View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12601_low_21 (Length: 249)

Name: NF12601_low_21
Description: NF12601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12601_low_21
NF12601_low_21
[»] chr8 (35 HSPs)
chr8 (9-246)||(45293882-45294119)
chr8 (9-246)||(19247557-19247794)
chr8 (9-246)||(19320741-19320978)
chr8 (14-246)||(14079140-14079372)
chr8 (14-246)||(41156084-41156316)
chr8 (9-246)||(41907303-41907540)
chr8 (9-246)||(29433484-29433721)
chr8 (9-246)||(23626649-23626886)
chr8 (9-246)||(41976904-41977141)
chr8 (30-246)||(12250520-12250736)
chr8 (30-246)||(39444471-39444687)
chr8 (14-228)||(39204094-39204308)
chr8 (14-246)||(30825896-30826128)
chr8 (14-246)||(33424568-33424800)
chr8 (14-246)||(41628336-41628568)
chr8 (14-246)||(12759921-12760152)
chr8 (14-246)||(38961620-38961852)
chr8 (14-246)||(38991964-38992196)
chr8 (14-246)||(42811246-42811477)
chr8 (40-246)||(6477828-6478034)
chr8 (16-188)||(6300929-6301101)
chr8 (16-188)||(23966832-23967004)
chr8 (16-188)||(37029341-37029513)
chr8 (16-188)||(44939945-44940117)
chr8 (18-176)||(22333435-22333593)
chr8 (72-246)||(44383308-44383482)
chr8 (16-188)||(42061106-42061278)
chr8 (14-155)||(19395873-19396014)
chr8 (14-103)||(23522952-23523041)
chr8 (150-246)||(36597985-36598081)
chr8 (168-246)||(20663408-20663486)
chr8 (168-246)||(30548771-30548849)
chr8 (178-246)||(22342286-22342354)
chr8 (14-70)||(22947112-22947168)
chr8 (168-246)||(44213525-44213603)
[»] chr7 (41 HSPs)
chr7 (9-246)||(27735370-27735607)
chr7 (14-246)||(23300046-23300278)
chr7 (14-246)||(9226547-9226779)
chr7 (14-246)||(42245182-42245414)
chr7 (9-246)||(9149066-9149303)
chr7 (9-246)||(33638996-33639233)
chr7 (9-246)||(3795215-3795452)
chr7 (9-246)||(38434871-38435108)
chr7 (14-246)||(23766765-23766997)
chr7 (14-246)||(33030501-33030733)
chr7 (30-246)||(42996158-42996374)
chr7 (9-246)||(47174181-47174417)
chr7 (14-246)||(14308635-14308867)
chr7 (14-246)||(42687257-42687489)
chr7 (14-246)||(8926217-8926449)
chr7 (14-246)||(17477594-17477826)
chr7 (14-246)||(17482041-17482273)
chr7 (14-246)||(17570941-17571173)
chr7 (14-246)||(17575388-17575620)
chr7 (9-246)||(47163874-47164110)
chr7 (40-227)||(19520890-19521077)
chr7 (14-246)||(5962404-5962633)
chr7 (105-246)||(42917555-42917696)
chr7 (16-188)||(47573781-47573953)
chr7 (9-169)||(42827696-42827856)
chr7 (16-188)||(6911803-6911975)
chr7 (14-91)||(11499718-11499795)
chr7 (17-83)||(4481716-4481782)
chr7 (168-246)||(34282585-34282663)
chr7 (168-246)||(19034136-19034214)
chr7 (168-246)||(20720422-20720500)
chr7 (168-246)||(29490662-29490740)
chr7 (14-103)||(17469594-17469684)
chr7 (14-103)||(17583530-17583620)
chr7 (168-246)||(33230442-33230520)
chr7 (168-246)||(20765083-20765161)
chr7 (204-246)||(17170753-17170795)
chr7 (204-246)||(31898306-31898348)
chr7 (204-246)||(48528275-48528317)
chr7 (203-246)||(39649464-39649507)
chr7 (9-49)||(42917696-42917736)
[»] chr6 (29 HSPs)
chr6 (14-249)||(14831167-14831402)
chr6 (14-246)||(33321783-33322015)
chr6 (14-246)||(1073593-1073825)
chr6 (14-246)||(18599316-18599548)
chr6 (14-246)||(14888267-14888499)
chr6 (14-246)||(34320777-34321009)
chr6 (14-246)||(34855640-34855872)
chr6 (14-246)||(15275343-15275575)
chr6 (14-246)||(2520848-2521080)
chr6 (14-246)||(17939207-17939439)
chr6 (14-246)||(4424172-4424403)
chr6 (14-246)||(22374171-22374403)
chr6 (14-246)||(11935010-11935242)
chr6 (14-246)||(1931718-1931943)
chr6 (16-188)||(13457176-13457348)
chr6 (14-170)||(28228841-28228997)
chr6 (100-246)||(7219280-7219426)
chr6 (14-103)||(18311635-18311723)
chr6 (14-103)||(35040936-35041025)
chr6 (150-246)||(7222429-7222525)
chr6 (168-246)||(249597-249675)
chr6 (168-246)||(12580280-12580358)
chr6 (172-246)||(33978647-33978721)
chr6 (9-61)||(25539943-25539995)
chr6 (199-246)||(11945984-11946031)
chr6 (204-246)||(1220245-1220287)
chr6 (204-246)||(9979579-9979621)
chr6 (204-246)||(24445654-24445696)
chr6 (204-246)||(25532938-25532980)
[»] chr2 (36 HSPs)
chr2 (9-246)||(1515309-1515546)
chr2 (9-246)||(9917008-9917245)
chr2 (9-246)||(17037005-17037242)
chr2 (9-246)||(17025328-17025565)
chr2 (9-246)||(17091513-17091750)
chr2 (9-246)||(16883660-16883897)
chr2 (9-246)||(17041350-17041587)
chr2 (14-246)||(26821356-26821588)
chr2 (9-246)||(4811285-4811521)
chr2 (14-246)||(21097435-21097667)
chr2 (14-249)||(42885124-42885359)
chr2 (14-244)||(30567189-30567419)
chr2 (14-244)||(30570874-30571104)
chr2 (14-246)||(16724673-16724905)
chr2 (14-246)||(18093046-18093269)
chr2 (14-246)||(19167967-19168199)
chr2 (14-246)||(36633410-36633642)
chr2 (14-246)||(45205342-45205574)
chr2 (9-246)||(33664114-33664351)
chr2 (9-199)||(10821523-10821713)
chr2 (14-246)||(14752909-14753150)
chr2 (16-188)||(1993381-1993553)
chr2 (16-188)||(6343169-6343341)
chr2 (16-188)||(28501945-28502117)
chr2 (9-170)||(28380322-28380483)
chr2 (19-188)||(14323656-14323825)
chr2 (14-170)||(45398554-45398710)
chr2 (112-246)||(11448102-11448236)
chr2 (14-100)||(35286664-35286750)
chr2 (168-246)||(3710631-3710709)
chr2 (168-246)||(11866707-11866785)
chr2 (168-246)||(35358100-35358178)
chr2 (191-246)||(10822427-10822482)
chr2 (204-246)||(4291166-4291208)
chr2 (204-246)||(9544132-9544174)
chr2 (203-246)||(10048508-10048551)
[»] scaffold0171 (1 HSPs)
scaffold0171 (14-246)||(30319-30551)
[»] chr3 (37 HSPs)
chr3 (9-244)||(40827352-40827587)
chr3 (14-246)||(48521344-48521576)
chr3 (9-246)||(55295096-55295333)
chr3 (14-249)||(8242397-8242632)
chr3 (9-246)||(22477408-22477645)
chr3 (14-246)||(31369339-31369571)
chr3 (20-246)||(19893699-19893923)
chr3 (22-249)||(54793295-54793522)
chr3 (9-246)||(11951292-11951529)
chr3 (14-245)||(51248062-51248293)
chr3 (16-246)||(35088162-35088392)
chr3 (14-246)||(11598286-11598518)
chr3 (14-246)||(23193162-23193394)
chr3 (14-246)||(49112775-49113007)
chr3 (16-246)||(52840857-52841088)
chr3 (14-246)||(54512481-54512711)
chr3 (14-246)||(6104448-6104680)
chr3 (14-246)||(50741053-50741285)
chr3 (14-246)||(50771569-50771801)
chr3 (14-243)||(2845179-2845408)
chr3 (9-248)||(16495590-16495827)
chr3 (16-246)||(52853766-52853996)
chr3 (14-246)||(48976385-48976616)
chr3 (16-246)||(21699897-21700124)
chr3 (14-246)||(11325966-11326196)
chr3 (9-170)||(32755262-32755423)
chr3 (16-188)||(5252698-5252870)
chr3 (14-169)||(36165333-36165488)
chr3 (16-188)||(39796797-39796969)
chr3 (68-180)||(35436662-35436774)
chr3 (9-147)||(52463249-52463387)
chr3 (127-246)||(11382869-11382988)
chr3 (172-246)||(36167933-36168005)
chr3 (171-246)||(44073200-44073275)
chr3 (168-246)||(918371-918449)
chr3 (17-50)||(11383015-11383048)
chr3 (127-208)||(23936884-23936965)
[»] chr1 (32 HSPs)
chr1 (20-246)||(52309543-52309769)
chr1 (14-246)||(31619398-31619630)
chr1 (9-246)||(29840991-29841228)
chr1 (14-246)||(18813928-18814160)
chr1 (14-246)||(34687296-34687528)
chr1 (9-246)||(10763091-10763328)
chr1 (9-246)||(15314959-15315196)
chr1 (14-246)||(51966042-51966274)
chr1 (14-246)||(34691824-34692056)
chr1 (9-246)||(42682099-42682332)
chr1 (14-246)||(38845533-38845765)
chr1 (14-246)||(41830358-41830590)
chr1 (14-246)||(41963239-41963471)
chr1 (14-246)||(52521877-52522109)
chr1 (22-249)||(12714183-12714410)
chr1 (9-249)||(28566023-28566263)
chr1 (14-246)||(48340038-48340270)
chr1 (9-248)||(13662710-13662947)
chr1 (9-246)||(50560751-50560988)
chr1 (16-188)||(18111353-18111525)
chr1 (16-188)||(43254996-43255168)
chr1 (16-188)||(50395410-50395582)
chr1 (14-170)||(16031914-16032070)
chr1 (9-170)||(45004518-45004679)
chr1 (9-170)||(36681029-36681190)
chr1 (9-170)||(17671092-17671252)
chr1 (14-100)||(12246150-12246236)
chr1 (14-103)||(44406227-44406316)
chr1 (16-90)||(24294394-24294468)
chr1 (204-246)||(4891827-4891869)
chr1 (204-246)||(29186618-29186660)
chr1 (204-246)||(33361430-33361472)
[»] scaffold0045 (1 HSPs)
scaffold0045 (14-246)||(13253-13485)
[»] chr5 (33 HSPs)
chr5 (9-246)||(12588595-12588832)
chr5 (16-246)||(1852252-1852482)
chr5 (14-249)||(3150924-3151159)
chr5 (9-246)||(9701919-9702156)
chr5 (14-246)||(7285344-7285576)
chr5 (14-246)||(21029775-21030007)
chr5 (14-246)||(2194832-2195064)
chr5 (14-246)||(3397458-3397690)
chr5 (14-243)||(33611460-33611689)
chr5 (14-246)||(4881940-4882172)
chr5 (14-246)||(20349590-20349822)
chr5 (14-246)||(20996264-20996496)
chr5 (14-207)||(10513421-10513614)
chr5 (14-246)||(26321395-26321627)
chr5 (16-246)||(30688976-30689206)
chr5 (14-246)||(19447668-19447902)
chr5 (9-249)||(3210515-3210753)
chr5 (68-246)||(290275-290453)
chr5 (16-243)||(3028418-3028647)
chr5 (16-188)||(31295996-31296168)
chr5 (14-246)||(27065569-27065797)
chr5 (9-188)||(19395081-19395260)
chr5 (14-172)||(41780569-41780727)
chr5 (61-167)||(287341-287447)
chr5 (14-100)||(33929607-33929693)
chr5 (14-103)||(17996390-17996479)
chr5 (14-103)||(20757771-20757860)
chr5 (14-103)||(38934287-38934376)
chr5 (168-246)||(37464051-37464129)
chr5 (204-249)||(34717314-34717359)
chr5 (203-246)||(30142230-30142273)
chr5 (204-246)||(25697033-25697075)
chr5 (204-246)||(41691003-41691045)
[»] chr4 (43 HSPs)
chr4 (9-246)||(35707960-35708197)
chr4 (9-246)||(40621868-40622104)
chr4 (9-246)||(3839703-3839940)
chr4 (14-246)||(23478630-23478862)
chr4 (14-246)||(33503335-33503567)
chr4 (14-246)||(34056900-34057132)
chr4 (14-246)||(55999034-55999266)
chr4 (14-221)||(1944236-1944444)
chr4 (14-246)||(36856808-36857040)
chr4 (14-246)||(39743083-39743315)
chr4 (16-246)||(14829850-14830080)
chr4 (14-232)||(54331980-54332198)
chr4 (9-246)||(574479-574715)
chr4 (30-246)||(26870637-26870853)
chr4 (14-246)||(38007564-38007796)
chr4 (14-246)||(47720406-47720638)
chr4 (9-246)||(17739760-17739996)
chr4 (14-243)||(37701936-37702165)
chr4 (14-246)||(53342130-53342360)
chr4 (14-246)||(19831734-19831966)
chr4 (14-246)||(13627772-13628004)
chr4 (14-246)||(28135403-28135635)
chr4 (14-246)||(35495880-35496112)
chr4 (14-243)||(17698899-17699128)
chr4 (14-249)||(7644129-7644356)
chr4 (14-178)||(8530618-8530782)
chr4 (16-188)||(15520494-15520666)
chr4 (19-188)||(740752-740921)
chr4 (14-246)||(5272612-5272824)
chr4 (9-147)||(41984565-41984703)
chr4 (16-103)||(22116379-22116466)
chr4 (14-103)||(2776155-2776244)
chr4 (172-246)||(19590555-19590629)
chr4 (14-103)||(21352961-21353051)
chr4 (168-246)||(10259814-10259892)
chr4 (168-246)||(21564563-21564641)
chr4 (168-246)||(43332084-43332162)
chr4 (168-246)||(51452151-51452229)
chr4 (168-246)||(24077883-24077961)
chr4 (168-246)||(26924753-26924831)
chr4 (192-246)||(28120736-28120790)
chr4 (204-246)||(39715037-39715079)
chr4 (204-246)||(52800752-52800794)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-246)||(119741-119968)
[»] scaffold0051 (1 HSPs)
scaffold0051 (14-246)||(49752-49982)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-246)||(9629-9859)
[»] scaffold0006 (2 HSPs)
scaffold0006 (14-222)||(64956-65165)
scaffold0006 (9-246)||(152472-152708)
[»] scaffold0122 (1 HSPs)
scaffold0122 (14-246)||(119-351)
[»] scaffold0047 (1 HSPs)
scaffold0047 (16-246)||(26684-26914)
[»] scaffold0095 (1 HSPs)
scaffold0095 (30-246)||(1040-1256)
[»] scaffold0038 (1 HSPs)
scaffold0038 (14-170)||(29339-29495)
[»] scaffold0385 (2 HSPs)
scaffold0385 (9-104)||(4496-4591)
scaffold0385 (189-246)||(4586-4643)
[»] scaffold0079 (1 HSPs)
scaffold0079 (9-74)||(10927-10992)
[»] scaffold0088 (1 HSPs)
scaffold0088 (30-77)||(53301-53348)
[»] scaffold0069 (1 HSPs)
scaffold0069 (204-246)||(13460-13502)
[»] scaffold0057 (1 HSPs)
scaffold0057 (204-246)||(18898-18940)
[»] scaffold0016 (1 HSPs)
scaffold0016 (9-51)||(100496-100538)


Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 45293882 - 45294119
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | |||||| |||||||||| ||||    
T  45293882 agcaaagatctactttggaacaactcgaacatgcaagttctttagtgacttttcaagatcaaagatgagcttaccactttcttctatcacacgttctctg 45293981  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  45293982 cagaaattgaatcactgcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctctgtgtctgatcatcaatga 45294081  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  45294082 gagtgattgttttgcgctttccttttagaattgttctt 45294119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 19247794 - 19247557
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  19247794 agcaaagatctactttggaacaactcgaacatgtaagttctttggtgactttttgagatcaaagatgagcttaccaccttcttccatcacatgttctctg 19247695  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  19247694 cagaaattgaatcattgcccacccaagtatttttcatagcttgctatttcggcagtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 19247595  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  19247594 gagtgattgttttgtgctttccttttagaattgttctt 19247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 19320978 - 19320741
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  19320978 agcaaagatctactttggaacaactcgaacatgtaagttctttggtgactttttgagatcaaagatgagcttaccaccttcttccatcacatgttctctg 19320879  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  19320878 cagaaattgaatcattgcccacccaagtatttttcatagcttgctatttcggcagtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 19320779  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  19320778 gagtgattgttttgtgctttccttttagaattgttctt 19320741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 14079140 - 14079372
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  14079140 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 14079239  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  14079240 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 14079339  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  14079340 attgttttgcgctttcctttcagaattgttctt 14079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 41156316 - 41156084
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||| || |||||||| | | |||||    
T  41156316 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaaaatgagcttaccaccttctttcaacacacgttctttacagaa 41156217  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||  ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  41156216 attgagccactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatgagagtg 41156117  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  41156116 attgttttgcgctttccttttagaattgttctt 41156084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 41907540 - 41907303
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  41907540 agcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttctctg 41907441  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    | ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | ||||||| |||||||||||    
T  41907440 ctgaaattgaaccactacccacccaagtatttttcatagcttgctctttcggcagtaatgaggcgacaattatactttgtctgtgtctcgtcatcaatga 41907341  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||| ||||||| |||||  ||| ||||||||||||    
T  41907340 gagtgaatgttttgcgcttttctttcagaattgttctt 41907303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 29433721 - 29433484
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| || || |||||  |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||    
T  29433721 agcaaagatctactttggaacaactcgaacgtggaaattcttcggtgacttttccagatcaaagatgagcttaccaccttcttccattacacgttctctg 29433622  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| || | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29433621 cagaaattgaaccattgcccacccaagtatttttcatagctcgctctttcggtggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 29433522  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||  ||| | ||||||||||    
T  29433521 gagtgattgttttgcgcttttctttcataattgttctt 29433484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 23626649 - 23626886
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | |||||||| || ||||||| ||||    
T  23626649 agcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttctatgacacgttctctg 23626748  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23626749 cagaaattgaaccactgcccttccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 23626848  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||  ||| ||||||||||||    
T  23626849 gaatgtttgttttgcgcttttctttcagaattgttctt 23626886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 41977141 - 41976904
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||||||||||  | ||    
T  41977141 agcaaagatctactttggaacaactcaaacatgcaagttcttcggtgacttttcgagatcaaagatgagtttaccaccttcttccatcacacgtcctttg 41977042  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  41977041 cagaaattgaaccactacccacccaggtatttttcataactttatctttcggcggtaatgaggcgacacttatattttctctgtatctggtcatcaatga 41976942  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||| |||||||||| |||||  ||||||||||||||||    
T  41976941 gagcgattgttttgcgctttacttttagaattgttctt 41976904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 30 - 246
Target Start/End: Original strand, 12250520 - 12250736
Alignment:
Q  30 aactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttccca 129  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  12250520 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 12250619  T
Q  130 cccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttc 229  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||     
T  12250620 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagaatgtttgttttgcgctttt 12250719  T
Q  230 tttttagaattgttctt 246  Q
     ||| ||||||||||||    
T  12250720 ctttcagaattgttctt 12250736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 30 - 246
Target Start/End: Complemental strand, 39444687 - 39444471
Alignment:
Q  30 aactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttccca 129  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  39444687 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 39444588  T
Q  130 cccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttc 229  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||     
T  39444587 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagaatgtttgttttgcgctttt 39444488  T
Q  230 tttttagaattgttctt 246  Q
     ||| ||||||||||||    
T  39444487 ctttcagaattgttctt 39444471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 39204308 - 39204094
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||| |||| |||||||||||| |||||||||||   |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  39204308 agatctattttgcaacaactcgaacgtgcaagttcttcgatgacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctacagaa 39204209  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||     
T  39204208 attgaaccactgcccacccaagtatttttcatagcttgctctttcggcggcaatgaggcgacacttatactttctctgtgtttggtcatcaatgagagtt 39204109  T
Q  214 attgttttgtgcttt 228  Q
    ||||||||| |||||    
T  39204108 attgttttgcgcttt 39204094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 30826128 - 30825896
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  30826128 agatctactttggaacaactcgaatttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 30826029  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  ||||||||||| ||||||||||||||||| |||||||||||||   |||| ||||| | ||| ||||||||||||||||||||||||    
T  30826028 attgaaccactgtccacccaagtaattttcatagcttgctctatcggcggtaatgaaatgacagttatattgtctctgtgtctggtcatcaatgagagtg 30825929  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  30825928 attgttttgcgctttcctttcagaattgttctt 30825896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 33424568 - 33424800
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| |||| |||| ||||    
T  33424568 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccactttcttccatcactcgttatctgtagaa 33424667  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||||||  |||||||||||| ||||||||||||||||| |||||||||||||   |||| ||||||| ||| ||||||||||||||||||||||||    
T  33424668 attgaatcaccgcccacccaagtaattttcatagcttgctctatcggcggtaatgatatgacagttatactgtctctgtgtctggtcatcaatgagagtg 33424767  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||  |||||| ||| ||||||||||||    
T  33424768 attgttttacgctttcctttcagaattgttctt 33424800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 41628568 - 41628336
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| | |||  |||||||||    
T  41628568 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaggatgagcttaccaccttcttccatctctcgtaatctgcagaa 41628469  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||||  ||| | ||||||||||||||||||||||    
T  41628468 attgaaccactacccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttataccgtctctctgtctggtcatcaatgagagtg 41628369  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| | |||| ||| ||||||||||||    
T  41628368 attgttttgcgttttcctttcagaattgttctt 41628336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 12760152 - 12759921
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||| ||| | |||||||    
T  12760152 agatctactttggaacaactcaaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacaggttctttgcagaa 12760053  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||| | || ||||| ||||||||||||||| |||||||||| |||||||||||  ||||||| |||||  |||||||||||||||||||||||    
T  12760052 attgaaccac-tgccgcccaaatatttttcatagctttctctttcggccgtaatgaggcggtacttatattttctccgtgtctggtcatcaatgagagtg 12759954  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||||||||||||||||    
T  12759953 attgttttgcgcttttcttttagaattgttctt 12759921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 38961852 - 38961620
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||| | ||| |||||||||||||| |||| |||||| ||    
T  38961852 agatctactttggaacaactcgaatttgcaagtacttatgtgacttttcgagatcaaagatgagatcaccaccttcttccatcactcgttatctgcataa 38961753  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||| ||||||| ||  ||||||| ||| |||| ||||||| ||| | ||||||||||||||||||||||    
T  38961752 attgaaccactgcccacccaagtaattttcatagtttgctctatcaacggtaataaggtgacagttatactgtctctctgtctggtcatcaatgagagtg 38961653  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| | ||||||||||    
T  38961652 attgttttgcgctttcctttcaaaattgttctt 38961620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 38992196 - 38991964
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||| | ||| |||||||||||||| |||| |||||| ||    
T  38992196 agatctactttggaacaactcgaatttgcaagtacttatgtgacttttcgagatcaaagatgagatcaccaccttcttccatcactcgttatctgcataa 38992097  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||| ||||||| ||  ||||||| ||| |||| ||||||| ||| | ||||||||||||||||||||||    
T  38992096 attgaaccactgcccacccaagtaattttcatagtttgctctatcaacggtaataaggtgacagttatactgtctctctgtctggtcatcaatgagagtg 38991997  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| | ||||||||||    
T  38991996 attgttttgcgctttcctttcaaaattgttctt 38991964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 42811246 - 42811477
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||| ||  ||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||| |||| ||||| |||    
T  42811246 agatctactttggaacaactcaaatttgcaagttcttctgtgacttttcgatatcaaagatgagtttaccaccttcttccatcactcgttatctgc-gaa 42811344  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||| |||||| |||||||||||||||||  ||||| |||||||| |||| ||||| | ||| ||||| ||||||||||||||||||    
T  42811345 attgaaccactgcccacgcaagtaattttcatagcttgctctaacggcgataatgaggtgacaattatattgtctctgtgtatggtcatcaatgagagtg 42811444  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  42811445 attgttttgcgctttcctttcagaattgttctt 42811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 6477828 - 6478034
Alignment:
Q  40 tgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttcccacccaagtatt 139  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||||| |||| |||| |||| || |    
T  6477828 tgcaagttcttctgtgacttttcgagatcaaagatgagcttaccacctttttccatcactcgttatctgcagaaattgaaccactgcccatccaaataat 6477927  T
Q  140 tttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaat 239  Q
    |||||||||||||| | |||| |||||||||  |||| |||| || ||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  6477928 tttcatagcttgctttatcggtggtaatgagatgacagttatgctgtctctgtgtctggtcatcaatgagagtgattgttttgcgctttcctttcagaat 6478027  T
Q  240 tgttctt 246  Q
    |||||||    
T  6478028 tgttctt 6478034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 6300929 - 6301101
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  6300929 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 6301028  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6301029 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 6301101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 23966832 - 23967004
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  23966832 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 23966931  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23966932 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 23967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 37029513 - 37029341
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  37029513 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 37029414  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37029413 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 37029341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 44940117 - 44939945
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||| ||||||    
T  44940117 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgtagaaat 44940018  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44940017 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 44939945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 22333435 - 22333593
Alignment:
Q  18 ctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattg 117  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||| |||| |||||||||||||    
T  22333435 ctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccacctttttccatcactcgttatctgcagaaattg 22333534  T
Q  118 aatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgaca 176  Q
    || |||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  22333535 aaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgaca 22333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 44383308 - 44383482
Alignment:
Q  72 gatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgagg 171  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| | |    ||||||||||||||||||| ||| |||||||||||||||||| |    
T  44383308 gatgagcttaccaccttcttccatcacacgttttttgcagaaattgaacccccgttcacccaagtatttttcatatctttctctttcggcggtaatgaag 44383407  T
Q  172 cgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||| ||  |||||| ||||||||||||||||    
T  44383408 cgacacttattttttctctgtgtctggtcatcaatgaaagtgattgtcttacgctttccttttagaattgttctt 44383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 42061106 - 42061278
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| ||||||   ||    
T  42061106 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcatttat 42061205  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42061206 tgatccatagcccacccaagtatttttcatagcttgctctttcggcgataatgaggcgacacttatactttct 42061278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 19395873 - 19396014
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||  |||| | || ||||    
T  19395873 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcattcgttatttgtagaa 19395972  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctct 155  Q
    |||||| |||| |||||| ||| | |||||||||||||||||    
T  19395973 attgaaccactccccaccaaagaaattttcatagcttgctct 19396014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 23522952 - 23523041
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  23522952 agatctactttggaacagctcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtt 23523041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 36597985 - 36598081
Alignment:
Q  150 tgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||| ||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||| ||||||  ||||| ||| ||||||||||||    
T  36597985 tgctctatcggcggtaatgaggtgacagttatactgtctctgtgtctggtcatcaatgagagtgatagttttgcactttcctttcagaattgttctt 36598081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 20663408 - 20663486
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  20663408 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 20663486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 30548771 - 30548849
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||||   ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  30548771 gaggcgacacttatactttctccatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 30548849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 22342286 - 22342354
Alignment:
Q  178 ttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||  || |||||| |||||    
T  22342286 ttatactatctctgtgtctggtcatcaatgagagtgattgttttgcgctttccattcagaattcttctt 22342354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 22947112 - 22947168
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaa 70  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  22947112 agatctacttttgaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaa 22947168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 44213525 - 44213603
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||||   ||| |  |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  44213525 gaggcgacacttatactttctccatgttttttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 44213603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 27735370 - 27735607
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  27735370 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttg 27735469  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  27735470 cagaaattgaatcactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatga 27735569  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  27735570 gagtgattgttttgcgctttccttttagaattgttctt 27735607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 23300046 - 23300278
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| |||||||||||||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  23300046 agatctactttcgaacaactcgaacatgcaagttcttcgatgatttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaa 23300145  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  23300146 attgaaccactgccctcccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctccgtgtctggtcatcaatgagagtg 23300245  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  23300246 attgttttgcgctttccttttagaattgttctt 23300278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 9226547 - 9226779
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||    
T  9226547 agatctactttggaacaactcgaacgtgcaagttcttctttgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctactgaa 9226646  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9226647 attgaatcactgcccacccaaatatttttcatagcttgctctttcggtggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagagtg 9226746  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||  |||||  ||| | ||||||||||    
T  9226747 attgttttacgcttttctttcaaaattgttctt 9226779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 42245182 - 42245414
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| || ||||||||  |||||||||| |||| ||||||||||||||| ||||||||||| | ||||| |||||||||    
T  42245182 agatctactttggaacaactcgaacgtggaagttcttcggtgacttttccagattaaagatgagcttaccaccttcttccattagacgttctctgcagaa 42245281  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42245282 attgaaccactgcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagagtg 42245381  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||| ||||||||||||    
T  42245382 attgttttgcgcttttctttcagaattgttctt 42245414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 9149303 - 9149066
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||||| |||||||||| | ||    
T  9149303 agcaaagatctactttggaacaactcgaacatgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttcaatcacacgttctttg 9149204  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  9149203 cagaaattgaaccactgtccacccaagtatttttcatagctttctcttacggcggtaatgaggcgacacttatattttctctgtgtctgatcatcaatga 9149104  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||  |||||| ||||||||||||||||    
T  9149103 gagtgattgtttttcgctttccttttagaattgttctt 9149066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 33638996 - 33639233
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||| || |||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  33638996 agcaaagatctactttggaacaactcgaacatgtaaattcttcggcgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttg 33639095  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
     ||||||||||||||| |||||||||||||||||||||| || ||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||    
T  33639096 tagaaattgaatcactgcccacccaagtatttttcatagatttctctttcggtggcaatgaggcgacacttatattttctctgtgtctggtcatcaatga 33639195  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  33639196 gagtgattgttttgcgctttccttttagaattgttctt 33639233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 3795452 - 3795215
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| |||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||| | ||    
T  3795452 agcaaagatctattttggaacaactcgaaaatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttg 3795353  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  3795352 cagaaattgaatcactgcccacccaagtatttttcatagttttctctttcgacggtaatgagacgacacttatattttctctgtgtctggtcatcaatga 3795253  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  |||||||||| |||||    
T  3795252 gagtgattgctttgcgcttttcttttagaattattctt 3795215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 38434871 - 38435108
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  38434871 agcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctg 38434970  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  38434971 cagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggcgttaatgaggtgacacttatactttctctgtgtctggtcatcaatga 38435070  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||  ||| ||||||||||||    
T  38435071 gaatgtttgttttgcgcttttctttcagaattgttctt 38435108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 23766765 - 23766997
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  23766765 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 23766864  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||||||  ||||||||||| |||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  23766865 attgaaccactgcccacccaagtaaatttcatagcttactctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 23766964  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| | |||| ||| ||||||||||||    
T  23766965 attgttttgcgttttcctttcagaattgttctt 23766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 33030733 - 33030501
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||  ||| |||||||||    
T  33030733 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgaacttaccaccttcttccatcacttgttatctgcagaa 33030634  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| | ||| |||||||||| |||||||||||||    
T  33030633 attgaaccactgtccacccaagtatttttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctctgtgtctggtaatcaatgagagtg 33030534  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  33030533 attgttttgcgctttcctttcagaattgttctt 33030501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 30 - 246
Target Start/End: Complemental strand, 42996374 - 42996158
Alignment:
Q  30 aactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttccca 129  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  42996374 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 42996275  T
Q  130 cccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttc 229  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||     
T  42996274 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagaatgtttgttttgcgctttt 42996175  T
Q  230 tttttagaattgttctt 246  Q
     ||| ||||||||||||    
T  42996174 ctttcagaattgttctt 42996158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 47174417 - 47174181
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  47174417 agcaaagatctactttggaacaactcgaacgtgcaagtttttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctg 47174318  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||| |||||| | ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| |    
T  47174317 cagaaattaaatcac-tgccacctaagcatttttcatagcttgctctttctgcggtaatgaggcgacacttatactttctccgtgtctggtcatcaatta 47174219  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||| || ||||||| |||||| ||| |||||| |||||    
T  47174218 gagcgactgttttgcgctttcctttcagaattattctt 47174181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 14308867 - 14308635
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  14308867 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 14308768  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||| || |||| ||||||||||||||  |||| ||||| | ||| ||||||||||||||||||||||||    
T  14308767 attgaaccactgcccacccaagtaattttcatagatttctctatcggcggtaatgagatgacaattatattgtctctgtgtctggtcatcaatgagagtg 14308668  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||| ||||||||||||    
T  14308667 attgttttgcgctttactttcagaattgttctt 14308635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 42687489 - 42687257
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  42687489 agatctactttggaacaactcgaatttgcaatttcttctgtgactttccgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 42687390  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||| ||||| |||| |||||||||||| ||||||||||||||| |||| ||||||| ||| ||||||| ||||||||||||||||    
T  42687389 attgaaccactgcccacctaagtaatttttatagcttgctctatcggcggtaatgaggtgacaattatactgtctctgtgtctagtcatcaatgagagtg 42687290  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  42687289 attgttttgcgctttcctttcagaattgttctt 42687257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 8926217 - 8926449
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||| |||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  8926217 agatctactttgaaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgcagaa 8926316  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||| ||||||| ||||||||||||||||| ||||| ||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  8926317 attgaaccactacccatccaagtaattttcatagcttgctctatcggcagtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 8926416  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||| ||||| |||||| ||| ||||||||||||    
T  8926417 atttttttgcgctttcctttcagaattgttctt 8926449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 17477826 - 17477594
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||    
T  17477826 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17477727  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||| ||||||| ||||||||||||||||| | ||||||||||||| |||| ||||||| ||| | | ||||||||||||||||||||    
T  17477726 attgaaccactgcccatccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtctctatatctggtcatcaatgagagtg 17477627  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||| ||||||||||||    
T  17477626 attgttttgcgcttttctttcagaattgttctt 17477594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 17482273 - 17482041
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||    
T  17482273 agatctactttggaacaactcgaatttgcaagttcttctatgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17482174  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| | | ||||||||||| |||| ||||||| ||| | | ||||||||||||||||||||    
T  17482173 attgaaccactgcccacccaagtaattttcatagcttgctctattgacggtaatgaggtgacagttatactgtctctatatctggtcatcaatgagagtg 17482074  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  17482073 attgttttgcgctttcctttcagaattgttctt 17482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 17570941 - 17571173
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||    
T  17570941 agatctactttggaacaactcgaatttgcaagttcttctatgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17571040  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| | | ||||||||||| |||| ||||||| ||| | | ||||||||||||||||||||    
T  17571041 attgaaccactgcccacccaagtaattttcatagcttgctctattgacggtaatgaggtgacagttatactgtctctatatctggtcatcaatgagagtg 17571140  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  17571141 attgttttgcgctttcctttcagaattgttctt 17571173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 17575388 - 17575620
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||    
T  17575388 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17575487  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||| ||||||| ||||||||||||||||| | ||||||||||||| |||| ||||||| ||| | | ||||||||||||||||||||    
T  17575488 attgaaccactgcccatccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtctctatatctggtcatcaatgagagtg 17575587  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||| ||||||||||||    
T  17575588 attgttttgcgcttttctttcagaattgttctt 17575620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 47163874 - 47164110
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||    ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  47163874 agcaaagatctattttggaacaactcgaacgtgcaagttcttcgaggacttttcgagatcaaagatgagcttaccaccttcttccatcagacgttctctg 47163973  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||| ||||| ||||  | ||||||||||||||||||||||||||||||| ||||||| ||  || ||||||||||||| |||||||||||||||||||    
T  47163974 cagaa-ttgaaccactgtcaacccaagtatttttcatagcttgctctttcgacggtaattagttgatacttatactttctctgtgtctggtcatcaatga 47164072  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||  ||| |||||| |||||    
T  47164073 gagtgattgttttgcgcttttctttcagaatttttctt 47164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 19521077 - 19520890
Alignment:
Q  40 tgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttcccacccaagtatt 139  Q
    ||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||  ||||||||||| |    
T  19521077 tgcaagttcttctatgacttttcgagattaaagatgagcttaccaccttcttccatcactcgttatctgcataaattgaatcactggccacccaagtaat 19520978  T
Q  140 tttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctt 227  Q
    |||||||||||||||| ||||||||||||||  |||| ||||| | ||| ||||||||||||||||||||||||||||||||| ||||    
T  19520977 tttcatagcttgctctatcggcggtaatgagttgacatttatattgtctctgtgtctggtcatcaatgagagtgattgttttgcgctt 19520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 5962633 - 5962404
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||| |||||||||||||  | ||| ||||| | ||||||||| |||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  5962633 agatctactt-ggaacaactcgaatttacaacttcttctatgacttttcaagatcaaagatgagcttaccaccttcttccatcacttgttatctgcagaa 5962535  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| || ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||  |  ||||||||||||||||||||| ||    
T  5962534 attgaaccactgccaacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacatttatactgac--tgtgtctggtcatcaatgagaatg 5962437  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| |||| |||||||    
T  5962436 attgttttgcgctttcctttcagaaatgttctt 5962404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 42917696 - 42917555
Alignment:
Q  105 tctgcagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatca 204  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  42917696 tctgcagaaattgaatcactgcccaaccaagtatttttcatagctttctctttcggcggtaatgaggcgacgcttatactttctctgtgtctggtcatca 42917597  T
Q  205 atgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  42917596 atgagagtgattgttttgcgctttccttttagaattgttctt 42917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 47573781 - 47573953
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  47573781 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 47573880  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47573881 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 47573953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 42827696 - 42827856
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||    
T  42827696 agcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttccatcacatgttctctg 42827795  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatga 169  Q
    |||||||||||  | |  ||||||||||||||||||||||||||| |||||| ||||||||    
T  42827796 cagaaattgaacaattgtccacccaagtatttttcatagcttgctgtttcggtggtaatga 42827856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 6911803 - 6911975
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||  ||    
T  6911803 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagtcat 6911902  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  6911903 tgatccatagcccacccaagtatttttcatagcttgctctttcggcagtaatgaggcaacacttatactttct 6911975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 11499795 - 11499718
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttctt 91  Q
    ||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||| ||||||||| |||||||    
T  11499795 agatctactttggaacaactcgaatttgcaagttcttctgtgacctttcgagatcaaagacgagcttaccaccttctt 11499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 4481716 - 4481782
Alignment:
Q  17 tctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacc 83  Q
    |||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||    
T  4481716 tctactttggaacaactcgaacgtgcaatttcttcggtgacttttcgagatcaaagatgagcttacc 4481782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 34282585 - 34282663
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  34282585 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttccttttagaattgttctt 34282663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 19034136 - 19034214
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  19034136 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 19034214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 20720500 - 20720422
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  20720500 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 20720422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 29490740 - 29490662
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  29490740 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 29490662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 17469684 - 17469594
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttc-ttccatcacacgtt 103  Q
    ||||||||||||||||| ||||||  ||| | ||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||||| ||||    
T  17469684 agatctactttggaacagctcgaatttgctatttcttctgtgacttttcgagataaaatatgagcttaccaccttctttccatcactcgtt 17469594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 17583530 - 17583620
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttc-ttccatcacacgtt 103  Q
    ||||||||||||||||| ||||||  ||| | ||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||||| ||||    
T  17583530 agatctactttggaacagctcgaatttgctatttcttctgtgacttttcgagataaaatatgagcttaccaccttctttccatcactcgtt 17583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 33230442 - 33230520
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| | | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  33230442 gaggcgacacttatactttttctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 33230520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 20765161 - 20765083
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||||   ||| |  |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  20765161 gaggcgacacttatactttctccatgttttttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 20765083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 17170795 - 17170753
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  17170795 aatgagagtgattgttttgcgctttccttttagaattgttctt 17170753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 31898306 - 31898348
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  31898306 aatgagagtgattgttttgcgctttccttttagaattgttctt 31898348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 48528275 - 48528317
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  48528275 aatgagagtgattgttttgcgctttccttttagaattgttctt 48528317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Original strand, 39649464 - 39649507
Alignment:
Q  203 caatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||| | |||| ||||||||||||||||    
T  39649464 caatgagagtgattgttttgcgatttccttttagaattgttctt 39649507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42917736 - 42917696
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttct 49  Q
    |||| ||||||||||||||| |||||||| |||||||||||    
T  42917736 agcaaagatctactttggaagaactcgaaaatgcaagttct 42917696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 14831402 - 14831167
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||    
T  14831402 agatctactttggaacaactcgaacatgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttgaagaa 14831303  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  14831302 attgaaccactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggtgacacttatattttctctgtgtctggtcatcaatgagagtg 14831203  T
Q  214 attgttttgtgctttctttttagaattgttcttaac 249  Q
    ||||||||| ||||||||||||||||||||||||||    
T  14831202 attgttttgcgctttctttttagaattgttcttaac 14831167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 33321783 - 33322015
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||| ||||||||||||||||||| | |||||||    
T  33321783 agatctactttggaacaactcgaacatgcaagttcttcggtgacttctcgagatcaaagatgaacttaccaccttcttccatcacacgttctttgcagaa 33321882  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33321883 attgaaccactgcccacccaagtatttttcatagctttctcattcgacgataatgaggcgacacttatattttctatgtgtctggtcatcaatgagagtg 33321982  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||| ||||||||||    
T  33321983 attgttttgcgctttccttttataattgttctt 33322015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 1073593 - 1073825
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  1073593 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 1073692  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  1073693 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 1073792  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  1073793 attgttttgcgctttcctttcagaattgttctt 1073825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 18599316 - 18599548
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  18599316 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 18599415  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  18599416 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 18599515  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  18599516 attgttttgcgctttcctttcagaattgttctt 18599548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 14888267 - 14888499
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  14888267 agatctactttggaacaactcgaatttgcaagttcttctatgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 14888366  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  14888367 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 14888466  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  14888467 attgttttgcgctttcctttcagaattgttctt 14888499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 34321009 - 34320777
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| | |||||||||||||||| || | |||||||    
T  34321009 agatctactatggaacaactcgaacatgcaagttctttggtgatttttcgagatcaaagatgagattatcaccttcttccatcacacattctatgcagaa 34320910  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||||| | |||  |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  34320909 attgaatcattgcccttccaagtatttttcacagcatgctctttcggcggtaatgagacgacacttatactttctctgtgtctggtcatcaatgagagtg 34320810  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    || |||||| |||||| ||||||||||||||||    
T  34320809 atagttttgcgctttccttttagaattgttctt 34320777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 34855872 - 34855640
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||| |||| |||||||||    
T  34855872 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagataaaaaatgagcttaccaccttcttccatcactcgttatctgcagaa 34855773  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  34855772 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctttgtgtctggtcatcaatgagagtg 34855673  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  34855672 attgttttgcgctttcctttcagaattgttctt 34855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 15275575 - 15275343
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||| || ||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||    
T  15275575 agatctactttcgaacaactcaaatatgcaagttcttcagtgacttttcgagatcaaagatgagcttaccactttcttccatcactcgttctctgcagaa 15275476  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| | ||| |||||||| |||||||||||||||    
T  15275475 attgaaccactgctcacccaagtatttttcatagcttgctctatcggcggtaatgaggtgacaattataatgtctctgtgtctgatcatcaatgagagtg 15275376  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  15275375 attgttttgcgctttcctttcagaattgttctt 15275343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 2521080 - 2520848
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||    
T  2521080 agatctattttggaacaactcgaatttgcaagttcttatgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgtagaa 2520981  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| |||| |||||||||  |||| ||||||| ||| |||||||| |||||||||||||||    
T  2520980 attgaaccactgcccacccaagtaattttcatagcttgctctatcggtggtaatgagatgacagttatactgtctctgtgtctgatcatcaatgagagtg 2520881  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||  ||||| ||| ||||||||||||    
T  2520880 attgttttgcactttcctttcagaattgttctt 2520848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 17939439 - 17939207
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  17939439 agatctactttggaacaactcgaatttgcaagttattctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttctctgcagaa 17939340  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| | |||||||||| ||||||||||||||||| | ||||||||||||| |||| ||||||| | | ||||||||||||||||||| ||||    
T  17939339 attgaaccactgctcacccaagtaattttcatagcttgctctattggcggtaatgaggtgacaattatactgtatctgtgtctggtcatcaatgatagtg 17939240  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||| |||| |||||| ||| ||||||||||||    
T  17939239 attgctttgcgctttcctttcagaattgttctt 17939207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 4424403 - 4424172
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||| |||||||| ||||| |||| | |||||||    
T  4424403 agatctactttggaacaactcgaatttgcaagttcttttgtaacttttggagatcaaagatgagcttaccaccttcttctatcactcgttatatgcagaa 4424304  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||| | |||| | ||||| ||| ||||||||||||||| ||||| ||    
T  4424303 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatga-gtgacagtgatactgtctctgtgtctggtcatcattgagaatg 4424205  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  4424204 attgttttgcgctttcctttcagaattgttctt 4424172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 22374171 - 22374403
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||    
T  22374171 agatctactttggaacaactcaaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgctgaa 22374270  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    | |||| |||| ||| | |||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||| ||| ||||||||||||||||| ||    
T  22374271 aatgaaccactgcccgcgcaagtatttttcatagcttgctctatcggcggtaatgaggtgacagttatactgtctctgtatctggtcatcaatgagaatg 22374370  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    | |||||||  ||||| ||| ||||||||||||    
T  22374371 actgttttgcactttcctttcagaattgttctt 22374403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 11935010 - 11935242
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||| |||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  11935010 agatttactttggaacaactcgaatttgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 11935109  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    || ||| || |  ||||||||||| |||| |||||||||||| |||| |||||||||  |||| ||| | | ||| |||||||| |||||||||||||||    
T  11935110 atagaaccaatgaccacccaagtaattttaatagcttgctctatcggaggtaatgagatgacagttaaaatgtctctgtgtctgatcatcaatgagagtg 11935209  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  11935210 attgttttgcgctttcctttcagaattgttctt 11935242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 1931943 - 1931718
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||   ||||||||||||||       ||||||||| |||||||| |||||| ||| ||||| |||    
T  1931943 agatctacttttgaacaactcgaacgtgcaagttcttcgatgacttttcgagat-------gagcttaccaccttcttctatcacatgttctctgctgaa 1931851  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  1931850 attgaaccactgcccacccaaatatttttcatagcttgctctttcggaggtaatgaggcgacacttatactttctttgtgtcttgtcaccaatgagagtg 1931751  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||  ||||  ||| ||||||||||||    
T  1931750 attgttttgcacttttctttcagaattgttctt 1931718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 13457176 - 13457348
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  13457176 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 13457275  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13457276 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 13457348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 28228841 - 28228997
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  28228841 agatctactttggaacaactcgaacgtataagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttccatcacacgttctctgcagaa 28228940  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
    ||||||  | |  |||||||||||||||||||||||| ||||||||| |||||||||    
T  28228941 attgaactattgtccacccaagtatttttcatagctttctctttcggtggtaatgag 28228997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 7219280 - 7219426
Alignment:
Q  100 cgttttctgcagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggt 199  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||| || |||| | |||| ||||||| ||| ||||||||||    
T  7219280 cgttctctgcagaaattgaaccactgcccacccaagtatttttcatagcttgctcgatcggctgtgatgatgtgacagttatactgtctctgtgtctggt 7219379  T
Q  200 catcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||||| | |||| ||| ||||||||||||    
T  7219380 catcaatgagagtgattgttttgcgttttcctttcagaattgttctt 7219426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 18311723 - 18311635
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||| |||| |||||||||||||| ||||    
T  18311723 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagc-taccaccttcttccatcactcgtt 18311635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 35041025 - 35040936
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    |||||||||||||||||||||| |  ||||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  35041025 agatctactttggaacaactcggatttgcaagttcttctctgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtt 35040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 7222525 - 7222429
Alignment:
Q  150 tgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||| ||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||    
T  7222525 tgctctatcgacggtaatgaggtgacagttatactgtctctgtgtctggtcatcaatgagagtgattgttttgcgcttttctttcagaattgttctt 7222429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 249675 - 249597
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  249675 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 249597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 12580280 - 12580358
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  12580280 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 12580358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 33978721 - 33978647
Alignment:
Q  172 cgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||| ||||| | ||||| ||||||||||||||||||||||||| |||||| ||| |||||| |||||    
T  33978721 cgacacttatattttctctatgtctagtcatcaatgagagtgattgttttgcgctttcctttcagaattattctt 33978647  T

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Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 25539995 - 25539943
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgactttt 61  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  25539995 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgactttt 25539943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 11945984 - 11946031
Alignment:
Q  199 tcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  11945984 tcatcaatgagagtgattgttttgcgctttcctttcagaattgttctt 11946031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 1220287 - 1220245
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  1220287 aatgagagtgattgttttgcgctttccttttagaattgttctt 1220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 9979579 - 9979621
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  9979579 aatgagagtgattgttttgcgctttccttttagaattgttctt 9979621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 24445696 - 24445654
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  24445696 aatgagagtgattgttttgcgctttccttttagaattgttctt 24445654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 25532980 - 25532938
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  25532980 aatgagagtgattgttttgcgctttccttttagaattgttctt 25532938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 4e-96; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 1515309 - 1515546
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  1515309 agcaaagatctactttggaacaactcaaacatgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttg 1515408  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1515409 cagaaattgaaccactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatga 1515508  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||| ||||||| |||||| ||||||||||||||||    
T  1515509 gagtgaatgttttgcgctttccttttagaattgttctt 1515546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 9917008 - 9917245
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||| | ||    
T  9917008 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttg 9917107  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||    
T  9917108 cagaaattgaatcactgcccacccaagtatttttcatagctttctctttcggcagtaatgagacgacacttatattttctctgtgtctggtcatcaatga 9917207  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||  |||||  ||||||||||||||||    
T  9917208 gagtgattgctttaagcttttcttttagaattgttctt 9917245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 17037242 - 17037005
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  17037242 agcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctg 17037143  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17037142 cagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 17037043  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||  ||| ||||||||||||    
T  17037042 gaatgtttgttttgcgcttttctttcagaattgttctt 17037005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 17025565 - 17025328
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  17025565 agcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctg 17025466  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  17025465 cagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaataa 17025366  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||  ||| ||||||||||||    
T  17025365 gaatgtttgttttgcgcttttctttcagaattgttctt 17025328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 17091750 - 17091513
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  17091750 agcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctg 17091651  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17091650 cagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggtggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 17091551  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||  ||| ||||||||||||    
T  17091550 gaatgtttgttttgcgcttttctttcagaattgttctt 17091513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 16883897 - 16883660
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| | ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  16883897 agcaaagatctattgtggaacaactcgaacgtgcaagttcttcggtgactttccgagatcaaagatgagcttaccaccttcttccatcacacgttctctg 16883798  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  16883797 cagaaattgaaccaatgcccacccaagtatttttcatagcttgctctttcggcggtaatgagacgacacttatactttctctatgtctggtaatcaatga 16883698  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||  ||||| ||| | ||||||||||    
T  16883697 gagtgattgttttgcactttcctttcaaaattgttctt 16883660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 17041587 - 17041350
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| | ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  17041587 agcaaagatctattgtggaacaactcgaacgtgcaagttcttcggtgactttccgagatcaaagatgagcttaccaccttcttccatcacacgttctctg 17041488  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  17041487 cagaaattgaaccaatgcccacccaagtatttttcatagcttgctctttcggcggtaatgagacgacacttatactttctctatgtctggtaatcaatga 17041388  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||  ||||| ||| | ||||||||||    
T  17041387 gagtgattgttttgcactttcctttcaaaattgttctt 17041350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 26821588 - 26821356
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  26821588 agatctactttggaacaactcgactttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 26821489  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  26821488 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatactgtctctgtgtctggtcatcaatgagagtg 26821389  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| | ||||||||||    
T  26821388 attgttttgcgctttcctttcataattgttctt 26821356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 4811521 - 4811285
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||| |||||| | ||    
T  4811521 agcaaagatctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagatcagagatgagcttaccaccttcttccatcgcacgttctatg 4811422  T
Q  109 cagaaattgaatcacttccca-cccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatg 207  Q
     ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||    
T  4811421 tagaaattgaatcattgcccaccccaagtatttttcatagcttgctctttcggcggtaatgaggcgacatttatactttc--cgtgtctggtcatcaatg 4811324  T
Q  208 agagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||| |||||| ||| ||||||||||||    
T  4811323 agagtgattgttttgcgctttcctttcagaattgttctt 4811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 21097667 - 21097435
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||    
T  21097667 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatttgcagaa 21097568  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
     ||||| |||| |||||||||||| ||||||||||||||||| |||||| |||||||  |||| ||||| | ||| ||||||||||||| ||||||||||    
T  21097567 tttgaaccactacccacccaagtaattttcatagcttgctctatcggcgataatgagatgacagttatattgtctctgtgtctggtcattaatgagagtg 21097468  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||| ||| ||||||||||||    
T  21097467 attgttttgtgctttcctttcagaattgttctt 21097435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 42885359 - 42885124
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||| |||    
T  42885359 agatctactttagaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccatcttccatcactcgttatctgccgaa 42885260  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  ||||||||||| ||||||||||||||||| ||||||||||||||| |||  ||||||| ||| |||||||||||||||||||||||     
T  42885259 attgaaccactgtccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacgattatactatctttgtgtctggtcatcaatgagagtt 42885160  T
Q  214 attgttttgtgctttctttttagaattgttcttaac 249  Q
    ||||||||| |||||| ||| |||||||||||||||    
T  42885159 attgttttgcgctttcctttcagaattgttcttaac 42885124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 30567189 - 30567419
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  30567189 agatctactttggaacaactcgaatttgcaagttcttctgtgtcttttcgagatcaaagatgagcttaccaccttcttcaatcactcgttatctgcagaa 30567288  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||| | ||| | ||||||||||||||||||||||    
T  30567289 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatattgtctctatgtctggtcatcaatgagagtg 30567388  T
Q  214 attgttttgtgctttctttttagaattgttc 244  Q
    ||||||||| | |||| ||| ||||||||||    
T  30567389 attgttttgcgttttcctttcagaattgttc 30567419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 30570874 - 30571104
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  30570874 agatctactttggaacaactcgaatttgcaagttcttctgtgtcttttcgagatcaaagatgagcttaccaccttcttcaatcactcgttatctgcagaa 30570973  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||| | ||| | ||||||||||||||||||||||    
T  30570974 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatattgtctctatgtctggtcatcaatgagagtg 30571073  T
Q  214 attgttttgtgctttctttttagaattgttc 244  Q
    ||||||||| | |||| ||| ||||||||||    
T  30571074 attgttttgcgttttcctttcagaattgttc 30571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 16724673 - 16724905
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  16724673 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcattatctgcagaa 16724772  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||| ||||||| ||||||||||||||||| || ||| |||||||  |||| ||||||| ||| | ||||||||||||||||||||||    
T  16724773 attgaaccactgcccaaccaagtaattttcatagcttgctctatctgcgataatgagatgacagttatactgtctctatgtctggtcatcaatgagagtg 16724872  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  16724873 attgttttgcgctttcctttcagaattgttctt 16724905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 18093046 - 18093269
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||         ||| | |||||||    
T  18093046 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaacaccttctt---------gttctttgcagaa 18093136  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18093137 attgaaccactgtccacccaagtatttttcatagctttctctttcggtggtaatgaggcgacacttatattttctttgtgtctggtcatcaatgagagtg 18093236  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  18093237 attgttttgcgctttccttttagaattgttctt 18093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 19167967 - 19168199
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||  |||| |||| |||||| ||    
T  19167967 agatctactttggaacaactcgaatttgcaagttcttctgtgactttttgagatcaaatatgagcttaccaccttcttctgtcactcgttatctgcataa 19168066  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||||||||||||    
T  19168067 attgaaccactgcccacccaagtacttttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctctgtgtctggtcatcaatgagagtg 19168166  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||||||| |||||| |||||    
T  19168167 attgttttgcgctttcttttcagaattattctt 19168199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 36633410 - 36633642
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  36633410 agatctacgttggaacaactcgaacgtgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcacttgttatctgcagaa 36633509  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||| || |||| |||||||||||| ||||||||||||||||| ||||| ||||||||| |||| ||||| | ||||||||||||||||||||| ||||||    
T  36633510 attaaaccactgcccacccaagtaattttcatagcttgctctatcggcagtaatgaggtgacaattatattgtctatgtgtctggtcatcaataagagtg 36633609  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    || |||||| |||||| ||| ||||| ||||||    
T  36633610 atagttttgcgctttcctttcagaatcgttctt 36633642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 45205342 - 45205574
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||| |||| |||||||||    
T  45205342 agatctactttggaacaactcgaacgcgcaagttcttctgtgactttttgagatcaaagatgaacttaccaccttcttccatcactcgttctctgcagaa 45205441  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| | |||||||||||||||||||||||||||  ||||| |||||| ||||| | ||||||| ||| ||||||||||||||||||||||||    
T  45205442 attgaaccactgctcacccaagtatttttcatagcttgctcgatcggctgtaatgtggcgatagttatactgtctctgtgtctggtcatcaatgagagtg 45205541  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| | |||| ||| ||||||||||||    
T  45205542 attgttttgcgttttcctttcagaattgttctt 45205574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 33664114 - 33664351
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||| |||| ||||    
T  33664114 agcaaagatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaggatgagtttaccaccttcttccatcactcgttctctg 33664213  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
     |||||||||| || | |||||||||||| ||||||||||||||| | | ||||||||||||| |||| ||||||| ||| |||||||||||||||||||    
T  33664214 tagaaattgaaccattgcccacccaagtaattttcatagcttgctttattggcggtaatgaggtgacagttatactgtctctgtgtctggtcatcaatga 33664313  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
     ||||||||||||| |||||| ||| ||||||||||||    
T  33664314 aagtgattgttttgcgctttcctttcagaattgttctt 33664351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 10821523 - 10821713
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||   ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  10821523 agcaaagatctattttagaacaactcgaacgtgcaagttcttcgatgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttctctg 10821622  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggt 199  Q
    ||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10821623 cagaaattgaaccactgccaacctaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggt 10821713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 14753150 - 14752909
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||| |||    
T  14753150 agatttactttggaacaactcgaacgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcactagttctctgctgaa 14753051  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttcta---------tgtgtctggtcatca 204  Q
    |||||| ||||  |||||||| ||  |||||||||||||||||||||||||||||| |||||||||||||||||||         |||||||| ||||||    
T  14753050 attgaaccactgtccacccaaataaatttcatagcttgctctttcggcggtaatgaagcgacacttatactttctatactttctctgtgtctgatcatca 14752951  T
Q  205 atgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||  |||||  ||| ||||||||||||    
T  14752950 atgagagtgattgttttacgcttttctttcagaattgttctt 14752909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 1993381 - 1993553
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  1993381 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 1993480  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1993481 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 1993553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 6343169 - 6343341
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  6343169 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 6343268  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6343269 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 6343341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 28502117 - 28501945
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  28502117 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 28502018  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28502017 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 28501945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 28380322 - 28380483
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| |||| |||||||||||||||| || ||||    
T  28380322 agcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagttgagcgtaccaccttcttccatcacactttctctg 28380421  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||    
T  28380422 cagaaattgaatcattacccacccaagtatttttcatagcttgctctttcggtgataatgag 28380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 14323656 - 14323825
Alignment:
Q  19 tactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattga 118  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||| |||||||    
T  14323656 tactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcaaaaattga 14323755  T
Q  119 atcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
      ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14323756 tccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 14323825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 45398710 - 45398554
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||    
T  45398710 agatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagttgagcgtaccaccttcttccatcacacgttctctgcagaa 45398611  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||| | |||||||    
T  45398610 attgaatcattgtccacccaagtatttttcatagcttgctctgtcggtgataatgag 45398554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 11448236 - 11448102
Alignment:
Q  112 aaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagag 211  Q
    |||||||| |||| |||||| || |||||||||||||||||||| ||||||||||||||| |||| ||||||| |||  |||||||||||||||||||||    
T  11448236 aaattgaaccactgcccacctaaatatttttcatagcttgctctatcggcggtaatgaggtgacaattatactgtctcggtgtctggtcatcaatgagag 11448137  T
Q  212 tgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||| |||||| ||| ||||||||||||    
T  11448136 tgattgttttgcgctttcctttcagaattgttctt 11448102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 35286664 - 35286750
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacac 100  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35286664 agatctacttttgaacaactcgaacgtgcaagttcttccgtgacttttcgagatcaaagatgagcttaccaccttcttccatcacac 35286750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 3710709 - 3710631
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  3710709 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 3710631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 11866707 - 11866785
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  11866707 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 11866785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 35358100 - 35358178
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  35358100 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 35358178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 10822427 - 10822482
Alignment:
Q  191 gtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||||||||||||||| |||||  ||| |||||| |||||    
T  10822427 gtgtctggtcatcaatgagagtgattgttttgcgcttttctttcagaatttttctt 10822482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 4291166 - 4291208
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  4291166 aatgagagtgattgttttgcgctttccttttagaattgttctt 4291208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 9544132 - 9544174
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  9544132 aatgagagtgattgttttgcgctttccttttagaattgttctt 9544174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Original strand, 10048508 - 10048551
Alignment:
Q  203 caatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||    
T  10048508 caattagagtgattgttttgcgctttccttttagaattgttctt 10048551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 30319 - 30551
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  30319 agatctactttggaacaactcaaacatgcaagttctttggtgacttttcaagatcaaagatgagcttatcaccttcttccatcacacgttctctgcagaa 30418  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30419 attgaatcactgcccatccaagtatttttcatagcttgctcttttggcggtaatgaggtgacacttatactttctctgtgtctggtcatcaatgagagtg 30518  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  30519 attgttttgcgctttcctttaagaattgttctt 30551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 40827352 - 40827587
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||    
T  40827352 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccacattcttccatcacacgttctttg 40827451  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  40827452 cagaaattgaaccactgcccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctctgtgtttggtcatcaatga 40827551  T
Q  209 gagtgattgttttgtgctttctttttagaattgttc 244  Q
    |||||||||||||| |||||| ||||||||||||||    
T  40827552 gagtgattgttttgcgctttccttttagaattgttc 40827587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 48521344 - 48521576
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  48521344 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 48521443  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  48521444 attgaaccactatccacccaagtatttttcatagctttctcttttggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatgagagtg 48521543  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| |||||||||| |||||    
T  48521544 attgttttgcgctttccttttagaattcttctt 48521576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 55295096 - 55295333
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||| |||||| | ||    
T  55295096 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagataagcttaccaccttcttccatcgcacgttctttg 55295195  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  55295196 cagaaattgaaccactgtccacccaagtatttttcatagctttctctttcagcggtaatgaggcgacacttatattttctttgtgtctggtcatcaatga 55295295  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  55295296 gagtgattgttttgcgctttccttttagaattgttctt 55295333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 8242632 - 8242397
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||| ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||    
T  8242632 agatccactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccctcttccattacacgttctctgcagaa 8242533  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  8242532 attgaaccactgtccacccaagtatttttcatagcttgctcttttagcggtaatgaggcgacacctatactttctctgtgtctggtcatcaatgagagtg 8242433  T
Q  214 attgttttgtgctttctttttagaattgttcttaac 249  Q
    ||||||||| |||||| ||| |||||||||||||||    
T  8242432 attgttttgcgctttcctttcagaattgttcttaac 8242397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 22477645 - 22477408
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||| |||| ||||||||||||||||||| | ||    
T  22477645 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagaggagcataccaccttcttccatcacacgttctttg 22477546  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  22477545 cagaaattgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctctgtgtctggtcatcaatga 22477446  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  |||| |||||||||||    
T  22477445 gagtgattgctttgcgcttttctttttgaattgttctt 22477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 31369339 - 31369571
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  31369339 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 31369438  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| |||| |||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  31369439 attgaaccactacccacccaagtaattttcatagcttgctctatcggtggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 31369538  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  31369539 attgttttgcgctttcctttcagaattgttctt 31369571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 20 - 246
Target Start/End: Original strand, 19893699 - 19893923
Alignment:
Q  20 actttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaa 119  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| | |||||||||||||    
T  19893699 actttggaacaactcgaacatgaaagttcttctgtgacttttcgagatccaagatgagcttaccaccttcttccatcacacgttctttgcagaaattgaa 19893798  T
Q  120 tcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgtt 219  Q
     ||||  ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  19893799 ccactgtccacccaagtattcttcatagctttctctttcggtggtaatgaggcgacacttatattttc--tgtgtctggtcatcaatgagagtgattgtt 19893896  T
Q  220 ttgtgctttctttttagaattgttctt 246  Q
    ||| |||||| ||||||||| ||||||    
T  19893897 ttgcgctttccttttagaatcgttctt 19893923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 22 - 249
Target Start/End: Original strand, 54793295 - 54793522
Alignment:
Q  22 tttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatc 121  Q
    ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |    
T  54793295 tttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattgaacc 54793394  T
Q  122 acttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgtttt 221  Q
    ||| | |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54793395 actgcgcacctaagtatttttcatagcttgttctttcggaggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagagtgattgtttt 54793494  T
Q  222 gtgctttctttttagaattgttcttaac 249  Q
    | |||||  ||| |||||||||||||||    
T  54793495 gcgcttttctttcagaattgttcttaac 54793522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 11951292 - 11951529
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||| |||||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||||  |||||| ||||||||||| | ||    
T  11951292 agcaaagatcaactttggaacaactcgaacatgcaagttcttcggtgatttttcgaaatcaaagatgagcttaccaacttctttcatcacacgttctttg 11951391  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||    
T  11951392 cagaaattgaatcactgcccaccaaagtatttttcatagctttctctttcggcggtaatgagacgacgcttatattttctctgtgtctggtcatcaatga 11951491  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  11951492 gagtgattgctttgcgcttttcttttagaattgttctt 11951529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 51248293 - 51248062
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  || |||||||| |||||||||| |||||||||||||| |||||| | |||||||||||| |||| |||||||||    
T  51248293 agatctactttggaacaactcgaatgtgaaagttcttctgtgactttttgagatcaaagatgaacttaccacattcttccatcactcgttatctgcagaa 51248194  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  51248193 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttatactgtctctgtgtctggtcatcaatgagagtg 51248094  T
Q  214 attgttttgtgctttctttttagaattgttct 245  Q
    ||||||||| |||||| ||| |||||||||||    
T  51248093 attgttttgcgctttcctttcagaattgttct 51248062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 35088162 - 35088392
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||    
T  35088162 atctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaaat 35088261  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||| | ||| ||||||||||||||||||||||||||    
T  35088262 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatattgtctctgtgtctggtcatcaatgagagtgat 35088361  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||| |||||| ||| | ||||||||||    
T  35088362 tgttttgcgctttcctttcataattgttctt 35088392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 11598286 - 11598518
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||    
T  11598286 agatctacttttgaacaactcgaacatgcaagtacttcggtgacttttcgagatcaaagatgagcttaccaccttcttccattacacgttctttgcagaa 11598385  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||| ||     
T  11598386 attgaaccactttccacccaaatatttttcatagctttctctttcggcagtaatgaggcgacacttatattttctctatgtctggtcatcaatgagggta 11598485  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||  ||||| ||||||| ||||||||    
T  11598486 attgttttgcactttccttttagatttgttctt 11598518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 23193394 - 23193162
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | |||| |||  ||||    
T  23193394 agatctactttggaacaactcgaacgtgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcgctcgttctctatagaa 23193295  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||| ||| ||||||| ||||||||||||||||    
T  23193294 attgaaccactgcccacccaagtatttttcataacttgctcgatcggctgtaatgaggcgacatttatactgtctttgtgtctagtcatcaatgagagtg 23193195  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||| ||||||||||||    
T  23193194 attgttttgcgcttttctttcagaattgttctt 23193162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 49113007 - 49112775
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||||    
T  49113007 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatccaagatgagcttaccaccttcttccatcactcgttatctgcagaa 49112908  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
     ||||| ||||  ||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  49112907 gttgaaccactgtccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttatactgtctttgtgtctggtcatcaatgagagtg 49112808  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||  ||||  ||| ||||||||||||    
T  49112807 attgttttgcacttttctttcagaattgttctt 49112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 52840857 - 52841088
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||    
T  52840857 atctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagattaccaccttcttccatcactcgttctctgcagaaat 52840956  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    ||||  ||| |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||  || | ||||||||||||||||||||||||    
T  52840957 tgaactactgcccacccaagtatttttcatagcttgctctatcggcggtaatgaggtgacaattatactgcctctatgtctggtcatcaatgagagtgat 52841056  T
Q  216 tgttttgtgc-tttctttttagaattgttctt 246  Q
    ||||||| || |||| ||| ||||||||||||    
T  52841057 tgttttgcgcttttcctttcagaattgttctt 52841088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 54512711 - 54512481
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  54512711 agatctaccttggaacaactcgaacgtgcaagttcttctatgacttttcgagatcaaagatgagcttaccaccttcttccatcattcgttctctgcagaa 54512612  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||  ||  ||||||||||||||||||||| ||    
T  54512611 attgaaccactacccacccaagtatttttcatagcctgctctatcggcggtaatgaggcgacagttataccgtc--tgtgtctggtcatcaatgagaatg 54512514  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||  |||||| ||| ||||||||||||    
T  54512513 attgttttacgctttcctttcagaattgttctt 54512481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 6104448 - 6104680
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||    
T  6104448 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatttgcagaa 6104547  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| |||| |||||||||  |||| || |||| ||| ||| |||||| |||||||||||||    
T  6104548 attgaaccactgcccacccaagtaattttcatagcttgctctatcggtggtaatgagatgacagttctactgtctctgtatctggttatcaatgagagtg 6104647  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  6104648 attgttttgcgctttcctttcagaattgttctt 6104680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 50741285 - 50741053
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  50741285 agatctactttggaacaactcgaatttgcaagttcttctgtgaattttcgagatcaaagatgagcttaccaccttcttccatcactcattatctgcagaa 50741186  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| | ||||||||||||| |||| ||||||| ||| | | ||||||||||||||||||||    
T  50741185 attgaaccactgcccacccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtctttatatctggtcatcaatgagagtg 50741086  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||  |||||| ||| ||||||||||||    
T  50741085 attgttttacgctttcctttcagaattgttctt 50741053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 50771569 - 50771801
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  50771569 agatctactttggaacaactcgaatttgcaagttcttctgtgatttttcgagatcaaagatgagcttaccaccttcttccatcactcattctctgcagaa 50771668  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| | ||||||||||||| |||| ||||||| ||| | | ||||||||||||||||||||    
T  50771669 attgaaccactgcccacccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtctttatatctggtcatcaatgagagtg 50771768  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||  |||||| ||| ||||||||||||    
T  50771769 attgttttacgctttcctttcagaattgttctt 50771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 2845179 - 2845408
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||| |||||| ||||||||||| | |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||  |||||    
T  2845179 agatatacttttgaacaactcgatcgtgcaagttcttcggtgactttttgagatcaaagatgagcttaccaccttcttccatcacacgttctcgacagaa 2845278  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2845279 attgaaccactgcccatccaagtttttttcatagcttgctctatcgggggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagagtg 2845378  T
Q  214 attgttttgtgctttctttttagaattgtt 243  Q
    ||| ||||| |||||| |||  ||||||||    
T  2845379 attattttgcgctttcctttcggaattgtt 2845408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 16495827 - 16495590
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||| || ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  16495827 agcaaagatatattttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctg 16495728  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||| || |||| | | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  16495727 cagaaattaaaccactgcgc-ccctagtatttttcatagcttgctctttcggaggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 16495629  T
Q  209 gagtgattgttttgtgctttctttttagaattgttcttaa 248  Q
    |||||||| ||||| |||||  ||| ||||||||||||||    
T  16495628 gagtgatt-ttttgcgcttttctttcagaattgttcttaa 16495590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 52853766 - 52853996
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||  ||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||| |||| |||| ||||||    
T  52853766 atctactttggaacaactcgaatttgcaagttcttctgcgacttttcaagatcaaagatgagcttaccaccttcttccatcactcgttatctgtagaaat 52853865  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| |||| |||||||||||| ||||||| ||||||||| ||||| ||||||||| |||| ||||||| ||| ||||||||  |||||| |||||||||    
T  52853866 tgaaccactgcccacccaagtaattttcatggcttgctctatcggctgtaatgaggtgacagttatactgtctctgtgtctgcccatcaaagagagtgat 52853965  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||| |||||| ||| | ||||||||||    
T  52853966 tgttttgcgctttcctttcaaaattgttctt 52853996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 48976616 - 48976385
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||    
T  48976616 agatctactttggaacaactcgaatttgcaacttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttt-ctgcagaa 48976518  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||  ||| |||||||||||| |||||||||| |||||| ||||||||||| ||| |||| ||||| | ||  ||||||||||||||||||||||||    
T  48976517 attgaacgactgcccacccaagtaattttcatagcctgctctatcggcggtaataaggtgacaattatattgtccttgtgtctggtcatcaatgagagtg 48976418  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||  |||||| ||| | ||||||||||    
T  48976417 attgttttccgctttcctttcataattgttctt 48976385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 21699897 - 21700124
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||  || |||||||||||||| |||| |||||||||||    
T  21699897 atctactttggaacaactcgaatttgcaagtttttctgtgacttttcgagatcaaagatgagct--ccaccttcttccatcactcgttatctgcagaaat 21699994  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| ||||||||||||||||| |||||||||||||| || || ||||||| |||| |||| ||||||| ||| |  |||||||||||||||||||||||    
T  21699995 tgaaccacttcccacccaagtaattttcatagcttgccctatc-gcggtaaagaggtgacagttatactgtctctaagtctggtcatcaatgagagtgat 21700093  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||| |||||| ||| | ||||||||||    
T  21700094 tgttttgcgctttcctttcaaaattgttctt 21700124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 11325966 - 11326196
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||  |||||||||||  ||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||||| |||| ||||| |||    
T  11325966 agatctactttcaaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagataagcttatcaccttcttccatcactcgttatctgctgaa 11326065  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||||||||||||||| |||| |||||||||||| ||| ||||||||||| || | |||||  || | ||||||||||||||||||||||||    
T  11326066 attgaaccacttcccacccaagtaattttgatagcttgctctatcgacggtaatgaggtgatagttata--ttgtttgtgtctggtcatcaatgagagtg 11326163  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| | |||| ||| | ||||||||||    
T  11326164 attgttttgcgttttcctttcaaaattgttctt 11326196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 32755423 - 32755262
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||    
T  32755423 agcaaagatgtactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatctg 32755324  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  32755323 cagaaattgaatcactgtccacccaagtatttttcatagcttgctctttcggcggtaatgag 32755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 5252698 - 5252870
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||| ||| |||||||||||    
T  5252698 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacatgttctctgcagaaat 5252797  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5252798 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 5252870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 36165333 - 36165488
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  |||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||    
T  36165333 agatctactttggaacaactcgaatgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctatgctaaa 36165432  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatga 169  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  36165433 attgaaccactacccacccaagtatttttcatagcttgctctttcggtggtaatga 36165488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 39796797 - 39796969
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||| ||||    
T  39796797 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcataaat 39796896  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  39796897 tgatccatagcccacccaagtatttttcatagcctgctctttcggcggtaatgaggcaacacttatactttct 39796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 35436774 - 35436662
Alignment:
Q  68 caaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaat 167  Q
    |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  35436774 caaagatgagcttaccaccttcttccatcacacgttctctgctgaaattgaaccactacccacccaaatatttttcatagcttgctctttcggcggtaat 35436675  T
Q  168 gaggcgacactta 180  Q
    |||||||||||||    
T  35436674 gaggcgacactta 35436662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 52463249 - 52463387
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| ||||||||| |  | ||||||||||||||||  ||||||||||| ||||||||| |||||| || | ||    
T  52463249 agcaaagatctactttggaacaactcgaacgtgcaagttcatcagcgacttttcgagatcaataatgagcttaccaccttcttccttcacactttctttg 52463348  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatag 147  Q
    ||||||||||| ||||  |||||||||||||||||||||    
T  52463349 cagaaattgaaccactgtccacccaagtatttttcatag 52463387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 11382988 - 11382869
Alignment:
Q  127 ccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgct 226  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| | ||||||||||||||| ||  ||||||||||| |||    
T  11382988 ccacccaagtatttttcatagcttgctctttcggcggtaatgctgcgacacttatattttctttatgtctggtcatcaattaggttgattgttttgcgct 11382889  T
Q  227 ttctttttagaattgttctt 246  Q
    ||| ||| ||| || |||||    
T  11382888 ttcctttcagattttttctt 11382869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 36167933 - 36168005
Alignment:
Q  172 cgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||  ||| ||||||||||||    
T  36167933 cgacacttatactttctctgt--ctggtcatcaatgagagtgattgttttgcgcttttctttcagaattgttctt 36168005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 44073200 - 44073275
Alignment:
Q  171 gcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||| | ||| || |||||||||||||| ||| ||||| |||||| ||| ||||||||||||    
T  44073200 gcgacacttatactttctctatgtttgttcatcaatgagagtaattattttgcgctttcctttcagaattgttctt 44073275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 918449 - 918371
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||| |||||||||||||| | | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  918449 gaggtgacacttatactttttctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 918371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 11383048 - 11383015
Alignment:
Q  17 tctactttggaacaactcgaacatgcaagttctt 50  Q
    |||||||||||||||||||||| |||||||||||    
T  11383048 tctactttggaacaactcgaacgtgcaagttctt 11383015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 23936965 - 23936884
Alignment:
Q  127 ccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||| ||||| |||||||  |||||||| || |||||||| | ||||||||||||||| || || || |||||||| ||||    
T  23936965 ccacctaagtacttttcatgacttgctctctccgcggtaatcaagcgacacttatacttcctttgagtttggtcatcgatga 23936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 52309769 - 52309543
Alignment:
Q  20 actttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaa 119  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||    
T  52309769 actttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaaattgaa 52309670  T
Q  120 tcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgtt 219  Q
     ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  52309669 acactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctttgtgtctggtcatcaacgagagtgattgtt 52309570  T
Q  220 ttgtgctttctttttagaattgttctt 246  Q
    |||||||||| ||||||||||||||||    
T  52309569 ttgtgctttccttttagaattgttctt 52309543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 31619630 - 31619398
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  31619630 agatctactttggaacaactcgaacttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 31619531  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  31619530 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatactgtctctgtgtctggtcatcaatgagagtg 31619431  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  31619430 attgttttgcgctttcctttcagaattgttctt 31619398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 29840991 - 29841228
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||| ||||||||||||||||||| | ||    
T  29840991 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgatttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttg 29841090  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  29841091 cagaaattgaatcactgcccacccaagtatttttcatagttttctctttcgacggtaatgagacgacacttatattttctctgtgtctggtcatcaatga 29841190  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  29841191 gagtgattgctttgcgcttttcttttagaattgttctt 29841228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 18814160 - 18813928
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  18814160 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 18814061  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  18814060 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 18813961  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  18813960 attgttttgcgctttcctttcagaattgttctt 18813928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 34687528 - 34687296
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  34687528 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 34687429  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  34687428 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 34687329  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  34687328 attgttttgcgctttcctttcagaattgttctt 34687296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 10763328 - 10763091
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||| | ||    
T  10763328 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttg 10763229  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
     ||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |    
T  10763228 tagaaattgaatcactgcccacccgagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctctgtgtctggtcatcaatta 10763129  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  10763128 gagtgattgctttgcgcttttcttttagaattgttctt 10763091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 15315196 - 15314959
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| ||||| |||||   ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  15315196 agcaaagatctattttggaacaactcgaacgtgcaaattcttcgatgacttttcgagatcaaagatgagctttccaccttcttccatcacacgttctctg 15315097  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
     |||||||||| || | |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  15315096 tagaaattgaaccaatgcccacctaagtatttttcatagcttgctctttcggcggtaatgacgcgacacttatactttctctgtgtctggtcatcaatga 15314997  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||  ||| ||||||||||||    
T  15314996 gagtgattgttttgcgcttttctttcagaattgttctt 15314959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 51966042 - 51966274
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||    
T  51966042 agatctactttggaaaaactcgaacatgcaatttcttcggtgacttttcgagatcaaagatgagcttaccacctt-ttccatcacacgttctttgcagaa 51966140  T
Q  114 attgaatcacttcccaccc-aagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagt 212  Q
    |||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  51966141 attgaaccactgcccaccccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatgagagt 51966240  T
Q  213 gattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||| |  ||| ||||||||||||||||    
T  51966241 gattgttttgcgtattccttttagaattgttctt 51966274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 34692056 - 34691824
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||    
T  34692056 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaa 34691957  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||||||||||||||| ||||||||||||||||| | || |||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  34691956 attgaaccacttcccacccaagtaattttcatagcttgctctattggtggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 34691857  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  34691856 attgttttgcgctttcctttcagaattgttctt 34691824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 42682332 - 42682099
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||| | ||||    |||||||||| ||||||||||||||||||| | ||    
T  42682332 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcaaaatca----tgagcttaccaccttcttccatcacacgttctttg 42682237  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  42682236 cagaaattgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctctgtgtctggtcatcaatga 42682137  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  42682136 gagtgattgctttgcgcttttcttttagaattgttctt 42682099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 38845533 - 38845765
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| || | |||||||||    
T  38845533 agatctactttggaataactcgaatttgcaagttcttctgtgacttttcgagatcagagatgagcttaccaccttcttccatcactcgctatctgcagaa 38845632  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||||||||||||||| |||| |||||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||||||||||||||||    
T  38845633 attgaaccacttcccacccaagtaatttttatagcttgctctatcggcggtaatgaggtgacagttatacagtctctgtgtctggtcatcaatgagagtg 38845732  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| |||||| |||||    
T  38845733 attgttttgcgctttcctttcagaattattctt 38845765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 41830358 - 41830590
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||    
T  41830358 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcataa 41830457  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||  | | |||||||||||| ||||||||||||||| | ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  41830458 attgaactagtgcccacccaagtaattttcatagcttgctgtatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 41830557  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  41830558 attgttttgcgctttcctttcagaattgttctt 41830590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 41963239 - 41963471
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||    
T  41963239 agatctactttggaacaaatcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaactccttcttccatcactctttatctgcagaa 41963338  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||| ||||||| ||||||||||||||  |||| ||||||| ||||| |||||||| |||||||||||||    
T  41963339 attgaaccactgcccacccaagtaattttcatagtttgctctatcggcggtaatgagatgacagttatactgtctatatgtctggttatcaatgagagtg 41963438  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  41963439 attgttttgcgctttcctttcagaattgttctt 41963471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 52521877 - 52522109
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| || || |||||||||||||| |||| |||||||||    
T  52521877 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttgccaccttcttccatcactcgttatctgcagaa 52521976  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||  |||| |||||||||  |||| ||| ||| ||| ||||||||||||||||||||||||    
T  52521977 attgaaccactgcccacccaagtaattttcatagcttgctccatcggtggtaatgagatgacagttacactgtctctgtgtctggtcatcaatgagagtg 52522076  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  52522077 attgttttgcgctttcctttcagaattgttctt 52522109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 249
Target Start/End: Complemental strand, 12714410 - 12714183
Alignment:
Q  22 tttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatc 121  Q
    ||||||||| ||||||| |||||||||||   | | |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |    
T  12714410 tttggaacagctcgaacgtgcaagttcttcgataaattttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattgaacc 12714311  T
Q  122 acttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgtttt 221  Q
    ||| | |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12714310 actgcgcacctaagtatttttcaaagcttgctctttcggaggtaatgaggcgacacttatactttctttgtgtctggtcatcaatgagagtgattgtttt 12714211  T
Q  222 gtgctttctttttagaattgttcttaac 249  Q
    | | |||  ||| ||||||||| |||||    
T  12714210 gcgattttctttcagaattgtttttaac 12714183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 249
Target Start/End: Original strand, 28566023 - 28566263
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||| || ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  28566023 agcaaagatatattttggaacagctcgaacgtgcaagttcttcaataacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctg 28566122  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
     ||||| |||| |||| | |||| || |||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  28566123 aagaaactgaaccactgcacacctaattatttttcatagcttgatctttcggaggtaatgaggcgacacttatactttttctgtgtctggtcatcaatga 28566222  T
Q  209 gagtgattgttttgtgctttctttttagaattgttcttaac 249  Q
    |||||||||||||| |||||  ||| |||||||||||||||    
T  28566223 gagtgattgttttgcgcttttctttcagaattgttcttaac 28566263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 48340270 - 48340038
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||| |||||||||||| ||||||||||| | |||||||| |||||||||||||| |||||| |||||||||||||| |||| |||||||||    
T  48340270 agatctactttgaaacaactcgaacgtgcaagttcttctatgactttttgagatcaaagatgaacttaccaccttcttccatcactcgttctctgcagaa 48340171  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| | |||||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  48340170 attgaaccactgctcacccaagtatttttcatagcttgctcgatcggctgtaatgtggcgacagttatactgtctctgtgtctggtcatcaatgagagtg 48340071  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| | |||| ||| | ||||||||||    
T  48340070 attgttttgcgttttcctttcataattgttctt 48340038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 13662710 - 13662947
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||| || ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  13662710 agcaaagatatattttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctg 13662809  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||| || |||| | | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13662810 cagaaattaaaccactgcgc-ccctagtatttttcatagcttgctctttcggaggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 13662908  T
Q  209 gagtgattgttttgtgctttctttttagaattgttcttaa 248  Q
    |||||||| ||||| |||||  ||| ||||||||||||||    
T  13662909 gagtgatt-ttttgcgcttttctttcagaattgttcttaa 13662947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 50560988 - 50560751
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||| |||||||||| ||||||||||||||   ||| |||||||||||||||||||| |||||  |||||||||||||||||| | ||    
T  50560988 agcaaagatctactttagaacaactcggacatgcaagttcttcgctgaattttcgagatcaaagatgagtttaccatcttcttccatcacacgttctttg 50560889  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||| |||| ||||     
T  50560888 cagaaattgaaccactgcccactcaagtatttttcatagctttctctttcgggggtaatgaggcgacacttatattttctctgtgtctgatcattaatgg 50560789  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
     |||| || ||||| |||||| ||||||||||||||||    
T  50560788 cagtgtttattttgcgctttccttttagaattgttctt 50560751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 18111525 - 18111353
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  18111525 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 18111426  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18111425 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 18111353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 43254996 - 43255168
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  43254996 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 43255095  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43255096 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 43255168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 50395410 - 50395582
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  50395410 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 50395509  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50395510 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 50395582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 16031914 - 16032070
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  16031914 agatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaa 16032013  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
    |||||| || | | | ||||| ||||||||||||||||||||||||| |||||||||    
T  16032014 attgaaccattgctcgcccaaatatttttcatagcttgctctttcggtggtaatgag 16032070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 45004679 - 45004518
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  45004679 agcaaagatctactttggaacaacttgaacgtgcaagttctttggtgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttctctg 45004580  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
     |||||||||| || |  |||||||| ||||||||||||||||||||||||| |||||||||    
T  45004579 tagaaattgaaccattgtccacccaactatttttcatagcttgctctttcggtggtaatgag 45004518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 36681190 - 36681029
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||| || |    
T  36681190 agcaaagatctactttggaacaacttgaacgtgcaagttcttcggtgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttctccg 36681091  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
     |||||||||| || | ||||||||| ||||||||||||||||||||||||| |||||||||    
T  36681090 tagaaattgaaccattgcccacccaactatttttcatagcttgctctttcggtggtaatgag 36681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 17671252 - 17671092
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||  |||||||||| ||||||||||||||||||| ||||    
T  17671252 agcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagataaaatgtgagcttaccaccttcttccatcacacgttctctg 17671153  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
      ||||||||| || | ||||||||||||||||||||||||||||||||||| | |||||||    
T  17671152 -tgaaattgaaccattgcccacccaagtatttttcatagcttgctctttcggtgttaatgag 17671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 12246150 - 12246236
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacac 100  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12246150 agatctacttttgaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacac 12246236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 44406316 - 44406227
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  |||||||| || |||||||||||||||||||| ||||| ||||| | |||||||||||| ||||    
T  44406316 agatctactttggaacaactcgaatttgcaagttattctgtgacttttcgagatcaaatatgagtttaccacgttcttccatcactcgtt 44406227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 24294468 - 24294394
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttct 90  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||    
T  24294468 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttct 24294394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 4891869 - 4891827
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  4891869 aatgagagtgattgttttgcgctttccttttagaattgttctt 4891827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 29186618 - 29186660
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  29186618 aatgagagtgattgttttgcgctttccttttagaattgttctt 29186660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 33361472 - 33361430
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  33361472 aatgagagtgattgttttgcgctttccttttagaattgttctt 33361430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 13253 - 13485
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||    
T  13253 agatctactttggaacaactcgaacatgcaagttcttcagtgacttttcgagattaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 13352  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    ||||||  ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13353 attgaacaactgctcacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatgagagtg 13452  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  13453 attgttttgcgctttccttttagaattgttctt 13485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 6e-89; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 12588595 - 12588832
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||| | |||||||||||||||||| ||||||||||||||||||| | ||    
T  12588595 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcaaaatcaaagatgagcttaccaccttcttccatcacacgttctttg 12588694  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  12588695 cagaaattgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctctgtgtctggtcatcaatga 12588794  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  12588795 gagtgattgctttgcgcttttcttttagaattgttctt 12588832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 1852252 - 1852482
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  1852252 atctactttggaacaactcgaatttgcaagttcttatgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaaat 1852351  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||||||||||| |||| ||||||| ||| ||||||||| ||||||||||||||||    
T  1852352 tgaatcactgcccacccaagtaattttcatagcttgctctatcagcggtaatgaggtgacagttatactgtctctgtgtctggccatcaatgagagtgat 1852451  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| ||| ||||||||||||    
T  1852452 tgttttgtgctttcctttcagaattgttctt 1852482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 3150924 - 3151159
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  3150924 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactctttatctgcagaa 3151023  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||  ||||||||||||||| |||  ||||||| ||| ||||||||||||||||||||||||    
T  3151024 attgaaccactgcccacccaagtaattttcatagcttgctccatcggcggtaatgaggtgacgattatactgtctctgtgtctggtcatcaatgagagtg 3151123  T
Q  214 attgttttgtgctttctttttagaattgttcttaac 249  Q
    ||||||||| |||||| ||| |||||||||||||||    
T  3151124 attgttttgcgctttcctttcagaattgttcttaac 3151159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 9702156 - 9701919
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  9702156 agcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccatcttcttccatgacacgttctctg 9702057  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9702056 cagaaattgaaccactgcccatccaagtatttttcatagcatgctcttttggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 9701957  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||  ||| ||||||||||||    
T  9701956 gaatgtttgttttgcgcttttctttcagaattgttctt 9701919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 7285576 - 7285344
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  7285576 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 7285477  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| |||||| |||||||  |||  ||||||| ||| ||||||||||||||||||||||||    
T  7285476 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgactgttatactgtctctgtgtctggtcatcaatgagagtg 7285377  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  7285376 attgttttgcgctttcctttcagaattgttctt 7285344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 21030007 - 21029775
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  21030007 agatctactttggaacaactcgaacttgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 21029908  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| |||||||||||||| || |||| |||||||||| |||| ||||| | ||| ||||||||||||||||||||||||    
T  21029907 attgaaccactacccacccaagtaattttcatagcttgcactatcggtggtaatgaggtgacagttatattgtctctgtgtctggtcatcaatgagagtg 21029808  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||| |||| |||||| ||| ||||||||||||    
T  21029807 attgatttgcgctttcctttaagaattgttctt 21029775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 2195064 - 2194832
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||| |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||||    
T  2195064 agatctacttcggaacaactcgaatttgcaagttcttctgtgacttttcgagatccaagatgagcttaccaccttcttccatcactcgttatctgcagaa 2194965  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||  |||||| |||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  2194964 attgaaccactacccacccaagtaattttcatagcttgctccatcggcgataatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 2194865  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  2194864 attgttttgcgctttcctttcagaattgttctt 2194832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 3397458 - 3397690
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  3397458 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 3397557  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| |||| |||||||||||| |||| |||||||||| |||  ||||| | ||| ||||||||||||||||||||||||    
T  3397558 attgaaccactgcccacccaagtaattttgatagcttgctctatcggtggtaatgaggtgaccgttatattgtctctgtgtctggtcatcaatgagagtg 3397657  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| | ||||||||||    
T  3397658 attgttttgcgctttcctttcaaaattgttctt 3397690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 33611460 - 33611689
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||    
T  33611460 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaa 33611559  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||| ||||||| ||||||||||||||||| | || |||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  33611560 attgaaccactgcccatccaagtaattttcatagcttgctctattggtggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 33611659  T
Q  214 attgttttgtgctttctttttagaattgtt 243  Q
    ||||||||| |||||| ||| |||||||||    
T  33611660 attgttttgcgctttcctttcagaattgtt 33611689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 4882172 - 4881940
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||| ||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  4882172 agatctaatttggaacaactcgaattttcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 4882073  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    || ||| || |  ||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||| | ||| ||||||||||| ||||||||||||    
T  4882072 atcgaaccattgaccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctctgtgtctggtcgtcaatgagagtg 4881973  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||| ||| ||||||||||||    
T  4881972 attgttttgtgctttcctttcagaattgttctt 4881940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 20349822 - 20349590
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||| ||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  20349822 agatctattttggaacaactcaaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttctatcactcgttctctgcagaa 20349723  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| | ||||||||||||| |||| ||||| | ||| | | ||||||||||||||||||||    
T  20349722 attgaaccactgcccacccaagtaattttcatagcttgctctattggcggtaatgaggtgacaattatattgtctctatatctggtcatcaatgagagtg 20349623  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  20349622 attgttttgcgctttccttttagaattgttctt 20349590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 20996264 - 20996496
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||    
T  20996264 agatctacgttggaacaactcgaacgtgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatttgcagaa 20996363  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||| ||||| ||||||||| ||||||| | ||||||||||||| |||| ||||| | ||| ||||||||||||||||||||||||    
T  20996364 attgaaccactgcccacctaagtaattttcatagtttgctctattggcggtaatgaggtgacagttatattgtctctgtgtctggtcatcaatgagagtg 20996463  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    || |||||| |||||| ||| ||||||||||||    
T  20996464 atagttttgcgctttcctttcagaattgttctt 20996496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 10513421 - 10513614
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||    
T  10513421 agatctactttggaacaactcgaatttgcaagttcttttgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttctctgcaaaa 10513520  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatg 207  Q
    |||||| |||| |||||||||||||||||||||||||||||| | ||||||||||||| |||| ||||||| ||| ||||||||||||||||||    
T  10513521 attgaaccactgcccacccaagtatttttcatagcttgctctcttggcggtaatgaggtgacagttatactgtctctgtgtctggtcatcaatg 10513614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 26321395 - 26321627
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  | ||||||||| | |||||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  26321395 agatctactttggaacaactcgaatttccaagttcttctatgacttttcgggatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 26321494  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| ||||||||| || |||||||||| ||| || ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  26321495 attgaaccactgcccacccaaataattttcatagcgtgcactatcggcggtaatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtg 26321594  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  26321595 attgttttgcgctttcctttcagaattgttctt 26321627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 30689206 - 30688976
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||  ||||  ||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||    
T  30689206 atctactttggaacaactcgaatttgcactttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgcagaaat 30689107  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| ||||  ||||||||||| ||||||||||||||||| ||||||||||||||  |||| || |||| ||| ||||||||||||||||| ||||||||    
T  30689106 tgaaccactgaccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttgtactgtctctgtgtctggtcatcaataagagtgat 30689007  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||| |||||| ||| ||||||||||||    
T  30689006 tgttttgcgctttcctttcagaattgttctt 30688976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 19447902 - 19447668
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||| | |||||||||||||| |||| ||||| |||    
T  19447902 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgaaatcaaagatgagcttatcaccttcttccatcactcgttatctgccgaa 19447803  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| |||| |||||||||||| ||||||||||||||| | || ||||||| ||| |||||| |||||||||||||||||    
T  19447802 attgaaccactgcccacccaagtaattttgatagcttgctctatcggcggtaatgaggtggcagttatactgtctctgtgtcgggtcatcaatgagagtg 19447703  T
Q  214 at--tgttttgtgctttctttttagaattgttctt 246  Q
    ||  ||||||| |||||| ||| ||||||||||||    
T  19447702 attgtgttttgcgctttcctttcagaattgttctt 19447668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 249
Target Start/End: Original strand, 3210515 - 3210753
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||| ||||| ||||||||||| |||||||||||   |||||||| ||||||||||||||||||||| | |||||||||||   ||| ||||    
T  3210515 agcaaagatctattttgggacaactcgaacgtgcaagttcttcgatgactttttgagatcaaagatgagcttaccacattcttccatcat--gttctctg 3210612  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  3210613 cagaaattgaaccactgcccacccaagtatttttcatagcttactctttcagcggcaatgaggcgacacttatactttctctgtgtttggtcatcaatga 3210712  T
Q  209 gagtgattgttttgtgctttctttttagaattgttcttaac 249  Q
    |||||||||||||| |||||  ||| | |||| ||||||||    
T  3210713 gagtgattgttttgcgcttttctttcataatttttcttaac 3210753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 290453 - 290275
Alignment:
Q  68 caaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaat 167  Q
    |||||||||||||||| ||||||||||||||| ||| ||||| ||||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||    
T  290453 caaagatgagcttaccaccttcttccatcacatgttctctgctgaaattgaaccactggccacccaaatatttttcatagcttgctctttcggcggtaat 290354  T
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||  ||| ||||||||||||    
T  290353 gaggcgacacttatactttctctgtgtctggtcatcaatgagagtgcttgttttacgcttttctttcagaattgttctt 290275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 3028647 - 3028418
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    |||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||    
T  3028647 atctactttgtaacaactcgaatttgcaagttcttctgtg-cttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcaaaaat 3028549  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtc--tggtcat-caatgagagt 212  Q
    |||| |||| |||||||||||| |||||||| |||||||| ||||||||||||||| |||| ||||||| ||||||||||  ||   || ||||||||||    
T  3028548 tgaaccactccccacccaagtaattttcataacttgctctatcggcggtaatgaggtgacaattatactgtctatgtgtctatgcgaatacaatgagagt 3028449  T
Q  213 gattgttttgtgctttctttttagaattgtt 243  Q
    |||||||||| |||||| ||| |||||||||    
T  3028448 gattgttttgcgctttcctttcagaattgtt 3028418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 31295996 - 31296168
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  31295996 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 31296095  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31296096 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 31296168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 27065797 - 27065569
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||| |||||||||||  || || ||||| ||||||||||||||||||||||||  |||||| |||||||||||||| |||| |||||||||    
T  27065797 agatctactttgcaacaactcgaatttgtaaattcttctgtgacttttcgagatcaaagatg--cttaccaccttcttccatcactcgttatctgcagaa 27065700  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  ||||||||||| ||||| ||||||||| | |||| | |||||||| |||| ||||||| ||| |||||||||||||||||||||  |    
T  27065699 attgaaccactgtccacccaagtaattttcgtagcttgctttatcggtgataatgaggtgacagttatactgtctctgtgtctggtcatcaatgaga--g 27065602  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    |||| |||| |||||| ||| ||||||||||||    
T  27065601 attgctttgcgctttcctttcagaattgttctt 27065569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 19395260 - 19395081
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||| |||||||| |||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||  | ||    
T  19395260 agcaaagatctactttagaacaacttgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgtgctttg 19395161  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    ||||||||||  ||   |||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  19395160 cagaaattgatccatagcccacccaagtattttccatagcttgctctttctgcggtaatgaggcgacgcttatactttct 19395081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 41780727 - 41780569
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| ||| |||||||   |||||||||||||| ||||||||||||||| |||| |||||||||||| | ||| |||||    
T  41780727 agatctactttggaacaactcgaacgtgctagttcttcgatgacttttcgagataaaagatgagcttaccaccttattccatcacacgctctctccagaa 41780628  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggc 172  Q
    |||||| || |  ||||| ||||||||||||||| |||||||||||| |||||||||||    
T  41780627 attgaaccattgtccaccaaagtatttttcatagtttgctctttcggtggtaatgaggc 41780569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 287341 - 287447
Alignment:
Q  61 tcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcgg 160  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||||||| ||||||||     
T  287341 tcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattgaaccactgccctcccaaatatttttcatagctttctctttcgt 287440  T
Q  161 cggtaat 167  Q
    |||||||    
T  287441 cggtaat 287447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 33929693 - 33929607
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacac 100  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33929693 agatctacttttgaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacac 33929607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 17996479 - 17996390
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  17996479 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagtttaccaccttcttccatcactcgtt 17996390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 20757860 - 20757771
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||| |||||| ||||||| |||||| ||||    
T  20757860 agatctactttggaacaactcgaatttgcaagttcttatgtgacttttcgagatcaaatatgatcttaccaccttctttcatcactcgtt 20757771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 38934376 - 38934287
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  ||||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  38934376 agatctactttggaacaactcgaatttgcaatttcttctatgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtt 38934287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 37464129 - 37464051
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| | | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  37464129 gaggcgacacttatactttttctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 37464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 34717359 - 34717314
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttcttaac 249  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  34717359 aatgagagtgattgttttgcgctttccttttagaattgttcttaac 34717314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 30142273 - 30142230
Alignment:
Q  203 caatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  30142273 caatgagagtgattgttttgcgctttccttttagaattgttctt 30142230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 25697033 - 25697075
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  25697033 aatgagagtgattgttttgcgctttccttttagaattgttctt 25697075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 41691045 - 41691003
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  41691045 aatgagagtgattgttttgcgctttccttttagaattgttctt 41691003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 35707960 - 35708197
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||    
T  35707960 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcataccaccttcttccatcacacgttctttg 35708059  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  35708060 cagaaattgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctctgtgtctggtcatcaatga 35708159  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  35708160 gagtgattgctttgcgcttttcttttagaattgttctt 35708197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 40622104 - 40621868
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | ||    
T  40622104 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgag-ttaccaccttcttccatcacatgttctgtg 40622006  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| ||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  40622005 cagaaattgaaacactgtccacccaagtatttttcataactttctctttcggcggtaatgaggcgacacttatattttctctgtgtctggtcatcaatga 40621906  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  40621905 gagtgattgttttgcgctttccttttagaattgttctt 40621868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 3839703 - 3839940
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| || ||||| ||  |||| ||||| |||||||||||||||||||| ||||||||||||||||| | ||||    
T  3839703 agcaaagatctactttggaacaactcgaacgtggaagtttttcggtgaattttccagatcaaagatgagcttaccaccttcttccatcacacgctctctg 3839802  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||||    
T  3839803 cagaaattgaaccactgcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatgctttctttgtgtctgataatcaatga 3839902  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||  ||| ||||||||||||    
T  3839903 gagtgattgttttgcgcttttctttcagaattgttctt 3839940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 23478862 - 23478630
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||    
T  23478862 agatctactttggaacaactcgaatttgcaagttcttttgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcataa 23478763  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| | |||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||| ||    
T  23478762 attgaaccactgctcacccaagtaattttcatagcttgctctatcggcggtaatgagatgacatttatactgtctctgtgtctggtcatcaatgagaatg 23478663  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  23478662 attgttttgcgctttcctttcagaattgttctt 23478630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 33503335 - 33503567
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||| | |||||||||||||| |||| |||||||||    
T  33503335 agatctactttggaacaactcgaatttgcaagttcttatgtgacttttcgaaatcaaagatgagcttatcaccttcttccatcactcgttatctgcagaa 33503434  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  33503435 attgaaccactgcccacccaagtaattttcgtagcttgctctatcggcggtaatgaggtgacagttatactttctctgtgtctggtcatcaatgagagtg 33503534  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| | ||||||||||    
T  33503535 attgttttgcgctttcctttcaaaattgttctt 33503567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 34056900 - 34057132
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  34056900 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 34056999  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| |||||||||| |||||||||||||    
T  34057000 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctctgtgtctggttatcaatgagagtg 34057099  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| | ||||||||||    
T  34057100 attgttttgcgctttcctttcataattgttctt 34057132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 55999034 - 55999266
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  55999034 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttctatcactcgttatctgcagaa 55999133  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||||||||||||    
T  55999134 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttataatgtctctgtgtctggtcatcaatgagagtg 55999233  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||| ||||| |||||| ||| ||||||||||||    
T  55999234 attattttgcgctttcctttcagaattgttctt 55999266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 1944444 - 1944236
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||| |||||| |||||| ||| |||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1944444 agatctattttggatcaactcaaacgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttttctgcagaa 1944345  T
Q  114 a-ttgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagt 212  Q
    | ||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1944344 aattgaaccactgccaaccaaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagagt 1944245  T
Q  213 gattgtttt 221  Q
    |||||||||    
T  1944244 gattgtttt 1944236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 36857040 - 36856808
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| |||| |||||||||    
T  36857040 agatctactttggaacaactcgaatttgcaagttcttttgtgacttttcgatatcaaagatgagcttaccactttcttccatcactcgttatctgcagaa 36856941  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| | || |||||||  || |||||| |||||||||||||||||    
T  36856940 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtggcagttatactgactctgtgtcaggtcatcaatgagagtg 36856841  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  36856840 attgttttgcgctttcctttcagaattgttctt 36856808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 39743083 - 39743315
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||    
T  39743083 agatctactttggaacaacttaaatttgcaagttcttttgtgacttttcgagatcaaagatgagcttaccaccttcttccaccactcgttatctgcagaa 39743182  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||| ||||| |||||||| |||||||| ||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  39743183 attgaaccactgcccacctaagtaattttcataacttgctctatcggcggtaatgaggtgacagttatactgtctctgtgtctggtcatcaatgagagtg 39743282  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  39743283 attgttttgcgctttcctttcagaattgttctt 39743315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 14829850 - 14830080
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  14829850 atctactttggaacaactcgaacttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttctcccatcactcgttatctgcagaaat 14829949  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| |||| |||||||||||| ||||||||||||||||| |||||| |||||||  |||| ||||||| ||| ||||||||||||||||||||||||||    
T  14829950 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgacaattatactgtctctgtgtctggtcatcaatgagagtgat 14830049  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||  |||||| ||| ||||||||||||    
T  14830050 tgttttacgctttcctttcagaattgttctt 14830080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 54331980 - 54332198
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  54331980 agatctactttggaacaactcgaatttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 54332079  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||    
T  54332080 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatactgtctctgtgtctggtcatcaatgagagtg 54332179  T
Q  214 attgttttgtgctttcttt 232  Q
    ||||||||| |||| ||||    
T  54332180 attgttttgcgcttccttt 54332198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 574479 - 574715
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||| ||||||||||||||| ||| | ||    
T  574479 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgatttttcgaaatcaaagatgagcttaccaccttcttccatcacatgttctttg 574578  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||||||||||| ||||||||||||||||||||||||| || |||||||| | ||||| ||||||||||| ||||| | |||||||||||||||||    
T  574579 cagaaattgaatcactgcccacccaagtatttttcatagctttctatttcggcgat-atgagacgacacttatattttctctatgtctggtcatcaatga 574677  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||| |||||  ||||||||||||||||    
T  574678 gagtgattgctttgcgcttttcttttagaattgttctt 574715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 30 - 246
Target Start/End: Original strand, 26870637 - 26870853
Alignment:
Q  30 aactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttccca 129  Q
    ||||||||  |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  26870637 aactcgaatgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 26870736  T
Q  130 cccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttc 229  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||     
T  26870737 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagaatgtttgttttgcgctttt 26870836  T
Q  230 tttttagaattgttctt 246  Q
     ||| ||||||||||||    
T  26870837 ctttcagaattgttctt 26870853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 38007796 - 38007564
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  38007796 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 38007697  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||| |||| ||||| | ||| ||| ||||||||||||||||||||    
T  38007696 attgaatcgctgcccatccaagtatttttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctctgtatctggtcatcaatgagagtg 38007597  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||| |||||  |||||  || ||||||||||||    
T  38007596 atttttttgcactttccgttcagaattgttctt 38007564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 47720406 - 47720638
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||    
T  47720406 agatctacttttgaacaactcgaacgtgcaagttctttgatgacttttcgagatcaaagataagcttaccaccttcttccatcacacgttctctgctgaa 47720505  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||| ||||    
T  47720506 attgaaccactgtccatccaagtatttttcatagcttgctctttcggcggtaatggggcgacacttatattttctctatgtctggtcatcaatgatagtg 47720605  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| || ||  ||| ||||||||||||    
T  47720606 attgttttgcgcatttctttcagaattgttctt 47720638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 17739996 - 17739760
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||| ||||||||||||||||||||||||| ||||||  |||||||||| |||||||| ||||||||||| |||||||||||||||| || | ||    
T  17739996 agcaaagatatactttggaacaactcgaacatgcatgttcttcggtgacttttccagatcaaatatgagcttaccaccttcttccatcacacattctttg 17739897  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    ||||||||||| ||||  ||||| |||||||||||||||||| |||||||| |||||||||| ||||||||||| ||||| ||| |||||||||||||||    
T  17739896 cagaaattgaaccactatccacc-aagtatttttcatagctttctctttcgacggtaatgagacgacacttatattttctctgtatctggtcatcaatga 17739798  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  17739797 gagtgattgttttgcgctttccttttagaattgttctt 17739760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 37701936 - 37702165
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||    
T  37701936 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaa 37702035  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||| | ||| | ||||||||||| ||||||||||    
T  37702036 attgaaccacttcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatattgtctctatgtctggtcattaatgagagtg 37702135  T
Q  214 attgttttgtgctttctttttagaattgtt 243  Q
    ||||  ||| |||||| ||| |||||||||    
T  37702136 attgaattgcgctttcctttcagaattgtt 37702165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 53342360 - 53342130
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  53342360 agatctactttggaacaactcgaatttgcaagttcttctgtgacttctcgagatcaaagatgagcttacctccttcttccatcactcgttatctgcggaa 53342261  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||| |||||||  || ||| ||||||||||| |||| ||||||| ||| ||||| ||||||||||||||||||    
T  53342260 attgaaccactgcccacccaagtaattttcttagcttg--ctatcgtcggtaatgaggtgacagttatactgtctctgtgtatggtcatcaatgagagtg 53342163  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  53342162 attgttttgcgctttccttttagaattgttctt 53342130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 19831734 - 19831966
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||| |||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||| ||| |||||    
T  19831734 agatttactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatctacagaa 19831833  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||| ||||||||||| |||| ||||||| ||  |||||||| |||||||||| ||||    
T  19831834 attgaaccactgcccacccaagtaattttcatagcttgctctatcgacggtaatgaggtgacaattatactgtccctgtgtctgatcatcaatgatagtg 19831933  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  19831934 attgttttgcgctttcctttcagaattgttctt 19831966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 13628004 - 13627772
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||| |||||||||||||||  | ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  13628004 agatctaccttggaacaactcgaattttcaagttcttctgtgtcttttcgagatcaaagatgagcttaccaccttcttccatcacttgttatctgcagaa 13627905  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||  |||||| ||||| ||||||||||||||||| ||||||||||||||| |||| ||||||| ||| ||||||||||||| ||||||||||    
T  13627904 attgaaccaccgcccacctaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatactgtctctgtgtctggtcattaatgagagtg 13627805  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| | |||| ||| ||||||||||||    
T  13627804 attgttttgcgttttcctttcagaattgttctt 13627772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 28135403 - 28135635
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||| | |||||||    
T  28135403 agatctactttggaacaactcgaatttgtaagttcttctgtgacttttcgagatcaaagatgagcttaccaacttcttccatcactcgttatatgcagaa 28135502  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||| |||||  |||||||||||| ||| ||| ||||||||||| |||| ||||| | ||| ||||||||||||||| ||||||||    
T  28135503 attgaaccactgcccacctaagtaactttcatagcttgttctatcgacggtaatgaggtgacagttatattgtctctgtgtctggtcatcattgagagtg 28135602  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||||||||||||||||    
T  28135603 attgttttgcgctttccttttagaattgttctt 28135635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 35495880 - 35496112
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  35495880 agatctacttttgaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgcagaa 35495979  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  ||||||||||| ||||||||||||||||| ||| ||||||||||| |||| ||||||  ||| ||||||| ||||||||||||||||    
T  35495980 attgaaccactgtccacccaagtaattttcatagcttgctctatcgtcggtaatgaggtgacagttataccgtctctgtgtctagtcatcaatgagagtg 35496079  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||  ||||| |||||| ||| ||||||||||||    
T  35496080 ataattttgcgctttcctttcagaattgttctt 35496112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 17699128 - 17698899
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||| |||| || |||||||||||||||||||||||||||||||  |||||||| ||||| |||| |||||||||    
T  17699128 agatctactttggaacaactcgaatttgctagtttttctgtgacttttcgagatcaaagatgagcttactaccttcttctatcactcgttatctgcagaa 17699029  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||| | ||||| ||||||||| |||| ||||||  ||| ||||||||||||||||||||| ||    
T  17699028 attgaaccactgcccacccaagtaattttcatagcttgctttatcggccgtaatgaggtgacagttatacggtctctgtgtctggtcatcaatgagattg 17698929  T
Q  214 attgttttgtgctttctttttagaattgtt 243  Q
    ||||||||| |||||| ||| |||||||||    
T  17698928 attgttttgcgctttcctttcagaattgtt 17698899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 7644129 - 7644356
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||       
T  7644129 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgca--- 7644225  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
         | |||| |||||||||||||||||||||||||||||| || | |||||||| | |||| ||||||| ||| |||||||| |||||||||||||||    
T  7644226 -----accactgcccacccaagtatttttcatagcttgctctatcagaggtaatgaagtgacagttatactgtctctgtgtctgatcatcaatgagagtg 7644320  T
Q  214 attgttttgtgctttctttttagaattgttcttaac 249  Q
    | ||||||| |||||| ||| |||||||||||||||    
T  7644321 actgttttgcgctttcctttcagaattgttcttaac 7644356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 8530782 - 8530618
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||| | ||||||||||||||||| | |||||||    
T  8530782 agatctactttggaacaactcgaacatgcaagttcttcggtgaattttcgagatcaaagatgaacttaccactttcttccatcacacgttctttgcagaa 8530683  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacact 178  Q
    |||||| |||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  8530682 attgaaccactgcccacccaaatatttttcatagctttctctttcgacggtaatgaggcgacact 8530618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 15520666 - 15520494
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  15520666 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 15520567  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
    |||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15520566 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 15520494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 740752 - 740921
Alignment:
Q  19 tactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattga 118  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  740752 tactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaattga 740851  T
Q  119 atcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 188  Q
      ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  740852 tccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttct 740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 5272612 - 5272824
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  5272612 agatctactttggaacaactcgaatttgcaagttcttctgcgacttttcgagatcaaagatgagcttaccaccttcttccatcattcgttatctgcagaa 5272711  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||              ||||| ||||||||||||||||| ||||||||||| ||  |||| ||||||      |||||||||||||| |||||||||    
T  5272712 attga--------------aagtaattttcatagcttgctctatcggcggtaataagatgacagttatac------tgtgtctggtcatcgatgagagtg 5272791  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  5272792 attgttttgcgctttcctttcagaattgttctt 5272824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 41984565 - 41984703
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| ||||||||||||||||||||||||| ||||||||| |  |||||||||| ||||||| |||||||||||  ||||||||| |||||| || ||||    
T  41984565 agcaaagatctactttggaacaactcgaacgtgcaagttcatcggtgacttttcaagatcaatgatgagcttactaccttcttccttcacactttctctg 41984664  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatag 147  Q
    ||||||||||| |||| ||||||||||||| ||||||||    
T  41984665 cagaaattgaaccactgcccacccaagtatgtttcatag 41984703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 22116379 - 22116466
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  22116379 atctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtt 22116466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 2776244 - 2776155
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  2776244 agatctactttggaacaactcgaatttgcaatttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtt 2776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 19590629 - 19590555
Alignment:
Q  172 cgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  19590629 cgacacttatactttctctatgtctggtcatcaatgagagtgattgttttgcgctttcctttcagaattgttctt 19590555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 21353051 - 21352961
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttc-ttccatcacacgtt 103  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||| ||||||| ||||| ||||||||| ||||    
T  21353051 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgggcttaccaccttctttccatcactcgtt 21352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 10259814 - 10259892
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  10259814 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 10259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 21564641 - 21564563
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  21564641 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 21564563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 43332162 - 43332084
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  43332162 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 43332084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 51452229 - 51452151
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  51452229 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 51452151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 24077883 - 24077961
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||| ||||| |||||| ||| | ||||||||||    
T  24077883 gaggcgacacttatactttctctatgtttgttcatcaatgagagtgattattttgcgctttcctttcataattgttctt 24077961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 26924753 - 26924831
Alignment:
Q  168 gaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||||||||||||||||||||   ||| || |||||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  26924753 gaggcgacacttatactttctccatgtttgttcatcaatgagagtgattattttgcgctttcctttcagaattgttctt 26924831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 28120736 - 28120790
Alignment:
Q  192 tgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  28120736 tgtctagtcatcaatgagagtgattgttttgcgctttcctttcagaattgttctt 28120790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 39715037 - 39715079
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  39715037 aatgagagtgattgttttgcgctttccttttagaattgttctt 39715079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 52800794 - 52800752
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  52800794 aatgagagtgattgttttgcgctttccttttagaattgttctt 52800752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 119968 - 119741
Alignment:
Q  19 tactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattga 118  Q
    |||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  119968 tactttggaacaactcgaatgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattga 119869  T
Q  119 atcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgt 218  Q
    | |||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||| |||||| |||||||||||||||    
T  119868 accactgcccacccaagcatttttcatagcttgctctttctgcggtaatgaggtgacacttatactttctctgtgtcaggtcattaatgagagtgattgt 119769  T
Q  219 tttgtgctttctttttagaattgttctt 246  Q
    |||| |||||| ||| |||||| |||||    
T  119768 tttgcgctttcctttcagaattattctt 119741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 49982 - 49752
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||   | |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||    
T  49982 agatctacttttgaacaactcgaacgtgcaagttcttcgattacttttcgagatcaaagatgagcttaccaccttcttccatcacatgttctctgctgaa 49883  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  49882 attgaaccactgtccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttc--tgtgtctggtcatcaatgagagtg 49785  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||  ||| ||||||||||||    
T  49784 attgttttgcgcttttctttcagaattgttctt 49752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 9859 - 9629
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  9859 atctactttggaacaactcgaacttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttctcccatcactcgttatctgcagaaat 9760  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| |||| |||||||||||| ||||||||||||||||| |||||| |||||||  |||| ||||||| ||| ||||||||||||||||||||||||||    
T  9759 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgacagttatactgtctctgtgtctggtcatcaatgagagtgat 9660  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||| |||||| ||| ||||||||||||    
T  9659 tgttttgcgctttcctttcagaattgttctt 9629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 150; Significance: 2e-79; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 64956 - 65165
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||| |||||| |||||| ||| |||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  64956 agatctattttggatcaactcaaacgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttttctgcagaa 65055  T
Q  114 a-ttgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagt 212  Q
    | ||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  65056 aattgaaccactgccaaccaaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagagt 65155  T
Q  213 gattgttttg 222  Q
    ||||||||||    
T  65156 gattgttttg 65165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 152472 - 152708
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctg 108  Q
    |||| |||| || ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  152472 agcaaagatatattttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctg 152571  T
Q  109 cagaaattgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatga 208  Q
    |||||||| || |||| | | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  152572 cagaaattaaaccactgcgc-ccctagtatttttcatagcttgctctttcggaggtaatgaggcgacacttatactttctctgtgtctggtcatcaatga 152670  T
Q  209 gagtgattgttttgtgctttctttttagaattgttctt 246  Q
    || || |||||||| |||||   || ||||||||||||    
T  152671 gaatgtttgttttgcgcttttccttcagaattgttctt 152708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 351 - 119
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    |||||||||||| |||||||||||  | ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  351 agatctactttgaaacaactcgaattttcaagttcttatgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 252  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtg 213  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||| | ||| ||||||||||||||||||||||||    
T  251 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatattgtctctgtgtctggtcatcaatgagagtg 152  T
Q  214 attgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||| |||||| ||| ||||||||||||    
T  151 attgttttgcgctttcctttcagaattgttctt 119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 26684 - 26914
Alignment:
Q  16 atctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaat 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  26684 atctactttggaacaactcgaacttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttctcccatcactcgttatctgcagaaat 26783  T
Q  116 tgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgat 215  Q
    |||| |||| |||||||||||| ||||||||||||||||| |||||| |||||||  |||| ||||||| ||| ||||||||||||||||||||||||||    
T  26784 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgacaattatactgtctctgtgtctggtcatcaatgagagtgat 26883  T
Q  216 tgttttgtgctttctttttagaattgttctt 246  Q
    ||||||  |||||| ||| ||||||||||||    
T  26884 tgttttacgctttcctttcagaattgttctt 26914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 30 - 246
Target Start/End: Complemental strand, 1256 - 1040
Alignment:
Q  30 aactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaaattgaatcacttccca 129  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||| ||||||| ||| ||||||||||| |||| ||||    
T  1256 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagtttaccaccttcttccatgacacgttctctacagaaattgaaccactgccca 1157  T
Q  130 cccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttatactttctatgtgtctggtcatcaatgagagtgattgttttgtgctttc 229  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||     
T  1156 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttatactttctctgtgtctggtcatcaatgagaatgtttgttttgcgctttt 1057  T
Q  230 tttttagaattgttctt 246  Q
     ||| ||||||||||||    
T  1056 ctttcagaattgttctt 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 29339 - 29495
Alignment:
Q  14 agatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttttctgcagaa 113  Q
    ||||||||||||||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  29339 agatctactttggaacaactcgaacgtataagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttccatcacacgttctctgcagaa 29438  T
Q  114 attgaatcacttcccacccaagtatttttcatagcttgctctttcggcggtaatgag 170  Q
    ||||||  | |  |||||||||||||||||||||||| ||||||||| |||||||||    
T  29439 attgaactattgtccacccaagtatttttcatagctttctctttcggtggtaatgag 29495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 4496 - 4591
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgagcttacctccttcttccatcacacgttt 104  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  4496 agcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacatgttt 4591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 4586 - 4643
Alignment:
Q  189 atgtgtctggtcatcaatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    |||| ||| |||||||||||||||||||| |||| |||||  ||||||||||||||||    
T  4586 atgtttcttgtcatcaatgagagtgattgctttgcgcttttcttttagaattgttctt 4643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 10927 - 10992
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttttgtgacttttcgagatcaaagat 74  Q
    |||| |||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||    
T  10927 agcaaagatctactttggaacaactcgaatatgtaagttcttcggtgacttttcgagatcaaagat 10992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 53301 - 53348
Alignment:
Q  30 aactcgaacatgcaagttcttttgtgacttttcgagatcaaagatgag 77  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||    
T  53301 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgag 53348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 13502 - 13460
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  13502 aatgagagtgattgttttgcgctttccttttagaattgttctt 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 18898 - 18940
Alignment:
Q  204 aatgagagtgattgttttgtgctttctttttagaattgttctt 246  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  18898 aatgagagtgattgttttgcgctttccttttagaattgttctt 18940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 100538 - 100496
Alignment:
Q  9 agcagagatctactttggaacaactcgaacatgcaagttcttt 51  Q
    |||| |||||||||||  |||||||||||||||||||||||||    
T  100538 agcaaagatctactttcaaacaactcgaacatgcaagttcttt 100496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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