View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12605_low_11 (Length: 255)

Name: NF12605_low_11
Description: NF12605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12605_low_11
NF12605_low_11
[»] chr8 (23 HSPs)
chr8 (1-255)||(22907353-22907607)
chr8 (106-221)||(24548956-24549071)
chr8 (99-223)||(16405144-16405268)
chr8 (102-233)||(17345540-17345671)
chr8 (1-73)||(43685584-43685656)
chr8 (1-73)||(5238125-5238197)
chr8 (1-73)||(24661401-24661473)
chr8 (99-221)||(43373642-43373761)
chr8 (106-221)||(6774420-6774535)
chr8 (99-221)||(222854-222975)
chr8 (99-221)||(736477-736598)
chr8 (99-221)||(860372-860493)
chr8 (106-221)||(16193890-16194005)
chr8 (99-221)||(21852128-21852249)
chr8 (99-221)||(30120690-30120811)
chr8 (99-176)||(21844780-21844856)
chr8 (89-241)||(24928945-24929096)
chr8 (89-243)||(23837154-23837308)
chr8 (103-173)||(16674603-16674672)
chr8 (88-210)||(41246613-41246735)
chr8 (12-69)||(22321597-22321654)
chr8 (91-161)||(13662492-13662561)
chr8 (12-92)||(23217924-23218004)
[»] chr3 (29 HSPs)
chr3 (1-255)||(16744254-16744508)
chr3 (88-241)||(15859178-15859331)
chr3 (105-255)||(17912621-17912771)
chr3 (12-208)||(15468520-15468717)
chr3 (12-208)||(22275088-22275285)
chr3 (99-221)||(12030321-12030443)
chr3 (106-221)||(15614808-15614923)
chr3 (99-221)||(2049777-2049899)
chr3 (99-221)||(14842735-14842856)
chr3 (99-221)||(15936801-15936922)
chr3 (106-241)||(47984624-47984759)
chr3 (106-241)||(48003198-48003333)
chr3 (106-241)||(47993911-47994046)
chr3 (106-241)||(48012484-48012619)
chr3 (99-221)||(15938643-15938764)
chr3 (89-241)||(13838852-13839003)
chr3 (88-230)||(51158183-51158325)
chr3 (1-73)||(2449391-2449463)
chr3 (99-173)||(41270043-41270116)
chr3 (99-173)||(55316187-55316260)
chr3 (99-173)||(45860773-45860846)
chr3 (99-173)||(13955112-13955185)
chr3 (99-173)||(13975944-13976017)
chr3 (99-148)||(19231945-19231994)
chr3 (91-241)||(16821099-16821248)
chr3 (12-92)||(18969968-18970048)
chr3 (88-120)||(22144532-22144564)
chr3 (128-249)||(12264932-12265053)
chr3 (128-243)||(11329098-11329214)
[»] chr7 (22 HSPs)
chr7 (1-255)||(7292886-7293140)
chr7 (87-230)||(13037179-13037322)
chr7 (99-230)||(11580904-11581035)
chr7 (99-221)||(36052634-36052756)
chr7 (106-241)||(47481185-47481320)
chr7 (99-221)||(16211733-16211855)
chr7 (99-221)||(18254009-18254130)
chr7 (106-235)||(13320988-13321117)
chr7 (102-221)||(16479124-16479244)
chr7 (1-73)||(11516265-11516337)
chr7 (1-73)||(15441717-15441789)
chr7 (1-73)||(30262282-30262354)
chr7 (99-230)||(3059933-3060064)
chr7 (99-221)||(10989378-10989499)
chr7 (99-221)||(2437425-2437546)
chr7 (117-241)||(13911168-13911292)
chr7 (99-173)||(13572644-13572717)
chr7 (102-234)||(296128-296257)
chr7 (99-173)||(25292560-25292633)
chr7 (88-120)||(15822691-15822723)
chr7 (12-92)||(13351999-13352079)
chr7 (88-243)||(17224075-17224230)
[»] chr4 (19 HSPs)
chr4 (1-255)||(26680070-26680324)
chr4 (88-230)||(13246386-13246528)
chr4 (103-241)||(15675243-15675381)
chr4 (106-241)||(31115603-31115738)
chr4 (88-223)||(54118416-54118551)
chr4 (99-230)||(111362-111493)
chr4 (103-186)||(10104440-10104523)
chr4 (99-241)||(10644187-10644328)
chr4 (1-73)||(10488600-10488672)
chr4 (18-73)||(16328079-16328134)
chr4 (99-221)||(47357622-47357743)
chr4 (102-177)||(7849970-7850044)
chr4 (99-173)||(13048444-13048517)
chr4 (99-243)||(15044794-15044938)
chr4 (154-243)||(41166083-41166172)
chr4 (88-120)||(44055870-44055902)
chr4 (156-243)||(7185981-7186068)
chr4 (196-241)||(10104404-10104449)
chr4 (12-73)||(19559410-19559471)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-255)||(37205-37459)
[»] chr2 (17 HSPs)
chr2 (88-241)||(19794858-19795011)
chr2 (103-241)||(24341543-24341681)
chr2 (99-241)||(36982595-36982737)
chr2 (99-230)||(8891209-8891340)
chr2 (106-210)||(25265575-25265679)
chr2 (99-221)||(19886824-19886945)
chr2 (102-209)||(7508030-7508138)
chr2 (99-229)||(43643123-43643250)
chr2 (99-230)||(462706-462836)
chr2 (1-73)||(14906593-14906665)
chr2 (1-73)||(20015049-20015121)
chr2 (1-73)||(23820109-23820181)
chr2 (28-73)||(19689554-19689599)
chr2 (99-219)||(20627489-20627609)
chr2 (99-166)||(17396882-17396948)
chr2 (154-210)||(19669279-19669335)
chr2 (88-120)||(32465813-32465845)
[»] scaffold0622 (1 HSPs)
scaffold0622 (88-230)||(9338-9480)
[»] scaffold0195 (2 HSPs)
scaffold0195 (99-241)||(19173-19315)
scaffold0195 (99-241)||(21257-21399)
[»] chr5 (23 HSPs)
chr5 (88-230)||(27182712-27182854)
chr5 (103-241)||(22053987-22054125)
chr5 (107-241)||(18531221-18531355)
chr5 (99-221)||(23506932-23507054)
chr5 (89-208)||(17471768-17471887)
chr5 (102-233)||(34939248-34939379)
chr5 (99-221)||(12342-12463)
chr5 (99-221)||(21073758-21073879)
chr5 (99-221)||(25426596-25426717)
chr5 (106-180)||(29190478-29190552)
chr5 (99-176)||(18778200-18778276)
chr5 (99-176)||(22366689-22366765)
chr5 (1-73)||(20623007-20623079)
chr5 (1-73)||(21233681-21233753)
chr5 (99-221)||(19499867-19499988)
chr5 (99-241)||(43443538-43443679)
chr5 (1-73)||(25900558-25900630)
chr5 (1-73)||(37052782-37052854)
chr5 (118-243)||(4200126-4200251)
chr5 (1-73)||(16536235-16536307)
chr5 (99-173)||(27009809-27009882)
chr5 (110-243)||(19862186-19862319)
chr5 (99-243)||(23493885-23494029)
[»] chr6 (15 HSPs)
chr6 (88-230)||(23153403-23153545)
chr6 (99-210)||(35009624-35009735)
chr6 (102-233)||(1657909-1658040)
chr6 (106-221)||(14626292-14626407)
chr6 (106-221)||(1650267-1650382)
chr6 (102-233)||(15862443-15862573)
chr6 (99-221)||(25175531-25175652)
chr6 (102-235)||(27740808-27740941)
chr6 (99-176)||(16825962-16826038)
chr6 (99-176)||(27654191-27654267)
chr6 (88-242)||(18381821-18381975)
chr6 (113-219)||(22361926-22362032)
chr6 (12-73)||(15889853-15889914)
chr6 (88-117)||(32898745-32898774)
chr6 (128-243)||(25367374-25367490)
[»] chr1 (15 HSPs)
chr1 (99-241)||(20445646-20445788)
chr1 (99-241)||(20531411-20531553)
chr1 (88-223)||(20893798-20893933)
chr1 (99-221)||(20913004-20913126)
chr1 (106-221)||(2116228-2116343)
chr1 (99-221)||(20931312-20931434)
chr1 (99-230)||(37844616-37844746)
chr1 (99-221)||(22227777-22227898)
chr1 (99-221)||(22232474-22232595)
chr1 (102-221)||(41394191-41394311)
chr1 (106-186)||(45051416-45051496)
chr1 (1-73)||(51452530-51452602)
chr1 (99-173)||(5072599-5072672)
chr1 (99-173)||(18601329-18601402)
chr1 (89-120)||(49967607-49967638)
[»] scaffold0023 (2 HSPs)
scaffold0023 (99-230)||(48565-48696)
scaffold0023 (103-176)||(36065-36137)
[»] scaffold0077 (1 HSPs)
scaffold0077 (99-241)||(37067-37209)
[»] scaffold0025 (2 HSPs)
scaffold0025 (103-241)||(8820-8958)
scaffold0025 (99-221)||(148688-148810)
[»] scaffold0008 (3 HSPs)
scaffold0008 (99-231)||(128332-128464)
scaffold0008 (118-241)||(31819-31942)
scaffold0008 (92-120)||(22650-22678)
[»] scaffold0125 (1 HSPs)
scaffold0125 (106-210)||(41622-41726)
[»] scaffold0011 (3 HSPs)
scaffold0011 (99-223)||(123336-123460)
scaffold0011 (88-120)||(255074-255106)
scaffold0011 (88-120)||(261680-261712)
[»] scaffold0012 (1 HSPs)
scaffold0012 (99-230)||(247607-247738)
[»] scaffold1542 (1 HSPs)
scaffold1542 (101-223)||(706-828)
[»] scaffold0498 (1 HSPs)
scaffold0498 (99-221)||(8846-8967)
[»] scaffold0266 (2 HSPs)
scaffold0266 (99-221)||(1091-1213)
scaffold0266 (99-221)||(3756-3877)
[»] scaffold0106 (1 HSPs)
scaffold0106 (88-230)||(41686-41827)
[»] scaffold0049 (1 HSPs)
scaffold0049 (99-221)||(48155-48276)
[»] scaffold0302 (1 HSPs)
scaffold0302 (99-231)||(12083-12214)
[»] scaffold0215 (2 HSPs)
scaffold0215 (106-221)||(9511-9626)
scaffold0215 (106-221)||(16409-16524)
[»] scaffold0026 (2 HSPs)
scaffold0026 (99-221)||(107715-107836)
scaffold0026 (99-173)||(64739-64812)
[»] scaffold0218 (1 HSPs)
scaffold0218 (99-228)||(5228-5356)
[»] scaffold0413 (1 HSPs)
scaffold0413 (99-231)||(6227-6358)
[»] scaffold0175 (1 HSPs)
scaffold0175 (99-219)||(1131-1250)
[»] scaffold0104 (1 HSPs)
scaffold0104 (99-221)||(48482-48603)
[»] scaffold0075 (1 HSPs)
scaffold0075 (102-241)||(34614-34755)
[»] scaffold0529 (1 HSPs)
scaffold0529 (106-241)||(2936-3072)
[»] scaffold0162 (2 HSPs)
scaffold0162 (106-210)||(8362-8466)
scaffold0162 (99-228)||(26582-26710)
[»] scaffold1560 (1 HSPs)
scaffold1560 (99-221)||(26-147)
[»] scaffold0369 (1 HSPs)
scaffold0369 (99-221)||(3690-3811)
[»] scaffold0132 (1 HSPs)
scaffold0132 (106-210)||(13480-13584)
[»] scaffold0022 (1 HSPs)
scaffold0022 (99-221)||(5378-5498)
[»] scaffold0076 (1 HSPs)
scaffold0076 (99-176)||(42965-43041)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-73)||(22578-22650)
scaffold0141 (1-73)||(26833-26905)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-73)||(1735-1807)
[»] scaffold0009 (1 HSPs)
scaffold0009 (89-241)||(271983-272134)
[»] scaffold0001 (3 HSPs)
scaffold0001 (89-241)||(171863-172014)
scaffold0001 (89-241)||(177566-177717)
scaffold0001 (88-120)||(70882-70914)
[»] scaffold0139 (2 HSPs)
scaffold0139 (99-186)||(14258-14344)
scaffold0139 (99-220)||(21279-21399)
[»] scaffold1404 (1 HSPs)
scaffold1404 (99-148)||(1815-1863)
[»] scaffold0361 (1 HSPs)
scaffold0361 (107-176)||(3183-3252)
[»] scaffold0116 (1 HSPs)
scaffold0116 (99-173)||(3-76)
[»] scaffold0053 (1 HSPs)
scaffold0053 (88-243)||(76984-77139)
[»] scaffold0021 (1 HSPs)
scaffold0021 (88-210)||(132420-132542)
[»] scaffold0066 (2 HSPs)
scaffold0066 (128-249)||(54412-54533)
scaffold0066 (128-172)||(45007-45051)
[»] scaffold0028 (1 HSPs)
scaffold0028 (128-210)||(79533-79616)
[»] scaffold0483 (1 HSPs)
scaffold0483 (12-73)||(1028-1089)
[»] scaffold0240 (1 HSPs)
scaffold0240 (88-117)||(7522-7551)
[»] scaffold0109 (1 HSPs)
scaffold0109 (12-73)||(45815-45876)
[»] scaffold0044 (1 HSPs)
scaffold0044 (88-117)||(38253-38282)
[»] scaffold0970 (1 HSPs)
scaffold0970 (154-210)||(2476-2532)


Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 22907607 - 22907353
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 100  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22907607 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatt 22907508  T
Q  101 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22907507 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 22907408  T
Q  201 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907407 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 22907353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 24548956 - 24549071
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  24548956 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 24549055  T
Q  206 aattgcacaagaatca 221  Q
    |||||  |||||||||    
T  24549056 aattgagcaagaatca 24549071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 16405268 - 16405144
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||| ||||||  || ||||||||||| |||||||||||||| |||||| |||| || |||    
T  16405268 tttcatcaaaacaccaacaacatctcaaattatcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaa 16405169  T
Q  199 caacatcaattgcacaagaatcata 223  Q
     ||||||||||| ||||||||||||    
T  16405168 taacatcaattgaacaagaatcata 16405144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 17345540 - 17345671
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 201  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  17345540 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 17345639  T
Q  202 catcaattgcacaagaatcatagctcaattca 233  Q
     ||||| || |||||||||||| |||||||||    
T  17345640 tatcaactgaacaagaatcataactcaattca 17345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43685584 - 43685656
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43685584 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 43685656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5238125 - 5238197
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5238125 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 5238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24661473 - 24661401
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24661473 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 24661401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 43373761 - 43373642
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||   |||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
T  43373761 tttcaccaaaacaccaacaa---ttcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 43373665  T
Q  199 caacatcaattgcacaagaatca 221  Q
     | ||||||||| ||||||||||    
T  43373664 tagcatcaattgaacaagaatca 43373642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 6774535 - 6774420
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||||||||||| |||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||    
T  6774535 aaaacaccaacaacaaatcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 6774436  T
Q  206 aattgcacaagaatca 221  Q
    |||||  |||||||||    
T  6774435 aattgagcaagaatca 6774420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 222975 - 222854
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  222975 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 222877  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  222876 taacatcatttgaacaagaatca 222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 736598 - 736477
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  736598 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 736500  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  736499 taacatcatttgaacaagaatca 736477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 860493 - 860372
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  860493 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 860395  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  860394 taacatcatttgaacaagaatca 860372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 16194005 - 16193890
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||||||||||  |||||||  |||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||    
T  16194005 aaaacaccaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 16193906  T
Q  206 aattgcacaagaatca 221  Q
    ||||| ||||||||||    
T  16193905 aattgaacaagaatca 16193890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 21852249 - 21852128
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  21852249 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21852151  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  21852150 taacatcatttgaacaagaatca 21852128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 30120690 - 30120811
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  30120690 tttcaccaaaacaccaaca-caattcaaattatcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 30120788  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||| ||||||    
T  30120789 taacatcaattgaacatgaatca 30120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 21844856 - 21844780
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||||    
T  21844856 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaa 21844780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 24929096 - 24928945
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 188  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| || |||  |||||| ||| |||||||||||||||||||||||  | |||||| |    
T  24929096 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaa 24928998  T
Q  189 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||    
T  24928997 ttaacaaccataacctcaattgaacaagagacataactcaatccaaccacaac 24928945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 243
Target Start/End: Original strand, 23837154 - 23837308
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatct 187  Q
    ||||||| |||||||| ||| ||||| |||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||| | ||||||     
T  23837154 aattcaccaatttcacaaaaccaccaccaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
     |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837253 cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 16674672 - 16674603
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||| | || |||||||| ||||||    
T  16674672 accaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaactcaagcaattattcat 16674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 41246613 - 41246735
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatc 186  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| || ||| ||||||| |||| | |||||||| |||| | |||| | | |||||     
T  41246613 caattcacaaatttcaccaaaacaccaacaacatttc-atttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 41246711  T
Q  187 tattagcatcaacaacatcaattg 210  Q
      ||| || |||||||||||||||    
T  41246712 acttaacaacaacaacatcaattg 41246735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22321654 - 22321597
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaa 69  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| |||| |||||    
T  22321654 catcaacaatcaaccacaatcacaacatataatcatgcattccatcacaatttaacaa 22321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 13662561 - 13662492
Alignment:
Q  91 ttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaa 161  Q
    ||||| |||||||| ||| |||||||||||||| |  |||||||||||||||||| |  ||||||||||||    
T  13662561 ttcaccaatttcacaaaaccaccaacaacaatttag-ttctcatcatcaatccataattatgtatacccaa 13662492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 23217924 - 23218004
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 92  Q
    ||||||||||||||| |||  | ||| ||||||||| || ||||||| | |||||||||||| | ||||| ||| ||||||    
T  23217924 catcaacaatcaaccacaactacaacttataatcatgcattccatcacatttcaacaacaacatgtcataattcatcaatt 23218004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 16744508 - 16744254
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 100  Q
    ||||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744508 aatgagatcaacatcaactatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 16744409  T
Q  101 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  16744408 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaaca 16744309  T
Q  201 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 255  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16744308 acatcaattgcacaagaatcatagctcaattcaactataacatgtcaaattcatc 16744254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 88 - 241
Target Start/End: Complemental strand, 15859331 - 15859178
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  15859331 caattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 15859232  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    |||| || | | ||||||||||| |||||||||||| ||||||||||| |||||    
T  15859231 attaacagccataacatcaattgaacaagaatcataactcaattcaacaacaac 15859178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 255
Target Start/End: Complemental strand, 17912771 - 17912621
Alignment:
Q  105 caaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacat 204  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||    
T  17912771 caaaacacccacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacat 17912672  T
Q  205 caattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 255  Q
    | |||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  17912671 cgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatc 17912621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 15468717 - 15468520
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt-cacaaatttcaccaaaac 110  Q
    |||||||||| |||| ||| || ||| ||| |||||||| ||||||||  |||||||||||| | ||||| |||  ||||| ||||||||||||||||||    
T  15468717 catcaacaattaaccacaaccacaacttatgatcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaac 15468618  T
Q  111 accaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 208  Q
    | ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
T  15468617 aacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 15468520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 22275088 - 22275285
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttc-ctcaattcacaaatttcaccaaaac 110  Q
    |||||||||| |||| ||| || ||| ||| ||||| || ||||||||  |||||||||||| | ||||| ||| || | ||||||||||||||||||||    
T  22275088 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaac 22275187  T
Q  111 accaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 208  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
T  22275188 accaacaacaattcaaattctcatcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 22275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 12030443 - 12030321
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| |||| || | |    
T  12030443 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca 12030344  T
Q  199 caacatcaattgcacaagaatca 221  Q
     | ||||||||| ||||||||||    
T  12030343 tagcatcaattgaacaagaatca 12030321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 15614808 - 15614923
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  15614808 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 15614907  T
Q  206 aattgcacaagaatca 221  Q
    |||||  |||||||||    
T  15614908 aattgagcaagaatca 15614923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 2049777 - 2049899
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
T  2049777 tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 2049876  T
Q  199 caacatcaattgcacaagaatca 221  Q
     | ||||||||| |||| |||||    
T  2049877 tagcatcaattgaacaaaaatca 2049899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 14842856 - 14842735
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | |||||| |||| |||||||||  |||||||| |||| |||| |    
T  14842856 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatcca 14842758  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  14842757 taacatcaattgaacaagaatca 14842735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 15936922 - 15936801
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
T  15936922 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15936824  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  15936823 taacatcaattgaacaagaatca 15936801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 47984624 - 47984759
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
T  47984624 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 47984723  T
Q  206 aattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  47984724 aattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 48003198 - 48003333
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
T  48003198 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 48003297  T
Q  206 aattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  48003298 aattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 47993911 - 47994046
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||    
T  47993911 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 47994010  T
Q  206 aattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  47994011 aattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 48012484 - 48012619
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||    
T  48012484 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 48012583  T
Q  206 aattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  48012584 aattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 15938764 - 15938643
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
T  15938764 tttcaccaaaacaccaaca-caattcaaattttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15938666  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  15938665 taacatcaattgaacaagaatca 15938643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 241
Target Start/End: Original strand, 13838852 - 13839003
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 188  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| || |||  |||||| ||| |||||||| ||||||||||||||| | |||||| |    
T  13838852 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaa 13838950  T
Q  189 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||| || | | ||||||||||| |||||||||||| |||||| |||| |||||    
T  13838951 ttaacagccataacatcaattgaacaagaatcataactcaatccaaccacaac 13839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 51158325 - 51158183
Alignment:
Q  88 caattcacaaatttcaccaaaacacc-aacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 186  Q
    |||||||||||||| | ||||||||  |||||||  |||||||  |||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||    
T  51158325 caattcacaaattt-agcaaaacacttaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 51158227  T
Q  187 tattagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
     |||| || | | ||||||||||| |||||||||||| ||||||    
T  51158226 aattaacagccataacatcaattgaacaagaatcataactcaat 51158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2449463 - 2449391
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  2449463 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 2449391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 41270043 - 41270116
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  41270043 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 41270116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 55316187 - 55316260
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  55316187 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 55316260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 45860773 - 45860846
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||||||    
T  45860773 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcat 45860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 13955185 - 13955112
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| ||| | ||||||||||| ||||||    
T  13955185 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcat 13955112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 13976017 - 13975944
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| ||| | ||||||||||| ||||||    
T  13976017 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcat 13975944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 19231945 - 19231994
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa 148  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  19231945 tttcaccaaaacaccaacaacaatccaaattatcatcatcaattcatgaa 19231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 16821099 - 16821248
Alignment:
Q  91 ttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctatt 190  Q
    ||||| |||||||| ||| |||||||||| ||| |  || ||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||| | |    
T  16821099 ttcaccaatttcacaaaaccaccaacaaccatttat-ttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaat 16821197  T
Q  191 agcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    | |||  | ||||||||||| ||| |||||| | ||||| ||||| |||||    
T  16821198 aacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaac 16821248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 18969968 - 18970048
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 92  Q
    ||||||||||||||| ||| || ||| ||||||||| |  ||||||| |||||||||||||| | ||||| ||| ||||||    
T  18969968 catcaacaatcaaccacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatcaatt 18970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 22144564 - 22144532
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    |||||||||||||||||||||||||||||||||    
T  22144564 caattcacaaatttcaccaaaacaccaacaaca 22144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 249
Target Start/End: Complemental strand, 12265053 - 12264932
Alignment:
Q  128 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 227  Q
    |||||||||||||||||| |  |||||||||||||  || ||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  12265053 ttctcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 12264954  T
Q  228 aattcaactacaacatgtcaaa 249  Q
    | |||||| ||||||| |||||    
T  12264953 atttcaacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 11329214 - 11329098
Alignment:
Q  128 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 226  Q
    ||||||||| |||  |||||| |||| |||||||||| |||| | |||| | | ||||||  |||||| |||||||||||||||  || ||||| || |     
T  11329214 ttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatca 11329115  T
Q  227 caattcaactacaacat 243  Q
    ||||||||| |||||||    
T  11329114 caattcaacaacaacat 11329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 7292886 - 7293140
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 100  Q
    ||||||||  |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7292886 aatgagatcaacatcaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatt 7292985  T
Q  101 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7292986 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 7293085  T
Q  201 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 255  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7293086 acatcaattgcacaagaatcatagctcaattcaacaacaacatgtcaaattcatc 7293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 13037322 - 13037179
Alignment:
Q  87 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||    
T  13037322 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 13037223  T
Q  187 tattagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
     ||||  ||  | ||||| ||||| |||||||||||| ||||||    
T  13037222 aattaatattcataacattaattgaacaagaatcataactcaat 13037179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 11581035 - 11580904
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || | |    
T  11581035 tttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagcca 11580936  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  11580935 taacatcaattgaacaagaatcataactcaat 11580904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 36052634 - 36052756
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
T  36052634 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 36052733  T
Q  199 caacatcaattgcacaagaatca 221  Q
    |||||||||||| ||||||||||    
T  36052734 caacatcaattgaacaagaatca 36052756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 47481320 - 47481185
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | | ||||||    
T  47481320 aaaacaccaacaacaattcaaattatcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatc 47481221  T
Q  206 aattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||| |||||||||||| ||||||||||| |||||    
T  47481220 aattgaacaagaatcataactcaattcaacaacaac 47481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 16211733 - 16211855
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | |    
T  16211733 tttcaccaaaacaccaacaacaattcaaattctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaacca 16211832  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||  ||||||||||    
T  16211833 taacatcaatttaacaagaatca 16211855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 18254130 - 18254009
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
T  18254130 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 18254032  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  18254031 taacatcaattgaacaagaatca 18254009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 13320988 - 13321117
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||| |||||||||||||||||| ||||||  || | |||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
T  13320988 aaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatc 13321087  T
Q  206 aattgcacaagaatcatagctcaattcaac 235  Q
    ||||| ||| |||||||| |||||||||||    
T  13321088 aattgaacatgaatcatatctcaattcaac 13321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 16479244 - 16479124
Alignment:
Q  102 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |    
T  16479244 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 16479145  T
Q  201 acatcaattgcacaagaatca 221  Q
    ||||||||||  |||||||||    
T  16479144 acatcaattgagcaagaatca 16479124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11516265 - 11516337
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11516265 aatgagatcaacatcaacaatcaaccacaatcataacatatactcatacactccatcataattcaacaacaac 11516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15441789 - 15441717
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15441789 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 15441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30262354 - 30262282
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30262354 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 30262282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 3059933 - 3060064
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| ||||||||| ||||||  ||||||| ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   |    
T  3059933 tttcatcaaaacacccacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 3060032  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  3060033 taacatcaattgaacaagaatcataactcaat 3060064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 10989378 - 10989499
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  10989378 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10989476  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  10989477 taacatcatttgaacaagaatca 10989499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 2437425 - 2437546
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||| |||||||||  |||| ||| | || |||  |    
T  2437425 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattca 2437523  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  2437524 taacatcatttgaacaagaatca 2437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 13911292 - 13911168
Alignment:
Q  117 aacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaag 216  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||| ||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |    
T  13911292 aacaattcaaattctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatg 13911193  T
Q  217 aatcatagctcaattcaactacaac 241  Q
    ||||| | ||||| ||||| |||||    
T  13911192 aatcacatctcaaatcaacaacaac 13911168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 13572644 - 13572717
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||||||    
T  13572644 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcat 13572717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 296257 - 296128
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 201  Q
    ||||||||||||||||  ||||||| || ||| |||||||||||||| | | |||||||| || | ||||||||||   |||||| ||||  | ||||||    
T  296257 caccaaaacaccaacacaaattcaatttttcaacatcaatccatgaataagcatacccaatcagtaattcatcaac---aacatcaattaatagcaacaa 296161  T
Q  202 catcaattgcacaagaatcatagctcaattcaa 234  Q
    ||||||||| ||| |||||| | | ||||||||    
T  296160 catcaattgaacatgaatcacaacacaattcaa 296128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 25292633 - 25292560
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||| | ||||||||||| ||| | ||||||||||| ||||||    
T  25292633 tttcaccaaaacaccaaca-caactcaaattctcattaacaatccatgaatatgcaaacccaagcaattattcat 25292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 15822723 - 15822691
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    |||||||||||||||||||||||||||||||||    
T  15822723 caattcacaaatttcaccaaaacaccaacaaca 15822691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 13351999 - 13352079
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 92  Q
    ||||||||||| ||| ||| || ||| ||||||||| || ||||||  |||||||||||||| | ||||| ||| ||||||    
T  13351999 catcaacaatctaccacaaccacaacttataatcatgcattccatcccaattcaacaacaacatgtcataattcatcaatt 13352079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 243
Target Start/End: Complemental strand, 17224230 - 17224075
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 186  Q
    |||||||| ||||| || ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| ||||||   | ||||||    
T  17224230 caattcaccaattttacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatc 17224132  T
Q  187 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
      |||||| ||||||||||||||| ||| || || ||   ||||||||| |||||||    
T  17224131 acttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacat 17224075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 26680070 - 26680324
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 100  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||    
T  26680070 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatt 26680169  T
Q  101 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26680170 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 26680269  T
Q  201 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680270 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 26680324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 13246386 - 13246528
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  13246386 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 13246485  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
T  13246486 attaacagccataacatcaattgaacaagaatcataactcaat 13246528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 15675381 - 15675243
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 202  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| |||    
T  15675381 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataac 15675282  T
Q  203 atcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    |||||||| ||| |||||||| ||||||||||| |||||    
T  15675281 atcaattgaacatgaatcatatctcaattcaacaacaac 15675243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 31115603 - 31115738
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||    
T  31115603 aaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatc 31115702  T
Q  206 aattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||| ||| |||||||| ||||||||||| |||||    
T  31115703 aattgaacatgaatcatatctcaattcaacaacaac 31115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 54118551 - 54118416
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  54118551 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 54118452  T
Q  188 attagcatcaacaacatcaattgcacaagaatcata 223  Q
    |||| || | | ||||||||||| ||||||||||||    
T  54118451 attaacaactataacatcaattgaacaagaatcata 54118416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 111362 - 111493
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
T  111362 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 111461  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  111462 taacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 10104523 - 10104440
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 186  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||    
T  10104523 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatc 10104440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 10644187 - 10644328
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  10644187 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10644285  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     ||||||||||| ||| |||||| | ||||| ||||| |||||    
T  10644286 taacatcaattgaacatgaatcacatctcaaatcaacaacaac 10644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10488600 - 10488672
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  10488600 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 10488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 16328134 - 16328079
Alignment:
Q  18 caatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  16328134 caatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 16328079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 47357622 - 47357743
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||| ||  |||||||| |||| |||||||||  |||| ||| | || |||  |    
T  47357622 tttcaccaaaacaccaaca-cagctcaaattctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattca 47357720  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  47357721 taacatcatttgaacaagaatca 47357743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 7849970 - 7850044
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaac 177  Q
    |||||||||||||||| ||||||||||| |||||| |||| |||||  |||||||| ||||  |||||||||||||    
T  7849970 caccaaaacaccaaca-caattcaaattttcatcaccaattcatgattatgtatactcaagtcatgattcatcaac 7850044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 13048517 - 13048444
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||| | | ||||||||| ||| | ||||||||||| ||||||    
T  13048517 tttcaccaaaacaccaaca-caactcaaattctcattaactatccatgaatatgcaaacccaagcaattattcat 13048444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 15044794 - 15044938
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatca 197  Q
    |||||||||| || ||||||||||| |  |||||||||||||  |||||   ||| | |||||||| |||| |||||| | | ||||||  |||||| ||    
T  15044794 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 15044892  T
Q  198 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044893 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
Q  154 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
    |||||||||| ||||||||||||| | ||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166172 atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 44055870 - 44055902
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    |||||||||||||||||||||||||||||||||    
T  44055870 caattcacaaatttcaccaaaacaccaacaaca 44055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 7186068 - 7185981
Alignment:
Q  156 acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
    |||||||| |||| |||||||| |||| |||| |||||| ||||||||||||||  ||| |||||  | | ||||||||| |||||||    
T  7186068 acccaagccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacat 7185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 10104449 - 10104404
Alignment:
Q  196 caacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||||||||||||||| ||| |||||||| ||||||||||| |||||    
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaac 10104404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 19559410 - 19559471
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||||| ||| ||| || ||| ||||||||| || ||||||| ||||||||||||||    
T  19559410 catcaacaatctaccacaaccacaacttataatcatgcattccatcacaattcaacaacaac 19559471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 37459 - 37205
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 100  Q
    ||||||||  |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  37459 aatgagatcaacattaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaaaaacttatcatatttcatcaattcacaaatt 37360  T
Q  101 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37359 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 37260  T
Q  201 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatc 255  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37259 acatcaattgcacaagaatcatagctcaatccaactacaacatgtcaaattcatc 37205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 241
Target Start/End: Complemental strand, 19795011 - 19794858
Alignment:
Q  88 caattcacaaatttcaccaaaa-caccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 186  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  19795011 caattcacaa-tttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatc 19794913  T
Q  187 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     |||| |   || ||||||||||| |||||||||||| ||||||||||| |||||    
T  19794912 aattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaac 19794858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 24341681 - 24341543
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 202  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| |||| || ||| |||    
T  24341681 accaaaacaccaacaataattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataac 24341582  T
Q  203 atcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    |||||||| ||| |||||||| ||||||||||| |||||    
T  24341581 atcaattgaacatgaatcatatctcaattcaacaacaac 24341543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 241
Target Start/End: Complemental strand, 36982737 - 36982595
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || |||    
T  36982737 tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa 36982638  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     ||||||||||| ||| |||||||| ||||||||||| |||||    
T  36982637 taacatcaattgaacaggaatcataactcaattcaacaacaac 36982595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 8891209 - 8891340
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | |    
T  8891209 tttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 8891308  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  8891309 taacatcaattgaacaagaatcataactcaat 8891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 25265679 - 25265575
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||    
T  25265679 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 25265580  T
Q  206 aattg 210  Q
    |||||    
T  25265579 aattg 25265575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 19886945 - 19886824
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  19886945 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 19886847  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  19886846 taacatcatttgaacaagaatca 19886824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 7508138 - 7508030
Alignment:
Q  102 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |    
T  7508138 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 7508039  T
Q  201 acatcaatt 209  Q
    |||||||||    
T  7508038 acatcaatt 7508030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 43643250 - 43643123
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| ||||||||||||| |   ||||||| ||||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||| |||| || |||    
T  43643250 tttcatcaaaacaccaacatc---tcaaattatcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaa 43643154  T
Q  199 caacatcaattgcacaagaatcatagctcaa 229  Q
     | ||||||||| |||||||||||| |||||    
T  43643153 tagcatcaattgaacaagaatcatatctcaa 43643123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 462706 - 462836
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||| |||||| ||| |||||||||||||||||||||||  |  ||||| |||| || | |    
T  462706 tttcatcaaaacaccaacaaca-ttcaaattcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagcca 462804  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  462805 taacatcaattgaacaagaatcataactcaat 462836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14906665 - 14906593
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  14906665 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 14906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20015049 - 20015121
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  20015049 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 20015121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23820109 - 23820181
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  23820109 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 23820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 19689599 - 19689554
Alignment:
Q  28 caatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19689599 caatcataacatataatcatacactccatcataattcaacaacaac 19689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 20627609 - 20627489
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||| ||  |||||||||||||||||||||||| | |||| | |||| || | |    
T  20627609 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaacca 20627510  T
Q  199 caacatcaattgcacaagaat 219  Q
     || |||||||| ||||||||    
T  20627509 taaaatcaattgaacaagaat 20627489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 17396948 - 17396882
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaat 166  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | |||||||||||    
T  17396948 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaat 17396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 19669335 - 19669279
Alignment:
Q  154 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 210  Q
    |||||||||| |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  19669335 atacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 32465813 - 32465845
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    ||||||| |||||||||||||||||||||||||    
T  32465813 caattcataaatttcaccaaaacaccaacaaca 32465845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 9338 - 9480
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  9338 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 9437  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
T  9438 attaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 19173 - 19315
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
T  19173 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 19272  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     ||||||||||| ||| |||||||| ||||||||||| |||||    
T  19273 taacatcaattgaacaggaatcataactcaattcaacaacaac 19315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 21257 - 21399
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
T  21257 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 21356  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     ||||||||||| ||| |||||||| ||||||||||| |||||    
T  21357 taacatcaattgaacaggaatcataactcaattcaacaacaac 21399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 27182854 - 27182712
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||| | ||||||     
T  27182854 caattcaaaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatca 27182755  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
T  27182754 attaacagccataacatcaattgaacaagaatcataactcaat 27182712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 22054125 - 22053987
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 202  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||||| | |||||| |||| || ||| |||    
T  22054125 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataac 22054026  T
Q  203 atcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    |||||||| ||| |||||||| ||||||||||| |||||    
T  22054025 atcaattgaacatgaatcatatctcaattcaacaacaac 22053987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 18531355 - 18531221
Alignment:
Q  107 aaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatca 206  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||| |||| || ||| |||||||    
T  18531355 aaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatca 18531256  T
Q  207 attgcacaagaatcatagctcaattcaactacaac 241  Q
    |||| ||| |||||||| ||||||||||| |||||    
T  18531255 attgaacatgaatcatatctcaattcaacaacaac 18531221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 23506932 - 23507054
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
T  23506932 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 23507031  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  23507032 taacatcaattgaacaagaatca 23507054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 17471887 - 17471768
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 188  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||  || ||||||||      
T  17471887 aattcaccaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcag 17471788  T
Q  189 ttagcatcaacaacatcaat 208  Q
    ||| ||  ||||||||||||    
T  17471787 ttaacaataacaacatcaat 17471768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 34939248 - 34939379
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 201  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  34939248 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataa 34939347  T
Q  202 catcaattgcacaagaatcatagctcaattca 233  Q
    |||||| || |||||||||||| |||||||||    
T  34939348 catcaactgaacaagaatcataactcaattca 34939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 12342 - 12463
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  12342 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 12440  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  12441 taacatcatttgaacaagaatca 12463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 21073879 - 21073758
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  21073879 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattga 21073781  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  21073780 taacatcatttgaacaagaatca 21073758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 25426596 - 25426717
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  25426596 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25426694  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  25426695 taacatcatttgaacaagaatca 25426717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 29190552 - 29190478
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactat 180  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||    
T  29190552 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactat 29190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 18778276 - 18778200
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  18778276 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaa 18778200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 22366765 - 22366689
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  22366765 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaa 22366689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20623007 - 20623079
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20623007 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 20623079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21233753 - 21233681
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21233753 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 21233681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 19499867 - 19499988
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||  |||| ||| | || |||  |    
T  19499867 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattca 19499965  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  19499966 taacatcatttgaacaagaatca 19499988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 241
Target Start/End: Complemental strand, 43443679 - 43443538
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  43443679 tttcaccaaaacaccaaca-caattcaaatcctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43443581  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     ||||||| ||| |||||| ||| | ||||| ||||| |||||    
T  43443580 taacatcatttgaacaagactcacatctcaaatcaacaacaac 43443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25900630 - 25900558
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  25900630 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 25900558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37052782 - 37052854
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  37052782 aatgagatcaacatcatcaatcaaccacaatcataacatataatcataccctccatcataactcaacaacaac 37052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 4200251 - 4200126
Alignment:
Q  118 acaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaaga 217  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| ||    
T  4200251 acaattcaaattctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatga 4200152  T
Q  218 atcatagctcaattcaactacaacat 243  Q
    |||| | ||||| ||||| |||||||    
T  4200151 atcacatctcaaatcaacaacaacat 4200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16536235 - 16536307
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  ||||||||||||| |||||||| |||||||||||||||||||||||    
T  16536235 aatgagatcaacatcatcaatcaactacaatcataacatacaatcataccctccatcataattcaacaacaac 16536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 27009809 - 27009882
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||||||    
T  27009809 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcat 27009882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 19862186 - 19862319
Alignment:
Q  110 caccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 208  Q
    |||||||||||| |||  |||||||||||||  ||||||  ||| | |||||||  |||| |||||||| |||| |||  |||||| |||||||||||||    
T  19862186 caccaacaacaactcat-ttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaat 19862284  T
Q  209 tgcacaagaatcatagctcaattcaactacaacat 243  Q
    |||||| || || || | ||||||||| |||||||    
T  19862285 tgcacatgattcttatcacaattcaacaacaacat 19862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 23493885 - 23494029
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatca 197  Q
    |||||||||| || ||||||||| | |  |||||||||||||  ||||||  ||| | |||||||| |||| |||||| | | ||||||  |||||| ||    
T  23493885 tttcaccaaaccaacaacaacaacttat-ttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 23493983  T
Q  198 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  23493984 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 23153403 - 23153545
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||| |||||||||||||| | ||||||     
T  23153403 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatca 23153502  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
    |||| || | | || |||||||| |||||||||||| ||||||    
T  23153503 attaacagccataatatcaattgaacaagaatcataactcaat 23153545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 35009735 - 35009624
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
T  35009735 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa 35009636  T
Q  199 caacatcaattg 210  Q
    ||||||||||||    
T  35009635 caacatcaattg 35009624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 1658040 - 1657909
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 201  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  1658040 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 1657941  T
Q  202 catcaattgcacaagaatcatagctcaattca 233  Q
    |||||| || |||||||||||| |||||||||    
T  1657940 catcaactgaacaagaatcataactcaattca 1657909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 14626407 - 14626292
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  14626407 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 14626308  T
Q  206 aattgcacaagaatca 221  Q
    |||||  |||||||||    
T  14626307 aattgagcaagaatca 14626292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 1650382 - 1650267
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||    
T  1650382 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 1650283  T
Q  206 aattgcacaagaatca 221  Q
    |||||  |||||||||    
T  1650282 aattgagcaagaatca 1650267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 15862443 - 15862573
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 201  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  15862443 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataa 15862542  T
Q  202 catcaattgcacaagaatcatagctcaattca 233  Q
    ||| || || |||||||||||| |||||||||    
T  15862543 cat-aaatgaacaagaatcataactcaattca 15862573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 25175531 - 25175652
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  25175531 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25175629  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||| ||| ||||||||||    
T  25175630 taacatcatttgaacaagaatca 25175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 27740808 - 27740941
Alignment:
Q  102 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 201  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||| ||| |||||||| | |||||||||| || | ||||||   ||  | |||| |    
T  27740808 caccaaaacaccaacaccaattcaaattttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaacca 27740907  T
Q  202 catcaattgcacaagaatcatagctcaattcaac 235  Q
    ||||||||| ||| |||||||| |||||||||||    
T  27740908 catcaattgaacatgaatcatatctcaattcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 16826038 - 16825962
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| | ||||||| |||||||||    
T  16826038 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataacaaagcaattattcatcaa 16825962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 27654267 - 27654191
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||    
T  27654267 tttcaccaaaacaccgaca-caattcaaattctcatcattaatccatgaatatgcatacccaagcaattattcatcaa 27654191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 242
Target Start/End: Complemental strand, 18381975 - 18381821
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 186  Q
    |||||||| |||||||| ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||| | ||||||    
T  18381975 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatc 18381877  T
Q  187 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 242  Q
      |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381876 acttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 22362032 - 22361926
Alignment:
Q  113 caacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgc 211  Q
    ||||||||| |||| |||||||||||||| ||||||  ||| | |||||||| |||| |||||||| | || |||  |||||| |||||||||||||||     
T  22362032 caacaacaactcaa-ttctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattga 22361934  T
Q  212 acaagaat 219  Q
    ||| ||||    
T  22361933 acatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 15889914 - 15889853
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||||||||| ||| || ||| ||||||||| || ||||||| |||||| |||||||    
T  15889914 catcaacaatcaaccacaaccacaacttataatcatgcattccatcacaattcatcaacaac 15889853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 32898745 - 32898774
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaaca 117  Q
    ||||||||||||||||||||||||||||||    
T  32898745 caattcacaaatttcaccaaaacaccaaca 32898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 25367490 - 25367374
Alignment:
Q  128 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 226  Q
    ||||||||| |||| |||||| |||| | |||||||| |||| | ||| |  | ||||||  |||||| ||||||||||||||| ||| ||||| || |     
T  25367490 ttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatca 25367391  T
Q  227 caattcaactacaacat 243  Q
    ||||||||| |||||||    
T  25367390 caattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 20445646 - 20445788
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | |    
T  20445646 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20445745  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     |||||||||||  ||||||||||| | ||||||||| |||||    
T  20445746 taacatcaattgatcaagaatcataacacaattcaacaacaac 20445788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 20531411 - 20531553
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | |    
T  20531411 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20531510  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     |||||||||||  ||||||||||| | ||||||||| |||||    
T  20531511 taacatcaattgatcaagaatcataacacaattcaacaacaac 20531553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 20893933 - 20893798
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||| ||||||||||||||| | ||||||     
T  20893933 caattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatca 20893834  T
Q  188 attagcatcaacaacatcaattgcacaagaatcata 223  Q
    |||| ||   | ||||||||||| ||||||||||||    
T  20893833 attaacagtcataacatcaattgaacaagaatcata 20893798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 20913004 - 20913126
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | || ||| |||| || | |    
T  20913004 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca 20913103  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  20913104 taacatcaattgaacaagaatca 20913126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 2116228 - 2116343
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  2116228 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 2116327  T
Q  206 aattgcacaagaatca 221  Q
    |||||  |||||||||    
T  2116328 aattgagcaagaatca 2116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 20931312 - 20931434
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||| |||||||||| | |||||| |||| || | |    
T  20931312 tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca 20931411  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  20931412 taacatcaattgaacaagaatca 20931434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 37844746 - 37844616
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | |    
T  37844746 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaacca 37844648  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  37844647 taacatcaattgaacaagaatcataactcaat 37844616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 22227777 - 22227898
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
T  22227777 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22227875  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  22227876 taacatcaattgaacaagaatca 22227898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 22232474 - 22232595
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
T  22232474 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22232572  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  22232573 taacatcaattgaacaagaatca 22232595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 41394191 - 41394311
Alignment:
Q  102 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| |||||||| || |||||||||||| | |||||| | || || ||| |    
T  41394191 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaata 41394290  T
Q  201 acatcaattgcacaagaatca 221  Q
    ||||||||||  |||||||||    
T  41394291 acatcaattgagcaagaatca 41394311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 45051416 - 45051496
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| ||||||||    
T  45051416 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc 45051496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 51452530 - 51452602
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  51452530 aatgagatcaacatcatcaatcaactacaatcataacatataatcatacactccatcataattcaacaacaac 51452602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 5072672 - 5072599
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  5072672 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 5072599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 18601402 - 18601329
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  18601402 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 18601329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 49967607 - 49967638
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaaca 120  Q
    ||||||||||||||||||||||||||||||||    
T  49967607 aattcacaaatttcaccaaaacaccaacaaca 49967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 48565 - 48696
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | |    
T  48565 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 48664  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  48665 taacatcaattgaacaagaatcataactcaat 48696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 36065 - 36137
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  36065 accataacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaa 36137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 241
Target Start/End: Complemental strand, 37209 - 37067
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
T  37209 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca 37110  T
Q  199 caacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
     ||| ||||||| |||||| ||||| |||||| |||| |||||    
T  37109 taacgtcaattgaacaagattcataactcaatccaaccacaac 37067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 8820 - 8958
Alignment:
Q  103 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 202  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||  | ||| |||    
T  8820 accaaaacaccaacaaaaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataac 8919  T
Q  203 atcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    |||||||| |||  ||||||| ||||||||||| |||||    
T  8920 atcaattgaacattaatcatatctcaattcaacaacaac 8958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 148688 - 148810
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||| | ||| || |||| || | |    
T  148688 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca 148787  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  148788 taacatcaattgaacaagaatca 148810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 128464 - 128332
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||| |||||||||  | |||||| |||| |||| |    
T  128464 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca 128365  T
Q  199 caacatcaattgcacaagaatcatagctcaatt 231  Q
     ||||||||||| |||||||||| | |||||||    
T  128364 taacatcaattgaacaagaatcaaatctcaatt 128332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 31942 - 31819
Alignment:
Q  118 acaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaaga 217  Q
    |||||||||||||||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||  | || |||  | ||||||||||| ||| ||    
T  31942 acaattcaaattctcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatga 31843  T
Q  218 atcatagctcaattcaactacaac 241  Q
    |||| | ||||| ||||| |||||    
T  31842 atcacatctcaaatcaacaacaac 31819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 22650 - 22678
Alignment:
Q  92 tcacaaatttcaccaaaacaccaacaaca 120  Q
    |||||||||||||||||||||||||||||    
T  22650 tcacaaatttcaccaaaacaccaacaaca 22678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 41622 - 41726
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||  ||| || ||||||||||    
T  41622 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatc 41721  T
Q  206 aattg 210  Q
    |||||    
T  41722 aattg 41726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 123460 - 123336
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||| || |||||||||| | |||||| |||| || | |    
T  123460 tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca 123361  T
Q  199 caacatcaattgcacaagaatcata 223  Q
     ||||||||||| ||||||||||||    
T  123360 taacatcaattgaacaagaatcata 123336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 255106 - 255074
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    ||||||||||||||||| |||||||||||||||    
T  255106 caattcacaaatttcacgaaaacaccaacaaca 255074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 261712 - 261680
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    ||||||||||||||||| |||||||||||||||    
T  261712 caattcacaaatttcacgaaaacaccaacaaca 261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 247738 - 247607
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   |    
T  247738 tttcaccaaaacaccaacaaccattcaaattctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 247639  T
Q  199 caacatcaattgcacaagaatcatagctcaat 230  Q
     ||||||||||| |||||||||||| ||||||    
T  247638 taacatcaattgaacaagaatcataactcaat 247607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 828 - 706
Alignment:
Q  101 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    ||||||||||||||||||| ||||||||||||||| ||||| | |||| ||| |||||||||||||||||||||||| | |||||| ||||||| | | |    
T  828 tcaccaaaacaccaacaaccattcaaattctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccata 729  T
Q  201 acatcaattgcacaagaatcata 223  Q
    |||||||||  ||||||||||||    
T  728 acatcaattaaacaagaatcata 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 8846 - 8967
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||  | |||||| |||| |||| |    
T  8846 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatcca 8944  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  8945 taacatcaattgaacaagaatca 8967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 1091 - 1213
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||| |||||||||| | || ||| |||| || | |    
T  1091 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaacca 1190  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  1191 taacatcaattgaacaagaatca 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 3877 - 3756
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||| || ||| ||||||||||||| |||| ||||  | |||||| |||| |||| |    
T  3877 tttcaccaaaacaccaaca-caattcaaactctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatcca 3779  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  3778 taacatcaattgaacaagaatca 3756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 41686 - 41827
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 187  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||| ||| |||||||| ||||||||||||| ||| |||| |     
T  41686 caattcacaa-tttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaaca 41784  T
Q  188 attagcatcaacaacatcaattgcacaagaatcatagctcaat 230  Q
    |||| || | | | ||||||||| |||||||||||| ||||||    
T  41785 attaacagccatagcatcaattgaacaagaatcataactcaat 41827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 48155 - 48276
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||  | |||||| |||| |||| |    
T  48155 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatcta 48253  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  48254 taacatcaattgaacaagaatca 48276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 12083 - 12214
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||  |||||||| |||| |||  |    
T  12083 tttcactaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattca 12181  T
Q  199 caacatcaattgcacaagaatcatagctcaatt 231  Q
     ||||||||||| |||||||||| | |||||||    
T  12182 taacatcaattgaacaagaatcaaatctcaatt 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 9626 - 9511
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  9626 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 9527  T
Q  206 aattgcacaagaatca 221  Q
    | |||  |||||||||    
T  9526 atttgagcaagaatca 9511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 16524 - 16409
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  16524 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 16425  T
Q  206 aattgcacaagaatca 221  Q
    | |||  |||||||||    
T  16424 atttgagcaagaatca 16409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 107715 - 107836
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  | |||||| |||| |||| |    
T  107715 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatcca 107813  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  107814 taacatcaattgaacaagaatca 107836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 64812 - 64739
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||||||    
T  64812 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcat 64739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 5356 - 5228
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||  | |||||| |||| || | |    
T  5356 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 5258  T
Q  199 caacatcaattgcacaagaatcatagctca 228  Q
     ||||||||||| |||||||||||| ||||    
T  5257 taacatcaattgaacaagaatcataactca 5228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 6358 - 6227
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||   |||| |||| |    
T  6358 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatcca 6260  T
Q  199 caacatcaattgcacaagaatcatagctcaatt 231  Q
     ||||||| ||| |||||||||| | |||||||    
T  6259 taacatcacttgaacaagaatcaaatctcaatt 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 1250 - 1131
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||  |||||||  |||| |||| |    
T  1250 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatcca 1152  T
Q  199 caacatcaattgcacaagaat 219  Q
     ||||||| ||| ||||||||    
T  1151 taacatcacttgaacaagaat 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 48482 - 48603
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||| |    
T  48482 tttcatcaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatcca 48580  T
Q  199 caacatcaattgcacaagaatca 221  Q
     |||||||| || ||||||||||    
T  48581 taacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 34755 - 34614
Alignment:
Q  102 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 200  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||| | |||||||||||| | |||||| | || || ||| |    
T  34755 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaata 34656  T
Q  201 acatcaatt-gcacaagaatcatagctcaattcaactacaac 241  Q
    |||||||||   ||| |||||||| ||||||||||| |||||    
T  34655 acatcaattaaaacatgaatcatatctcaattcaacaacaac 34614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 2936 - 3072
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||| |||||| |||||||||||| | |||||| | || || ||| ||||||    
T  2936 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 3035  T
Q  206 aatt-gcacaagaatcatagctcaattcaactacaac 241  Q
    ||||   ||| |||||||| ||||||||||| |||||    
T  3036 aattaaaacatgaatcatatctcaattcaacaacaac 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 8466 - 8362
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    ||||||||| |||||||||||||||||||||||||| |||| | ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||    
T  8466 aaaacaccagcaacaattcaaattctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 8367  T
Q  206 aattg 210  Q
    |||||    
T  8366 aattg 8362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 26710 - 26582
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||| |||||||||||||||| | |||||||||||| ||||| ||| || ||| |||||||||||||||||||||||  | |||||| |||| || | |    
T  26710 tttcatcaaaacaccaacaacact-caaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 26612  T
Q  199 caacatcaattgcacaagaatcatagctca 228  Q
     ||||||||||| |||||||||||| ||||    
T  26611 taacatcaattgaacaagaatcataactca 26582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 147 - 26
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
T  147 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 49  T
Q  199 caacatcaattgcacaagaatca 221  Q
     || |||| ||| ||||||||||    
T  48 taatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 3690 - 3811
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||| | ||||||| ||| |||||||||  |||||||| |||| |||  |    
T  3690 tttcaccaaaacatcaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattca 3788  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  3789 taacatcaattgaacaagaatca 3811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 13480 - 13584
Alignment:
Q  106 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 205  Q
    |||||||| |||| |||||||||||||||| ||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||||||||||    
T  13480 aaaacacctacaaaaattcaaattctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatc 13579  T
Q  206 aattg 210  Q
    |||||    
T  13580 aattg 13584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 5498 - 5378
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||| ||  | |||||| |||| |||  |    
T  5498 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattca 5401  T
Q  199 caacatcaattgcacaagaatca 221  Q
     ||||||||||| ||||||||||    
T  5400 taacatcaattgaacaagaatca 5378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 42965 - 43041
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  42965 tttcaccaaaacaccaaca-caatttaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaa 43041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22578 - 22650
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  22578 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 22650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26833 - 26905
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  26833 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 26905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1807 - 1735
Alignment:
Q  1 aatgagatggacatcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    ||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  1807 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 241
Target Start/End: Original strand, 271983 - 272134
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 188  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||   | |||| |||||| ||| |||||||||||||||||||||||| | |||||| |    
T  271983 aattcactaatttcacaaaaccaccaacaacaatccat-ttctctataacaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 272081  T
Q  189 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||| || | | |||| |||||| |||||||||||| |||||| |||| |||||    
T  272082 ttaacagctataacaccaattgaacaagaatcataactcaatccaaccacaac 272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 241
Target Start/End: Original strand, 171863 - 172014
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 188  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||| | || |||  |||||| ||| ||||| |||||||||||||||||| | |||||| |    
T  171863 aattcaccaatttcacaaaaccaccaacaacaatccat-ttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 171961  T
Q  189 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| |||||    
T  171962 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaac 172014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 241
Target Start/End: Original strand, 177566 - 177717
Alignment:
Q  89 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 188  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||| | || |||  |||||| ||| ||||| |||||||||||||||||| | |||||| |    
T  177566 aattcaccaatttcacaaaaccaccaacaacaatccat-ttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 177664  T
Q  189 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 241  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| |||||    
T  177665 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaac 177717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 70914 - 70882
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaaca 120  Q
    |||||||||||||||||||||||||||||||||    
T  70914 caattcacaaatttcaccaaaacaccaacaaca 70882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 14344 - 14258
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 186  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||| |||||||||  ||||||||    
T  14344 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatc 14258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 21399 - 21279
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 198  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||||| ||| | || |||||||| |||||||||  |||||||| | || |||  |    
T  21399 tttcaccaaaacaccaaca-cagttcaaattttcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattca 21301  T
Q  199 caacatcaattgcacaagaatc 220  Q
     ||||||||||| |||||||||    
T  21300 taacatcaattgaacaagaatc 21279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 1815 - 1863
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa 148  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1815 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaa 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 3183 - 3252
Alignment:
Q  107 aaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 176  Q
    |||||||||||||||||| ||||||| |||||||| |||||| |||  ||||||| ||||||||||||||    
T  3183 aaacaccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaa 3252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 3 - 76
Alignment:
Q  99 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 173  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| |||||| ||| | ||||||||||| ||||||    
T  3 tttcaccaaaacaccaaca-caactcaaattctcatcaacaattcatgaatatgcaaacccaagcaattattcat 76  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 243
Target Start/End: Complemental strand, 77139 - 76984
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 186  Q
    |||||||| |||||||| ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||  | || |||    
T  77139 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatc 77041  T
Q  187 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 243  Q
      |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  77040 acttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacat 76984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 132542 - 132420
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatc 186  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| || ||| ||||||| |||| | |||||||| |||| | |||| | | |||||     
T  132542 caattcacaaatttcaccaaaacaccaacaacatttc-atttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 132444  T
Q  187 tattagcatcaacaacatcaattg 210  Q
      ||| || |||||||||||||||    
T  132443 acttaacaacaacaacatcaattg 132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 249
Target Start/End: Original strand, 54412 - 54533
Alignment:
Q  128 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 227  Q
    |||||||||||||||||| || ||||||||||||   |||||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  54412 ttctcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 54511  T
Q  228 aattcaactacaacatgtcaaa 249  Q
    | |||||| ||||||| |||||    
T  54512 atttcaacaacaacatatcaaa 54533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 45007 - 45051
Alignment:
Q  128 ttctcatcatcaatccatgaacatgtatacccaagcaatgattca 172  Q
    |||||||||||||||||| || |||||||||||||  ||||||||    
T  45007 ttctcatcatcaatccataaatatgtatacccaagtcatgattca 45051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 79533 - 79616
Alignment:
Q  128 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 210  Q
    ||||||||| |||| ||||||  ||| |||||||||| |||| |||||||| |||| |||  |||||| |||||||||||||||    
T  79533 ttctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg 79616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 1089 - 1028
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    |||||||||| |||| ||| || ||| ||||||||| || ||||||||| ||||||||||||    
T  1089 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaac 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 7522 - 7551
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaaca 117  Q
    ||||||||||||||||||||||||||||||    
T  7522 caattcacaaatttcaccaaaacaccaaca 7551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 45876 - 45815
Alignment:
Q  12 catcaacaatcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 73  Q
    |||||||||| |||| ||| || ||| ||||||||| || ||||||||| ||||||||||||    
T  45876 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaac 45815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 38253 - 38282
Alignment:
Q  88 caattcacaaatttcaccaaaacaccaaca 117  Q
    ||||||||||||||||||||||||||||||    
T  38253 caattcacaaatttcaccaaaacaccaaca 38282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 2476 - 2532
Alignment:
Q  154 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 210  Q
    |||||||||| |||| |||||||| | ||||||  |||||| |||||||||||||||    
T  2476 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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