View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12605_low_16 (Length: 242)

Name: NF12605_low_16
Description: NF12605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12605_low_16
NF12605_low_16
[»] chr8 (42 HSPs)
chr8 (1-165)||(31535424-31535588)
chr8 (165-236)||(10134905-10134976)
chr8 (161-217)||(3444127-3444183)
chr8 (164-236)||(10134606-10134678)
chr8 (156-217)||(13364039-13364100)
chr8 (189-233)||(40832406-40832450)
chr8 (165-217)||(44553127-44553179)
chr8 (158-217)||(40229082-40229141)
chr8 (165-232)||(40449245-40449312)
chr8 (165-236)||(40832135-40832206)
chr8 (164-217)||(7041959-7042012)
chr8 (164-217)||(9115599-9115652)
chr8 (166-239)||(21015226-21015299)
chr8 (156-217)||(24456987-24457048)
chr8 (160-217)||(26060639-26060696)
chr8 (164-217)||(43633121-43633174)
chr8 (161-217)||(11713195-11713251)
chr8 (165-217)||(13462105-13462157)
chr8 (169-217)||(16905258-16905306)
chr8 (165-217)||(22594317-22594369)
chr8 (165-217)||(31988513-31988565)
chr8 (162-217)||(18476079-18476134)
chr8 (184-239)||(22191891-22191945)
chr8 (159-217)||(2221587-2221645)
chr8 (163-217)||(7116469-7116523)
chr8 (159-217)||(12873381-12873439)
chr8 (159-217)||(43633596-43633654)
chr8 (159-232)||(7791640-7791713)
chr8 (160-217)||(14920746-14920803)
chr8 (157-217)||(30865340-30865401)
chr8 (164-217)||(31445667-31445720)
chr8 (164-217)||(35224102-35224155)
chr8 (160-217)||(45123214-45123271)
chr8 (165-217)||(3292016-3292068)
chr8 (165-217)||(22013461-22013513)
chr8 (165-217)||(24456733-24456785)
chr8 (165-217)||(26060105-26060157)
chr8 (156-216)||(27785956-27786016)
chr8 (169-217)||(30864166-30864214)
chr8 (165-217)||(41155021-41155073)
chr8 (164-216)||(44978342-44978394)
chr8 (165-217)||(45466300-45466352)
[»] chr2 (40 HSPs)
chr2 (165-239)||(16581579-16581653)
chr2 (164-236)||(16203740-16203812)
chr2 (169-236)||(36065511-36065578)
chr2 (162-217)||(12602604-12602659)
chr2 (166-236)||(16581338-16581407)
chr2 (182-239)||(25945842-25945899)
chr2 (169-217)||(8885661-8885709)
chr2 (168-236)||(16203446-16203514)
chr2 (166-217)||(8893068-8893119)
chr2 (182-233)||(10373315-10373366)
chr2 (163-217)||(9401117-9401171)
chr2 (165-239)||(25946120-25946194)
chr2 (164-217)||(14848210-14848263)
chr2 (174-219)||(37412601-37412646)
chr2 (160-217)||(40469104-40469161)
chr2 (161-217)||(2822299-2822355)
chr2 (165-217)||(5381535-5381587)
chr2 (165-217)||(10708148-10708200)
chr2 (164-216)||(12601237-12601289)
chr2 (161-217)||(26424831-26424887)
chr2 (165-217)||(28189446-28189498)
chr2 (168-232)||(38978916-38978980)
chr2 (166-217)||(3093185-3093236)
chr2 (150-217)||(4104144-4104210)
chr2 (166-217)||(16330846-16330897)
chr2 (166-217)||(33200532-33200583)
chr2 (182-233)||(39109036-39109087)
chr2 (163-217)||(4602824-4602878)
chr2 (166-232)||(11129882-11129948)
chr2 (167-217)||(16712854-16712904)
chr2 (184-217)||(3603522-3603555)
chr2 (184-217)||(11131191-11131224)
chr2 (164-217)||(15136883-15136935)
chr2 (160-217)||(27246318-27246375)
chr2 (164-217)||(32194836-32194889)
chr2 (169-217)||(16329748-16329796)
chr2 (165-217)||(16736100-16736152)
chr2 (165-217)||(18064436-18064488)
chr2 (165-217)||(31450665-31450717)
chr2 (161-217)||(44915735-44915791)
[»] chr4 (41 HSPs)
chr4 (163-236)||(14251493-14251566)
chr4 (169-236)||(44303985-44304052)
chr4 (163-236)||(51399513-51399587)
chr4 (164-217)||(11108291-11108344)
chr4 (167-232)||(49905998-49906063)
chr4 (160-236)||(14251190-14251266)
chr4 (157-232)||(24045356-24045431)
chr4 (166-239)||(51399216-51399289)
chr4 (184-236)||(44304279-44304331)
chr4 (193-236)||(49905755-49905798)
chr4 (162-232)||(39321051-39321121)
chr4 (164-217)||(2735608-2735661)
chr4 (187-236)||(35016986-35017035)
chr4 (156-217)||(42369516-42369577)
chr4 (165-217)||(9091423-9091475)
chr4 (165-217)||(53594983-53595035)
chr4 (182-233)||(14947678-14947729)
chr4 (166-217)||(43630329-43630380)
chr4 (182-217)||(50282937-50282972)
chr4 (185-239)||(4892096-4892150)
chr4 (182-232)||(35016706-35016756)
chr4 (160-217)||(1098047-1098104)
chr4 (160-217)||(11815854-11815911)
chr4 (165-202)||(13631821-13631858)
chr4 (164-217)||(20614623-20614676)
chr4 (164-217)||(22813427-22813480)
chr4 (164-217)||(26281257-26281310)
chr4 (174-219)||(44710411-44710456)
chr4 (164-217)||(56271223-56271276)
chr4 (161-217)||(17475392-17475448)
chr4 (165-217)||(17475890-17475942)
chr4 (165-217)||(21217846-21217898)
chr4 (165-217)||(25618435-25618487)
chr4 (184-232)||(26280092-26280140)
chr4 (166-214)||(29859275-29859323)
chr4 (161-217)||(38866393-38866449)
chr4 (165-217)||(41610126-41610178)
chr4 (161-217)||(41845879-41845935)
chr4 (177-217)||(44169990-44170030)
chr4 (157-217)||(44304369-44304429)
chr4 (165-217)||(54136090-54136142)
[»] chr1 (51 HSPs)
chr1 (165-236)||(10719355-10719426)
chr1 (160-236)||(10719621-10719697)
chr1 (166-236)||(35814384-35814454)
chr1 (165-217)||(5804692-5804744)
chr1 (165-217)||(51241723-51241775)
chr1 (161-217)||(51242984-51243040)
chr1 (159-217)||(25088009-25088067)
chr1 (164-217)||(7964111-7964164)
chr1 (164-217)||(16659911-16659964)
chr1 (160-217)||(23281345-23281402)
chr1 (160-217)||(24326576-24326633)
chr1 (164-217)||(29021580-29021633)
chr1 (160-217)||(31697109-31697166)
chr1 (182-231)||(50682580-50682629)
chr1 (165-217)||(1524004-1524056)
chr1 (161-217)||(33753220-33753276)
chr1 (161-217)||(37483550-37483606)
chr1 (157-216)||(14118521-14118580)
chr1 (166-217)||(28050022-28050073)
chr1 (174-217)||(40703200-40703243)
chr1 (158-217)||(45305744-45305803)
chr1 (161-232)||(50123686-50123757)
chr1 (163-217)||(3798717-3798771)
chr1 (163-217)||(33784299-33784353)
chr1 (160-214)||(37708589-37708643)
chr1 (163-217)||(38980061-38980115)
chr1 (164-217)||(4550935-4550988)
chr1 (164-217)||(6328337-6328390)
chr1 (164-217)||(6714710-6714763)
chr1 (164-217)||(9881550-9881603)
chr1 (164-217)||(16268024-16268077)
chr1 (165-214)||(16659076-16659125)
chr1 (174-227)||(19986447-19986500)
chr1 (164-217)||(24381168-24381221)
chr1 (182-219)||(24655602-24655639)
chr1 (164-217)||(31488023-31488076)
chr1 (164-217)||(44114525-44114578)
chr1 (164-217)||(49548120-49548173)
chr1 (168-217)||(52750164-52750213)
chr1 (165-217)||(3798323-3798375)
chr1 (165-217)||(5463453-5463505)
chr1 (161-217)||(7334935-7334991)
chr1 (165-217)||(12501773-12501825)
chr1 (165-217)||(14244567-14244619)
chr1 (156-217)||(18794026-18794089)
chr1 (165-217)||(24370114-24370166)
chr1 (165-217)||(37483053-37483105)
chr1 (165-217)||(45678711-45678763)
chr1 (165-217)||(50227921-50227973)
chr1 (169-217)||(52179378-52179426)
chr1 (165-217)||(52412597-52412649)
[»] chr7 (45 HSPs)
chr7 (167-235)||(472599-472667)
chr7 (169-236)||(16962847-16962914)
chr7 (165-236)||(26041506-26041577)
chr7 (165-236)||(30283917-30283988)
chr7 (182-236)||(17052353-17052407)
chr7 (182-232)||(30284217-30284267)
chr7 (184-236)||(24846509-24846561)
chr7 (169-228)||(472871-472930)
chr7 (161-235)||(26041804-26041878)
chr7 (152-217)||(13965026-13965091)
chr7 (163-232)||(34621777-34621846)
chr7 (155-216)||(40851759-40851820)
chr7 (163-217)||(43704942-43704996)
chr7 (160-217)||(3217761-3217818)
chr7 (162-215)||(17236060-17236113)
chr7 (156-217)||(28460992-28461053)
chr7 (164-217)||(30765666-30765719)
chr7 (156-217)||(41691915-41691976)
chr7 (156-217)||(47987317-47987378)
chr7 (164-217)||(48095369-48095422)
chr7 (161-217)||(7776964-7777020)
chr7 (165-217)||(17278398-17278450)
chr7 (157-217)||(21433055-21433115)
chr7 (165-217)||(30474275-30474327)
chr7 (162-217)||(32072294-32072349)
chr7 (162-217)||(35085735-35085790)
chr7 (162-232)||(21709154-21709224)
chr7 (164-217)||(24733627-24733680)
chr7 (164-217)||(27284240-27284293)
chr7 (156-217)||(29414499-29414560)
chr7 (164-217)||(36721000-36721053)
chr7 (164-217)||(39143518-39143571)
chr7 (184-217)||(40740056-40740089)
chr7 (156-232)||(713054-713130)
chr7 (165-217)||(5870290-5870342)
chr7 (165-217)||(14681896-14681948)
chr7 (165-217)||(20493744-20493796)
chr7 (165-217)||(31715956-31716008)
chr7 (165-217)||(31852089-31852141)
chr7 (164-216)||(36951054-36951106)
chr7 (165-217)||(37374464-37374516)
chr7 (165-217)||(40852167-40852219)
chr7 (165-217)||(45456733-45456785)
chr7 (165-217)||(45457111-45457163)
chr7 (177-217)||(47305138-47305178)
[»] chr3 (40 HSPs)
chr3 (182-236)||(26247167-26247221)
chr3 (166-236)||(43464812-43464882)
chr3 (156-233)||(13301947-13302024)
chr3 (156-233)||(13312603-13312680)
chr3 (157-236)||(4953115-4953194)
chr3 (165-236)||(24244761-24244832)
chr3 (161-232)||(52857277-52857348)
chr3 (159-217)||(48085246-48085304)
chr3 (182-239)||(24244481-24244538)
chr3 (168-236)||(6276060-6276128)
chr3 (161-217)||(29587313-29587369)
chr3 (161-232)||(26246863-26246934)
chr3 (182-232)||(43465113-43465163)
chr3 (160-217)||(24243004-24243061)
chr3 (165-217)||(53228221-53228273)
chr3 (165-232)||(41263535-41263602)
chr3 (162-217)||(45940687-45940742)
chr3 (165-232)||(46453175-46453242)
chr3 (182-217)||(52255538-52255573)
chr3 (161-239)||(6276340-6276418)
chr3 (165-219)||(7274652-7274706)
chr3 (167-217)||(40503240-40503290)
chr3 (164-217)||(966978-967031)
chr3 (164-217)||(12739962-12740015)
chr3 (164-217)||(17514716-17514769)
chr3 (164-217)||(32305277-32305330)
chr3 (164-217)||(34521264-34521317)
chr3 (164-217)||(54831853-54831906)
chr3 (161-217)||(13355734-13355790)
chr3 (185-237)||(14859120-14859172)
chr3 (154-214)||(20963627-20963687)
chr3 (161-217)||(29191809-29191865)
chr3 (161-217)||(41208396-41208452)
chr3 (165-217)||(44712072-44712124)
chr3 (165-217)||(45871696-45871748)
chr3 (161-213)||(50819215-50819267)
chr3 (161-213)||(50856597-50856649)
chr3 (165-217)||(52254302-52254354)
chr3 (167-219)||(53841359-53841411)
chr3 (165-217)||(54108455-54108507)
[»] scaffold0220 (2 HSPs)
scaffold0220 (165-236)||(26260-26331)
scaffold0220 (166-232)||(25963-26029)
[»] chr5 (47 HSPs)
chr5 (169-236)||(1983546-1983613)
chr5 (165-235)||(17115617-17115687)
chr5 (166-236)||(18508524-18508594)
chr5 (164-217)||(24042686-24042739)
chr5 (164-239)||(35463857-35463932)
chr5 (160-217)||(37192479-37192536)
chr5 (166-217)||(14347401-14347452)
chr5 (166-217)||(30645734-30645785)
chr5 (164-239)||(35463560-35463635)
chr5 (162-217)||(38384864-38384919)
chr5 (166-217)||(39547777-39547828)
chr5 (159-217)||(19797657-19797715)
chr5 (163-217)||(24041735-24041789)
chr5 (156-217)||(5187128-5187189)
chr5 (182-235)||(14662379-14662432)
chr5 (164-217)||(19798727-19798780)
chr5 (164-217)||(28905464-28905517)
chr5 (164-217)||(28941859-28941912)
chr5 (156-232)||(35774174-35774251)
chr5 (160-217)||(38385808-38385865)
chr5 (164-217)||(39548607-39548660)
chr5 (161-217)||(435549-435605)
chr5 (164-232)||(14233086-14233154)
chr5 (165-217)||(17339794-17339846)
chr5 (157-217)||(35263485-35263545)
chr5 (182-217)||(5152950-5152985)
chr5 (166-217)||(13823700-13823751)
chr5 (188-239)||(18508816-18508867)
chr5 (159-217)||(4077422-4077480)
chr5 (167-217)||(25586299-25586349)
chr5 (164-217)||(4959559-4959612)
chr5 (164-217)||(7399075-7399128)
chr5 (164-217)||(16670035-16670088)
chr5 (164-217)||(26888583-26888636)
chr5 (165-214)||(28904629-28904678)
chr5 (165-214)||(28941024-28941073)
chr5 (164-217)||(29961808-29961861)
chr5 (171-228)||(43197644-43197701)
chr5 (169-217)||(3722092-3722140)
chr5 (157-217)||(8418519-8418578)
chr5 (156-216)||(9050445-9050505)
chr5 (165-217)||(13824653-13824705)
chr5 (157-217)||(19204935-19204995)
chr5 (165-217)||(24100707-24100759)
chr5 (165-217)||(25333195-25333247)
chr5 (164-212)||(36752241-36752289)
chr5 (161-217)||(38312320-38312376)
[»] chr6 (18 HSPs)
chr6 (163-236)||(959006-959079)
chr6 (166-235)||(959306-959375)
chr6 (164-232)||(12587845-12587913)
chr6 (157-217)||(13839875-13839935)
chr6 (165-217)||(901417-901469)
chr6 (164-217)||(12261497-12261550)
chr6 (161-232)||(28865594-28865665)
chr6 (163-217)||(26392852-26392906)
chr6 (164-217)||(8850215-8850268)
chr6 (160-217)||(27128838-27128895)
chr6 (165-217)||(3288929-3288981)
chr6 (161-217)||(3618776-3618832)
chr6 (165-217)||(17245659-17245711)
chr6 (165-217)||(17383734-17383786)
chr6 (161-217)||(22498774-22498830)
chr6 (161-213)||(24548236-24548288)
chr6 (165-217)||(28866427-28866479)
chr6 (165-217)||(31739922-31739974)
[»] scaffold0192 (1 HSPs)
scaffold0192 (166-217)||(14710-14761)
[»] scaffold0014 (1 HSPs)
scaffold0014 (165-217)||(230871-230923)
[»] scaffold0809 (1 HSPs)
scaffold0809 (162-217)||(4653-4708)
[»] scaffold0482 (1 HSPs)
scaffold0482 (159-232)||(200-273)
[»] scaffold0005 (1 HSPs)
scaffold0005 (164-217)||(1473-1526)
[»] scaffold0006 (1 HSPs)
scaffold0006 (165-217)||(83393-83445)
[»] scaffold0003 (1 HSPs)
scaffold0003 (169-217)||(300082-300130)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 31535588 - 31535424
Alignment:
Q  1 aaaaaacatgtgtcatctcataccatcactcttgaaaatttagtctaataacacgagtaaagttaatccttttttaaaatgcaataccatcattttaaaa 100  Q
    |||||| |||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31535588 aaaaaatatgtgtcatctcatacaaacgctcttgaaaatttagtctaataacacgagtaaagttaatccttttttaaaatacaataccatcattttaaaa 31535489  T
Q  101 ggttatatatttgttttgatgcatgggatgagtcaaaataatatgcaagtgtttcatttatttta 165  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31535488 ggttatatatttgttttgatgcatgcgatgagtcaaaataatatgcaagtgtttcatttatttta 31535424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 10134976 - 10134905
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||  || |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  10134976 aggcttaaatgctcttttggtcctttaagtatttatttagtatcgctttggtcccataagtaataaaaggtc 10134905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 3444183 - 3444127
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  3444183 ttttaggcttaaatgcttttttggtcccttaagtatttaattagtatcgctttggtc 3444127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 10134606 - 10134678
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||||  || | ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  10134606 taggcttaaatgctctttttgtcccttaagtatttatttggtatcgctttggtcccataagtaataaaaggtc 10134678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 13364039 - 13364100
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| |||||||| ||| ||||||||||| ||||||||||||||| ||||||||    
T  13364039 atttattttaggtttaaatgcgtttttggtcccttaaatatttatttagtatcactttggtc 13364100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 40832450 - 40832406
Alignment:
Q  189 ttaagtatttatttagtatcgctttggtctcataaataataaaag 233  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  40832450 ttaagtatttatttagtatcgctttggtcccataagtaataaaag 40832406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 44553127 - 44553179
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  44553127 aggcttaaatgcgtttttggtcccttaagtatttatttggtatcgttttggtc 44553179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 40229082 - 40229141
Alignment:
Q  158 ttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| |||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  40229082 ttattttacgcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 40229141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 40449312 - 40449245
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||  || |||||||||||||||||| || |||||||||||||||| ||| ||| ||||    
T  40449312 aggcttaaatgctattttggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaaaa 40449245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 40832135 - 40832206
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||  || |||||| |||||||||||||| |||||| |||| || ||||| ||||||||||||    
T  40832135 aggcttaaatgctattttggtcctttaagtatttatttggtatcgttttgatcccataagtaataaaaggtc 40832206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 7042012 - 7041959
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  7042012 taggctaaattgcatttttggtcccttaactatttatatagtatcgctttggtc 7041959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 9115599 - 9115652
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  9115599 taggcttaaatgctattttggtcccttaagtatttagttggtatcgctttggtc 9115652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 21015299 - 21015226
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||| | | || ||| |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  21015299 ggcttaaatgcttatttgatcctttaaatatttatttggtatcgctttggtcccataagtaataaaaagtctgt 21015226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 24457048 - 24456987
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||| || ||||||| ||||||||||| ||||||  ||||||||| ||||||    
T  24457048 atttattttaggctaaattgcatttttggtcccttaactatttaggtagtatcgccttggtc 24456987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 26060696 - 26060639
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  26060696 attttaggcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtc 26060639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 43633121 - 43633174
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  43633121 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 43633174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 11713195 - 11713251
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  11713195 ttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 11713251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 13462105 - 13462157
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  13462105 aggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 13462157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 16905258 - 16905306
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||  || ||||||||||||||||||||| ||||||||||||||    
T  16905258 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtc 16905306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 22594317 - 22594369
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||   || ||||||||||||||||||||| ||||||||||||||    
T  22594317 aggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtc 22594369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 31988513 - 31988565
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  31988513 aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 31988565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 18476134 - 18476079
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  18476134 tttaggcttaaatgctcttttggtcccttaactatttaatttgtatcgctttggtc 18476079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 22191945 - 22191891
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||||||| |||||||||||||||||| | ||| |||||||| ||||||    
T  22191945 gtcccttaagtattt-tttagtatcgctttggtcccgtaagtaataaaaagtctgt 22191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 2221587 - 2221645
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  2221587 tatttaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 2221645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 7116469 - 7116523
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  7116469 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 7116523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 12873439 - 12873381
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| || || |||| ||||||||||| |||||| ||||||||| |||||||    
T  12873439 tattttaggctaaattgtatttttggtcccttaactatttaattagtatcgttttggtc 12873381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 43633654 - 43633596
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| ||||||||||||| || || |||||||| |||||| || ||||||||||||||    
T  43633654 tatttaaggcttaaatgcacttttgatcccttaactatttaattggtatcgctttggtc 43633596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 7791640 - 7791713
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||| |||||||||  || ||||||||||| |||||| || || ||||||||||| | ||| ||||||||    
T  7791640 tattttagacttaaatgctcttttggtcccttaactatttaattggtctcgctttggtcccttaactaataaaa 7791713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 14920803 - 14920746
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||| || || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  14920803 attttagactgaattgcatttttggtcccttaactatttaagtagtatcgctttggtc 14920746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 30865401 - 30865340
Alignment:
Q  157 tttattttaggcttaaatgc-atttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| || |||||  |||||||    
T  30865401 tttattttagacttaaatgctatttttggtcccttaagtatttaattggtatcattttggtc 30865340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 31445667 - 31445720
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  31445667 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 31445720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 35224155 - 35224102
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||||||||| |||||| ||||||||| |||||||    
T  35224155 taggctaaattgcatttttggtcccttaactatttagttagtatcgttttggtc 35224102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 45123214 - 45123271
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  45123214 atttaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 45123271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 3292016 - 3292068
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| || ||||||||||| |||||| || |||||| |||||||    
T  3292016 aggcttaaatgcacttttggtcccttaattatttaattggtatcgttttggtc 3292068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 22013461 - 22013513
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  22013461 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 22013513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 24456733 - 24456785
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  24456733 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 24456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 26060105 - 26060157
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  26060105 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 26060157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 27785956 - 27786016
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    |||| |||| |||||||||||  || ||||||||||| |||||| || |||||||||||||    
T  27785956 atttttttttggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggt 27786016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 30864166 - 30864214
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||  || |||||||||||||||||| || ||||||||||||||    
T  30864166 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 30864214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 41155073 - 41155021
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  41155073 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 41155021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 44978394 - 44978342
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    |||||||||||||  || || ||||||||||||||| || |||||||||||||    
T  44978394 taggcttaaatgctcttttgatcccttaagtatttaattggtatcgctttggt 44978342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 45466352 - 45466300
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  45466352 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 45466300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 16581653 - 16581579
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  16581653 aggcttaaatgcacttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtctgt 16581579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 16203812 - 16203740
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  16203812 taggcttaaatacatttttggtcccttaagtatctatttagtatcgctttggtcccataagtaataaaaggtc 16203740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 36065578 - 36065511
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||  || |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  36065578 ttaaatgctcttttggtcctttaagtatttatttagtatcgttttggtctcataagtaataaaaggtc 36065511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 12602659 - 12602604
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  12602659 tttagacttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtc 12602604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 16581338 - 16581407
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||  || ||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||    
T  16581338 ggcttaaatgctcttttggtcccttaagtatttatttgggatcgctttggtc-cataagtaataaaaggtc 16581407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 25945842 - 25945899
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||||||||||||  |||||||||||||| ||||| ||||||||| |||||    
T  25945842 tggtcccttaagtatttattcggtatcgctttggtcccataagtaataaaagatctgt 25945899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 8885661 - 8885709
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  8885661 ttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtc 8885709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 16203446 - 16203514
Alignment:
Q  168 cttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||  || ||||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||    
T  16203446 cttaaatgctcttttggtcccttaaatatttatttggtatcgctttgatctcgtaagtaataaaaggtc 16203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 8893119 - 8893068
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| ||||||||||||||||||||| |||| |||||||||    
T  8893119 ggcttaaatgcgtttttggtcccttaagtatttatttggtattgctttggtc 8893068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 10373366 - 10373315
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaag 233  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||    
T  10373366 tggtcccttaaatatttatttagtatcgctttggtcccctaagtaataaaag 10373315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 9401117 - 9401171
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  9401117 ttaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 9401171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 25946194 - 25946120
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||||  || | |||||||||||||||||||  ||| ||||||||  ||||| |||||||||||||||    
T  25946194 aggcttaaatgctcttttagtcccttaagtatttatttgatattgctttggttccataagtaataaaaggtctgt 25946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 14848263 - 14848210
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| |||||||||||||||||| || ||||| ||||||||    
T  14848263 taggcttaaatgcttttttggtcccttaagtatttaattggtatcactttggtc 14848210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 37412601 - 37412646
Alignment:
Q  174 tgcatttgtggtcccttaagtatttatttagtatcgctttggtctc 219  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||    
T  37412601 tgcatttttggtcccttaactatttagttagtatcgctttggtctc 37412646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 40469161 - 40469104
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| |||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  40469161 attttaggtttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 40469104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 2822299 - 2822355
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||  ||| ||||||||||| |||||| || ||||||||||||||    
T  2822299 ttttaggcttaaatgtttttttggtcccttaactatttaattggtatcgctttggtc 2822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 5381535 - 5381587
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  5381535 aggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 5381587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 10708148 - 10708200
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||||||||||||| ||||| ||||||||    
T  10708148 aggcttaaatgcgcttttggtcccttaagtatttatttggtatcactttggtc 10708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 12601237 - 12601289
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    |||||||||||||  || ||||||||||| ||||||||| |||||||||||||    
T  12601237 taggcttaaatgcgcttttggtcccttaaatatttatttggtatcgctttggt 12601289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 26424887 - 26424831
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  26424887 ttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 26424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 28189446 - 28189498
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  28189446 aggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 28189498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 38978980 - 38978916
Alignment:
Q  168 cttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||| | | ||||||||||| ||||||||| |||||||||||||| ||||  ||||||||    
T  38978980 cttaaatgcttatttggtcccttaaatatttatttggtatcgctttggtcccatatgtaataaaa 38978916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 3093185 - 3093236
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| |||||| |||| ||||||||| ||||||||||||||    
T  3093185 ggcttaaatgcgtttttggtccattaactatttatttggtatcgctttggtc 3093236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 4104144 - 4104210
Alignment:
Q  150 tgtttcatttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| |||||| |||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  4104144 tgtttcatgtatttt-ggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 4104210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 16330897 - 16330846
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||  || ||| ||||||||||||||||| ||||||||||||||    
T  16330897 ggcttaaatgctcttttggccccttaagtatttatttggtatcgctttggtc 16330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 33200583 - 33200532
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  33200583 ggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 33200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 39109036 - 39109087
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaag 233  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| ||| |||||    
T  39109036 tggtcccttaagtatttagttagtatcgttttggtctcttaactaaaaaaag 39109087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 4602878 - 4602824
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  4602878 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 4602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 11129882 - 11129948
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||||  || ||||| ||||||||||||||| ||||| |||||||| | ||| ||||||||    
T  11129882 ggcttaaatgctcttttggtctcttaagtatttatttggtatcactttggtcccttaactaataaaa 11129948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 16712904 - 16712854
Alignment:
Q  167 gcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  16712904 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 16712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 3603522 - 3603555
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||| ||||||||||||||||||||||||    
T  3603522 gtcccttaactatttatttagtatcgctttggtc 3603555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 11131224 - 11131191
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||| ||||||||||||||    
T  11131224 gtcccttaagtatttatttggtatcgctttggtc 11131191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 15136935 - 15136883
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  15136935 taggcttaaatgctttt-tggtcccttaactatttaattggtatcgctttggtc 15136883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 27246375 - 27246318
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||| || ||||||| ||||||||||| |||||| |||| ||||||||||||    
T  27246375 atttaaggctaaattgcatttttggtcccttaactatttaattaggatcgctttggtc 27246318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 32194889 - 32194836
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  32194889 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 32194836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 16329748 - 16329796
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||  || ||||| ||||||||||||||| ||||||||||||||    
T  16329748 ttaaatgctcttttggtctcttaagtatttatttggtatcgctttggtc 16329796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 16736100 - 16736152
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  16736100 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 16736152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 18064488 - 18064436
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || || ||||||||||||||| || ||||||||||||||    
T  18064488 aggcttaaatgctcttttgatcccttaagtatttaattggtatcgctttggtc 18064436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 31450665 - 31450717
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  31450665 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 31450717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 44915735 - 44915791
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||| | || ||||||| | ||||||||| |||||| |||||||||||||||||    
T  44915735 ttttaggttaaattgcatttttagtcccttaactatttaattagtatcgctttggtc 44915791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 14251566 - 14251493
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  14251566 ttagacttaaatgcatttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtc 14251493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 44303985 - 44304052
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||  || |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  44303985 ttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtc 44304052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 51399587 - 51399513
Alignment:
Q  163 ttaggcttaaatgca-tttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||    
T  51399587 ttaggcttaaatgctctttttggtcccttaagtatttatttggtatcgctttggtcccttaagtaataaaaggtc 51399513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 11108291 - 11108344
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  11108291 taggcttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtc 11108344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 49906063 - 49905998
Alignment:
Q  167 gcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||  || |||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  49906063 gcttaaatgctcttttggtcccttaagtatttatttagtatcgctttcgtcccataagtaataaaa 49905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 14251190 - 14251266
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||| |||||||||||  || ||||||||||||||||||||| ||||||||||||||   ||| ||||||||||||    
T  14251190 atttttggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcctctaagtaataaaaggtc 14251266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 24045356 - 24045431
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||||||||||  || ||||||||||| |||||| || |||||||||||||||| ||| ||| ||||    
T  24045356 tttattttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaactaaaaaaa 24045431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 51399216 - 51399289
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||| |   ||||||||||| ||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  51399216 ggcttaaatgcttacttggtcccttaaatatttatttggtatcgctttggtcccataagtaataaaaagtctgt 51399289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 44304331 - 44304279
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  44304331 gtcccttaagtatttatttggtatcgctttggtgccataagtaataaaaggtc 44304279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 49905755 - 49905798
Alignment:
Q  193 gtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  49905755 gtatttatttggtatcgctttggtctcataagtaataaaaggtc 49905798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 39321051 - 39321121
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||||||||  || ||||||||||| |||||| || |||||||||||||||| ||| ||| ||||    
T  39321051 tttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaactaaaaaaa 39321121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 2735661 - 2735608
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| ||||||||| ||||||||||||||    
T  2735661 taggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtc 2735608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 35017035 - 35016986
Alignment:
Q  187 ccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||||||| |||| ||||||||| |||||||||| |||||||    
T  35017035 ccttaagtatttatttggtattgctttggtcccataaataattaaaggtc 35016986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 42369577 - 42369516
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  42369577 attttttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 42369516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 9091423 - 9091475
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||||||||||||| | ||||||||||||    
T  9091423 aggcttaaatgctcttttggtcccttaagtatttatttggaatcgctttggtc 9091475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 53594983 - 53595035
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || |||||| |||||||||||||| ||||||||||||||    
T  53594983 aggcttaaatgccattttggtcctttaagtatttatttggtatcgctttggtc 53595035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 14947729 - 14947678
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaag 233  Q
    |||||||||||||||||| || |||||||||||||||| ||| ||| |||||    
T  14947729 tggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaaaag 14947678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 43630380 - 43630329
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| |||||| || ||||||||||| ||||||||||||||    
T  43630380 ggcttaaatgcgtttttggtccttttagtatttatttggtatcgctttggtc 43630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 50282972 - 50282937
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||||| ||||||||||||||    
T  50282972 tggtcccttaagtatttatttggtatcgctttggtc 50282937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 4892150 - 4892096
Alignment:
Q  185 tcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    |||||||||| ||| ||||||||||||| |||| ||||| ||||||||| |||||    
T  4892150 tcccttaagtttttttttagtatcgcttaggtcgcataagtaataaaagatctgt 4892096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 35016706 - 35016756
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||||||||||| ||||||||||||||  | ||||| ||||||||    
T  35016706 tggtcccttaagtatttacttagtatcgctttgaccccataagtaataaaa 35016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 1098047 - 1098104
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  1098047 atttaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 1098104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 11815854 - 11815911
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||||||   || ||||||||||| ||||||||| ||||||||||||||    
T  11815854 atttaaggcttaaatgtgcttttggtcccttaactatttatttggtatcgctttggtc 11815911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 13631858 - 13631821
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttattt 202  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  13631858 aggcttaaatgcgtttttggtcccttaagtatttattt 13631821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 20614676 - 20614623
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  20614676 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 20614623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 22813480 - 22813427
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| |||||||  || |||||||||||||||||| || ||||||||||||||    
T  22813480 taggcataaatgctcttttggtcccttaagtatttagttggtatcgctttggtc 22813427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 26281310 - 26281257
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| |   ||||||||||||||||||||| |||||| |||||||    
T  26281310 taggcttaaatgcttaattggtcccttaagtatttatttggtatcgttttggtc 26281257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 44710411 - 44710456
Alignment:
Q  174 tgcatttgtggtcccttaagtatttatttagtatcgctttggtctc 219  Q
    ||||||| ||||||||||| ||||||  ||||||||||||||||||    
T  44710411 tgcatttttggtcccttaactatttaggtagtatcgctttggtctc 44710456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 56271276 - 56271223
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  56271276 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 56271223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 17475392 - 17475448
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  17475392 tttttggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 17475448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 17475942 - 17475890
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  17475942 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 17475890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 21217846 - 21217898
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  21217846 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 21217898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 25618435 - 25618487
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  25618435 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 25618487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 26280092 - 26280140
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||||||||| |||||| ||||||||| ||| ||| ||||    
T  26280092 gtcccttaagtatttatttggtatcgttttggtctcttaactaaaaaaa 26280140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 29859323 - 29859275
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttg 214  Q
    |||||||||||  || |||||||||||||||||| || |||||||||||    
T  29859323 ggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttg 29859275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 38866393 - 38866449
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||| || || |||| ||||||||||| ||||||  ||||||||||||||||    
T  38866393 ttttaggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtc 38866449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 41610126 - 41610178
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  41610126 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 41610178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 41845935 - 41845879
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| ||  |||||||||||||    
T  41845935 ttttaggcttaaatgctcttttggtcccttaactatttaattgatatcgctttggtc 41845879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 44169990 - 44170030
Alignment:
Q  177 atttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||| |||||| |||||||||||||||||    
T  44169990 atttttggtcccttaactatttaattagtatcgctttggtc 44170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 44304429 - 44304369
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| |||||||||||  || ||||| ||||| |||||| || ||||||||||||||    
T  44304429 tttatttttggcttaaatgctcttttggtctcttaactatttaattggtatcgctttggtc 44304369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 54136090 - 54136142
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  54136090 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 54136142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 10719355 - 10719426
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10719355 aggcttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtcccataaataataaaaggtc 10719426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 10719697 - 10719621
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||| |||||||||||  || ||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  10719697 atttttggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggttccataagtaataaaaggtc 10719621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 35814454 - 35814384
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||  || |||||||||||||||||| || |||||||||||||| | ||| ||||||||||||    
T  35814454 ggcttaaatgctcttttggtcccttaagtatttacttggtatcgctttggtcccttaagtaataaaaggtc 35814384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 5804692 - 5804744
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||||||||||||| ||||||||||||||    
T  5804692 aggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtc 5804744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 51241723 - 51241775
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||| | ||| ||||||||||||||||||||| ||||||||||||||    
T  51241723 aggcttaaattcgtttttggtcccttaagtatttatttggtatcgctttggtc 51241775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 51243040 - 51242984
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||| ||| | ||||||||||||||||||  ||||||||||||||    
T  51243040 ttttaggcttaaatgcgtttttagtcccttaagtatttattcggtatcgctttggtc 51242984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 25088009 - 25088067
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  25088009 tattttaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 25088067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 7964111 - 7964164
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| ||||||||| ||||||||||||||    
T  7964111 taggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtc 7964164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16659964 - 16659911
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||   || ||||||||||||||||||||| ||||||||||||||    
T  16659964 taggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtc 16659911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 23281402 - 23281345
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  23281402 attttaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 23281345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 24326576 - 24326633
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| |||||||||||  || ||||||||||| ||||||||| ||||||||||||||    
T  24326576 atttttggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtc 24326633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 29021580 - 29021633
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  ||| ||||||||||| ||||||||| ||||||||||||||    
T  29021580 taggcttaaatgtgtttttggtcccttaactatttatttggtatcgctttggtc 29021633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 31697109 - 31697166
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||| |||||||||  || ||||||||||| ||||||||| ||||||||||||||    
T  31697109 attttagacttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtc 31697166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 50682629 - 50682580
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaa 231  Q
    ||||||||||| ||||| ||| |||||||||||||| |||||||||||||    
T  50682629 tggtcccttaattatttttttggtatcgctttggtcccataaataataaa 50682580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 1524004 - 1524056
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  1524004 aggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 1524056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 33753220 - 33753276
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  33753220 ttttaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 33753276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 37483606 - 37483550
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  37483606 ttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 37483550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 14118521 - 14118580
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    ||||||||||||| || ||||||| ||||||||||| ||||||  ||||||| |||||||    
T  14118521 tttattttaggctaaattgcatttttggtcccttaactatttaggtagtatcactttggt 14118580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 28050073 - 28050022
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  28050073 ggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 28050022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 40703243 - 40703200
Alignment:
Q  174 tgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||    
T  40703243 tgcatttttggtcccttaactatttaattagtatcgctttggtc 40703200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 45305803 - 45305744
Alignment:
Q  158 ttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| || ||||||| ||||||||||| ||||||  ||||||| ||||||||    
T  45305803 ttattttaggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtc 45305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 50123686 - 50123757
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||| |||||||||||  || || |||||||| ||||||||| |||||||||||||||| ||| ||| ||||    
T  50123686 tttttggcttaaatgcgcttttgatcccttaactatttatttggtatcgctttggtctcttaactaaaaaaa 50123757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 3798771 - 3798717
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  3798771 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 3798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 33784299 - 33784353
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  ||| ||||||||||| |||||| || ||||||||||||||    
T  33784299 ttaggcttaaatgtgtttttggtcccttaactatttaattggtatcgctttggtc 33784353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 37708643 - 37708589
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttg 214  Q
    |||||||||||||||||  || ||||||||||| |||||| || |||||||||||    
T  37708643 attttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttg 37708589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 38980115 - 38980061
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  38980115 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 38980061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 4550988 - 4550935
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||| ||||| |||||| |||||||||||||||||    
T  4550988 taggctaaattgcatttttggtctcttaactatttaattagtatcgctttggtc 4550935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 6328390 - 6328337
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||| |||  || |||||||||||||||||| || ||||||||||||||    
T  6328390 taggcttaattgctcttttggtcccttaagtatttaattggtatcgctttggtc 6328337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 6714763 - 6714710
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  6714763 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 6714710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 9881550 - 9881603
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  9881550 taggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 9881603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16268077 - 16268024
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  16268077 taggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 16268024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 16659076 - 16659125
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttg 214  Q
    ||||||||||||  || ||||||||||||||||||||| |||||| ||||    
T  16659076 aggcttaaatgctcttttggtcccttaagtatttatttggtatcgttttg 16659125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 19986500 - 19986447
Alignment:
Q  174 tgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataa 227  Q
    ||||||| ||||||||||| ||||||  ||||||| |||||||||| |||||||    
T  19986500 tgcatttttggtcccttaactatttaggtagtatcactttggtctcttaaataa 19986447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  24381221 taggcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtc 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 24655602 - 24655639
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctc 219  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  24655602 tggtcccttaagtatttaggtagtatcgctttggtctc 24655639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 31488023 - 31488076
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  31488023 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 31488076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 44114578 - 44114525
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  44114578 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 44114525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 49548120 - 49548173
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  49548120 taggtttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 49548173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 52750164 - 52750213
Alignment:
Q  168 cttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||||||||||    
T  52750164 cttaaatgcatttttggttcctcaactatttatttggtatcgctttggtc 52750213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 3798323 - 3798375
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  3798323 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 3798375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 5463505 - 5463453
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| |||||||||| | ||||||||| ||||||  ||||||||||||||||    
T  5463505 aggctaaaatgcatttttagtcccttaactatttagctagtatcgctttggtc 5463453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 7334991 - 7334935
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || |||||| |||||||    
T  7334991 ttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtc 7334935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 12501825 - 12501773
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  ||  ||||||||||||||||| ||||||||| |||||||    
T  12501825 aggcttaaatgctctttaggtcccttaagtatttaattagtatcgttttggtc 12501773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 14244619 - 14244567
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  14244619 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 14244567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 18794089 - 18794026
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttag--tatcgctttggtc 217  Q
    |||||||||||||| || ||||||| ||||||||||| ||||||  |||  |||||||||||||    
T  18794089 atttattttaggctaaattgcatttttggtcccttaactatttaagtagtatatcgctttggtc 18794026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 24370114 - 24370166
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  24370114 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 24370166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 37483053 - 37483105
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  37483053 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 37483105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 45678711 - 45678763
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  45678711 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 45678763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 50227973 - 50227921
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  50227973 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 50227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 52179426 - 52179378
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  52179426 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 52179378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 52412597 - 52412649
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| |||| ||||| ||||||||||| ||||||  ||||||||||||||||    
T  52412597 aggctaaaatacatttttggtcccttaactatttaggtagtatcgctttggtc 52412649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 472599 - 472667
Alignment:
Q  167 gcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggt 235  Q
    ||||||||||  || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  472599 gcttaaatgctcttttggtcccttaagtatttatttagtatcgttttggtctcataagtaataaaaggt 472667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 16962847 - 16962914
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||  || ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  16962847 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtctcataagtaataaaaggtc 16962914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 26041506 - 26041577
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||  || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  26041506 aggcttaaatgctcttttggtcccttaagtatttattcagtatcgctttggtcccataagtaataaaaggtc 26041577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 30283917 - 30283988
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||  || ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  30283917 aggcttaaatgctcttttggtcccttaagtatttatttggtatcgttttggtctcataagtaataaaaggtc 30283988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 17052353 - 17052407
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  17052353 tggtcccttaagaatttatttagtatcgctttggtcccataagtaataaaaggtc 17052407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 30284267 - 30284217
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  30284267 tggtctcttaagtatttatttagtatcgctttggtctcataagtaataaaa 30284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 24846561 - 24846509
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  24846561 gtcctttaagtatttatttagtatcgctttggttccataaataataaaaggtc 24846509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 472930 - 472871
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataat 228  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  472930 ttaaatgcttttttggtcccttaagtatttatttggtatcgctttggtcccataagtaat 472871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 26041878 - 26041804
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggt 235  Q
    |||| |||||||||||  || ||||||||||| ||||||||| ||||||||||||||  |||| |||||||||||    
T  26041878 tttttggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcctataagtaataaaaggt 26041804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 13965026 - 13965091
Alignment:
Q  152 tttcatttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  13965026 tttcattttttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 13965091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 34621846 - 34621777
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||||  || |||||||||||||||||| || |||||||||||||||| ||| ||| ||||    
T  34621846 ttaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaaaa 34621777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 40851759 - 40851820
Alignment:
Q  155 catttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    ||||||||||||||||||||||  || ||||||||||| |||||| || |||||||||||||    
T  40851759 catttattttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggt 40851820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 43704942 - 43704996
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  43704942 ttaggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 43704996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 3217818 - 3217761
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  3217818 attttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 3217761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 17236060 - 17236113
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttgg 215  Q
    |||||||||||||||  || |||||| |||||||||||||| ||||||||||||    
T  17236060 tttaggcttaaatgctcttttggtcctttaagtatttatttggtatcgctttgg 17236113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 28461053 - 28460992
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||||||||||   || |||||||||||||||||| || ||||||||||||||    
T  28461053 attttttttaggcttaaatgttcttttggtcccttaagtatttaattggtatcgctttggtc 28460992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 30765666 - 30765719
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  30765666 taggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 30765719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 41691915 - 41691976
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||| |||||||||| |||| ||||||||||| |||||| || |||||| |||||||    
T  41691915 atttatttttggcttaaatgtatttttggtcccttaactatttaattggtatcgttttggtc 41691976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 47987317 - 47987378
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| ||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  47987317 atttatcttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 47987378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 48095422 - 48095369
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  48095422 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 48095369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 7777020 - 7776964
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  7777020 ttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 7776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 17278398 - 17278450
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  17278398 aggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 17278450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 21433115 - 21433055
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||||||||||  || |||||| ||||||||||| || ||||||||||||||    
T  21433115 tttaatttaggcttaaatgctcttttggtccattaagtatttaattggtatcgctttggtc 21433055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 30474275 - 30474327
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||| || |||||||| ||||||| | ||||||||||||||    
T  30474275 aggcttaaatgcatttttgatcccttaactatttatctggtatcgctttggtc 30474327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 32072294 - 32072349
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||  || |||||||||||||||||| ||  |||||||||||||    
T  32072294 tttaggcttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtc 32072349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 35085735 - 35085790
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  35085735 tttaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 35085790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 21709154 - 21709224
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||| |||  || | ||||||||| || || |||||||||||||||||| ||||| ||||||||    
T  21709154 tttaggcttaattgctattttcgtcccttaactaattttttagtatcgctttggtcccataattaataaaa 21709224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 24733627 - 24733680
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  24733627 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 24733680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 27284240 - 27284293
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  27284240 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 27284293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 29414560 - 29414499
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| |||||||||  || ||||||||||| |||||| |  ||||||||||||||    
T  29414560 atttattttagacttaaatgctcttttggtcccttaactatttaataggtatcgctttggtc 29414499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 36721053 - 36721000
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || |||||||||||||||||| ||  |||||||||||||    
T  36721053 taggcttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtc 36721000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 39143571 - 39143518
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  39143571 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 39143518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 40740089 - 40740056
Alignment:
Q  184 gtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||| ||||||||||||||||||||||||    
T  40740089 gtcccttaattatttatttagtatcgctttggtc 40740056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 713130 - 713054
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||| |||| |||||||||||  || ||||||||||| |||||| || |||||| ||||||||| ||| ||| ||||    
T  713130 atttttttttggcttaaatgctcttttggtcccttaattatttaattggtatcgttttggtctcttaactaaaaaaa 713054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 5870342 - 5870290
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| ||||||| |||||||||    
T  5870342 aggcttaaatgctcttttggtcccttaactatttaattagtattgctttggtc 5870290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 14681896 - 14681948
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || || |||||||| ||||||||| ||||||||||||||    
T  14681896 aggcttaaatgcgcttttgatcccttaattatttatttggtatcgctttggtc 14681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 20493744 - 20493796
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  20493744 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 20493796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 31716008 - 31715956
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  31716008 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 31715956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 31852141 - 31852089
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  31852141 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 31852089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 36951054 - 36951106
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    |||||||||||||  || ||||||||||| |||||| || |||||||||||||    
T  36951054 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggt 36951106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 37374516 - 37374464
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  37374516 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 37374464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 40852219 - 40852167
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  40852219 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 40852167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 45456733 - 45456785
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  45456733 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 45456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 45457163 - 45457111
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  45457163 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 45457111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 47305138 - 47305178
Alignment:
Q  177 atttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||| |||||| |||||||||||||||||    
T  47305138 atttttggtcccttaactatttaattagtatcgctttggtc 47305178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 26247221 - 26247167
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  26247221 tggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtc 26247167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 43464812 - 43464882
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||  || ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  43464812 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccataagtaataaaaggtc 43464882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 13302024 - 13301947
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaag 233  Q
    ||||||| |||||||||||||  || ||||||||||||||||||||| |||||||||||||| | ||| |||||||||    
T  13302024 atttattataggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccgtaagtaataaaag 13301947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 13312680 - 13312603
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaag 233  Q
    ||||||| |||||||||||||  || ||||||||||||||||||||| |||||||||||||| | ||| |||||||||    
T  13312680 atttattataggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccgtaagtaataaaag 13312603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 4953115 - 4953194
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||| ||| |||||||||||  || |||||||||||| |||||||| |||||||||||||| | ||| ||||||||||||    
T  4953115 tttagttttggcttaaatgctcttttggtcccttaaggatttatttggtatcgctttggtcccttaagtaataaaaggtc 4953194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 24244832 - 24244761
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||||||  || ||||||||||||||||||||| ||||||||||| |  ||||| ||||||||||||    
T  24244832 aggcttaaatgctattttggtcccttaagtatttatttggtatcgctttgataccataagtaataaaaggtc 24244761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 52857348 - 52857277
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||| |||||||||||  || ||||||||||||||||||||| |||||||||||||| | ||||||| ||||    
T  52857348 ttttgggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaaataaaaaaa 52857277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 48085304 - 48085246
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  48085304 tattttaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 48085246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 24244481 - 24244538
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    |||||||||||||||||||||||||||| |||| || ||||| ||||||||| |||||    
T  24244481 tggtcccttaagtatttatttagtatcgttttgatcccataagtaataaaagatctgt 24244538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 6276060 - 6276128
Alignment:
Q  168 cttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||  || ||||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||    
T  6276060 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttgatccaataagtaataaaaggtc 6276128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 29587313 - 29587369
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||||||| || ||||||||||||||| || ||||||||||||||    
T  29587313 tttttggcttaaatgcatttttgctcccttaagtatttaattggtatcgctttggtc 29587369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 26246863 - 26246934
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||||||||   || ||||||||||||||||||||| |||||| ||||||| | ||| ||||||||    
T  26246863 ttttaggcttaaatgatcttttggtcccttaagtatttatttggtatcgttttggtcccgtaagtaataaaa 26246934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 43465163 - 43465113
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||| |||||||||||||||||||||| ||||||| ||||| ||||||||    
T  43465163 tggtctcttaagtatttatttagtatcgttttggtcccataagtaataaaa 43465113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 24243061 - 24243004
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  24243061 attttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 24243004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 53228273 - 53228221
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||| |  || ||||||||||||||||||||| ||||||||||||||    
T  53228273 aggcttaaatactcttttggtcccttaagtatttatttggtatcgctttggtc 53228221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 41263602 - 41263535
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||  || ||||||||||| |||||| || |||||||||||||||| ||| ||| ||||    
T  41263602 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaactaaaaaaa 41263535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 45940742 - 45940687
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  45940742 tttaggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtc 45940687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 46453242 - 46453175
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||   | ||||||||||| ||||||||| |||| | ||||||||||||| ||||||||    
T  46453242 aggcttaaatgctcatttggtcccttaaatatttatttggtattgttttggtctcataagtaataaaa 46453175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 52255573 - 52255538
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52255573 tggtcccttaagtatttatttggtatcgctttggtc 52255538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 6276418 - 6276340
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    |||||| |||||||||  || || || |||||||||||||||||||||| ||| ||| || || |||||||| ||||||    
T  6276418 ttttagacttaaatgctcttttgatctcttaagtatttatttagtatcgatttagtcccacaattaataaaatgtctgt 6276340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 7274652 - 7274706
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctc 219  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||||    
T  7274652 aggctaaattgcatttttggtcccttaaatatttaggtagtatcgctttggtctc 7274706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 40503240 - 40503290
Alignment:
Q  167 gcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||  || |||||||||||||||||| || ||||||||||||||    
T  40503240 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 40503290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 966978 - 967031
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  966978 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 967031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 12739962 - 12740015
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  12739962 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 12740015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 17514769 - 17514716
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||| ||||||||| ||| | ||||||||    
T  17514769 taggcttaaatgcgtttttggtcccttaactatttatttggtaccactttggtc 17514716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 32305330 - 32305277
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  ||| ||||||||||| ||||||||| ||||| ||||||||    
T  32305330 taggcttaaatgtgtttttggtcccttaactatttatttggtatcactttggtc 32305277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 34521264 - 34521317
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  34521264 taggctaaattgcatttttggtcccttaattatttaggtagtatcgctttggtc 34521317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 54831853 - 54831906
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  ||  |||||||||| ||||||||| ||||||||||||||    
T  54831853 taggcttaaatgcgctttcggtcccttaactatttatttggtatcgctttggtc 54831906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 13355790 - 13355734
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || |||||| |||| |||||| || ||||||||||||||    
T  13355790 ttttaggcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtc 13355734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 14859172 - 14859120
Alignment:
Q  185 tcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtct 237  Q
    |||||||| ||||| |||||||||||||||||  ||||| |||||||| ||||    
T  14859172 tcccttaaatatttttttagtatcgctttggttccataagtaataaaaagtct 14859120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 20963687 - 20963627
Alignment:
Q  154 tcatttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttg 214  Q
    ||||||| | ||||||||| ||| ||| ||||||||||| |||||| ||||||||| ||||    
T  20963687 tcatttaatataggcttaattgcctttttggtcccttaactatttaattagtatcggtttg 20963627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 29191865 - 29191809
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || |||| |||||||||    
T  29191865 ttttaggcttaaatgctcttttggtcccttaactatttaattggtattgctttggtc 29191809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 41208396 - 41208452
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||| | || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  41208396 ttttaggttaaattgcatttttggtcccttaactatttaagtagtatcgctttggtc 41208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 44712124 - 44712072
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  44712124 aggcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtc 44712072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 45871696 - 45871748
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  45871696 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 45871748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 50819215 - 50819267
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgcttt 213  Q
    |||||||||||| ||||||| ||||||||||| ||||||  ||| ||||||||    
T  50819215 ttttaggcttaattgcatttttggtcccttaactatttacgtagcatcgcttt 50819267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 50856649 - 50856597
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgcttt 213  Q
    |||||||||||| ||||||| ||||||||||| ||||||  ||| ||||||||    
T  50856649 ttttaggcttaattgcatttttggtcccttaactatttacgtagcatcgcttt 50856597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 52254302 - 52254354
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || |||||| |||||||||||||| |||||| |||||||    
T  52254302 aggcttaaatgctcttttggtcctttaagtatttatttggtatcgttttggtc 52254354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 53841411 - 53841359
Alignment:
Q  167 gcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctc 219  Q
    |||||| ||||||| ||||||||||| ||||||  |||||| |||||||||||    
T  53841411 gcttaattgcatttttggtcccttaactatttagctagtattgctttggtctc 53841359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 54108507 - 54108455
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  54108507 aggctaaattgcatttttggtcccttaattatttagctagtatcgctttggtc 54108455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 26331 - 26260
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||   || |||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  26331 aggcttaaatgatcttttggtcccttaagtatttatttagtatcgttttggtcccataagtaataaaaggtc 26260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 25963 - 26029
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||||  || ||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  25963 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccataagtaataaaa 26029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 1983613 - 1983546
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    ||||||||  || |||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  1983613 ttaaatgctcttttggttccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtc 1983546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 17115687 - 17115617
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggt 235  Q
    ||||||||||||  || |||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||    
T  17115687 aggcttaaatgctcttttggtcccttacgtatttatttagtatcgttttggtcccataagtaataaaaggt 17115617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 18508524 - 18508594
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||  || || |||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  18508524 ggcttaaatgctcttttgatcccttaagtatttatttagtatcgctttgatcccataagtaataaaaggtc 18508594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 24042739 - 24042686
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  24042739 taggcttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtc 24042686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 35463932 - 35463857
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||||||||||| |   ||||||||||| ||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  35463932 taggcttaaatgcttacttggtcccttaaatatttatttggtatcgctttggtcccataagtaataaaaagtctgt 35463857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 37192536 - 37192479
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  ||| ||||||||||| ||||||||| ||||||||||||||    
T  37192536 attttaggcttaaatgtgtttttggtcccttaactatttatttggtatcgctttggtc 37192479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 14347401 - 14347452
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||  || ||||||||||||||||||||| ||||||||||||||    
T  14347401 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtc 14347452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 30645785 - 30645734
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||  || ||||||||||||||||||||| ||||||||||||||    
T  30645785 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtc 30645734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 35463560 - 35463635
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    |||||||||||||  || ||||||||||| ||||||||| ||||||||||| || | ||| |||||||| ||||||    
T  35463560 taggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttgatcccttaagtaataaaatgtctgt 35463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 38384864 - 38384919
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||| ||| || |||||||| ||||||||| ||||||||||||||    
T  38384864 tttaggcttaaatgcgtttttgatcccttaactatttatttggtatcgctttggtc 38384919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 39547777 - 39547828
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||    
T  39547777 ggcttaaatgcttttttggtcccttaaatatttatttggtatcgctttggtc 39547828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 19797657 - 19797715
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||   | ||||||||||||||||||||| |||||| |||||||    
T  19797657 tattttaggcttaaatgctcgtttggtcccttaagtatttatttggtatcgttttggtc 19797715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 24041735 - 24041789
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||| ||| || ||||||||||||||||||  |||||||||||||    
T  24041735 ttaggcttaaatgcgtttttgatcccttaagtatttatttgatatcgctttggtc 24041789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 5187189 - 5187128
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  5187189 attttttttaggcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtc 5187128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 14662379 - 14662432
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggt 235  Q
    ||||||||||||||||||||| | |||||||||||| | ||| |||||||||||    
T  14662379 tggtcccttaagtatttatttggcatcgctttggtcccttaagtaataaaaggt 14662432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 19798780 - 19798727
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||||||||||||| ||||| ||||||||    
T  19798780 taggcttaaatgctcttttggtcccttaagtatttatttggtatcactttggtc 19798727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 28905517 - 28905464
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||   || ||||||||||||||||||||| ||||||||||||||    
T  28905517 taggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtc 28905464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 28941912 - 28941859
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||   || ||||||||||||||||||||| ||||||||||||||    
T  28941912 taggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtc 28941859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 35774251 - 35774174
Alignment:
Q  156 atttatttta-ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||| ||||||||||| ||| ||||||||||| |||||| || ||||| |||||||||| ||| ||| ||||    
T  35774251 atttattttaaggcttaaatgcttttttggtcccttaactatttaattggtatcactttggtctcttaactaaaaaaa 35774174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 38385865 - 38385808
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||||||  || ||||||||||| |||||||||  |||||||||||||    
T  38385865 attttaggcttaaatgcgcttttggtcccttaactatttatttgatatcgctttggtc 38385808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 39548660 - 39548607
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||||||||||||| |||||| |||||||    
T  39548660 taggcttaaatgctcttttggtcccttaagtatttattttgtatcgttttggtc 39548607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 435549 - 435605
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  435549 ttttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 435605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 14233154 - 14233086
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||||||||  || ||||| |||||||||||| || |||||||||||||||| ||| ||| ||||    
T  14233154 taggcttaaatgctattttggtctcttaagtatttaattggtatcgctttggtctcttaactaaaaaaa 14233086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 17339794 - 17339846
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  17339794 aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 17339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 35263485 - 35263545
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| ||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  35263485 tttatattaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 35263545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 5152985 - 5152950
Alignment:
Q  182 tggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5152985 tggtcccttaactatttatttagtatcgctttggtc 5152950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 13823700 - 13823751
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| || |||||||||||||||||| |||| |||||||||    
T  13823700 ggcttaaatgcgtttttgatcccttaagtatttatttggtattgctttggtc 13823751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 18508867 - 18508816
Alignment:
Q  188 cttaagtatttatttagtatcgctttggtctcataaataataaaaggtctgt 239  Q
    ||||| ||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  18508867 cttaaatatttatttggtatcgatttggtcccataaataataaaaagtctgt 18508816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 4077480 - 4077422
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||  || ||||||| ||| |||||| || ||||||||||||||    
T  4077480 tattttaggcttaaatgctcttttggtcccctaaatatttaattggtatcgctttggtc 4077422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 25586299 - 25586349
Alignment:
Q  167 gcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||| ||| |||||||||||||||||| || |||| |||||||||    
T  25586299 gcttaaatgcttttttggtcccttaagtatttaattggtattgctttggtc 25586349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 4959559 - 4959612
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  4959559 taggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtc 4959612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 7399075 - 7399128
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  7399075 taggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 7399128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16670088 - 16670035
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  16670088 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 16670035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 26888583 - 26888636
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  26888583 taggcttaaatgctcttttggtcccttaactatttaatttgtatcgctttggtc 26888636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 28904629 - 28904678
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttg 214  Q
    ||||||||||||  || ||||||||||||||||||||| |||||| ||||    
T  28904629 aggcttaaatgctcttttggtcccttaagtatttatttggtatcgttttg 28904678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 28941024 - 28941073
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttg 214  Q
    ||||||||||||  || ||||||||||||||||||||| |||||| ||||    
T  28941024 aggcttaaatgctcttttggtcccttaagtatttatttggtatcgttttg 28941073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 29961808 - 29961861
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  29961808 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 29961861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 43197644 - 43197701
Alignment:
Q  171 aaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataat 228  Q
    ||||| |||| ||||||||||| | ||||||| |||||||||| ||||||||| ||||    
T  43197644 aaatgtatttttggtcccttaactgtttatttggtatcgctttagtctcataattaat 43197701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 3722140 - 3722092
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  3722140 ttaaatgcttttttggtcccttaaatatttaattggtatcgctttggtc 3722092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 8418578 - 8418519
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||| || || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  8418578 tttattttag-ctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 8418519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 9050505 - 9050445
Alignment:
Q  156 atttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggt 216  Q
    |||||||| |||||||||| |  || || ||||||||||||||| || |||||||||||||    
T  9050505 atttatttaaggcttaaattctcttttgttcccttaagtatttaattggtatcgctttggt 9050445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 13824705 - 13824653
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||| ||||  ||| |||||||||||||||||| || ||||||||||||||    
T  13824705 aggcttgaatgtgtttttggtcccttaagtatttaattggtatcgctttggtc 13824653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 19204935 - 19204995
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| ||||||| || ||||||| ||||||||||| ||||||  ||||||| ||||||||    
T  19204935 tttatcttaggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtc 19204995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 24100759 - 24100707
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  24100759 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 24100707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 25333247 - 25333195
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  25333247 aggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtc 25333195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 36752289 - 36752241
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctt 212  Q
    |||||| || ||||||| ||||||||||| ||||||| |||||||||||    
T  36752289 taggctaaattgcatttttggtcccttaactatttatgtagtatcgctt 36752241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 38312320 - 38312376
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  38312320 tttttggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 38312376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 959006 - 959079
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggtc 236  Q
    |||||||||||||   || | |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  959006 ttaggcttaaatgttctttttgtcccttaagtatttatttagtatcgctttagtcccataagtaataaaaggtc 959079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 959375 - 959306
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaaggt 235  Q
    |||||||||||  || ||||||||||||||||||||| | |||||||||||| ||||| |||||||||||    
T  959375 ggcttaaatgctcttttggtcccttaagtatttatttgggatcgctttggtcccataagtaataaaaggt 959306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 12587913 - 12587845
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  12587913 taggcttaaatgcttttttgcccccttaagtatttatttagtatcgctttggtctcttaactaaaaaaa 12587845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 13839935 - 13839875
Alignment:
Q  157 tttattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||||||||| || ||||||||||| |||||| || ||||||||||||||    
T  13839935 tttattttaggcttaaatgcacttttggtcccttaaatatttaattggtatcgctttggtc 13839875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 901417 - 901469
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  901417 aggcttaaatgcgtttttggtcctttaagtatttatttggtatcgctttggtc 901469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 12261550 - 12261497
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||    
T  12261550 taggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtc 12261497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 28865594 - 28865665
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    ||||||||||||||||  || |||||| |||| ||||||||| |||||| ||||||||| ||| ||| ||||    
T  28865594 ttttaggcttaaatgctattttggtcctttaaatatttatttggtatcgttttggtctcttaactaaaaaaa 28865665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 26392906 - 26392852
Alignment:
Q  163 ttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  26392906 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 26392852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 8850215 - 8850268
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||  || ||||||||||| ||||||||||||||| ||||||||    
T  8850215 taggtttaaatgcgcttttggtcccttaactatttatttagtatcactttggtc 8850268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 27128838 - 27128895
Alignment:
Q  160 attttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| |||||||||||  || ||||||||||| ||||||||| ||||| ||||||||    
T  27128838 atttttggcttaaatgcgcttttggtcccttaactatttatttggtatcactttggtc 27128895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 3288929 - 3288981
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  3288929 aggctaaattgcatttatggtcccttaactatttaggtagtatcgctttggtc 3288981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 3618776 - 3618832
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| ||||||||||| ||| | ||||||||| |||||| || ||||||||||||||    
T  3618776 tttttggcttaaatgcttttttagtcccttaactatttaattggtatcgctttggtc 3618832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 17245711 - 17245659
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||| || ||||||| ||||||||||| |||||| ||||||||| |||||||    
T  17245711 aggctaaattgcatttttggtcccttaattatttaattagtatcggtttggtc 17245659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 17383734 - 17383786
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  17383734 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 17383786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 22498830 - 22498774
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||| |||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  22498830 tttttggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 22498774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 24548236 - 24548288
Alignment:
Q  161 ttttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgcttt 213  Q
    |||| |||| || ||||||| ||||||||||| |||||| |||||||||||||    
T  24548236 ttttgggctaaattgcatttttggtcccttaactatttaattagtatcgcttt 24548288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 28866479 - 28866427
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||| ||||| ||||||||| ||||||||||||||    
T  28866479 aggcttaaatgctcttttggtctcttaaatatttatttggtatcgctttggtc 28866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 31739974 - 31739922
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  31739974 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 31739922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 14761 - 14710
Alignment:
Q  166 ggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  14761 ggcttaaatgcgtttttggtcccttaagtatttatttgatatcgctttggtc 14710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 230871 - 230923
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||    
T  230871 aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtc 230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 4708 - 4653
Alignment:
Q  162 tttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  4708 tttaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtc 4653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 273 - 200
Alignment:
Q  159 tattttaggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtctcataaataataaaa 232  Q
    |||||||| |||||||||  || ||||||||||| |||||| || || ||||||||||| | ||| ||||||||    
T  273 tattttagacttaaatgctcttttggtcccttaactatttaattggtctcgctttggtcccttaactaataaaa 200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 1473 - 1526
Alignment:
Q  164 taggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    |||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  1473 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 83445 - 83393
Alignment:
Q  165 aggcttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||||||  || ||||||||||| |||||| || ||||||||||||||    
T  83445 aggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtc 83393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 300082 - 300130
Alignment:
Q  169 ttaaatgcatttgtggtcccttaagtatttatttagtatcgctttggtc 217  Q
    ||||||||  || |||||||||||||||||| || ||||||||||||||    
T  300082 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtc 300130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University