View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12603_low_14 (Length: 251)
Name: NF12603_low_14
Description: NF12603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12603_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 30571333 - 30571569
Alignment:
| Q |
1 |
ttaatgatgaatgaaacaataattaggagattgaaaagaagnnnnnnnnncgaataataataataatagtagaagaatgaatataccttagaaggatcaa |
100 |
Q |
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| T |
30571333 |
ttaatgatgaatgaaacaataattaggagattgaaaaaaa-------aaacgaataataataataatagtagaagaataaatataccttagaaggatcaa |
30571425 |
T |
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| Q |
101 |
ctttctggaagtttttgacgcaagaaacgacgcgatctgtgacctcagatttgtcgagaaacgtacccctaacctcttcgctgaagcgacgaaggaagaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
30571426 |
ctttctggaagtttttgacgcaagaaacgacgcgatctgtgacctcagatttgtcgagaaacgtacccctaacctcttcgctgaagcgacgaaggaaaaa |
30571525 |
T |
|
| Q |
201 |
attgggaataagacggaaaggagattggtgattcagtgaacgag |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
30571526 |
attgggaataagacggaaaggagattggtgattcagtggacgag |
30571569 |
T |
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