View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12605_low_12 (Length: 252)

Name: NF12605_low_12
Description: NF12605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12605_low_12
NF12605_low_12
[»] chr3 (47 HSPs)
chr3 (4-252)||(16743991-16744239)
chr3 (54-252)||(13839033-13839232)
chr3 (54-252)||(12030073-12030271)
chr3 (54-252)||(14842487-14842685)
chr3 (54-234)||(2049967-2050147)
chr3 (6-190)||(19231982-19232169)
chr3 (128-252)||(2449238-2449362)
chr3 (118-252)||(51158008-51158142)
chr3 (128-252)||(17912483-17912606)
chr3 (54-174)||(19260749-19260869)
chr3 (102-252)||(15858996-15859148)
chr3 (128-252)||(13975722-13975845)
chr3 (128-252)||(45860945-45861068)
chr3 (135-252)||(15936634-15936751)
chr3 (128-252)||(13954890-13955013)
chr3 (11-89)||(15857120-15857198)
chr3 (6-86)||(3992873-3992953)
chr3 (6-86)||(55513193-55513273)
chr3 (6-86)||(2844514-2844594)
chr3 (135-252)||(15938476-15938593)
chr3 (6-86)||(54037976-54038056)
chr3 (6-86)||(17955832-17955916)
chr3 (6-86)||(7854305-7854385)
chr3 (140-252)||(55316359-55316471)
chr3 (162-240)||(16821291-16821369)
chr3 (25-86)||(45581954-45582016)
chr3 (53-252)||(15614973-15615170)
chr3 (140-252)||(41270215-41270327)
chr3 (144-185)||(14080715-14080756)
chr3 (13-70)||(17205019-17205076)
chr3 (13-68)||(12031849-12031904)
chr3 (54-207)||(54651642-54651796)
chr3 (13-70)||(17191879-17191936)
chr3 (13-70)||(38810868-38810925)
chr3 (54-86)||(13954804-13954836)
chr3 (54-86)||(45861122-45861154)
chr3 (13-70)||(3576290-3576347)
chr3 (13-70)||(13301323-13301380)
chr3 (13-70)||(13311979-13312036)
chr3 (54-86)||(2449152-2449184)
chr3 (135-207)||(11986173-11986245)
chr3 (54-86)||(16261777-16261809)
chr3 (54-86)||(16933869-16933901)
chr3 (54-86)||(17912398-17912430)
chr3 (54-86)||(23492696-23492728)
chr3 (54-86)||(38168237-38168269)
chr3 (54-86)||(53771365-53771397)
[»] chr1 (21 HSPs)
chr1 (4-252)||(41394361-41394609)
chr1 (54-252)||(20913169-20913367)
chr1 (54-252)||(20931484-20931682)
chr1 (54-224)||(37844374-37844546)
chr1 (54-224)||(20445846-20446019)
chr1 (54-252)||(20893551-20893750)
chr1 (54-224)||(20531611-20531783)
chr1 (128-252)||(51452631-51452755)
chr1 (6-86)||(21860334-21860414)
chr1 (12-86)||(44034829-44034903)
chr1 (140-252)||(2116394-2116506)
chr1 (53-252)||(45051562-45051759)
chr1 (6-71)||(41218743-41218808)
chr1 (13-84)||(27675120-27675191)
chr1 (55-252)||(22227948-22228146)
chr1 (55-252)||(22232645-22232843)
chr1 (140-252)||(5072388-5072500)
chr1 (140-252)||(18601118-18601230)
chr1 (13-70)||(13376711-13376768)
chr1 (13-70)||(20177513-20177570)
chr1 (144-185)||(22143361-22143402)
[»] chr2 (27 HSPs)
chr2 (6-241)||(20627190-20627426)
chr2 (6-230)||(43642833-43643059)
chr2 (54-252)||(462877-463075)
chr2 (6-252)||(19794581-19794828)
chr2 (54-252)||(36982364-36982565)
chr2 (54-252)||(8891381-8891581)
chr2 (128-252)||(19689401-19689525)
chr2 (128-252)||(23820210-23820334)
chr2 (128-252)||(14906440-14906564)
chr2 (128-252)||(20015150-20015274)
chr2 (54-252)||(24341309-24341513)
chr2 (128-252)||(17396653-17396776)
chr2 (128-252)||(25265390-25265514)
chr2 (54-150)||(22863169-22863267)
chr2 (6-86)||(22275045-22275125)
chr2 (6-86)||(22284278-22284358)
chr2 (6-85)||(15633538-15633617)
chr2 (178-252)||(7507894-7507968)
chr2 (13-70)||(43646232-43646289)
chr2 (140-252)||(19886661-19886773)
chr2 (54-86)||(17396567-17396599)
chr2 (13-65)||(19660221-19660273)
chr2 (53-86)||(19689314-19689347)
chr2 (13-70)||(25305769-25305826)
chr2 (54-86)||(9652796-9652828)
chr2 (54-86)||(14906354-14906386)
chr2 (54-86)||(23820388-23820420)
[»] chr4 (27 HSPs)
chr4 (6-230)||(54118120-54118346)
chr4 (54-252)||(122028-122226)
chr4 (54-252)||(13246569-13246769)
chr4 (128-252)||(26680339-26680463)
chr4 (128-252)||(10488701-10488825)
chr4 (54-252)||(15675009-15675213)
chr4 (128-252)||(16327926-16328050)
chr4 (54-252)||(10104170-10104374)
chr4 (54-190)||(33240901-33241043)
chr4 (128-252)||(13048221-13048345)
chr4 (6-86)||(25119059-25119139)
chr4 (155-252)||(31115768-31115865)
chr4 (144-251)||(10644360-10644467)
chr4 (6-86)||(5682380-5682460)
chr4 (54-160)||(31132545-31132657)
chr4 (144-252)||(40885570-40885679)
chr4 (140-252)||(47357794-47357906)
chr4 (13-70)||(41165808-41165865)
chr4 (13-70)||(47534933-47534990)
chr4 (54-86)||(7850314-7850346)
chr4 (145-185)||(13809511-13809551)
chr4 (54-86)||(14952085-14952117)
chr4 (54-86)||(15135907-15135939)
chr4 (54-86)||(15272211-15272243)
chr4 (54-86)||(16327840-16327872)
chr4 (54-86)||(16609013-16609045)
chr4 (54-86)||(26680517-26680549)
[»] scaffold0266 (2 HSPs)
scaffold0266 (54-252)||(1263-1462)
scaffold0266 (54-252)||(3508-3706)
[»] chr7 (36 HSPs)
chr7 (13-241)||(3060116-3060344)
chr7 (54-252)||(16211905-16212103)
chr7 (54-252)||(13036938-13037138)
chr7 (54-252)||(36052803-36053003)
chr7 (54-252)||(11580661-11580863)
chr7 (128-252)||(11516366-11516490)
chr7 (128-252)||(15441564-15441688)
chr7 (128-252)||(30262129-30262253)
chr7 (128-252)||(7293155-7293279)
chr7 (128-252)||(25292338-25292462)
chr7 (128-252)||(47481031-47481155)
chr7 (135-252)||(18253842-18253959)
chr7 (129-252)||(13321153-13321278)
chr7 (6-86)||(32493898-32493978)
chr7 (6-86)||(126738-126818)
chr7 (144-252)||(13572816-13572924)
chr7 (56-249)||(295893-296087)
chr7 (146-252)||(16478968-16479074)
chr7 (6-86)||(1936869-1936949)
chr7 (6-86)||(111121-111201)
chr7 (140-252)||(10989549-10989661)
chr7 (140-252)||(13911024-13911136)
chr7 (139-252)||(2437597-2437710)
chr7 (6-85)||(7283908-7283987)
chr7 (128-170)||(14113989-14114031)
chr7 (128-170)||(14423639-14423681)
chr7 (13-70)||(13377867-13377924)
chr7 (13-70)||(13389693-13389750)
chr7 (13-69)||(16919870-16919926)
chr7 (54-86)||(2029244-2029276)
chr7 (54-86)||(7293333-7293365)
chr7 (54-86)||(11516544-11516576)
chr7 (54-86)||(14113903-14113935)
chr7 (54-86)||(15441478-15441510)
chr7 (54-86)||(30262043-30262075)
chr7 (54-86)||(42056188-42056220)
[»] chr8 (29 HSPs)
chr8 (6-230)||(16404852-16405077)
chr8 (54-252)||(16193643-16193840)
chr8 (54-252)||(24928716-24928915)
chr8 (54-252)||(43373392-43373592)
chr8 (128-252)||(5238226-5238350)
chr8 (128-252)||(22907214-22907338)
chr8 (128-252)||(24661248-24661372)
chr8 (128-252)||(43685685-43685809)
chr8 (6-86)||(274766-274846)
chr8 (6-86)||(641003-641083)
chr8 (6-86)||(826809-826889)
chr8 (128-252)||(17345708-17345832)
chr8 (6-86)||(24716714-24716794)
chr8 (140-252)||(6774258-6774370)
chr8 (144-252)||(21844576-21844684)
chr8 (140-252)||(24549121-24549233)
chr8 (144-252)||(21851969-21852077)
chr8 (140-252)||(30120862-30120974)
chr8 (6-86)||(39115598-39115678)
chr8 (140-252)||(16674392-16674504)
chr8 (13-70)||(17285543-17285600)
chr8 (13-70)||(21198005-21198062)
chr8 (144-185)||(23149985-23150026)
chr8 (144-185)||(23226076-23226117)
chr8 (54-86)||(5238404-5238436)
chr8 (54-86)||(22907128-22907160)
chr8 (54-86)||(24385652-24385684)
chr8 (54-86)||(24661162-24661194)
chr8 (54-86)||(43685863-43685895)
[»] scaffold0023 (2 HSPs)
scaffold0023 (54-252)||(48737-48935)
scaffold0023 (162-252)||(36233-36323)
[»] scaffold0018 (1 HSPs)
scaffold0018 (56-252)||(51110-51306)
[»] scaffold0106 (1 HSPs)
scaffold0106 (54-241)||(41879-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (54-252)||(882-1080)
[»] scaffold0077 (2 HSPs)
scaffold0077 (53-252)||(36836-37037)
scaffold0077 (6-70)||(15319-15383)
[»] scaffold0001 (2 HSPs)
scaffold0001 (54-252)||(172044-172242)
scaffold0001 (54-252)||(177747-177945)
[»] chr5 (31 HSPs)
chr5 (54-252)||(23507104-23507302)
chr5 (54-252)||(27182471-27182671)
chr5 (128-252)||(20623108-20623232)
chr5 (128-252)||(21233528-21233652)
chr5 (128-252)||(37052883-37053007)
chr5 (54-252)||(18530988-18531191)
chr5 (128-252)||(16536336-16536460)
chr5 (54-252)||(22053753-22053957)
chr5 (130-252)||(25900408-25900530)
chr5 (128-252)||(34939416-34939540)
chr5 (140-252)||(29188284-29188396)
chr5 (144-252)||(27009981-27010089)
chr5 (143-252)||(43443398-43443507)
chr5 (140-252)||(4199985-4200097)
chr5 (140-252)||(19500039-19500151)
chr5 (140-252)||(22366481-22366593)
chr5 (140-252)||(25426768-25426880)
chr5 (11-70)||(11584389-11584448)
chr5 (143-252)||(18777995-18778104)
chr5 (140-252)||(12514-12626)
chr5 (140-252)||(21073595-21073707)
chr5 (13-70)||(21222462-21222519)
chr5 (13-70)||(5450695-5450752)
chr5 (144-185)||(21310709-21310750)
chr5 (144-185)||(23981516-23981557)
chr5 (54-86)||(16105967-16105999)
chr5 (54-86)||(20623286-20623318)
chr5 (54-86)||(21233442-21233474)
chr5 (54-86)||(25900320-25900352)
chr5 (135-207)||(32950879-32950951)
chr5 (54-86)||(37053061-37053093)
[»] scaffold0413 (1 HSPs)
scaffold0413 (54-239)||(5990-6175)
[»] chr6 (24 HSPs)
chr6 (54-252)||(23153586-23153786)
chr6 (55-252)||(14626045-14626242)
chr6 (128-252)||(1657748-1657872)
chr6 (128-252)||(15862610-15862734)
chr6 (128-252)||(35009439-35009563)
chr6 (6-86)||(19983144-19983224)
chr6 (6-86)||(35015009-35015089)
chr6 (54-123)||(23148266-23148335)
chr6 (53-252)||(1650020-1650217)
chr6 (6-86)||(18583640-18583720)
chr6 (128-211)||(27751605-27751688)
chr6 (13-70)||(21623506-21623563)
chr6 (140-252)||(25175703-25175815)
chr6 (140-252)||(27653983-27654095)
chr6 (13-70)||(22361619-22361676)
chr6 (128-225)||(29666040-29666137)
chr6 (140-252)||(16825752-16825866)
chr6 (144-185)||(16887792-16887833)
chr6 (144-185)||(33324898-33324939)
chr6 (144-185)||(35136013-35136054)
chr6 (13-85)||(14152632-14152704)
chr6 (54-86)||(18002395-18002427)
chr6 (54-86)||(23995247-23995279)
chr6 (54-86)||(26090059-26090091)
[»] scaffold0008 (2 HSPs)
scaffold0008 (54-234)||(128095-128275)
scaffold0008 (162-252)||(31697-31787)
[»] scaffold0302 (1 HSPs)
scaffold0302 (54-252)||(12252-12450)
[»] scaffold0162 (3 HSPs)
scaffold0162 (54-252)||(26340-26539)
scaffold0162 (128-252)||(8180-8304)
scaffold0162 (13-70)||(6877-6934)
[»] scaffold0012 (1 HSPs)
scaffold0012 (54-252)||(247366-247566)
[»] scaffold0195 (2 HSPs)
scaffold0195 (57-252)||(19345-19543)
scaffold0195 (128-252)||(21429-21553)
[»] scaffold0028 (3 HSPs)
scaffold0028 (54-230)||(89378-89556)
scaffold0028 (54-179)||(107708-107835)
scaffold0028 (144-185)||(79745-79786)
[»] scaffold0011 (1 HSPs)
scaffold0011 (54-252)||(123087-123288)
[»] scaffold0009 (1 HSPs)
scaffold0009 (54-252)||(272164-272362)
[»] scaffold0218 (1 HSPs)
scaffold0218 (64-252)||(4996-5185)
[»] scaffold0498 (1 HSPs)
scaffold0498 (54-240)||(9029-9215)
[»] scaffold0141 (4 HSPs)
scaffold0141 (128-252)||(26934-27058)
scaffold0141 (135-252)||(22679-22796)
scaffold0141 (54-86)||(22857-22889)
scaffold0141 (54-86)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (128-252)||(1582-1706)
scaffold0124 (54-86)||(1496-1528)
[»] scaffold0078 (3 HSPs)
scaffold0078 (128-252)||(37066-37190)
scaffold0078 (6-86)||(41632-41712)
scaffold0078 (54-86)||(36980-37012)
[»] scaffold0772 (2 HSPs)
scaffold0772 (135-252)||(5668-5785)
scaffold0772 (54-86)||(5846-5878)
[»] scaffold0025 (3 HSPs)
scaffold0025 (54-252)||(8988-9192)
scaffold0025 (54-154)||(146838-146938)
scaffold0025 (96-252)||(148860-149018)
[»] scaffold0132 (2 HSPs)
scaffold0132 (128-252)||(13645-13769)
scaffold0132 (6-86)||(42677-42754)
[»] scaffold1542 (1 HSPs)
scaffold1542 (128-230)||(534-636)
[»] scaffold0049 (2 HSPs)
scaffold0049 (135-252)||(48326-48443)
scaffold0049 (6-85)||(20493-20572)
[»] scaffold0125 (1 HSPs)
scaffold0125 (128-252)||(41787-41911)
[»] scaffold0034 (1 HSPs)
scaffold0034 (6-86)||(80187-80267)
[»] scaffold0026 (3 HSPs)
scaffold0026 (135-247)||(107891-108003)
scaffold0026 (143-185)||(89863-89905)
scaffold0026 (144-252)||(64527-64640)
[»] scaffold0016 (3 HSPs)
scaffold0016 (6-87)||(166116-166197)
scaffold0016 (12-87)||(162036-162111)
scaffold0016 (13-70)||(116410-116467)
[»] scaffold0184 (1 HSPs)
scaffold0184 (6-86)||(31132-31212)
[»] scaffold0075 (1 HSPs)
scaffold0075 (128-224)||(34460-34556)
[»] scaffold0686 (2 HSPs)
scaffold0686 (12-86)||(5735-5809)
scaffold0686 (12-86)||(5941-6015)
[»] scaffold0116 (2 HSPs)
scaffold0116 (144-250)||(177-283)
scaffold0116 (6-86)||(30417-30497)
[»] scaffold0420 (1 HSPs)
scaffold0420 (140-252)||(13325-13437)
[»] scaffold0215 (2 HSPs)
scaffold0215 (162-252)||(9371-9461)
scaffold0215 (162-252)||(16269-16359)
[»] scaffold0529 (1 HSPs)
scaffold0529 (139-252)||(3102-3215)
[»] scaffold0342 (1 HSPs)
scaffold0342 (6-87)||(304-385)
[»] scaffold0076 (1 HSPs)
scaffold0076 (163-252)||(43137-43226)
[»] scaffold1711 (1 HSPs)
scaffold1711 (140-252)||(1304-1416)
[»] scaffold1164 (1 HSPs)
scaffold1164 (6-85)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (6-85)||(19802-19881)
scaffold0122 (6-85)||(24106-24185)
[»] scaffold0139 (2 HSPs)
scaffold0139 (162-252)||(14083-14173)
scaffold0139 (139-252)||(21115-21228)
[»] scaffold0022 (2 HSPs)
scaffold0022 (178-252)||(5254-5328)
scaffold0022 (145-185)||(102923-102963)
[»] scaffold0361 (1 HSPs)
scaffold0361 (128-211)||(3370-3453)
[»] scaffold0876 (1 HSPs)
scaffold0876 (15-85)||(94-164)
[»] scaffold0310 (1 HSPs)
scaffold0310 (11-85)||(6261-6335)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-70)||(35816-35873)
[»] scaffold1295 (1 HSPs)
scaffold1295 (13-70)||(442-499)
[»] scaffold0507 (1 HSPs)
scaffold0507 (13-70)||(1363-1420)
[»] scaffold0456 (2 HSPs)
scaffold0456 (144-185)||(1546-1587)
scaffold0456 (144-185)||(8691-8732)
[»] scaffold0369 (1 HSPs)
scaffold0369 (178-250)||(3863-3936)
[»] scaffold0123 (1 HSPs)
scaffold0123 (144-185)||(8216-8257)
[»] scaffold0058 (2 HSPs)
scaffold0058 (144-185)||(70307-70348)
scaffold0058 (54-86)||(57392-57424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-70)||(76699-76756)
[»] scaffold0084 (1 HSPs)
scaffold0084 (135-207)||(56106-56178)
[»] scaffold0409 (2 HSPs)
scaffold0409 (144-182)||(1348-1386)
scaffold0409 (144-182)||(9603-9641)
[»] scaffold1272 (1 HSPs)
scaffold1272 (13-70)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (13-70)||(6999-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (144-185)||(22422-22463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (13-70)||(43651-43708)
[»] scaffold0032 (3 HSPs)
scaffold0032 (144-185)||(93773-93814)
scaffold0032 (54-86)||(55904-55936)
scaffold0032 (54-86)||(108075-108107)
[»] scaffold0010 (1 HSPs)
scaffold0010 (13-70)||(31357-31414)
[»] scaffold0004 (1 HSPs)
scaffold0004 (53-86)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (54-86)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (54-86)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (54-86)||(9882-9914)
[»] scaffold0389 (1 HSPs)
scaffold0389 (145-185)||(10868-10908)
[»] scaffold0251 (1 HSPs)
scaffold0251 (54-86)||(13285-13317)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 252
Target Start/End: Original strand, 16743991 - 16744239
Alignment:
Q  4 ggagaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattt 103  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  16743991 ggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaacgaggttagtctttaccataatcatcatcattttgtaaattt 16744090  T
Q  104 tcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatga 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16744091 tcaaatgttgtatgaattttgattatggatgattgttgttaaattcgtgctccaactttgatgatatgtttgtatccatgaattgataataagtgtatga 16744190  T
Q  204 ttgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||||| ||| ||| |||||||||||| |||||| ||||||||||    
T  16744191 ttgttggttaaattacatttttaaatatgtaaaaatgaaaagttatgaa 16744239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 13839232 - 13839033
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13839232 taaggtaagggggttagtcttcatcataatcatcatcattttgtgaaattttcaaatgttgtatgaattttgattatgaataattgttgctaaattcgtg 13839133  T
Q  153 ctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||| | ||| |||||| ||||| | | |||||| ||||| ||||    
T  13839132 ctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagttgtgaa 13839033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 12030073 - 12030271
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  12030073 taaggtaagggggttaatcattatcataatcatcatcattttgtgaaatttcaaatgttgtatgacttttgcttatggataattgttgctaaattcgtgc 12030172  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||||||||| || ||| ||||| ||||    
T  12030173 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaagtgataagttgtgaa 12030271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 14842487 - 14842685
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||  |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14842487 taaggtaagggggttagtctttatcataatcatcttcactttgcaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 14842586  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||  |||| ||||||||||||||| | ||| |||||| |||| |||| |||||| ||||||||||    
T  14842587 tccaactgtgatgatatgtttgtatgcatgaattgaagataattgtatgattgttggtgaaattgcatgttcaaatgtgtaaaaatgataagttatgaa 14842685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 54 - 234
Target Start/End: Complemental strand, 2050147 - 2049967
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  2050147 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatcaattttgcttatggataattgttgctaaattcgtgc 2050048  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    ||||||| ||| ||||||||||||||| ||||||||| |||| |||| |||||||||| | ||| |||||| |||||||||    
T  2050047 tccaactgtgacgatatgtttgtatgcctgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgta 2049967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 19232169 - 19231982
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtg-aatttt 104  Q
    |||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  19232169 agaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcttaatcatcatcattttgtgaaatttt 19232070  T
Q  105 caaatgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 190  Q
    |||||||||||||||||||   || |||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  19232069 caaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaactgtgatgatatgtttatattcatgaattgat 19231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 2449238 - 2449362
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  2449238 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 2449337  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  2449338 atatgtgaaaatgaaaagttatgaa 2449362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 51158008 - 51158142
Alignment:
Q  118 aattttgattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagatt 217  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||    
T  51158008 aattttgcttatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatt 51158107  T
Q  218 ccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||||||| |||||| ||||| ||||    
T  51158108 acatgttcaaatatgtaaaaatgataagttgtgaa 51158142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 17912483 - 17912606
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||||||    
T  17912483 atggataattgttgctaaattcgtgctccaactt-gatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtttaa 17912581  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||| |||||| ||||||||||    
T  17912582 atatgtaaaaatgaaaagttatgaa 17912606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 19260749 - 19260869
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  19260749 taaggtaagggggttagtctttatcataatcatcatcattttgtaagttttcaaatgttgtatgaattttttttatggataattgttgctaaattcgtgc 19260848  T
Q  154 tccaactttgatgatatgttt 174  Q
    || || | |||||||||||||    
T  19260849 tctaattatgatgatatgttt 19260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 15858996 - 15859148
Alignment:
Q  102 tttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgt 199  Q
    |||||| |||||||||||||||   || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||    
T  15858996 tttcaattgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgt 15859095  T
Q  200 atgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||||||| | ||| |||||| ||||||| | |||||| ||||| ||||    
T  15859096 atgattgttggtgaaattacatgttcaaatatgaacaaatgataagttgtgaa 15859148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 13975722 - 13975845
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || | |||||||||||||||   ||| |||||||||    
T  13975722 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaa 13975820  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||| ||| |||||| ||||||||||    
T  13975821 ataagtaaaaatgataagttatgaa 13975845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 45861068 - 45860945
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || | |||||||||||||||   ||| |||||||||    
T  45861068 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaa 45860970  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||| ||| |||||| ||||||||||    
T  45860969 ataagtaaaaatgataagttatgaa 45860945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 15936634 - 15936751
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| |||| ||||    
T  15936634 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 15936733  T
Q  235 gaaatgagaagttatgaa 252  Q
     |||||| ||||| ||||    
T  15936734 aaaatgataagttgtgaa 15936751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 13954890 - 13955013
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || | |||||||||||||||   ||| |||||||||    
T  13954890 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaa 13954988  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||| ||| ||||||  |||||||||    
T  13954989 ataagtaaaaatgatcagttatgaa 13955013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 15857120 - 15857198
Alignment:
Q  11 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcat 89  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||    
T  15857120 cataggagctaaagtgaagctagagctaatacttggagataattaaggtaagggggttagtcttcatcataatcatcat 15857198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3992953 - 3992873
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  3992953 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 3992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 55513273 - 55513193
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  55513273 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 55513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 2844594 - 2844514
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||    
T  2844594 agaatcataggagcaaaagtgaagctagagctaatagtttgagataattaaggtaagggggttagtttttatcataatcat 2844514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 15938476 - 15938593
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    |||||| |||||| |||||||||||| | ||||||||||||||  ||||||||||| |||| ||||||||||||||| | ||| |||||| |||| ||||    
T  15938476 attgttactaaatacgtgctccaactgtaatgatatgtttgtaatcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 15938575  T
Q  235 gaaatgagaagttatgaa 252  Q
     |||||| ||||| ||||    
T  15938576 aaaatgataagttgtgaa 15938593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 54037976 - 54038056
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| |||| |||||||||    
T  54037976 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcat 54038056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 17955832 - 17955916
Alignment:
Q  6 agaagcataggagctaaagtgaagctag----agctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  17955832 agaatcataggagcaaaagtgaagctaggtagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 17955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 7854385 - 7854305
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || | |||||||||    
T  7854385 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcataatcat 7854305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 55316471 - 55316359
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  55316471 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 55316372  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  55316371 gataagttatgaa 55316359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 16821369 - 16821291
Alignment:
Q  162 tgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatg 240  Q
    ||||| ||||||||||||||| ||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||    
T  16821369 tgatgttatgtttgtatgcataaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatg 16821291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 45582016 - 45581954
Alignment:
Q  25 tgaagctagagctagtagttggagataattaaggtaag-ggggttagtctttaccataatcat 86  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  45582016 tgaagctagagctaatagttggagataattaaggtaaggggggttagtttttatcataatcat 45581954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 252
Target Start/End: Complemental strand, 15615170 - 15614973
Alignment:
Q  53 ttaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgt 151  Q
    |||||||||||||||||||||||| |||||||||  | ||||||   ||||||  ||||||||||||  | | || ||| |  |||  ||||| ||| ||    
T  15615170 ttaaggtaagggggttagtctttatcataatcatg-taattttgc--attttctcatgttgtatgaaaatgggttgatgaacaattcatgctagatttgt 15615074  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||  ||| || || ||| ||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||||||||| |||||| ||||| |||    
T  15615073 gctcttactgtggtgttatatttgtatgcatgaattgatgataattgtaggattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtga 15614974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 41270327 - 41270215
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  |||||||||||||||   ||| |||||| | ||||| | ||||    
T  41270327 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtggaattacatgttcatatatgcaaaaat 41270228  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  41270227 gataagttatgaa 41270215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 14080756 - 14080715
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  14080756 aaattcgtgctccaactatgatgatatgtttgtatgcatgaa 14080715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17205076 - 17205019
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  17205076 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 17205019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12031904 - 12031849
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtt 68  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||    
T  12031904 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggtt 12031849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 54651796 - 54651642
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||| ||||| | |||||||||  ||| ||| || | ||||  ||||||||||||  | | || ||| || ||||||||||||||||||    
T  54651796 taaggtaagggggtttgtcttcatcataatcatgttcaatttttgcaatttctcatgttgtatgaaaatgggttgatgaataattgttgctaaattcgtg 54651697  T
Q  153 ctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgt 207  Q
    |||   || ||||| ||| ||  | ||||||||||||| |||| |||||||||||    
T  54651696 ctcttgctgtgatgctattttcttgtgcatgaattgatgataattgtatgattgt 54651642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17191936 - 17191879
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  17191936 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 17191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 38810868 - 38810925
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| ||||| |||||||||||||||||    
T  38810868 taggagctaaagtgaagcttgggctaggaattggtgataactaaggtaagggggttag 38810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 13954804 - 13954836
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  13954804 taaggtaagggggttagtctttaccataatcat 13954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 45861154 - 45861122
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  45861154 taaggtaagggggttagtctttaccataatcat 45861122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 3576290 - 3576347
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||| | || | |||||||||||||||||||||||    
T  3576290 taggaggtaaagtgaagcttgggctaggaatttgtgataattaaggtaagggggttag 3576347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 13301323 - 13301380
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  13301323 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 13301380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 13311979 - 13312036
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  13311979 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 13312036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 2449152 - 2449184
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  2449152 taaggtaagggggttagtctttatcataatcat 2449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 11986173 - 11986245
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgt 207  Q
    ||||||| ||||||||||||| |||| ||||| ||| || || ||||||| || || |||| |||||||||||    
T  11986173 attgttgttaaattcgtgctctaactgtgatgttattttcgtgtgcatgatttaatgataattgtatgattgt 11986245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16261809 - 16261777
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  16261809 taaggtaagggggttagtctttatcataatcat 16261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16933869 - 16933901
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  16933869 taaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17912398 - 17912430
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  17912398 taaggtaagggggttagtctttatcataatcat 17912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23492728 - 23492696
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  23492728 taaggtaagggggttagtctttatcataatcat 23492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 38168269 - 38168237
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  38168269 taaggtaagggggttagtctttatcataatcat 38168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 53771397 - 53771365
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  53771397 taaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 252
Target Start/End: Complemental strand, 41394609 - 41394361
Alignment:
Q  4 ggagaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattt 103  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  41394609 ggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattt 41394510  T
Q  104 tcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||    
T  41394509 tcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcataaattgatgataattgtatga 41394410  T
Q  204 ttgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||| |  || |||||| ||||||||| |||||| ||||| ||||    
T  41394409 ttgttggtgaagttacatgttcaaatatgtaaaaatgataagttgtgaa 41394361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 20913367 - 20913169
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| | |||||||| ||||||||  ||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||    
T  20913367 taaggtaagggggttagtctttatcgtaatcatcctcattttgcaaattttcaattgttgtatgaattttgcttacggataattgttgctaaattcgtgc 20913268  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| | ||||||| |||||| ||||||||||    
T  20913267 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcatatatgtaaaaatgataagttatgaa 20913169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 20931682 - 20931484
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||  ||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||    
T  20931682 taaggtaagggggttagcctttatcataatcatcctcattttgcaaattttcaattgttgtatgaagtttgcttatggataattgttgctaaattcgtgc 20931583  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| | ||||||| |||||| ||||||||||    
T  20931582 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcatatatgtaaaaatgataagttatgaa 20931484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 37844374 - 37844546
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  37844374 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcat 37844473  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtt 224  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| ||||||    
T  37844474 gctccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 37844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 20446019 - 20445846
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||   || |||||| ||||||||||||||||    
T  20446019 taaggtaagggagttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 20445920  T
Q  151 tgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtt 224  Q
    |||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| ||||||    
T  20445919 tgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 20445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 20893551 - 20893750
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  20893551 taaggtaagggggttagtcttcatcataatcatcatcattttgt-aattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattctt 20893649  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| | | ||| |||||| ||||| | | |||||| ||||| |||    
T  20893650 gctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttgttgaaattacatgttcaaataggaacaaatgataagttgtga 20893749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 20531783 - 20531611
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  20531783 taaggtaaggaaattagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 20531684  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtt 224  Q
    ||||||| | |||| |||||||||||||||||||||||| |||| ||||||||||||||| | ||| ||||||    
T  20531683 gctccaaatgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 20531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 51452755 - 51452631
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  51452755 atggataattgttgctaaattcgtgcttcaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 51452656  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  51452655 atatgtgaaaatgaaaagttatgaa 51452631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 21860414 - 21860334
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  21860414 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 21860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 44034829 - 44034903
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  44034829 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 44034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 2116506 - 2116394
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||| |||||||||   ||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| ||||    
T  2116506 tgctagattcgtgcttttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 2116407  T
Q  240 gagaagttatgaa 252  Q
    || ||||| ||||    
T  2116406 gataagttgtgaa 2116394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 252
Target Start/End: Complemental strand, 45051759 - 45051562
Alignment:
Q  53 ttaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgt 151  Q
    |||||||||||||||||||||||| |||||||||  | ||||||   ||||||  ||||||||||||  | | || ||| |  |||  ||||| ||||||    
T  45051759 ttaaggtaagggggttagtctttatcataatcatg-tgattttgc--attttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgt 45051663  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    | ||  ||| ||||| || |||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||| |||    
T  45051662 gttcttactgtgatgttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtga 45051563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 41218808 - 41218743
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagt 71  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  41218808 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagt 41218743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 27675191 - 27675120
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatc 84  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||  |||| |||||||    
T  27675191 taggagctaaagtgaagcttgggctaggaattggagataattaaggtaagggggttagaatttatcataatc 27675120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 252
Target Start/End: Complemental strand, 22228146 - 22227948
Alignment:
Q  55 aaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||  ||| |||||||||   || ||| || ||||||  ||||||||||||  | | || ||| |  ||| |||||||||||||||    
T  22228146 aaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 22228047  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||   || ||||| ||| ||  | ||||||||||||| |||| |||||||||||| || | ||| |||||| ||||||||| |||||| ||||||||||    
T  22228046 tcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgataagttatgaa 22227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 252
Target Start/End: Complemental strand, 22232843 - 22232645
Alignment:
Q  55 aaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||  ||| |||||||||   || ||| || ||||||  ||||||||||||  | | || ||| |  ||| |||||||||||||||    
T  22232843 aaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 22232744  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||   || ||||| ||| ||  | ||||||||||||| |||| |||||||||||| || | ||| |||||| ||||||||| |||||| ||||||||||    
T  22232743 tcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgataagttatgaa 22232645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 5072388 - 5072500
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| ||||||| |||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  5072388 tgctaaattcgtgctcttgctgtgatgttatgtttatatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 5072487  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  5072488 gataagttatgaa 5072500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 18601118 - 18601230
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    |||||||||| |||||   || ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  18601118 tgctaaattcatgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 18601217  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  18601218 gataagttatgaa 18601230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 13376711 - 13376768
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  13376711 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 13376768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 20177570 - 20177513
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||| ||||||||    
T  20177570 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaatggggttag 20177513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 22143361 - 22143402
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  22143361 aaattcgtgctctaactatgatgatgtgtttgtatgcatgaa 22143402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 6 - 241
Target Start/End: Original strand, 20627190 - 20627426
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaa-tttt 104  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||    
T  20627190 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaacggggttagtctttatcataatcatcatcattttgtaaaatttt 20627289  T
Q  105 caaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgat 204  Q
    ||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||    
T  20627290 caaatattgtatgaattatgattatggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcacgaattgatgataattgtatgat 20627389  T
Q  205 tgttggttagattccatgtttaaatatgtagaaatga 241  Q
    ||||||| | ||| |||||  ||||||||| ||||||    
T  20627390 tgttggtgaaattacatgtccaaatatgtaaaaatga 20627426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 43642833 - 43643059
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttc 105  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  43642833 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaagggaaggaggttagtctttatcataatcatcatcattttgtgaattttc 43642932  T
Q  106 aaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatga 203  Q
    ||||||||||||||||||   ||  ||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| |||| |||||||    
T  43642933 aaatgttgtatgaatttttgcatagtggataattgttgctaaatttgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatga 43643032  T
Q  204 ttgttggttagattccatgtttaaata 230  Q
    |||||||| | ||| |||||| |||||    
T  43643033 ttgttggtgaaattacatgttcaaata 43643059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 463075 - 462877
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  463075 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 462976  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||| ||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  462975 tccaactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 462877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 19794581 - 19794828
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttc 105  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||| |    
T  19794581 agaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgtaaattt-c 19794679  T
Q  106 aaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatga 203  Q
    ||||||||||||||||||   || |||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  19794680 aaatgttgtatgaatttttgcataatggataattgtcgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgataataattgtatga 19794779  T
Q  204 ttgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||| | ||| |||||| ||||| | | |||||| ||||| ||||    
T  19794780 ttgttggtgaaattacatgttcaaataggaacaaatgataagttgtgaa 19794828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 36982364 - 36982565
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||   || |||||| ||||||||||||||||    
T  36982364 taaggtaagggggttagtctttatcataatcatcatcatttttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 36982463  T
Q  151 tgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatg 250  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||| |||| ||||| |||| | ||| |||||| ||||||||| |||||| ||||| ||    
T  36982464 tgctccaactgtgatgatatgtttgtattcatgaattgatgataattgtaagattgctggtgaaattacatgttcaaatatgtaaaaatgataagttgtg 36982563  T
Q  251 aa 252  Q
    ||    
T  36982564 aa 36982565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 8891581 - 8891381
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  8891581 taaggtaaaggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 8891482  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||  | ||| |||||| ||||| | | |||||| ||||| |||    
T  8891481 gctccaactgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggcgaaattacatgttcaaataggaacaaatgataagttgtga 8891382  T
Q  252 a 252  Q
    |    
T  8891381 a 8891381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 19689401 - 19689525
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  19689401 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 19689500  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  19689501 atatgtgaaaatgaaaagttatgaa 19689525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 23820334 - 23820210
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  23820334 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 23820235  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  23820234 atatgtgaaaatgaaaagttatgaa 23820210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 14906440 - 14906564
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  14906440 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 14906539  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  14906540 atatgtgaaaatgaaaagttatgaa 14906564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 20015274 - 20015150
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||| ||||||| |    
T  20015274 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgcatgcatgaattgataataattgtgtgattgttggttaaattacatgtttga 20015175  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  20015174 atatgtgaaaatgaaaagttatgaa 20015150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 24341309 - 24341513
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| | |||||||||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  24341309 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 24341408  T
Q  148 tcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagtt 247  Q
    || |||| ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||  ||||| || |||||| ||||| ||||||    
T  24341409 tcatgcttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattatatgttcaattatgtaaaaatgtgaagtt 24341508  T
Q  248 atgaa 252  Q
     ||||    
T  24341509 gtgaa 24341513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 17396653 - 17396776
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || | ||||||||||||||| | ||| |||||||||    
T  17396653 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtgaaattacatgtttaa 17396751  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||| ||| |||||| ||||||||||    
T  17396752 ataagtaaaaatgataagttatgaa 17396776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 25265390 - 25265514
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||    
T  25265390 atggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 25265489  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||| ||||    
T  25265490 ttatgtaaaaatgtgaagttgtgaa 25265514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 22863267 - 22863169
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcg 150  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||   || |||||| ||||||||||||||||    
T  22863267 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaattgttgtatgaatttttgcataatggataattgttgctaaattcg 22863169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 22275125 - 22275045
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22275125 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagcctttatcataatcat 22275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 22284358 - 22284278
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  22284358 agaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 22284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 15633617 - 15633538
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    |||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||    
T  15633617 agaatcataggagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtctttatcataatca 15633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 7507894 - 7507968
Alignment:
Q  178 tgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||| | ||||||||||    
T  7507894 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaataataagttatgaa 7507968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 43646289 - 43646232
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  43646289 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 43646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 19886661 - 19886773
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | || |    
T  19886661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 19886760  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  19886761 gataagttatgaa 19886773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17396567 - 17396599
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  17396567 taaggtaagggggttagtctttaccataatcat 17396599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 19660273 - 19660221
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggg 65  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||||||||    
T  19660273 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggg 19660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 19689314 - 19689347
Alignment:
Q  53 ttaaggtaagggggttagtctttaccataatcat 86  Q
    |||||||||||||||||||||||| |||||||||    
T  19689314 ttaaggtaagggggttagtctttatcataatcat 19689347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 25305826 - 25305769
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||  | |||| |||||||||||||||||||||||    
T  25305826 taggagttaaagtgaagcttgggctatgaattggtgataattaaggtaagggggttag 25305769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9652796 - 9652828
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  9652796 taaggtaagggggttagtctttatcataatcat 9652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 14906354 - 14906386
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  14906354 taaggtaagggggttagtctttatcataatcat 14906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23820420 - 23820388
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  23820420 taaggtaagggggttagtctttatcataatcat 23820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 54118120 - 54118346
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttc 105  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  54118120 agaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgtgaattttc 54118219  T
Q  106 aaatgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatga 203  Q
    ||||||||||||||||||   || |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||    
T  54118220 aaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatga 54118319  T
Q  204 ttgttggttagattccatgtttaaata 230  Q
    |||||||| | ||| |||||| |||||    
T  54118320 ttgttggtgaaattacatgttcaaata 54118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 122226 - 122028
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  122226 taaggtaaggggattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaatttgtgc 122127  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  122126 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 122028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 13246769 - 13246569
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||| |||||||||    
T  13246769 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgttaaattcgt 13246670  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||| ||||| |||||||||||||||||||||||||| || |||| ||||||||||||||| | ||| |||||| ||||| | | |||||| ||||| |||    
T  13246669 gctacaactgtgatgatatgtttgtatgcatgaattaatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtga 13246570  T
Q  252 a 252  Q
    |    
T  13246569 a 13246569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 26680463 - 26680339
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  26680463 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 26680364  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||| |||||| ||||||||||    
T  26680363 atatgtaaaaatgaaaagttatgaa 26680339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 10488825 - 10488701
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  10488825 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 10488726  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  10488725 atatgtgaaaatgaaaagttatgaa 10488701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 15675009 - 15675213
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| | |||||||||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  15675009 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 15675108  T
Q  148 tcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| || |||||| ||||| ||||||    
T  15675109 tcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagtt 15675208  T
Q  248 atgaa 252  Q
     ||||    
T  15675209 gtgaa 15675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 16327926 - 16328050
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  16327926 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 16328025  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  16328026 atatgtgaaaatgaaaagttatgaa 16328050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 10104170 - 10104374
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| | |||||||||||||||    |||   | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  10104170 taaggtaagggggttagtcttcatcataatcatcatcatcatttttacaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 10104269  T
Q  148 tcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagtt 247  Q
     |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| || |||||| ||||| ||||||    
T  10104270 ccgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagtt 10104369  T
Q  248 atgaa 252  Q
     ||||    
T  10104370 gtgaa 10104374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 33241043 - 33240901
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| | |||||||||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  33241043 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 33240944  T
Q  148 tcgtgctccaactttgatgatatgtttgtatgcatgaattgat 190  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  33240943 tcgtgctccaactgtgatgatatgtttgtatgcatgaattgat 33240901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 13048221 - 13048345
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||| || | ||||||||||||||| | ||| |||||||||    
T  13048221 atggataattgttgctaaattcatgctccaacttcaatgatatgtttgtatgcatgatttgatgatgattgtatgattgttggtgaaattacatgtttaa 13048320  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||| || ||||||||||    
T  13048321 atatgtaaaaaggataagttatgaa 13048345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 25119059 - 25119139
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||    
T  25119059 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggagttagtttttatcataatcat 25119139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 31115865 - 31115768
Alignment:
Q  155 ccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| ||||||  | |||||| ||||| |||||| ||||    
T  31115865 ccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttccattatgtaaaaatgtgaagttgtgaa 31115768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 10644467 - 10644360
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgaga 243  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| |||| |||||||||||| || | ||| |||||| ||||||||| |||||  |    
T  10644467 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgtta 10644368  T
Q  244 agttatga 251  Q
    ||||||||    
T  10644367 agttatga 10644360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 5682380 - 5682460
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||| |||| |||||||||    
T  5682380 agaatcataggagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagtgggttagtttttatcataatcat 5682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 31132657 - 31132545
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| | |||||| ||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  31132657 taaggtaagggggttagtcttcatcataattatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 31132558  T
Q  148 tcgtgctccaact 160  Q
    |||||||||||||    
T  31132557 tcgtgctccaact 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 40885570 - 40885679
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaa-tatgtagaaatgag 242  Q
    |||||||| |||||||| || || ||||||||||||||||||||| | |||| || ||| |||||||| | ||| |||||| ||| |||||| |||||      
T  40885570 aaattcgtactccaactgtggtgctatgtttgtatgcatgaattggtgataattgaatgtttgttggtgaaattacatgttcaaagtatgtataaatgtc 40885669  T
Q  243 aagttatgaa 252  Q
    ||||||||||    
T  40885670 aagttatgaa 40885679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 47357906 - 47357794
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||| ||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  47357906 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatggattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 47357807  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  47357806 gataagttatgaa 47357794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 41165808 - 41165865
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||| |||||||||||||    
T  41165808 taggagctaaagtgaagcttgggctaggaattggtgataattaacgtaagggggttag 41165865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 47534933 - 47534990
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | || || | |||| |||||||||||||||||||||||    
T  47534933 taggagctaaagtgaagcttgggcgaggaattggtgataattaaggtaagggggttag 47534990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 7850346 - 7850314
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  7850346 taaggtaagggggttagtcttcaccataatcat 7850314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 13809511 - 13809551
Alignment:
Q  145 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  13809511 aattcgtgctccaattatgatgatatgtttgaatgcatgaa 13809551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 14952117 - 14952085
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  14952117 taaggtaagggggttagtctttatcataatcat 14952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15135907 - 15135939
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  15135907 taaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15272211 - 15272243
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  15272211 taaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16327840 - 16327872
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  16327840 taaggtaagggggttagtctttatcataatcat 16327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16609013 - 16609045
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  16609013 taaggtaagggggttagtctttatcataatcat 16609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 26680549 - 26680517
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  26680549 taaggtaagggggttagtctttatcataatcat 26680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 1462 - 1263
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  1462 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtatgaatttttcttatggataattgttgctaaattcgtg 1363  T
Q  153 ctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  1362 ctccaactttgatgatatgttagtatgcatgaattgataataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 1263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 3508 - 3706
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||  |||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  3508 taaggtaagggggttagtctttgtcataatcatcttcattttgtaaattttcaaaagttgtatgaattttgattatagataattgttgctaaattcgtgc 3607  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  3608 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 3706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 241
Target Start/End: Complemental strand, 3060344 - 3060116
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgtt 112  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  3060344 taggagcaaaagtgaagctagagctaatagttggagataatgaaggtaagggggtaagtctttatcataatcatcatcattttgtaaattttcaaatgtt 3060245  T
Q  113 gtatgaattttgattatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggtt 212  Q
     ||||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||| |||| ||||  | |||||||     
T  3060244 atatgaattttgcttatggataattgttgctaaattcgtgctccaactgtgataatatatttgtatgcattaattgatgataattgtaatactgttggtg 3060145  T
Q  213 agattccatgtttaaatatgtagaaatga 241  Q
    | ||| |||||| ||||||||| ||||||    
T  3060144 aaattacatgttcaaatatgtaaaaatga 3060116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 16212103 - 16211905
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  16212103 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaattttgcttatggacaattgttgctaaattcgtgc 16212004  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| ||||||| || | ||| |||||| ||||||||| |||||| ||||| ||||    
T  16212003 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgtttgtgaaattgcatgttcaaatatgtaaaaatgataagttgtgaa 16211905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 13036938 - 13037138
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  13036938 taaggtaagggggttagtcttcaccataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 13037037  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| | | ||| |||||| ||||| | | |||||| ||||| |||    
T  13037038 gctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttgatgaaattgcatgttcaaataggaacaaatgataagttgtga 13037137  T
Q  252 a 252  Q
    |    
T  13037138 a 13037138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 36053003 - 36052803
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   || |||||| ||||||||||||||  |    
T  36053003 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgtataatggataattgttgctaaatttat 36052904  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
     |||||||| |||||||| |||||||||||||||||||| |||| | ||||||||||||| | ||| |||||| ||||||||| |||||| ||||| |||    
T  36052903 actccaactgtgatgatacgtttgtatgcatgaattgatgataattatatgattgttggtaaaattacatgttcaaatatgtaaaaatgataagttgtga 36052804  T
Q  252 a 252  Q
    |    
T  36052803 a 36052803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 11580661 - 11580863
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg---attatggatgattgttgctaaattc 149  Q
    |||||||||||| |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    || |||||| ||| |||||||||||    
T  11580661 taaggtaaggggattagtctttatcataatcatcatcatttttgtaaattttcaaatgttgtatgaattttttgcataatggataattattgctaaattc 11580760  T
Q  150 gtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttat 249  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||| | | |||||| ||||| |    
T  11580761 gtgctccaactgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgt 11580860  T
Q  250 gaa 252  Q
    |||    
T  11580861 gaa 11580863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 11516490 - 11516366
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  11516490 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 11516391  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  11516390 atatgtgaaaatgaaaagttatgaa 11516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 15441564 - 15441688
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  15441564 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 15441663  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  15441664 atatgtgaaaatgaaaagttatgaa 15441688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 30262129 - 30262253
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  30262129 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 30262228  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  30262229 atatgtgaaaatgaaaagttatgaa 30262253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 7293279 - 7293155
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||    
T  7293279 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattaataataattgtatgattgttggttaaattacatgtttaa 7293180  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  7293179 atatgtgaaaatgaaaagttatgaa 7293155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 25292338 - 25292462
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||| | || | ||||||||||||||| | ||| |||||||||    
T  25292338 atggataattgttgctaaatttgtgctccaactttgatgatatgtttgtatgtatgaattgttgatgattgtatgattgttggtgaaattacatgtttaa 25292437  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||| || ||| ||||||    
T  25292438 atatgtaaaaaggataagctatgaa 25292462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 47481031 - 47481155
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| |||||||||||| || | ||| |||||| ||    
T  47481031 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaa 47481130  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||| |||||| ||||| ||||    
T  47481131 atatgtaaaaatgataagttgtgaa 47481155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 18253842 - 18253959
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| |||| ||||    
T  18253842 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 18253941  T
Q  235 gaaatgagaagttatgaa 252  Q
     |||||| ||||| ||||    
T  18253942 aaaatgataagttgtgaa 18253959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 13321278 - 13321153
Alignment:
Q  129 tggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgttt--a 226  Q
    ||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||||  |    
T  13321278 tggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtttcaa 13321179  T
Q  227 aatatgtagaaatgagaagttatgaa 252  Q
    | |||||| |||||  ||||||||||    
T  13321178 agtatgtataaatgtcaagttatgaa 13321153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 32493898 - 32493978
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  32493898 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 32493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 126818 - 126738
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  126818 agaatcataggagcaaaaatgaagttagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 13572924 - 13572816
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgaga 243  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || | ||| ||||||||||| | ||| |||||||||||||||| |||||| |    
T  13572924 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtgtgattgttggtgaaattacatgtttaaatatgtaaaaatgata 13572825  T
Q  244 agttatgaa 252  Q
    |||||||||    
T  13572824 agttatgaa 13572816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 295893 - 296087
Alignment:
Q  56 aggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaa-ttttg-attatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||| ||||| | ||||||  |||||||||| || |||||||||  ||||||||| ||||| || ||| || ||||||||||||||||||     
T  295893 aggtaagggggtttgtcttcaacataattctcatcatttt-tgcattttcaaactttgtatgaaattttgcataatgaataattgttgctaaattcgtgt 295991  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttat 249  Q
    || || |  | || ||||||||| ||||||||| ||| ||||   ||||||||||||| | ||| |||||| || |||||| ||||||||||||||    
T  295992 tctaattgaggtgttatgtttgtgtgcatgaatcgatgataatgttatgattgttggtgaaatttcatgttgaattatgtaaaaatgagaagttat 296087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 16478968 - 16479074
Alignment:
Q  146 attcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaag 245  Q
    ||||||||||  |||  |||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| |||    
T  16478968 attcgtgctcttactgcgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataag 16479067  T
Q  246 ttatgaa 252  Q
    || ||||    
T  16479068 ttgtgaa 16479074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 1936869 - 1936949
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||| ||| ||||||||||||||| || |||||||||||||||||||||||| ||||||| |||| |||||||||    
T  1936869 agaatcatagaagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtttttatcataatcat 1936949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 111121 - 111201
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| || | |||||||||    
T  111121 agaatcataggagcaaaagtgaagcttgagctaaaagttggtgataattaaggtaagggggttagttttcatcataatcat 111201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 10989661 - 10989549
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  10989661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 10989562  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  10989561 gataagttatgaa 10989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 13911024 - 13911136
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||    | ||||| |||||||||||||||||||||||  ||| ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  13911024 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttaattgtatgattgttggtgaaattacatgttcatatatgcaaaaat 13911123  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  13911124 gataagttatgaa 13911136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 2437710 - 2437597
Alignment:
Q  139 ttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaa 238  Q
    |||||||||||||||||    | ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | |||    
T  2437710 ttgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaa 2437611  T
Q  239 tgagaagttatgaa 252  Q
    ||| ||||||||||    
T  2437610 tgataagttatgaa 2437597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 7283908 - 7283987
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    |||| ||||||||| ||||||||||| ||| || || |||| |||||||||||||||||||||||| || | ||||||||    
T  7283908 agaatcataggagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttagttttcatcataatca 7283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 14113989 - 14114031
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatat 170  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14113989 atggataattgttgctaaattcgtgctccaactttgatgatat 14114031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 14423639 - 14423681
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatat 170  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14423639 atggataattgttgctaaattcgtgctccaactttgatgatat 14423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 13377924 - 13377867
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  13377924 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13377867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 13389750 - 13389693
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  13389750 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 16919926 - 16919870
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtta 69  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| |||||||||||    
T  16919926 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggtta 16919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2029276 - 2029244
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  2029276 taaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 7293365 - 7293333
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  7293365 taaggtaagggggttagtctttatcataatcat 7293333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 11516576 - 11516544
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  11516576 taaggtaagggggttagtctttatcataatcat 11516544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 14113903 - 14113935
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  14113903 taaggtaagggggttagtctttatcataatcat 14113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15441478 - 15441510
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  15441478 taaggtaagggggttagtctttatcataatcat 15441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 30262043 - 30262075
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  30262043 taaggtaagggggttagtctttatcataatcat 30262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 42056188 - 42056220
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  42056188 taaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 5e-71; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 16404852 - 16405077
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttc 105  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||| || |||||||    
T  16404852 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattt-gtaaattttc 16404950  T
Q  106 aaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatga 203  Q
    ||||||||||||||||||   || |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  16404951 aaatgttgtatgaatttttgcatgatggataattattgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatga 16405050  T
Q  204 ttgttggttagattccatgtttaaata 230  Q
    |||||||| | ||| |||||| |||||    
T  16405051 ttgttggtgaaattacatgttcaaata 16405077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 16193643 - 16193840
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||| |||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  16193643 taaggtaagggg-ttagtctttatcataatcatcatcatttggtaaattttcaaatattgtatgaattttgcttatggatgattgttgctaaattcgtgc 16193741  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||  | ||| |||||| ||||||||| |||||| ||||| ||||    
T  16193742 tccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggggaaattacatgttcaaatatgtaaaaatgataagttgtgaa 16193840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 24928716 - 24928915
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 152  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24928716 taaggtaatggggttagtctttatcataatcatcgtcattttgtgaaattttcaaatgttgtatgaattttgattatggataattgttgctaaattcgtg 24928815  T
Q  153 ctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||| | | |||||| ||||| ||||    
T  24928816 ctccaactgtgattatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtgaa 24928915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 43373392 - 43373592
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   || |||||| |||  ||||||||||||    
T  43373392 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgtataatggataattaatgctaaattcgt 43373491  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| |||||||| |||||||||||||||||||| |||| | ||||||||||||| | ||| |||||| ||||||||| |||||| ||||| |||    
T  43373492 gctccaactgtgatgatacgtttgtatgcatgaattgatgataattatatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtga 43373591  T
Q  252 a 252  Q
    |    
T  43373592 a 43373592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 5238350 - 5238226
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  5238350 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 5238251  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  5238250 atatgtgaaaatgaaaagttatgaa 5238226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 22907214 - 22907338
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  22907214 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 22907313  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  22907314 atatgtgaaaatgaaaagttatgaa 22907338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 24661248 - 24661372
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  24661248 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 24661347  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  24661348 atatgtgaaaatgaaaagttatgaa 24661372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 43685809 - 43685685
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  43685809 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 43685710  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  43685709 atatgtgaaaatgaaaagttatgaa 43685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 274846 - 274766
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  274846 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 641003 - 641083
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  641003 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 826809 - 826889
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  826809 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 826889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 17345832 - 17345708
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| |||||||| |||||||||||| |||| ||||| ||||||| ||||||||||||||| |||| ||||||||||||||| | ||  |||||| ||    
T  17345832 atggataattgttgcgaaattcgtgctctaactgtgatgttatgtttatatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 17345733  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||||||||    
T  17345732 ttatgtaaaaatgtgaagttatgaa 17345708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 24716714 - 24716794
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  24716714 agaatcataggagcaaaagtgaagctagagctaatagttggtgataattaaggtaagggggttagtctttatcataatcat 24716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 6774258 - 6774370
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| ||||    
T  6774258 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 6774357  T
Q  240 gagaagttatgaa 252  Q
    || ||||| ||||    
T  6774358 gataagttgtgaa 6774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 21844576 - 21844684
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgaga 243  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || | ||||||||||||||| | ||| |||||||||||||||| |||||| |    
T  21844576 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 21844675  T
Q  244 agttatgaa 252  Q
    |||||||||    
T  21844676 agttatgaa 21844684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 24549233 - 24549121
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| ||||    
T  24549233 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 24549134  T
Q  240 gagaagttatgaa 252  Q
    || ||||| ||||    
T  24549133 gataagttgtgaa 24549121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 21851969 - 21852077
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgaga 243  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || | ||||||||||||||| | |||  ||||||||||||||| |||||| |    
T  21851969 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattaaatgtttaaatatgtaaaaatgata 21852068  T
Q  244 agttatgaa 252  Q
    |||||||||    
T  21852069 agttatgaa 21852077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 30120974 - 30120862
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||| ||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  30120974 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 30120875  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  30120874 gataagttatgaa 30120862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 39115678 - 39115598
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| |||||||  |||||||||||||||| |||||| || | |||||||||    
T  39115678 agaatcataggagcaaaagtgaagcttgagctaatagttggtaataattaaggtaagggtgttagttttcatcataatcat 39115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 16674392 - 16674504
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| ||||||| |||||||||||| ||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  16674392 tgctaaattcgtgctctttctgtgatgttatgtttttatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 16674491  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  16674492 gataagttatgaa 16674504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17285600 - 17285543
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | | ||| | |||| |||||||||||||||||||||||    
T  17285600 taggagctaaagtgaagcttgggttaggaattggtgataattaaggtaagggggttag 17285543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21198005 - 21198062
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| ||||||||||||    
T  21198005 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggttag 21198062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 23150026 - 23149985
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    ||||||||||||||| | |||||||||||||| |||||||||    
T  23150026 aaattcgtgctccaattatgatgatatgtttgaatgcatgaa 23149985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 23226076 - 23226117
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    ||||| |||||| |||| ||||||||||||||||||||||||    
T  23226076 aaatttgtgctctaactatgatgatatgtttgtatgcatgaa 23226117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 5238436 - 5238404
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  5238436 taaggtaagggggttagtctttatcataatcat 5238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 22907128 - 22907160
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  22907128 taaggtaagggggttagtctttatcataatcat 22907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 24385652 - 24385684
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  24385652 taaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 24661162 - 24661194
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  24661162 taaggtaagggggttagtctttatcataatcat 24661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 43685895 - 43685863
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  43685895 taaggtaagggggttagtctttatcataatcat 43685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 48935 - 48737
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  48935 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 48836  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||| | | |||||| ||||| ||||    
T  48835 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaaaaaatgataagttgtgaa 48737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 36323 - 36233
Alignment:
Q  162 tgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||| |||||||||||| ||||||||||  ||  ||||||||||||||| | ||| ||| || | ||||| | |||||| ||||||||||    
T  36323 tgatgttatgtttgtatgtatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatgaa 36233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 51110 - 51306
Alignment:
Q  56 aggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctc 155  Q
    |||||||| | |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  51110 aggtaaggagattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgctc 51209  T
Q  156 caactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||| ||||||||| ||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||||| ||| |||||| ||||| ||||    
T  51210 caactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaataggtaaaaatgataagttgtgaa 51306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 42066 - 41879
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42066 taaggtaagggggttggtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 41967  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatga 241  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||   ||||||||| | ||| |||| | ||||||||| ||||||    
T  41966 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtcatattgttggtgaaattacatgctcaaatatgtaaaaatga 41879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 882 - 1080
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||| ||| |||   |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  882 taaggtaagggggttagtctttatcataatcatcttcactttacaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 981  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||| | ||||| ||||    
T  982 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaataataagttgtgaa 1080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 53 - 252
Target Start/End: Original strand, 36836 - 37037
Alignment:
Q  53 ttaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   || |||||| ||||||| ||||||||    
T  36836 ttaaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgcataatggataattgttgttaaattcg 36935  T
Q  151 tgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatg 250  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||| | |||||||| | ||| |||||| ||||||||| |||||| ||||| ||    
T  36936 tgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagcttgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtg 37035  T
Q  251 aa 252  Q
    ||    
T  37036 aa 37037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 15319 - 15383
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||| ||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  15319 agaatcataggagcaaaagtgaagcttgggctaatagttggagataattaaggtaagggggttag 15383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 172242 - 172044
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  172242 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtataaattttgattatggataactgttgctaaatacgtgc 172143  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| |||||||||||||||||| |||||||||| |||| |||||||||| |||| | ||| |||||| ||||| | | |||||| ||||| ||||    
T  172142 tccaactgtgatgatatgtttgtatggatgaattgatgataattgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagttgtgaa 172044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 177945 - 177747
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  177945 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtataaattttgattatggataactgttgctaaatacgtgc 177846  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| |||||||||||||||||| |||||||||| |||| |||||||||| |||| | ||| |||||| ||||| | | |||||| ||||| ||||    
T  177845 tccaactgtgatgatatgtttgtatggatgaattgatgataattgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagttgtgaa 177747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 7e-61; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 23507302 - 23507104
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| ||||||||||  |||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23507302 taaggtaagggggttagtctttatcataatcatctccattttgtaagatttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 23507203  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||  | ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  23507202 tccatttgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 23507104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 27182471 - 27182671
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  27182471 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcat 27182570  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| | | ||| |||||| ||||| | | |||||| ||||| |||    
T  27182571 gctccaactgtgatgatatgtttgtatgcatgaactgatgataattgtatgattgttgatgaaattacatgttcaaataggaacaaatgataagttgtga 27182670  T
Q  252 a 252  Q
    |    
T  27182671 a 27182671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 20623232 - 20623108
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  20623232 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 20623133  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  20623132 atatgtgaaaatgaaaagttatgaa 20623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 21233528 - 21233652
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  21233528 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 21233627  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  21233628 atatgtgaaaatgaaaagttatgaa 21233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 37053007 - 37052883
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  37053007 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 37052908  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    |||||| ||||||| ||||||||||    
T  37052907 atatgtggaaatgaaaagttatgaa 37052883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 18530988 - 18531191
Alignment:
Q  54 taaggtaagggggttagtctttaccataatc---atcatcattttgtgaattttcaaatgttgtatgaat-tttgattat-ggatgattgttgctaaatt 148  Q
    ||||||||||||||||||||| | |||||||   ||||||||||||  | ||||||||||| |||||||| ||| || || |||| ||||||||||||||    
T  18530988 taaggtaagggggttagtcttcatcataatcgtcatcatcattttgcaatttttcaaatgtggtatgaatgtttcataattggataattgttgctaaatt 18531087  T
Q  149 cgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagtta 248  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| || |||||| ||||| ||||||     
T  18531088 cgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagttg 18531187  T
Q  249 tgaa 252  Q
    ||||    
T  18531188 tgaa 18531191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 16536460 - 16536336
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||| |    
T  16536460 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaatttataataattgtatgattgttggttaaattacatgtttga 16536361  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  16536360 atatgtgaaaatgaaaagttatgaa 16536336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 22053753 - 22053957
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat--tttgtgaa--ttttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| | |||||||||||||||  ||| ||||  ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  22053753 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgaaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 22053852  T
Q  148 tcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagtt 247  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||  ||||||||||||||| | ||| |||||| || |||||| ||||| ||||||    
T  22053853 tcgtgctccaactgtgatgatatgtttgtatgtatgaattgatgatagttgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagtt 22053952  T
Q  248 atgaa 252  Q
     ||||    
T  22053953 gtgaa 22053957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 25900408 - 25900530
Alignment:
Q  130 ggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaat 229  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||  |||||| |||    
T  25900408 ggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggttaaattatatgtttgaat 25900507  T
Q  230 atgtagaaatgagaagttatgaa 252  Q
    ||||  |||||| ||||||||||    
T  25900508 atgtgaaaatgaaaagttatgaa 25900530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 34939540 - 34939416
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| | ||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||  |||||| ||    
T  34939540 atggataactgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 34939441  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||||||||    
T  34939440 ttatgtaaaaatgtgaagttatgaa 34939416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 29188284 - 29188396
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| ||||    
T  29188284 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 29188383  T
Q  240 gagaagttatgaa 252  Q
    || ||||| ||||    
T  29188384 gataagttgtgaa 29188396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 27010089 - 27009981
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgaga 243  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || | ||||||| ||||||| | ||| |||||||||||||||| |||||| |    
T  27010089 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgagtgttggtgaaattacatgtttaaatatgtaaaaatgata 27009990  T
Q  244 agttatgaa 252  Q
    |||||||||    
T  27009989 agttatgaa 27009981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 43443398 - 43443507
Alignment:
Q  143 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgag 242  Q
    |||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||||     
T  43443398 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaatgat 43443497  T
Q  243 aagttatgaa 252  Q
    ||||||||||    
T  43443498 aagttatgaa 43443507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 4199985 - 4200097
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||    | ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  4199985 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 4200084  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  4200085 gataagttatgaa 4200097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 19500151 - 19500039
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  19500151 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 19500052  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  19500051 gataagttatgaa 19500039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 22366481 - 22366593
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  22366481 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 22366580  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  22366581 gataagttatgaa 22366593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 25426880 - 25426768
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  25426880 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25426781  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  25426780 gataagttatgaa 25426768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 11584448 - 11584389
Alignment:
Q  11 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||    
T  11584448 cataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttag 11584389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 18777995 - 18778104
Alignment:
Q  143 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgag 242  Q
    |||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||||     
T  18777995 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaatgat 18778094  T
Q  243 aagttatgaa 252  Q
    ||||||||||    
T  18778095 aagttatgaa 18778104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 12626 - 12514
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | || |    
T  12626 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 12527  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  12526 gataagttatgaa 12514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 21073595 - 21073707
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| ||||||||||||||||||| |||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  21073595 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatggatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 21073694  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  21073695 gataagttatgaa 21073707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21222462 - 21222519
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||| |||||||||    
T  21222462 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtatgggggttag 21222519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 5450695 - 5450752
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||   ||||||||||||||||||||||    
T  5450695 taggagctaaagtgaagcttgggctaggaattgataataattaaggtaagggggttag 5450752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 21310709 - 21310750
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| |||| |||||||||||||| |||||||||    
T  21310709 aaattcgtgctctaactatgatgatatgtttgaatgcatgaa 21310750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 23981516 - 23981557
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  23981516 aaattcgtgctctaattatgatgatatgtttgtatgcatgaa 23981557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16105999 - 16105967
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  16105999 taaggtaagggggttagtctttatcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 20623318 - 20623286
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  20623318 taaggtaagggggttagtctttatcataatcat 20623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 21233442 - 21233474
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  21233442 taaggtaagggggttagtctttatcataatcat 21233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 25900320 - 25900352
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  25900320 taaggtaagggggttagtctttatcataatcat 25900352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 32950951 - 32950879
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgt 207  Q
    ||||||| ||||||||||||| |||| ||||| ||| || || || |||| ||||| |||| |||||||||||    
T  32950951 attgttgttaaattcgtgctctaactgtgatgttattttcgtgtgtatgatttgatgataattgtatgattgt 32950879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 37053093 - 37053061
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  37053093 taaggtaagggggttagtctttatcataatcat 37053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 5990 - 6175
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||  ||| ||||  |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5990 taaggtaagggggttagtctttatcataatcattttcactttgcaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 6089  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| ||||    
T  6090 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 6175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 23153786 - 23153586
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||| ||||||||||    
T  23153786 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgtttctaaattcgt 23153687  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||| | | |||||| ||||| |||    
T  23153686 gctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtga 23153587  T
Q  252 a 252  Q
    |    
T  23153586 a 23153586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 252
Target Start/End: Original strand, 14626045 - 14626242
Alignment:
Q  55 aaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgct 154  Q
    |||||||||||||||||  ||| || ||||||| ||| |||   |||| ||||||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  14626045 aaggtaagggggttagttattatcacaatcatcttcactttacaaattctcaaatgttgtttgaattgtgattatggataattattgctaaattcgtgct 14626144  T
Q  155 ccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |   || ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||||||||    
T  14626145 cttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttatgaa 14626242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 1657748 - 1657872
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||| |||| ||||||||||||||| | ||  |||||| ||    
T  1657748 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttggatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 1657847  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||||||||    
T  1657848 ttatgtaaaaatgtgaagttatgaa 1657872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 15862734 - 15862610
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| |||||| |||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||  |||||| ||    
T  15862734 atggataattgttactaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 15862635  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||||||||    
T  15862634 ttatgtataaatgtgaagttatgaa 15862610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 35009439 - 35009563
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||| |||| ||||| || |||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||    
T  35009439 atggataattgttgctaaattcgtgctctaactgtgatgttaagtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 35009538  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||| ||||    
T  35009539 ttatgtaaaaatgtgaagttttgaa 35009563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 19983144 - 19983224
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  19983144 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 19983224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 35015009 - 35015089
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  35015009 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 35015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 23148335 - 23148266
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt 123  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||    
T  23148335 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt 23148266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 252
Target Start/End: Original strand, 1650020 - 1650217
Alignment:
Q  53 ttaaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgt 151  Q
    |||||||||||||||||||||||| |||||||||  | ||||||   ||||||  ||||||||||||  | | || ||| |  |||  ||||| ||||||    
T  1650020 ttaaggtaagggggttagtctttatcataatcatg-taattttgc--attttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgt 1650116  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||  ||| ||||| || |||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| |||||||||  ||||| ||||| |||    
T  1650117 gctcttactgtgatgttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaagaatgataagttgtga 1650216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 18583720 - 18583640
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || | |||||||||    
T  18583720 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagttttcatcataatcat 18583640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 27751688 - 27751605
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggt 211  Q
    |||||| | ||| ||||||||||||||| || | ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  27751688 atggataaatgtagctaaattcgtgctctaattgtgatgttatgtttgtatgcatgaattgatgacaattgtatgattgttggt 27751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 21623563 - 21623506
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  21623563 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 21623506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 25175815 - 25175703
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || || || |||||||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  25175815 tgctaaattcgtgctcttgctgtgttgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25175716  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  25175715 gataagttatgaa 25175703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 27653983 - 27654095
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||| ||||||||||||||||||  ||  ||||| ||||||||| | ||| |||||| | ||||| | ||||    
T  27653983 tgctaaattcgtgctcttgctgtgatgttatgcttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 27654082  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  27654083 gataagttatgaa 27654095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 22361619 - 22361676
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| |  |||| | |||| |||||||||||||||||||||||    
T  22361619 taggagctaaagtgaagcttggcctaggaattggtgataattaaggtaagggggttag 22361676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 29666137 - 29666040
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgttt 225  Q
    |||||| ||||||| ||||||||||||| | || ||||| ||| ||  |||| |||||||||| |||| ||||||||||| ||| | ||| |||||||    
T  29666137 atggataattgttgttaaattcgtgctctagctgtgatgttattttcttatgtatgaattgatgataattgtatgattgtgggtgaaattacatgttt 29666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 16825752 - 16825866
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgta--tgattgttggttagattccatgtttaaatatgtagaa 237  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||  | ||||||||| | ||| |||||| | ||||| | ||    
T  16825752 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtaattaattgttggtgaaattacatgttcatatatgcaaaa 16825851  T
Q  238 atgagaagttatgaa 252  Q
    |||| ||||||||||    
T  16825852 atgataagttatgaa 16825866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 16887792 - 16887833
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| |||| |||| |||||||||||||||||||    
T  16887792 aaattcgtgctctaactatgataatatgtttgtatgcatgaa 16887833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 33324939 - 33324898
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  33324939 aaattcgtgctctaactaggatgatatgtttgtatgcatgaa 33324898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 35136013 - 35136054
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  35136013 aaattcgtgctctaactaggatgatatgtttgtatgcatgaa 35136054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14152704 - 14152632
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    ||||||||||||||||||| | ||||| | || | | ||||||||| |||||||||| |||| | ||||||||    
T  14152704 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggcaagggggttattcttcatcataatca 14152632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 18002395 - 18002427
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  18002395 taaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23995279 - 23995247
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  23995279 taaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 26090091 - 26090059
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  26090091 taaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 128095 - 128275
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||| ||||||||  |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  128095 taaggtaagggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtatgaattttgcttatggataattgttgctaaattcgtgc 128194  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    | ||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| |||| ||||    
T  128195 ttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatgtgta 128275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 31697 - 31787
Alignment:
Q  162 tgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||| |||||||| ||||||||||||||  ||  ||||||||||||||| | ||| ||| || | ||||| | |||||| ||||||||||    
T  31697 tgatgttatgtttgaatgcatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatgaa 31787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 12450 - 12252
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaa-ttttgattatggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||||||||||| |||||||||| | ||||||| || ||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  12450 taaggtaagggggttagtctttatcataatcatcttaattttgt-aactttcaaatgctgtatgaaattttgattatggataattgttgctaaattcgtg 12352  T
Q  153 ctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||| |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | | | ||||||||||| |||| |||||| ||||| ||||    
T  12351 ctctaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaaatacatgtttaaatgtgtaaaaatgataagttgtgaa 12252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 26340 - 26539
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg-attatggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||  || ||| || ||||||||||||||||||    
T  26340 taaggtaagggggttagtctttatcataatcatgatcattttgtaaattttcaaatgttgtatgaatttttcataatgtataattgttgctaaattcgtg 26439  T
Q  153 ctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||| |||| ||||| | | | |||||| ||||||||| |||||| ||||| ||||    
T  26440 ctccaactttgatgatatgtttgtatgcgtgaattgatgataattgtaagattattggtgaaagtacatgttcaaatatgtaaaaatgataagttgtgaa 26539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 8180 - 8304
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| | |||| ||||||||||||||| | ||| || ||| ||    
T  8180 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattggtgataattgtatgattgttggtgaaattacaggttcaa 8279  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||| ||||    
T  8280 ttatgtaaaaatgtgaagttgtgaa 8304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 6877 - 6934
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  6877 taggagttaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 247366 - 247566
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  247366 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 247465  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatga 251  Q
    ||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||  ||| | ||| |||||| ||||| | | |||||| ||||| |||    
T  247466 gctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgagggtgaaatttcatgttcaaataggaacaaatgataagttgtga 247565  T
Q  252 a 252  Q
    |    
T  247566 a 247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 19543 - 19345
Alignment:
Q  57 ggtaagggggttagtctttaccataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||| | |||||||||||| ||||| || |||||||||||||||||||||||||   || |||||| |||||||||||||||||||    
T  19543 ggtaagggggttagtcttcatcataatcatcataatttttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgc 19444  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  19443 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 19345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 21553 - 21429
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| |||||| ||    
T  21553 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 21454  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||| |||||| ||||| ||||    
T  21453 atatgtaaaaatgataagttgtgaa 21429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 89378 - 89556
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||||| ||||||||||   || |||||| |||||||||||||||||    
T  89378 taaggtaagggggttagtcttcatcatgatcatcatcattttgtaaattttcaaatgttctatgaatttttgcataatggataattgttgctaaattcgt 89477  T
Q  152 gctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaata 230  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| |||||    
T  89478 gctccaactgtgatgatatatttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaata 89556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 107708 - 107835
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||   || |||||| ||| |||||||||||||    
T  107708 taaggtaagggggttagtcttcatcatgatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataatttttgctaaattcgt 107807  T
Q  152 gctccaactttgatgatatgtttgtatg 179  Q
    ||||||||| ||||||||| ||||||||    
T  107808 gctccaactgtgatgatatatttgtatg 107835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 79786 - 79745
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  79786 aaattcgtgcactaactatgatgatatgtttgtatgcatgaa 79745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 123087 - 123288
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    ||||||||||||||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||||   || |||||| ||||||||||||||||    
T  123087 taaggtaagggggttagtcttcaccataatcatcataatttttgtaaatttgcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 123186  T
Q  151 tgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatg 250  Q
    |||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||| | | |||||| ||||| ||    
T  123187 tgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtg 123286  T
Q  251 aa 252  Q
    ||    
T  123287 aa 123288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 272362 - 272164
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| | | ||||||||| ||| |    
T  272362 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatattgtataaattttgattatggataaatattgctaaatacgtac 272263  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||| | |||||||||||||||| |||||||||| |||| |||||||||| |||  | ||| |||||| ||||| | | |||||| ||||| ||||    
T  272262 tccaactgtaatgatatgtttgtatgaatgaattgatgataattgtatgattgatggagaaattacatgttcaaataggaacaaatgataagttgtgaa 272164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 252
Target Start/End: Original strand, 4996 - 5185
Alignment:
Q  64 gggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttg-attatggatgattgttgctaaattcgtgctccaacttt 162  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||  || |||||| ||||||||||||||||| |||||||| |    
T  4996 gggttagtctttatcataatcattatcattttgtaaattttcaaatgttgtatgaatttttcataatggataattgttgctaaattcgtactccaactgt 5095  T
Q  163 gatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    || ||||||||||||||| ||||||||| |||| |||| |||||||||| | | | |||||| ||||||||| |||||| ||||| ||||    
T  5096 gacgatatgtttgtatgcgtgaattgatgataattgtaagattgttggtgaaagtacatgttcaaatatgtaaaaatgataagttgtgaa 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 54 - 240
Target Start/End: Complemental strand, 9215 - 9029
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||| ||||||||  |||||||||| |||||| |||||||| |||||||  |||||||||||||||||||    
T  9215 taaggtaagggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtacgaattttgcttatggaaaattgttgctaaattcgtgc 9116  T
Q  154 tccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatg 240  Q
    ||||  | ||||| ||||||||||||||||||| ||| |||| |||| |||||||||| | ||| |||||| || |||||| |||||    
T  9115 tccatttgtgatgttatgtttgtatgcatgaatcgatgataattgtaagattgttggtgaaattacatgttcaattatgtaaaaatg 9029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 27058 - 26934
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  27058 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 26959  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  26958 atatgtgaaaatgaaaagttatgaa 26934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 22796 - 22679
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||     
T  22796 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtg 22697  T
Q  235 gaaatgagaagttatgaa 252  Q
     |||||| ||||||||||    
T  22696 aaaatgaaaagttatgaa 22679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 22889 - 22857
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  22889 taaggtaagggggttagtctttatcataatcat 22857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 27144 - 27112
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  27144 taaggtaagggggttagtctttatcataatcat 27112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 1582 - 1706
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  1582 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 1681  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  1682 atatgtgaaaatgaaaagttatgaa 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 1496 - 1528
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  1496 taaggtaagggggttagtctttatcataatcat 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 37066 - 37190
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |    
T  37066 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 37165  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
    ||||||  |||||| ||||||||||    
T  37166 atatgtgaaaatgaaaagttatgaa 37190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41712 - 41632
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||    
T  41712 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 41632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 36980 - 37012
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  36980 taaggtaagggggttagtctttatcataatcat 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 5785 - 5668
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||| | ||| ||||||||||||||||    
T  5785 attgttgctaaattcgtgctccaactttgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgta 5686  T
Q  235 gaaatgagaagttatgaa 252  Q
     |||||| |||| |||||    
T  5685 aaaatgataagtcatgaa 5668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 5878 - 5846
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  5878 taaggtaagggggttagtctttaccataatcat 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 9192 - 8988
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||| | ||||||||| | |||||||||||||||    ||||  | ||||||||||| ||||| |||||   ||  ||||| |||||||||||||    
T  9192 taaggtaagtgtgttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgtatttttcataattggataattgttgctaaat 9093  T
Q  148 tcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagtt 247  Q
    |||||||||| || ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| || |||||| ||||| ||||||    
T  9092 tcgtgctccatctgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagtt 8993  T
Q  248 atgaa 252  Q
     ||||    
T  8992 gtgaa 8988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 146938 - 146838
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| |||||||| |||    
T  146938 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttcctaaattcatgc 146839  T
Q  154 t 154  Q
    |    
T  146838 t 146838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 149018 - 148860
Alignment:
Q  96 gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataat 193  Q
    ||||| ||||||||||||||||||||||   || || ||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||    
T  149018 gtgaaatttcaaatgttgtatgaatttttgcataattgataattgttgttaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatgat 148919  T
Q  194 aagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    || |||| |||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  148918 aattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 148860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 13769 - 13645
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||    
T  13769 atggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 13670  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||| ||||    
T  13669 ttatgtaaaaatgtgaagttgtgaa 13645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 42754 - 42677
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||   ||||||||||||||||| |||| |||||||||    
T  42754 agaatcataggagcaaaagtgaagctagagctaatagttggagata---aaggtaagggggttagtttttatcataatcat 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 534 - 636
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||    
T  534 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 633  T
Q  228 ata 230  Q
    |||    
T  634 ata 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 48443 - 48326
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| |||| ||||    
T  48443 attgttgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 48344  T
Q  235 gaaatgagaagttatgaa 252  Q
     |||||| ||||| ||||    
T  48343 aaaatgataagttgtgaa 48326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 20572 - 20493
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    |||| ||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || | ||||||||    
T  20572 agaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 20493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 41911 - 41787
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaa 227  Q
    |||||| ||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||    
T  41911 atggataattgttgttaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 41812  T
Q  228 atatgtagaaatgagaagttatgaa 252  Q
     |||||| ||||| |||||| ||||    
T  41811 ttatgtaaaaatgtgaagttgtgaa 41787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 80267 - 80187
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  80267 agaatcataggagcaaaagtgaagcttgagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 80187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 108003 - 107891
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgta 234  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| |||| || |    
T  108003 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgca 107904  T
Q  235 gaaatgagaagtt 247  Q
     |||||| |||||    
T  107903 aaaatgataagtt 107891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 89863 - 89905
Alignment:
Q  143 taaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  89863 taaattcgtgctccaactatgatgatatgtttgtatgcatgaa 89905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 64527 - 64640
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaatt-----gataataagtgtatgattgttggttagattccatgtttaaatatgtagaaa 238  Q
    ||||||||||||   || ||||| ||||||| ||||||||||||     ||| || | ||||||||||||||| | ||| |||||||||||||||| |||    
T  64527 aaattcgtgctcttgctgtgatgttatgtttatatgcatgaattatattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaa 64626  T
Q  239 tgagaagttatgaa 252  Q
    ||| ||||||||||    
T  64627 tgataagttatgaa 64640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 166116 - 166197
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatc 87  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||    
T  166116 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatc 166197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 162036 - 162111
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatc 87  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||    
T  162036 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatc 162111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 116410 - 116467
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  116410 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 116467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 31132 - 31212
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||    
T  31132 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 31212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 224
Target Start/End: Original strand, 34460 - 34556
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtt 224  Q
    |||||| ||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| ||||||    
T  34460 atggataattattgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 34556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5735 - 5809
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||||    
T  5735 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 5809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5941 - 6015
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||||    
T  5941 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 283 - 177
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgaga 243  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || | ||||||||||||||| | ||| |||||||||||||||| |||||| |    
T  283 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 184  T
Q  244 agttatg 250  Q
    |||||||    
T  183 agttatg 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 30497 - 30417
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcat 86  Q
    |||| ||||| ||| ||||||||||| ||| || || |||| |||||||||||||||||||||| | || | |||||||||    
T  30497 agaatcatagaagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttatttttcatcataatcat 30417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 13325 - 13437
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||| ||||||||||  | | ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| ||||    
T  13325 tgctagattcgtgctcttagtgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 13424  T
Q  240 gagaagttatgaa 252  Q
    || ||||| ||||    
T  13425 gataagttgtgaa 13437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 9371 - 9461
Alignment:
Q  162 tgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  9371 tgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 9461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 16269 - 16359
Alignment:
Q  162 tgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||| ||||    
T  16269 tgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 16359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 3215 - 3102
Alignment:
Q  139 ttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaa 238  Q
    |||||||||||||||||   || ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| | ||| |||||| || |||||| |||    
T  3215 ttgctaaattcgtgctcttgctgtgatgttatgtttgtatccatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaa 3116  T
Q  239 tgagaagttatgaa 252  Q
    || |||||| ||||    
T  3115 tgtgaagttgtgaa 3102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 304 - 385
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatcatc 87  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||    
T  304 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaacggggttattctttatcataatcatc 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 43226 - 43137
Alignment:
Q  163 gatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    |||| ||||||| ||||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||  ||||||||||    
T  43226 gatgttatgtttctatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagttatgaa 43137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 1304 - 1416
Alignment:
Q  140 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaat 239  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  ||  ||||||||||||||| | ||| |||||| | ||||| | ||||    
T  1304 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 1403  T
Q  240 gagaagttatgaa 252  Q
    || ||||||||||    
T  1404 gataagttatgaa 1416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 1780 - 1701
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || | ||||||||    
T  1780 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 19802 - 19881
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || | ||||||||    
T  19802 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 24106 - 24185
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    |||| ||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || | ||||||||    
T  24106 agaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 24185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 14083 - 14173
Alignment:
Q  162 tgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||| ||||| ||||||||||||||||| |||| | |||||||||| || | ||| |||||| ||||||||| |||||| ||||||||||    
T  14083 tgatgttatgtctgtatgcatgaattgatgataattatatgattgttagtgaaattacatgttgaaatatgtaaaaatgataagttatgaa 14173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 252
Target Start/End: Original strand, 21115 - 21228
Alignment:
Q  139 ttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaa 238  Q
    |||||||||||||||||    | ||||| ||||||||||| ||| ||||||| |||| | |||||||||| || | ||| |||||| ||||||||| |||    
T  21115 ttgctaaattcgtgctcttgttgtgatgttatgtttgtatccattaattgatgataattatatgattgttagtgaaattacatgttcaaatatgtaaaaa 21214  T
Q  239 tgagaagttatgaa 252  Q
    ||| ||||||||||    
T  21215 tgataagttatgaa 21228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 5254 - 5328
Alignment:
Q  178 tgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgtagaaatgagaagttatgaa 252  Q
    ||||||||||||| |||| ||||||||||||||| | ||| |||||| ||||||||| |||||| ||||||||||    
T  5254 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttatgaa 5328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 102923 - 102963
Alignment:
Q  145 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  102923 aattcgtgctccaattatgatgatatgtttgaatgcatgaa 102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 3453 - 3370
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgttggt 211  Q
    |||||| |||| |||||||||||||||| | || ||||| || ||||||||||||||||| || |||  |||||||||||||||    
T  3453 atggataattgatgctaaattcgtgctctagctgtgatgttaagtttgtatgcatgaattaatgatatttgtatgattgttggt 3370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 164 - 94
Alignment:
Q  15 ggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    ||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || | ||||||||    
T  164 ggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 6261 - 6335
Alignment:
Q  11 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttaccataatca 85  Q
    ||||||||| ||||||||||| ||| || |||| || |||||||||||||||||||||||| || | ||||||||    
T  6261 cataggagcaaaagtgaagcttgagttaatagtgggtgataattaaggtaagggggttagtgttcatcataatca 6335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 35873 - 35816
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  35873 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 35816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 499 - 442
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| ||||||| | |||| ||||| | |||||||||||||||    
T  499 taggagctaaagtgaagcttgagctaggaattggtgataactgaggtaagggggttag 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 1363 - 1420
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||| ||||||||||||| ||||||| | |||| ||||||| |||||||||||||||    
T  1363 taggaactaaagtgaagcttgagctaggaattggtgataattgaggtaagggggttag 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 1546 - 1587
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  1546 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 8691 - 8732
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  8691 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 3936 - 3863
Alignment:
Q  178 tgcatgaattgataataagtgtatgattgttggttagattccatgtttaaatatgt-agaaatgagaagttatg 250  Q
    ||||||||||||| |||| ||||||||||||||| | ||| |||||| |||||||| | |||||| ||||||||    
T  3936 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaaatgataagttatg 3863  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 8257 - 8216
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  8257 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8216  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 70307 - 70348
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  70307 aaattcgtactccaactatgatgatatgtttgtatgcatgaa 70348  T

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Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 57392 - 57424
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  57392 taaggtaagggggttagtctttatcataatcat 57424  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 76699 - 76756
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||  |||||||||||||||||||||||    
T  76699 taggagctaaagtgaagcttgggctaggaattgctgataattaaggtaagggggttag 76756  T

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Target: scaffold0084 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 56106 - 56178
Alignment:
Q  135 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataagtgtatgattgt 207  Q
    ||||||| ||||||||||||| |||| ||||| ||| || || ||||||| ||||| |||| |||||||||||    
T  56106 attgttgttaaattcgtgctctaactgtgatgttattttcgtgtgcatgatttgatgataattgtatgattgt 56178  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 1348 - 1386
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcat 182  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  1348 aaattcgtgctctaactatgatgatatgtttgtatgcat 1386  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 9603 - 9641
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcat 182  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  9603 aaattcgtgctctaactatgatgatatgtttgtatgcat 9641  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 689 - 632
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | |||||||| ||||||||||||||    
T  689 taggagctaaagtgaagcttgggctaggaattagtgataattatggtaagggggttag 632  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 7056 - 6999
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||| ||||||||||||||    
T  7056 taggagctaaagtgaaggttgggctaggaattggtgataattatggtaagggggttag 6999  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 22422 - 22463
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  22422 aaattcgtgctctaaatatgatgatatgtttgtatgcatgaa 22463  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 43651 - 43708
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  43651 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 43708  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 93773 - 93814
Alignment:
Q  144 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    ||||||||||||||| | ||||||||||| ||||||||||||    
T  93773 aaattcgtgctccaattatgatgatatgtatgtatgcatgaa 93814  T

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Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 55936 - 55904
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  55936 taaggtaagggggttagtctttatcataatcat 55904  T

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Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 108075 - 108107
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  108075 taaggtaagggggttagtctttatcataatcat 108107  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 31414 - 31357
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  31414 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 31357  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 193396 - 193429
Alignment:
Q  53 ttaaggtaagggggttagtctttaccataatcat 86  Q
    |||||||||||||||||||||||| |||||||||    
T  193396 ttaaggtaagggggttagtctttatcataatcat 193429  T

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Target: scaffold0706 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 6443 - 6475
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  6443 taaggtaagggggttagtctttatcataatcat 6475  T

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Target: scaffold0597 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 878 - 910
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  878 taaggtaagggggttagtctttatcataatcat 910  T

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Target: scaffold0465 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9882 - 9914
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  9882 taaggtaagggggttagtctttatcataatcat 9914  T

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Target: scaffold0389 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 10908 - 10868
Alignment:
Q  145 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 185  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  10908 aattcgtgctctatctatgatgatatgtttgtatgcatgaa 10868  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 13285 - 13317
Alignment:
Q  54 taaggtaagggggttagtctttaccataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  13285 taaggtaagggggttagtctttatcataatcat 13317  T

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