12429052)
chr4 (13-193)||(12439270-12439449)
chr4 (11-160)||(917302-917447)
chr4 (11-193)||(33360159-33360341)
chr4 (8-132)||(4393790-4393915)
chr4 (11-193)||(48305320-48305499)
chr4 (11-193)||(55325479-55325663)
chr4 (1-109)||(42119796-42119905)
[»] chr2 (12 HSPs)
chr2 (1-193)||(43287369-43287562)
chr2 (2-192)||(24053266-24053456)
chr2 (11-193)||(43293114-43293297)
chr2 (9-192)||(24056601-24056784)
chr2 (1-193)||(19437515-19437706)
chr2 (5-193)||(25445037-25445224)
chr2 (11-193)||(19443090-19443271)
chr2 (11-193)||(25454699-25454876)
chr2 (11-132)||(31437151-31437273)
chr2 (11-132)||(31433045-31433167)
chr2 (59-132)||(8872289-8872362)
chr2 (50-110)||(5836153-5836213)
[»] scaffold0079 (1 HSPs)
scaffold0079 (11-193)||(57939-58122)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-193)||(111865-112058)
scaffold0014 (148-193)||(106130-106175)
[»] chr5 (11 HSPs)
chr5 (1-193)||(23053357-23053548)
chr5 (1-184)||(25365378-25365563)
chr5 (1-193)||(35264518-35264709)
chr5 (11-193)||(23058932-23059113)
chr5 (11-193)||(35270259-35270440)
chr5 (11-193)||(39653905-39654086)
chr5 (1-162)||(21171196-21171356)
chr5 (9-193)||(21178025-21178211)
chr5 (1-162)||(16675554-16675711)
chr5 (77-129)||(2135850-2135902)
chr5 (1-80)||(28367071-28367151)
[»] chr7 (10 HSPs)
chr7 (1-193)||(340269-340462)
chr7 (11-193)||(29176544-29176725)
chr7 (1-193)||(29185516-29185704)
chr7 (11-175)||(346521-346686)
chr7 (1-193)||(8248100-8248292)
chr7 (9-160)||(22822535-22822684)
chr7 (11-160)||(22826840-22826987)
chr7 (11-193)||(8242541-8242723)
chr7 (5-183)||(25830376-25830553)
chr7 (11-95)||(2068797-2068882)
[»] chr8 (12 HSPs)
chr8 (1-193)||(30714193-30714384)
chr8 (1-193)||(30721970-30722161)
chr8 (11-193)||(30727578-30727759)
chr8 (1-160)||(37209702-37209859)
chr8 (1-160)||(21247666-21247821)
chr8 (9-160)||(37204233-37204382)
chr8 (11-160)||(21241172-21241317)
chr8 (1-132)||(27679662-27679793)
chr8 (11-132)||(27683444-27683565)
chr8 (1-116)||(26196886-26197002)
chr8 (36-193)||(24042835-24042987)
chr8 (11-103)||(26196996-26197089)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-190)||(14015-14203)
[»] scaffold0591 (1 HSPs)
scaffold0591 (11-184)||(9323-9496)
[»] chr6 (4 HSPs)
chr6 (11-188)||(18738573-18738749)
chr6 (11-184)||(33660877-33661052)
chr6 (1-160)||(23427472-23427627)
chr6 (11-160)||(23421636-23421781)
[»] scaffold0258 (1 HSPs)
scaffold0258 (13-193)||(6256-6435)


Alignment Details
Target: chr3 (Bit Score: 154; Significance: 7e-82; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 15752668 - 15752475
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15752668 caagggggaatgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactct 15752569  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  15752568 attttcttataaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgctctaattctctcttcttctccttctctct 15752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 15758452 - 15758268
Alignment:
Q  10 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 108  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15758452 gtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttctta 15758353  T
Q  109 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  15758352 taaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgctctaattctctcttcttctccttctctct 15758268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 21458331 - 21458514
Alignment:
Q  8 gagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttct 106  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21458331 gagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttct 21458430  T
Q  107 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||    
T  21458431 tataaatagagctcatttgtaacattgggatacacacatcagtgaataagaatactgctcctattctc---tcttctccttctctct 21458514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 21453158 - 21453340
Alignment:
Q  9 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 107  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21453158 agtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttctt 21453257  T
Q  108 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||    
T  21453258 ataaatagagctcatttgtaacattgggatacacacatcagtgaataagaatactgctcctattctc---tcttctccttctctct 21453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 21473104 - 21473287
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  21473104 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactattagcttattggacttagttcataagctactctattttcttat 21473203  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  21473204 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 21473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 21883414 - 21883598
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21883414 caagggggagtgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatactactaggttattgggcttagttcataagctactct 21883513  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctc 184  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||| | |||||||||||| ||||||||    
T  21883514 attttcttataaatagagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctctcttcttctc 21883598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 21477482 - 21477674
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  21477482 caagggggagtgttataaatattaatagtggatgtccaaatagcaa-tgtgttattgggccatactactaggttattgggcttagttcataagctacttt 21477580  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||  || |||||||||||| |||||||||||| ||||||| |||||||||    
T  21477581 atttttttataaatagggctcatttgtaacattgagatacacacatcggtaaataagaatactgctcctattctctcttcttcttcttctctct 21477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 21877164 - 21877336
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21877164 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 21877263  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttc 182  Q
    |||| ||||||||||||||||||  ||||||||||| |||||||| ||||| | |||||||||||| ||||||    
T  21877264 aaatggagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctctcttcttc 21877336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 49486893 - 49486707
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||| ||||| |||||| ||||||||    
T  49486893 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgagcttaattcataggctactct 49486794  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctcct 186  Q
    ||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  49486793 atttctctataaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcctattctctcttcttctcct 49486707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 2978404 - 2978225
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  2978404 caagggggagtgttataaatattaatagtggatgtccaaataacaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactct 2978305  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattct 180  Q
    |||||| ||||||||||||||||||||||||||  |||| |||||| |||||||||||||| | |||| |||||||| ||||    
T  2978304 attttcctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatatttctccttattctctcttct 2978225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 49491380 - 49491204
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||| ||||| |||||| ||||||||||||   |||    
T  49491380 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgagcttaattcataggctactctatttctctat 49491281  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctcct 186  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||| ||||||||||    
T  49491280 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcatattctctcttcttctcct 49491204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 2982338 - 2982181
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  2982338 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggctatactactaggttattgggcttagttcataagctactctatttccctat 2982239  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactccta 169  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||||||| | ||||||    
T  2982238 aaatagagctcatttgtaacatt--gatatacacataagtgaataagaatatttctccta 2982181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 4e-80; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 37365313 - 37365127
Alignment:
Q  8 gagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttct 106  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37365313 gagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactatattttct 37365214  T
Q  107 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||    
T  37365213 tataaatagagctcatttgtaacattgagatacacacattattgaataagaatactgttcctattctctcttcttctccttctctct 37365127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 37356902 - 37356709
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  37356902 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactat 37356803  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||   ||||||||||| |||||||||||||||||    
T  37356802 attttcttataaatagagctcatttataacattgagatacacacattattgaataagaataccgttcctattctctcttcttctccttctctct 37356709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 35625411 - 35625228
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  35625411 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactagattattgggcttagttcataagctactatattttcttat 35625312  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  35625311 aaatagagctcatttgtaacattgagatacacacattattgaataagaatactgctcctattctctcttcttctccttctctct 35625228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 18535148 - 18534957
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  18535148 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactct 18535049  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||| ||||||||||||||||||||||||||  |||| ||| || |||||||||||||||| |||| ||| ||| |||||||||||||||||    
T  18535048 attttcctataaatagagctcatttgtaacatt--gatatacagatcagtgaataagaatactgctccgattttctcttcttctccttctctct 18534957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 27347326 - 27347143
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  27347326 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgagccatactactaggttattgggcttaattcataagctactctatttccctat 27347227  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||  ||| |||||||| |||||||||||||||||    
T  27347226 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatacatctcttattctctcttcttctccttctctct 27347143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 31093116 - 31092925
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  31093116 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactct 31093017  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  |||| | |||| ||||||||| |||||| |||||||||||| |||||||||||||||||    
T  31093016 atttccctataaatagagctcatttgtaacatt--gatatatacatcagtgaataaaaatactgctcctattctctcttcttctccttctctct 31092925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 18540864 - 18540683
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18540864 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctattttcctat 18540765  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  |||| ||| || |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  18540764 aaatagagctcatttgtaacatt--gatatacagatcagtgaataagaatactgctcctattttctcttcttctccttctctct 18540683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 38736039 - 38736223
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||| | || |||||| |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38736039 tgttataaatattaatagtggttgtccaaatagaaaatatgttattgggccatactattaggttattgggcttagttcataagctactctattttcttat 38736138  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctctg 194  Q
    |||||||| |||||||||||||| ||||||| |||| ||||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  38736139 aaatagagttcatttgtaacattcagatacatacatcagtgaataataatactgctcatattctctcttcttctccttctctctg 38736223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 11660167 - 11660358
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatcaaa-tagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || || || ||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||    
T  11660167 caagggggagtgttataaatattaatagtggatgtccaagtaacaaatgtgttagtgggccatactactatgttattgggcttaattcataagctactct 11660266  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  11660267 atttccctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcatattctctcttcttctccttctctct 11660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 11654020 - 11654201
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||| | |||    
T  11654020 tgttataaatattaatagtggatatccaaatagcaaatgtgttagtggatcatactactatgttattgggcttaattcataagctattctatttccctat 11654119  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||| ||||||||||||||  |||| |||||| | |||||||||||||| |||||||||||| |||||||||||||||||    
T  11654120 aaatagagttcatttgtaacatt--gatatacacatcaatgaataagaatactgctcctattctctcttcttctccttctctct 11654201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 31099712 - 31099531
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  31099712 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 31099613  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  |||| | |||| ||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  31099612 aaatagagctcatttgtaacatt--gatatatacatcagtgaataaaaatactgctcttattctctcttcttctccttctctct 31099531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 38991089 - 38991244
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  38991089 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactct 38991187  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | ||||||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  38991188 atttccctataaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 38991244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 28519265 - 28519405
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  28519265 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactct 28519363  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacac 141  Q
    |||| | |||||||||||||||||||||||||| ||| ||||    
T  28519364 atttccctataaatagagctcatttgtaacattgagacacac 28519405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 7876091 - 7876271
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||| | |||    
T  7876091 tgttataaatattaatagtgaatgtccaaataacaaatgtgttagtggaccatactactaggttattaggcttagttcgtaagctactatatttccctat 7876190  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||| | | | |||||||| |||||||| || |||||    
T  7876191 aaatagagctcatttgtaacattgagat--acacattagtgaataagaatatttc-cttattctctcttcttctcattttctct 7876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 38984912 - 38985057
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  38984912 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 38985010  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  38985011 aaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 38985057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 28512810 - 28512955
Alignment:
Q  9 agtgttataaatattaatagtggatatcaaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 108  Q
    ||||||||||||||||||| ||||| || || ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  28512810 agtgttataaatattaatattggatgtccaa-agcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 28512907  T
Q  109 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||| ||    ||||| |||||||||||||||    
T  28512908 taaatagagctcatttgtaacattgag----acacactagtgaataagaata 28512955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 39492740 - 39492921
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || |||||||||||  |||  ||  |||||||| ||| ||||||||||||||  |||| |||||||||||   |||    
T  39492740 tgttataaatattaatagtggatgtccaaatagcaaataggtttatgagccatactaatagattattgggcttagtctataaactactctatttctctat 39492839  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||| |  |||||||||| | | ||||  | | || |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  39492840 aaataaaattcatttgtaagagtgagat--atatatcagtgaataagaatactgctcatattctctcttcttctccttctctct 39492921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 12659360 - 12659171
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12659360 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactct 12659261  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttct 189  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||    
T  12659260 attttcttataaatagagctcatttgtaacactgagatacacacattagtgaataagaatactgctcatattctctcttcttctcattct 12659171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 16325887 - 16325694
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  16325887 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactat 16325788  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |  ||||||||||| |||||||||||||||||    
T  16325787 attttcttataaatagagctcatttgtaacattgagatacacacattattgaataagaatattgttcctattctctcttcttctccttctctct 16325694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 16334921 - 16334738
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16334921 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 16334822  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |  ||||||| ||| |||||||||||||||||    
T  16334821 aaatagagctcatttgtaacattgagatacacacattattgaataagaatattgttcctattatctcttcttctccttctctct 16334738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 30673868 - 30673677
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  30673868 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactct 30673769  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||| ||||||||||||||  |||| | ||||||||||||||||||||| ||| |||||||| | |||||||||||||||    
T  30673768 atttccctataaatagagttcatttgtaacatt--gataaatacattagtgaataagaatactgctcttattctctctccttctccttctctct 30673677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 30679951 - 30679770
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  30679951 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttccctat 30679852  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  30679851 aaatagagctcatttgtaacatt--gataaatacattagtgaataagaatactgctcttattctctcttcttctccttctctct 30679770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 1913892 - 1913709
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||| | |||    
T  1913892 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 1913793  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  1913792 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcatattctctcttcttctccgtctctct 1913709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 25687727 - 25687536
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||| |||||||||||| |||||||||||||||    
T  25687727 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagtttattgggcttaattcataagctactct 25687628  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | |||||| |||||||||||||||||||  |||| | | || |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  25687627 atttccctataaacagagctcatttgtaacatt--gatatatagatcagtgaataagaatactgctcctattttctcttcttctccttctctct 25687536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 23187962 - 23188144
Alignment:
Q  10 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 108  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| | ||    
T  23187962 gtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtggaccatactactagtttattgagcttagttcataagctactctatttcccta 23188061  T
Q  109 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||||  |||| ||| || ||||||||||||||||  ||||||||||  |||||||||||||||||    
T  23188062 taaatagagctcatttgtaacatt--gatagacagataagtgaataagaatactgttcctattctcacttcttctccttctctct 23188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 911007 - 910827
Alignment:
Q  9 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 107  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  911007 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctattttcct 910909  T
Q  108 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||||  |||||||| || |||||||||||||||| |||||||| ||  |||||||||||||||||    
T  910908 ataaatagagctcatttgtaacatt--gatacacagatcagtgaataagaatactgctcctattttc--ttcttctccttctctct 910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 1874161 - 1873970
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| || ||||||||||||| |||||| ||||||||    
T  1874161 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattatgttattgggcttaattcataggctactct 1874062  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | |||||||| ||||||||||||||||| ||||  |||||| ||||||||||||||||  |||||||||||  ||||||||||||||||    
T  1874061 atttccctataaatatagctcatttgtaacattgagat--acacatcagtgaataagaatacttttcctattctctcctcttctccttctctct 1873970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 18890000 - 18890184
Alignment:
Q  9 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 107  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||||| | |    
T  18890000 agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccct 18890099  T
Q  108 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttctccttctctct 193  Q
    ||||||||| |||||||||||||||  |||| ||||||||||||||||||||| | |||| |||||||| |||||||| ||||||||    
T  18890100 ataaatagaactcatttgtaacatt--gatatacacattagtgaataagaatatttctccttattctctcttcttctctttctctct 18890184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 25697483 - 25697304
Alignment:
Q  13 ttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataa 111  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||| |||| ||||||||||||||||||| | |||||    
T  25697483 ttataaatattaatagtggatatccaaatagcaaatgtgttagtgggccatactactagtttattggacttaattcataagctactctatttccctataa 25697384  T
Q  112 atagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||  |||| | | || |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  25697383 atagagctcatttgtaacatt--gatatatagatcagtgaataagaatactgctcctattttctcttcttctccttctctct 25697304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 23200517 - 23200707
Alignment:
Q  2 aagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactcta 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||||    
T  23200517 aagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagtttattgggcttagttcataagttactcta 23200616  T
Q  101 ttttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
     || | |||||||||| |||||||||||||||  |||| ||| || || ||||| |||||||  ||||||||||| |||||||||||||||||    
T  23200617 cttccctataaatagaactcatttgtaacatt--gatagacagatcagcgaatacgaatactgttcctattctctcttcttctccttctctct 23200707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 12665859 - 12665689
Alignment:
Q  15 ataaatattaatagtggatat----caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttata 110  Q
    ||||||||||||||||||| |    ||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12665859 ataaatattaatagtggatgttgtccaaataataaatgtgttattgggccatactactaggttattgg-cttagttcataagctactctattttcttata 12665761  T
Q  111 aatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttct 189  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  12665760 aatagagctcatttgt-------agatacacacattagtgaataagaatactgctcctattctctcttcttctccttct 12665689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 12435515 - 12435360
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  12435515 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactct 12435417  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | ||||||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  12435416 atttccctataaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 12435360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 42411097 - 42411252
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  42411097 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactct 42411195  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | ||||||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  42411196 atttccctataaatagagctcatttgtaacatt--gatacaaac--tagtgaataagaata 42411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29333627 - 29333782
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||    
T  29333627 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataacctactct 29333725  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | |||||||| |||||||||||||||||  |||||||||  |||||||||||||||    
T  29333726 atttccctataaataaagctcatttgtaacatt--gatacacac--tagtgaataagaata 29333782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 42404643 - 42404788
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  42404643 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 42404741  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  42404742 aaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 42404788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 12429052 - 12428861
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||| ||||||||||||||||||||||||||| || ||| |||||||  |||  ||| |||||||| ||||||||||||||||||||||||||||||||    
T  12429052 caaggaggagtgttataaatattaatagtggatgtccaaagagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactct 12428953  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | |||||||||| ||||||||||||| |  ||   | | ||  ||||||||||||||| |||||||||||| |||||||||||||||||    
T  12428952 atttccctataaatagaactcatttgtaacagt--gagtgagagatccgtgaataagaatactgctcctattctctcttcttctccttctctct 12428861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 12439449 - 12439270
Alignment:
Q  13 ttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataa 111  Q
    ||||||||||||||||||||| || |||||||||||  |||  ||| |||||||| |||||||||||||||||||||||||||||||||||| | |||||    
T  12439449 ttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactctatttccctataa 12439350  T
Q  112 atagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||| ||||||||||||| |  ||   | | ||  ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  12439349 atagaactcatttgtaacagt--gagtgagagatcggtgaataagaatactgctcatattctctcttcttctccttctctct 12439270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 917447 - 917302
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||| ||| | ||||||||||||| | ||||||||||||||||||||||||||| | |||    
T  917447 tgttataaatattaatattggatgtctaaatagcaaatatgttagtgggctatactactaggtt-tcgggcttagttcataagctactctatttccctat 917349  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||  |||||||||  |||||||||| ||||    
T  917348 aaatagagctcatttgtaacatt--gatacacac--tagtgaataaaaata 917302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 33360341 - 33360159
Alignment:
Q  11 tgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||| |||| || | |||||||||||||||||| | ||| |||||| || ||||||| | |||||| ||||||||||||||||||||||    
T  33360341 tgttataaatattaagagtgaatgtacaaatagcaaatgtgttagttgactatactattaagttattgagtttagtttataagctactctattttcttat 33360242  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactact-cctattctctattcttctccttctctct 193  Q
    |||||||||||||| |||||||| ||||  |  ||| ||||||||| ||| || || |||||||||| ||||||  |||||||||    
T  33360241 aaatagagctcattcgtaacattgagat--atgcataagtgaataaaaatgcttctccctattctctcttcttcaacttctctct 33360159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 4393915 - 4393790
Alignment:
Q  8 gagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttct 106  Q
    |||||||||||||||||||||||||| || ||||| |||||| ||||  |   ||||||||||| ||||| || ||| ||||||||||||| ||||| |     
T  4393915 gagtgttataaatattaatagtggatgtctaaataacaaatgggttaacgagtcatactactagattattaggtttaattcataagctactttatttccc 4393816  T
Q  107 tataaatagagctcatttgtaacatt 132  Q
    |||||||| |||||||||||||||||    
T  4393815 tataaataaagctcatttgtaacatt 4393790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 48305499 - 48305320
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||| ||||||| || |||||||||| | |||| ||| |||||| ||||| |||||| |||||||| ||| |||||||||||| | |||    
T  48305499 tgttataaatattaaaagtggatgtccaaatagcaaacgcgttaatgggccataccactagattattgagcttagtttatatgctactctatttccctat 48305400  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||| ||| |||||||||| || ||   |||| |||||||||||||| | | | |||||||| |||||||| ||||||||    
T  48305399 aaatagagttca-ttgtaacattcag-ta-gtacatcagtgaataagaatatttc-cttattctctcttcttctctttctctct 48305320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 55325479 - 55325663
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattgg---accatactactaggttattgggcttagttcataagctactctattttct 106  Q
    ||||||||||||||||| | ||| || ||||||||||||||||| |||   |  |||||| ||||||||||  |||||||||||| ||||| ||||| |     
T  55325479 tgttataaatattaataatagatgtccaaatagcaaatgtgttagtgggtcataatactattaggttattgaacttagttcataaactactttatttccc 55325578  T
Q  107 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 193  Q
    |||||||| ||||||||||| ||||| |||   | |||| ||||||||| |||||| |||  ||||||||  ||||||| ||||||||    
T  55325579 tataaataaagctcatttgttacattgaga---aaacatcagtgaataataatacttctctttattctctcatcttctcattctctct 55325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42119905 - 42119796
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    |||||| || ||||||||||||||||||||||| || ||||||||||||  ||| |||  ||||||||||| |||||| ||||| | ||||| ||||| |    
T  42119905 caagggagaatgttataaatattaatagtggatgtccaaatagcaaatggattaatgggtcatactactagattattgagcttaatccataaactacttt 42119806  T
Q  100 attttcttat 109  Q
    ||||| ||||    
T  42119805 atttttttat 42119796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 43287562 - 43287369
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43287562 caaggggaagtgttataaacattaatagtagatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactct 43287463  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  43287462 attttcttataaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgctcctattctctcttcttcttcttctctct 43287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 24053456 - 24053266
Alignment:
Q  2 aagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactcta 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24053456 aagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactcta 24053357  T
Q  101 ttttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctc 192  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  24053356 ttttcttataaatagagctcatttgtaatattgagatacatacattagtgaataagaata-tgctcctattctcttttcttctccttctctc 24053266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 43293297 - 43293114
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43293297 tgttataaacattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 43293198  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  43293197 aaatagagctcatttgtaacattgggatacacacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 43293114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 24056784 - 24056601
Alignment:
Q  9 agtgttataaatattaatagtggatatcaa-atagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 107  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24056784 agtgttataaatattaatagtggatgtccagatagcaaatgtgttattgg-ccatactactaggttattggacttagttcataagctactctattttctt 24056686  T
Q  108 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctc 192  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  24056685 ataaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgcttctattctcttttcttctccttctctc 24056601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 19437706 - 19437515
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  19437706 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactct 19437607  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  19437606 atttccctataaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctctct 19437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 5 - 193
Target Start/End: Complemental strand, 25445224 - 25445037
Alignment:
Q  5 ggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattt 103  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  25445224 ggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttaatgggccatactactaggttattgggcttaattcataagctactctattt 25445125  T
Q  104 tcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
     | ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  25445124 ccctataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaatactcctcctattctctcttcttctccttctctct 25445037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 19443271 - 19443090
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  19443271 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctattttcctat 19443172  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  19443171 aaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctctct 19443090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 25454876 - 25454699
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    |||||||||||||||||||| || || ||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||| | |||    
T  25454876 tgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatactactaggttattgagcttaattcataagctactctatttccctat 25454777  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  ||||||||||| | |||||||||||||| |||||||||    |||||||||||||||||    
T  25454776 aaatagagctcatttgtaacatt--gatacacacatcattgaataagaatactgctcctattc----ttcttctccttctctct 25454699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31437151 - 31437273
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||| | |||||| |||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||| |||    
T  31437151 tgttataaatattaatagtggatgtccaaacaacaaatgagttaatggaccataatactgtgttattgggcttagttcataagctactctattttcctat 31437250  T
Q  110 aaatagagctcatttgtaacatt 132  Q
    ||||| || ||||||||||||||    
T  31437251 aaataaagttcatttgtaacatt 31437273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31433045 - 31433167
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || |||||||||||  |||| |||| ||| | ||||| |||||| |||||||||||||| || ||||||| | |||    
T  31433045 tgttataaatattaatagtggatgtccaaatagcaaattagttaatggagcatgcaactagtttattgagcttagttcataagatattctatttccctat 31433144  T
Q  110 aaatagagctcatttgtaacatt 132  Q
    |||||  | ||||||||||||||    
T  31433145 aaataatgttcatttgtaacatt 31433167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 8872289 - 8872362
Alignment:
Q  59 ccatactactaggttattgggcttagttcataagctactctattttcttataaatagagctcatttgtaacatt 132  Q
    |||||||| | | ||||||||||||||  ||| |||||| ||||| | ||||||||||| ||||||||||||||    
T  8872289 ccatactatttgattattgggcttagtctataggctactatatttccctataaatagagttcatttgtaacatt 8872362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 5836213 - 5836153
Alignment:
Q  50 gttattggaccatactactaggttattgggcttagttcataagctactctattttcttata 110  Q
    |||| ||||||||| ||||||  |||| |||||||| |||||| |||||||||||| ||||    
T  5836213 gttaatggaccatattactagactattaggcttagtccataagatactctattttcctata 5836153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 57939 - 58122
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  57939 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 58038  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |  ||||||| ||| |||||||||||||||||    
T  58039 aaatagagctcatttgtaacattgagatacacacattattgaataagaatattgttcctattatctcttcttctccttctctct 58122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 134; Significance: 6e-70; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 111865 - 112058
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| ||||||||    
T  111865 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactct 111964  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  111965 atttccctataaatagagttcatttgtaacattgagatacacacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 112058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 106130 - 106175
Alignment:
Q  148 gtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  106130 gtgaataagaatactgctcctattctctcttcttctccttctctct 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 4e-68; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 23053548 - 23053357
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||    
T  23053548 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgagcttaattcataagctactct 23053449  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  23053448 atttccctataaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctctct 23053357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 25365563 - 25365378
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25365563 caagggggagtgttataaatattaatagtggatgttcaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactct 25365464  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttctc 184  Q
    |||||| ||||||||||||||||||||||||||   | ||||||||||||||||||||||| | |||| |||||||| ||||||||    
T  25365463 attttcctataaatagagctcatttgtaacattgtaaaacacacattagtgaataagaatatttctccttattctctcttcttctc 25365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 35264709 - 35264518
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| ||||||||    
T  35264709 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactct 35264610  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | |||||||||||||||||||||||||| ||||  |||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  35264609 atttccctataaatagagctcatttgtaacattgagat--acacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 35264518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 23059113 - 23058932
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  23059113 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 23059014  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  23059013 aaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctctct 23058932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 35270440 - 35270259
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||| | |||    
T  35270440 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 35270341  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  35270340 aaatagagctcatttgtaacattgagat--acacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 35270259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 39654086 - 39653905
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  39654086 tgttataaatattaatagtggatgtccaaataacaaatgtgttagtggaccatactactaggttattgggcttaattcataagctactatatttccttat 39653987  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||||||||||||| |||||||  |||| |||||| |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  39653986 aaatagagctcatttataacatt--gatatacacatcagtgaataagaatactgctcttattctctcttcttctccttctctct 39653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21171356 - 21171196
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  21171356 caagggggagtgttataaatattaatagtggatgtccaaatggcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactct 21171257  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatact 162  Q
    |||| | |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  21171256 atttccctataaatagagctcatttgtaacattgagat--acacataagtgaataagaatact 21171196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 21178211 - 21178025
Alignment:
Q  9 agtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactc--tattttc 105  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  21178211 agtgttataaatattaatagtggatgttcaaatggcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatattttc 21178112  T
Q  106 ttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 193  Q
     |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||  || ||| | ||| |||||||||||||||||    
T  21178111 ctataaatagagctcatttgtaacattgagat--acacataagtgaataagaatacttttctctagtatctcttcttctccttctctct 21178025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16675554 - 16675711
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    |||||||||||||||||||||||||||||| || || ||||||||||||||||| ||| |||||||||||||||   ||||||| ||||||||||||| |    
T  16675554 caagggggagtgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatactactaggtt---gggcttaattcataagctactat 16675650  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatact 162  Q
    |||| | |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  16675651 atttccctataaatagagctcatttgtaacattgagat--acacataagtgaataagaatact 16675711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 2135902 - 2135850
Alignment:
Q  77 gggcttagttcataagctactctattttcttataaatagagctcatttgtaac 129  Q
    |||||||||  ||||| || ||||||| | |||||||||||||||||||||||    
T  2135902 gggcttagtctataagttaatctatttccatataaatagagctcatttgtaac 2135850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28367151 - 28367071
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatcaa-atagcaaatgtgttattggaccatactactaggttattgggc 80  Q
    |||||||||||||||| |||||||  ||||||| |||| ||||||| || ||||||||| |||| |  ||| |||||||||    
T  28367151 caagggggagtgttatgaatattacaagtggatgtcaatatagcaattgagttattggatcatattgttagcttattgggc 28367071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 1e-67; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 340462 - 340269
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    |||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  340462 caagggggagtgttataaatattaatagcggatgtccaaataacaaatgtgttattgagccatactactaggttattgggcttagttcataagctactct 340363  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||| | |||||||||||| ||||||||  |||||||    
T  340362 attttcttataaatagagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctctcttcttctctctctctct 340269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 29176544 - 29176725
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  29176544 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggtcatactactaggttattgggcttagttcataagctactctatttccctat 29176643  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||    
T  29176644 aaatagagctcatttgtaacatt--gatacacacattagtgaataagaatactgcttctattctttcttcttctccttctctct 29176725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 29185516 - 29185704
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||   |||||||| ||||| || |||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  29185516 caagggggagtgttat---tattaatattggatgtccaaatagaaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactct 29185612  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||    
T  29185613 atttccctataaatagagctcatttgtaacatt--gatacacacattagtgaataagaatactgcttctattctttcttcttctccttctctct 29185704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 346686 - 346521
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  346686 tgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatactactaggttattgagcttagttcataagctactctattttcttat 346587  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctct 175  Q
    |||||||||||||||||||||||  ||||||||||| |||||||| ||||| | ||||||||||||    
T  346586 aaatagagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctct 346521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 8248100 - 8248292
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||| |||||| ||||| |||||| |||||||||||||||    
T  8248100 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatattactagattattaggcttaattcataagctactct 8248199  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 193  Q
    |||||| |||||||||||||||||||||||||| || |  |||  | ||||||||||||||||  || ||| | ||| |||||||||||||||||    
T  8248200 attttcctataaatagagctcatttgtaacattgagtt--acatctaagtgaataagaatacttttctctagtatctcttcttctccttctctct 8248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 22822535 - 22822684
Alignment:
Q  9 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 107  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |    
T  22822535 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccct 22822633  T
Q  108 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  22822634 ataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 22822684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 22826840 - 22826987
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |||    
T  22826840 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccctat 22826938  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  22826939 aaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 22826987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 8242541 - 8242723
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||  |||| |||||| ||||| |||||| ||||||||||||||||||| | |||    
T  8242541 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggtcatattactagattattaggcttaattcataagctactctatttccctat 8242640  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 193  Q
    ||||||||||||||||||||||| || |  |||  | ||||||||||||||||  || ||| | ||| |||||||||||||||||    
T  8242641 aaatagagctcatttgtaacattgagtt--acatctaagtgaataagaatacttttctctagtatctcttcttctccttctctct 8242723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 25830553 - 25830376
Alignment:
Q  5 ggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattt 103  Q
    ||||||||||||||||||||||||||||| || |||||||||||  |||| ||| | || ||||||| || ||||||||||| ||||||||| | |||||    
T  25830553 ggggagtgttataaatattaatagtggatgtccaaatagcaaattggttaatgggctat-ctactagattgttgggcttagtccataagctattatattt 25830455  T
Q  104 tcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttct 183  Q
     | |||||||||||||| |||||| |||| ||  ||||||   |||||||||||||||| |||| |||||||| |||||||    
T  25830454 ccctataaatagagctcctttgtagcattgagggacacac--cagtgaataagaatacttctccttattctctcttcttct 25830376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 2068882 - 2068797
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagcta 95  Q
    ||||||||||||||||||||||| || |||||||||||| |||| | | | |||||| ||| | |||||||||||| |||||||||    
T  2068882 tgttataaatattaatagtggatgtccaaatagcaaatgagttaataggctatactaatagatgattgggcttagtccataagcta 2068797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 9e-66; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 30714384 - 30714193
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  30714384 caagggggagtgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatactactaggttattgggcttaattcataagctactct 30714285  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  30714284 atttccctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcctattctctcttcttctcattctctct 30714193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 30722161 - 30721970
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  30722161 caagggggagtgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatactactaggttattgggcttaattcataagctactct 30722062  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||| | ||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  30722061 atttccctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcctattctctcttcttctcattctctct 30721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 30727759 - 30727578
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||| ||     
T  30727759 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactatattttcctaa 30727660  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  30727659 aaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcctattctctcttcttctcattctctct 30727578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 37209702 - 37209859
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||    
T  37209702 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactct 37209800  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  37209801 atttccctataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 37209859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 21247666 - 21247821
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21247666 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactct 21247764  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | ||||||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  21247765 atttccctataaatagagctcatttgtaacatt--gatacagac--tagtgaataagaata 21247821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 37204233 - 37204382
Alignment:
Q  9 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 107  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |    
T  37204233 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccct 37204331  T
Q  108 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  37204332 ataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 37204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 21241172 - 21241317
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  21241172 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttccctat 21241270  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  21241271 aaatagagctcatttgtaacatt--gatacagac--tagtgaataagaata 21241317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27679793 - 27679662
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  27679793 caagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactct 27679695  T
Q  100 attttcttataaatagagctcatttgtaacatt 132  Q
    |||| | ||||||||||||| ||||||||||||    
T  27679694 atttccctataaatagagctaatttgtaacatt 27679662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 27683565 - 27683444
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||||||||| | |||    
T  27683565 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggtttagttcataagttactctatttccctat 27683467  T
Q  110 aaatagagctcatttgtaacatt 132  Q
    |||||||||||||||||||||||    
T  27683466 aaatagagctcatttgtaacatt 27683444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26196886 - 26197002
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    |||||||| |||||||||||||||||||||||| | ||||||||||||  |||  ||| |||||||| ||||||||||||||||||||||||||||||||    
T  26196886 caagggggggtgttataaatattaatagtggatgttcaaatagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactct 26196985  T
Q  100 attttcttataaataga 116  Q
    |||| | ||||||||||    
T  26196986 atttccctataaataga 26197002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 24042987 - 24042835
Alignment:
Q  36 caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataaatagagctcatttgtaacattaag 135  Q
    |||||| ||||||||||| ||| ||||| || ||| ||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||     
T  24042987 caaataacaaatgtgttaatgggccataatattagattattgggcttagttcataagctactctatttctctataaatagagctcatatgtaacattaaa 24042888  T
Q  136 atacacacattagtgaataagaatactactcc-tattctctattcttctccttctctct 193  Q
    |||||||      |||||||||||| | |||| | |||||| ||||||| |||||||||    
T  24042887 atacaca------tgaataagaatatttctccttgttctcttttcttcttcttctctct 24042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 26197089 - 26196996
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattt 103  Q
    ||||||||||||||||||||||| || |||||||||||  |||  | | |||||||| |||||||||||||||||||||||||||  |||||||    
T  26197089 tgttataaatattaatagtggatgtccaaatagcaaataggtttataggccatactaataggttattgggcttagttcataagcttttctattt 26196996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 14015 - 14203
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||    
T  14015 caagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgagccatactactaggttattgagcttagttcataagctactct 14114  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 190  Q
    |||| | ||||||||||||||||||||||||||  || | |||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  14115 atttccctataaatagagctcatttgtaacatt--gagagacacatcagtgaataagaatactgctcctattctctcttcttctccttctc 14203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 9323 - 9496
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9323 tgttataaatattaatagtggatgtccaaatagcaaatgtattattgggccatactactaggttattgggcttagttcataagctactctattttcttat 9422  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctc 184  Q
    |||||||||||||||||||||||  ||||||||||| | |||||||||||| | |||||||||||| ||||||||    
T  9423 aaatagagctcatttgtaacattgggatacacacatca-tgaataagaatatttctcctattctctcttcttctc 9496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 18738573 - 18738749
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  18738573 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttacctat 18738672  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttc 188  Q
    |||||||||||||||||||||||  || | |||| | ||| |||||||||||| |||||||| ||| ||||||||||||    
T  18738673 aaatagagctcatttgtaacatt--gagagacacgtcagtaaataagaatactgctcctattttctcttcttctccttc 18738749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 33661052 - 33660877
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||||||||| || |||||||||||  |||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33661052 tgttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatattactaggttattgggcttagttcataagctactctattttcttat 33660953  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttctc 184  Q
    |||||||| |||||||||||||| ||||||||||||  ||||||||||||| | |||| |||||||| ||||||||    
T  33660952 aaatagagttcatttgtaacattgagatacacacatcggtgaataagaatatttctccttattctctcttcttctc 33660877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 23427472 - 23427627
Alignment:
Q  1 caagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactct 99  Q
    ||||||||||||||||||||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  23427472 caagggggagtgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactct 23427570  T
Q  100 attttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||| | ||||||||||||||||||||||||||  |||||||||  |||| ||||||||||    
T  23427571 atttccctataaatagagctcatttgtaacatt--gatacacac--tagttaataagaata 23427627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 23421636 - 23421781
Alignment:
Q  11 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 109  Q
    ||||||||||||||||| | ||| || ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||| | |||    
T  23421636 tgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggactatactactaggtt-ttgggcttagttcataagttactctatttccctat 23421734  T
Q  110 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 160  Q
    |||||||||||||||||||||||  |||||||||  |||| ||||||||||    
T  23421735 aaatagagctcatttgtaacatt--gatacacac--tagttaataagaata 23421781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 6435 - 6256
Alignment:
Q  13 ttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataa 111  Q
    ||||||||||||| ||||||| || |||||||||||   ||  ||| | |||| | |||||||||||||||||||||||||||||||||||| | | |||    
T  6435 ttataaatattaacagtggatgtccaaatagcaaataaatttatgggctatacgaataggttattgggcttagttcataagctactctatttccctgtaa 6336  T
Q  112 atagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 193  Q
    ||||| |||| |||||||| |  ||   |  ||| |||||||||||||| | |||||||||||| |||||||||||||||||    
T  6335 atagaactcaattgtaacagt--gagtgatgcatcagtgaataagaatattgctcctattctctcttcttctccttctctct 6256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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