View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12605_low_6 (Length: 356)

Name: NF12605_low_6
Description: NF12605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12605_low_6
NF12605_low_6
[»] chr7 (24 HSPs)
chr7 (98-205)||(48705644-48705750)
chr7 (107-192)||(33474361-33474445)
chr7 (1-62)||(48646057-48646118)
chr7 (1-62)||(44333147-44333208)
chr7 (2-62)||(35727707-35727767)
chr7 (1-60)||(10899127-10899186)
chr7 (1-58)||(8374926-8374983)
chr7 (1-62)||(21062825-21062886)
chr7 (1-62)||(43457465-43457526)
chr7 (1-62)||(7258283-7258344)
chr7 (2-62)||(12223754-12223814)
chr7 (1-62)||(8375637-8375698)
chr7 (1-62)||(45583692-45583753)
chr7 (1-62)||(46286511-46286572)
chr7 (1-62)||(48647497-48647558)
chr7 (1-62)||(48777264-48777325)
chr7 (2-62)||(44334504-44334564)
chr7 (2-62)||(48788727-48788787)
chr7 (1-62)||(5930186-5930247)
chr7 (1-62)||(30925062-30925123)
chr7 (1-62)||(34704917-34704978)
chr7 (1-62)||(35729140-35729201)
chr7 (1-54)||(42477397-42477450)
chr7 (71-143)||(5082481-5082552)
[»] chr3 (34 HSPs)
chr3 (97-209)||(21814202-21814312)
chr3 (109-209)||(15502622-15502721)
chr3 (110-209)||(41998907-41999005)
chr3 (113-191)||(1165784-1165861)
chr3 (109-191)||(15005830-15005911)
chr3 (97-194)||(3084012-3084107)
chr3 (110-209)||(34060751-34060850)
chr3 (1-62)||(52318371-52318432)
chr3 (1-62)||(2591635-2591696)
chr3 (1-62)||(2592061-2592122)
chr3 (1-62)||(33428489-33428550)
chr3 (1-62)||(45600992-45601053)
chr3 (1-62)||(48572993-48573054)
chr3 (1-61)||(19331117-19331177)
chr3 (1-62)||(17700526-17700587)
chr3 (1-62)||(19114541-19114602)
chr3 (1-62)||(55388081-55388142)
chr3 (2-62)||(50753825-50753885)
chr3 (3-62)||(47118107-47118166)
chr3 (109-191)||(21195283-21195364)
chr3 (4-62)||(47428614-47428672)
chr3 (1-38)||(11773105-11773142)
chr3 (1-62)||(17701973-17702034)
chr3 (1-62)||(19115200-19115261)
chr3 (1-62)||(34263813-34263874)
chr3 (1-62)||(36278960-36279021)
chr3 (1-61)||(20464078-20464138)
chr3 (112-179)||(54143822-54143889)
chr3 (114-168)||(22455369-22455423)
chr3 (107-156)||(28954253-28954302)
chr3 (1-62)||(52316987-52317048)
chr3 (1-62)||(55389523-55389584)
chr3 (1-45)||(47427885-47427929)
chr3 (1-33)||(49261588-49261620)
[»] scaffold0045 (2 HSPs)
scaffold0045 (109-190)||(62583-62663)
scaffold0045 (109-190)||(69915-69995)
[»] chr8 (20 HSPs)
chr8 (98-191)||(43819551-43819643)
chr8 (71-189)||(7207194-7207310)
chr8 (107-209)||(24066973-24067074)
chr8 (115-209)||(617525-617617)
chr8 (115-209)||(623918-624010)
chr8 (107-209)||(42542994-42543095)
chr8 (1-62)||(32898499-32898560)
chr8 (2-62)||(41754006-41754066)
chr8 (122-209)||(589913-589998)
chr8 (1-43)||(41754849-41754891)
chr8 (1-62)||(35178858-35178919)
chr8 (99-145)||(12221022-12221068)
chr8 (1-54)||(28005359-28005412)
chr8 (1-54)||(28062662-28062715)
chr8 (1-58)||(35177407-35177464)
chr8 (109-209)||(27737704-27737803)
chr8 (8-72)||(59548-59614)
chr8 (109-148)||(8210174-8210213)
chr8 (110-156)||(4308834-4308880)
chr8 (1-62)||(30134574-30134635)
[»] chr1 (23 HSPs)
chr1 (107-191)||(51046645-51046728)
chr1 (109-178)||(32268033-32268102)
chr1 (97-189)||(13925101-13925191)
chr1 (115-192)||(1107386-1107462)
chr1 (1-58)||(5782426-5782483)
chr1 (1-54)||(7945608-7945661)
chr1 (2-62)||(10332994-10333054)
chr1 (115-209)||(39421026-39421126)
chr1 (1-62)||(32665824-32665885)
chr1 (97-145)||(12173173-12173221)
chr1 (1-59)||(9339657-9339715)
chr1 (71-145)||(46289632-46289705)
chr1 (117-177)||(3894800-3894861)
chr1 (1-62)||(52439487-52439548)
chr1 (2-50)||(52440614-52440662)
chr1 (1-56)||(7944169-7944224)
chr1 (142-209)||(46289579-46289645)
chr1 (1-43)||(5783163-5783205)
chr1 (109-155)||(27210749-27210795)
chr1 (110-172)||(41898878-41898940)
chr1 (1-62)||(6612427-6612488)
chr1 (1-62)||(22856688-22856749)
chr1 (2-62)||(8975167-8975227)
[»] chr6 (8 HSPs)
chr6 (97-209)||(1947417-1947528)
chr6 (98-209)||(16441775-16441885)
chr6 (115-178)||(19646027-19646090)
chr6 (1-62)||(30748007-30748068)
chr6 (1-62)||(31218963-31219024)
chr6 (1-62)||(31219214-31219275)
chr6 (115-178)||(5138503-5138565)
chr6 (115-209)||(27127493-27127586)
[»] scaffold0169 (1 HSPs)
scaffold0169 (109-177)||(9025-9093)
[»] chr4 (18 HSPs)
chr4 (97-192)||(4867772-4867866)
chr4 (107-192)||(45674164-45674248)
chr4 (1-62)||(31844730-31844791)
chr4 (1-62)||(53771103-53771164)
chr4 (107-164)||(45683989-45684046)
chr4 (1-62)||(47878538-47878599)
chr4 (1-73)||(42391942-42392016)
chr4 (1-73)||(47874559-47874633)
chr4 (1-62)||(42278057-42278118)
chr4 (1-62)||(53770341-53770402)
chr4 (18-58)||(26685488-26685528)
chr4 (1-60)||(39868932-39868991)
chr4 (123-209)||(29722067-29722152)
chr4 (71-145)||(35911151-35911224)
chr4 (1-43)||(54574452-54574494)
chr4 (1-62)||(4703271-4703332)
chr4 (109-190)||(45257608-45257688)
chr4 (1-62)||(48740074-48740135)
[»] chr2 (23 HSPs)
chr2 (107-178)||(7888572-7888643)
chr2 (115-191)||(10824259-10824334)
chr2 (1-62)||(31091581-31091642)
chr2 (1-62)||(32766293-32766354)
chr2 (1-62)||(39015013-39015074)
chr2 (117-209)||(803889-803980)
chr2 (1-62)||(24459500-24459561)
chr2 (1-62)||(40000388-40000449)
chr2 (1-62)||(2910108-2910169)
chr2 (2-58)||(31090176-31090232)
chr2 (107-153)||(445602-445648)
chr2 (1-59)||(17330284-17330342)
chr2 (1-62)||(24458068-24458129)
chr2 (107-191)||(6975837-6975919)
chr2 (4-73)||(14887555-14887626)
chr2 (1-39)||(15442025-15442063)
chr2 (110-156)||(33726405-33726451)
chr2 (110-155)||(2239607-2239652)
chr2 (1-62)||(5915046-5915107)
chr2 (1-62)||(32764946-32765007)
chr2 (1-62)||(34037727-34037788)
chr2 (1-49)||(17466882-17466930)
chr2 (1-62)||(39016433-39016496)
[»] scaffold0209 (1 HSPs)
scaffold0209 (115-209)||(29349-29441)
[»] chr5 (20 HSPs)
chr5 (1-62)||(13651174-13651234)
chr5 (1-62)||(28591168-28591229)
chr5 (2-62)||(18400198-18400258)
chr5 (1-62)||(8074459-8074520)
chr5 (1-62)||(546090-546150)
chr5 (1-62)||(9538103-9538164)
chr5 (1-62)||(21069297-21069358)
chr5 (1-62)||(40612713-40612774)
chr5 (1-49)||(19182971-19183019)
chr5 (1-60)||(9537033-9537092)
chr5 (3-62)||(14891199-14891258)
chr5 (107-174)||(28782706-28782773)
chr5 (1-62)||(4592869-4592930)
chr5 (1-62)||(16611736-16611797)
chr5 (1-50)||(25590451-25590499)
chr5 (122-178)||(10317259-10317315)
chr5 (1-62)||(2464677-2464738)
chr5 (25-62)||(24900410-24900447)
chr5 (2-62)||(2466829-2466889)
chr5 (1-49)||(8075887-8075935)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-62)||(116063-116124)
[»] scaffold0039 (2 HSPs)
scaffold0039 (2-58)||(79085-79141)
scaffold0039 (1-58)||(74367-74424)


Alignment Details
Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 48705644 - 48705750
Alignment:
Q  98 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaa 197  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||| | ||    
T  48705644 gaaattacaactttttaacttttagaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaacaatgccccaa 48705742  T
Q  198 ggacactc 205  Q
    || |||||    
T  48705743 ggccactc 48705750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 33474361 - 33474445
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 192  Q
    ||||||| |||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  33474361 actttttgacttttagaaagttgaattcaacacttttcataatttttcaacaaattatttctatttttgtt-ctcttaaccaatgc 33474445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48646118 - 48646057
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  48646118 gtatttaatcctgagtcagggacctatgtgacagcgaggtgcatagtcagggaccaaagtga 48646057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44333208 - 44333147
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  44333208 gtatttaatcatgagtcagggacctatgtgacagcgaggtgcagagtcagggaccaaagtga 44333147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 35727767 - 35727707
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |||||||    
T  35727767 tatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaaagtga 35727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10899127 - 10899186
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 60  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||||    
T  10899127 gtatttaatcctgggtcaaggatctatgtgacagcgaggtgcagagtcagggaccaaagt 10899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8374983 - 8374926
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    ||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||    
T  8374983 gtatttaattctgagtcagagacctatgtgacagcgaggtgcagagtcagggactaaa 8374926  T

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Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21062886 - 21062825
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||| ||| || | ||||||||||||||| ||||||||||||||||||    
T  21062886 gtatttaatcctgagtcaaggacctttatgacagcgaggtgcaaagtcagggactaaagtga 21062825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43457526 - 43457465
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| ||||| ||||||||| |||| | ||||||||||||||||    
T  43457526 gtatttaatcctgagtcagggacctatgcgacagcgagctgcagaatcagggactaaagtga 43457465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7258344 - 7258283
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||| ||||| |||||||||| ||||||| | |||||||||| |||||||    
T  7258344 gtatttaatcctgagttagggacctatgtgacaacgaggtgtagagtcagggaccaaagtga 7258283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 12223754 - 12223814
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||||| ||||||||||  || |||||  |||||||||||||||||    
T  12223754 tatttaatcctgagtcagggacctatgtgacattgatgtgcagtgtcagggactaaagtga 12223814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8375637 - 8375698
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| ||||||||||| ||||||||||| | |||||  ||||||||||||| ||||    
T  8375637 gtatttaatcatgagtcagggacctatgtgacagtgcggtgcgaagtcagggactaatgtga 8375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45583753 - 45583692
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| |||||||||||| |||||||| |||||  |||| | ||||||||||||||||    
T  45583753 gtatttaattctgagtcagggacctatgtgatagcgaactgcagaatcagggactaaagtga 45583692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46286572 - 46286511
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| || | | |||||||| || | ||||||||||||||||||    
T  46286572 gtatttaatcctgagtcagggacctttctaacagcgagatgaagagtcagggactaaagtga 46286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48647497 - 48647558
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||| |||||| || | | |||||| |||||||||    
T  48647497 gtatttaatcctgagtcagggacctatgtgatagcgagctgtagaatcagggtctaaagtga 48647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48777325 - 48777264
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| |||||||||||  |||||||||||||| |||| | |||| |||||||||||    
T  48777325 gtatttaatcatgagtcagggacttatgtgacagcgagctgcagaatcagagactaaagtga 48777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 44334504 - 44334564
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| ||||||||||| |||||| |||||||| |||| | ||||| ||||||||||    
T  44334504 tatttaatcatgagtcagggacctatgtaacagcgagctgcagaatcaggaactaaagtga 44334564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 48788727 - 48788787
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||  ||||||||||| |||||||||||||||||||| ||||| |||  |||||||    
T  48788727 tatttaattatgagtcagggacctatgtgacagcgaggtgcaaagtcaaggatcaaagtga 48788787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5930186 - 5930247
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||| ||||| || ||||| ||||| ||||| ||| || |||||||||||    
T  5930186 gtatttaatcctgagttagggacctttgtgatagcgaagtgcaaagtaagagactaaagtga 5930247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30925062 - 30925123
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||| ||| ||||||||| | ||| |||| | ||||||| ||||||||    
T  30925062 gtatttaatcctgagtcaaggacctatgtgactgggagctgcagaatcagggattaaagtga 30925123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34704978 - 34704917
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| |  || ||||||| ||||||||| |||| | |||||||||||    
T  34704978 gtatttaatcctgagtcagaggcctttgtgacaacgaggtgcagagtcggagactaaagtga 34704917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35729140 - 35729201
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||| ||||||| ||||| ||| ||||||||||||||| |||| | ||||||| ||||||||    
T  35729140 gtatgtaatcctaagtcaaggacctatgtgacagcgagctgcaaaatcagggaataaagtga 35729201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42477450 - 42477397
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 54  Q
    ||||||||||||||||||| || ||||| |||| ||||||||| ||||| ||||    
T  42477450 gtatttaatcctgagtcagagacctatgcgacaacgaggtgcagagtcaaggac 42477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 5082481 - 5082552
Alignment:
Q  71 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacattttt 143  Q
    |||||||||||| || |||||||   ||||||||  ||||||| ||||||| |||||||||||||||| ||||    
T  5082481 aaactaaaagtagtagttttgcatt-ggaaattacaactttttgacttttaaaaagttgaattcaacactttt 5082552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 21814202 - 21814312
Alignment:
Q  97 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaa 196  Q
    ||||||||| ||||||| ||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||  ||||||||||||| |||    
T  21814202 ggaaattataactttttgacttttagaaaattgaattcaacacttttcaccacttttcaacaaattatttctatttatgtt-atcttaaccaatgcccaa 21814300  T
Q  197 aggacactcttta 209  Q
    | |||||||||||    
T  21814301 a-gacactcttta 21814312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 15502721 - 15502622
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttt 208  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    |||||||||||||    
T  15502721 tttttaacttttaaaaagttgaattcaacattttttaccatttttcaacaaattatttctatttttgtt-ctcttaaccaatgtctcaaggacactcttt 15502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 41998907 - 41999005
Alignment:
Q  110 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||  | |||| |||||||||    
T  41998907 tttttacttttataaagttgaatttaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaccaatgtcccaagggcactcttta 41999005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 1165784 - 1165861
Alignment:
Q  113 taacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||| |||||||||    
T  1165784 taacttttagaaagttgaattcaacatttttcatcacttttcaacaaattatttctatttatgtt-ctcataaccaatg 1165861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 15005830 - 15005911
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| | ||||||||||| |||||||| |||||||||||||    
T  15005830 tttttaacttttacaaagttgaattcaacactttttaccatttttccataaattatttctgtttatgtt-ctcttaaccaatg 15005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 3084012 - 3084107
Alignment:
Q  97 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcac 194  Q
    ||||||||  ||||||||| |||||||||||| || |||||| |||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  3084012 ggaaattacaactttttaa-ttttagaaagttaaactcaacactttttaccatttttcaacaaattatatctatttatgtt-ctcttaaccaatgcac 3084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 34060850 - 34060751
Alignment:
Q  110 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    |||||||||||| |||||| |||||| || ||||||||||||||||| | | ||||| ||||| |  || ||||||||||||||| ||||||||||||||    
T  34060850 ttttaacttttaaaaagttaaattcatcacttttcaccatttttcaatacaatatttttattttttatcttcttaaccaatgcaccaaggacactcttta 34060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52318371 - 52318432
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||    
T  52318371 gtatttaatcctgagtcagggatctatgtgacagcgaagtgcagagtcagagaccaaagtga 52318432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2591696 - 2591635
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||||| || |||| | ||||||||||||||||    
T  2591696 gtatttaatcctgagtcagggacctatgtgacagcaagctgcagaatcagggactaaagtga 2591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2592061 - 2592122
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| ||||||||||||||| |||| | | ||||||||||||||    
T  2592061 gtatttaatcctgagtcagggacctatgtgacagcgagctgcagaattagggactaaagtga 2592122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33428489 - 33428550
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| |||||||||||| |||||||||| ||||||||| |||||||||| |||||||    
T  33428489 gtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggacgaaagtga 33428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45600992 - 45601053
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||| ||||||| ||||||||||||||||  || ||||||||||||||||||    
T  45600992 gtatttaatcctgaatcagggacctatgtgacagcgagggacagagtcagggactaaagtga 45601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48573054 - 48572993
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||| | ||||||||| |||||||||| |||||||    
T  48573054 gtatttaatcctgagtcagggacctatgtgataacgaggtgcagagtcagggaccaaagtga 48572993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19331177 - 19331117
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 61  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||| || ||||||    
T  19331177 gtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtcaggaacgaaagtg 19331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17700587 - 17700526
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||| | |||||||||| ||||||||| |||||  |||||||||||    
T  17700587 gtatttaatcctgagtcaggaacctatgtgacaacgaggtgcagagtcaaagactaaagtga 17700526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19114602 - 19114541
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| ||||||||||| || ||||||| ||| ||||| ||||||||||||||||||    
T  19114602 gtatttaatcttgagtcagggacctctgtgacaacgaagtgcagagtcagggactaaagtga 19114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 55388142 - 55388081
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| || |||| |||||||||| |||| | ||||||||||||||||    
T  55388142 gtatttaatcctgagtcagagacctatatgacagcgagctgcagaatcagggactaaagtga 55388081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 50753885 - 50753825
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||| | ||||| |||||||||||||||||||| ||  ||||||||||||||    
T  50753885 tatttaatcctgaattagggacctatgtgacagcgaggtgcagagctagggactaaagtga 50753825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 47118107 - 47118166
Alignment:
Q  3 atttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||| ||||  ||| ||||| ||||||||| ||||||||||||||||||    
T  47118107 atttaatcctgagtcggggacttatatgacaacgaggtgcagagtcagggactaaagtga 47118166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 21195364 - 21195283
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    ||||||||||||| ||||||||||||| || |||||| || ||| ||| ||  ||||||||||| ||||||| ||||||||||    
T  21195364 tttttaacttttaaaaagttgaattcaccacttttcatcactttccaacaagatatttctatttttgttcct-ttaaccaatg 21195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 47428614 - 47428672
Alignment:
Q  4 tttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||| ||||||| ||| ||||||||||| |||||||| ||||||||| ||||||||    
T  47428614 tttaatcttgagtcacggacctatgtgacagagaggtgcaaagtcagggattaaagtga 47428672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11773105 - 11773142
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgag 38  Q
    |||||||||||||||||||||| |||||||||||||||    
T  11773105 gtatttaatcctgagtcagggacctatgtgacagcgag 11773142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17701973 - 17702034
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| ||||||||||| |||| |||||||||| |||| | |||| |||||||||||    
T  17701973 gtatttaatcttgagtcagggacctatatgacagcgagctgcagaatcagagactaaagtga 17702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19115200 - 19115261
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||| | ||| |||||||||| ||||||||| ||||| | ||||||||||    
T  19115200 gtatttaatcctgagtgaaggacctatgtgacatcgaggtgcagagtcacgaactaaagtga 19115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34263874 - 34263813
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||| ||| ||| || ||||||||||||||||| |||||||| | |||||||    
T  34263874 gtatttaatcctgaatcaaggacctctgtgacagcgaggtgcagagtcaggggccaaagtga 34263813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36279021 - 36278960
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||| ||||||| |||||||||| |||| || | | ||||||||||||||||    
T  36279021 gtatttaatcctgaatcagggacctatgtgacaacgagctgtataatcagggactaaagtga 36278960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20464138 - 20464078
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 61  Q
    |||||||||| |||| |||||| || ||||||| ||||||||| |||| ||||||||||||    
T  20464138 gtatttaatcatgagccagggacctttgtgacaacgaggtgcagagtcggggactaaagtg 20464078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 54143889 - 54143822
Alignment:
Q  112 ttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcc 179  Q
    |||||||||| ||||||||||| | ||||||||| || ||||||| ||  ||||||||||| ||||||    
T  54143889 ttaacttttaaaaagttgaatttaccatttttcatcacttttcaataagatatttctatttttgttcc 54143822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 22455423 - 22455369
Alignment:
Q  114 aacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttct 168  Q
    |||||||||||||||||||| || ||||||||||| |||| || | |||||||||    
T  22455423 aacttttagaaagttgaatttaatatttttcaccactttttaatacattatttct 22455369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 28954253 - 28954302
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 156  Q
    |||||| |||||||||| |||||||||||||| ||| |||||||| ||||    
T  28954253 acttttaaacttttagacagttgaattcaacactttccaccatttatcaa 28954302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52317048 - 52316987
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| |||||||| || |||| |||||||||| |||| | |||| |||||||||||    
T  52317048 gtatttaatcatgagtcagagacctatatgacagcgagctgcagaatcagagactaaagtga 52316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 55389523 - 55389584
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||  |||||||  || |||||||||||||||||||| ||| |||||| |||||||    
T  55389523 gtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagttagggaccaaagtga 55389584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47427929 - 47427885
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcaca 45  Q
    |||||||||  ||||||| ||| ||||||||||||||||||||||    
T  47427929 gtatttaattttgagtcaaggacctatgtgacagcgaggtgcaca 47427885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49261588 - 49261620
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgaca 33  Q
    |||||||||||||||||||||| ||||||||||    
T  49261588 gtatttaatcctgagtcagggacctatgtgaca 49261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 62663 - 62583
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 190  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  62663 tttttaacttttagaaagttgaattcaacacttttcaccatttttcaaaaaattatttctatttatgtt-atcttaaccaat 62583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 69995 - 69915
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 190  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  69995 tttttaacttttagaaagttgaattcaacacttttcaccatttttcaaaaaattatttctatttatgtt-atcttaaccaat 69915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 43819551 - 43819643
Alignment:
Q  98 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||    
T  43819551 gaaattacaactttttgacttttagaaagttgaattcaacatttttcatcatttttcaacaaattatttctattcatgtt-ctcttaaccaatg 43819643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 7207194 - 7207310
Alignment:
Q  71 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctat 170  Q
    |||||||||||| ||||||||||   |||| |||  ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |||    
T  7207194 aaactaaaagtagtaattttgcattgggaa-ttacaactttttaacttttagaaatttgaattcaacacttttcatcatttttcaacaaattatttatat 7207292  T
Q  171 ttatgttcctcttaaccaa 189  Q
    ||||||| |||||||||||    
T  7207293 ttatgtt-ctcttaaccaa 7207310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 24066973 - 24067074
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactct 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  ||| ||||||||| ||||||||||  ||||||| ||||| | |||||||||||    
T  24066973 actttttaacttttagaaggttgaattcaacacttttcaccatttcccaacaaattatttatatttatgtt-ttcttaacaaatgccccaaggacactct 24067071  T
Q  207 tta 209  Q
    |||    
T  24067072 tta 24067074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 617525 - 617617
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  617525 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 617617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 623918 - 624010
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  623918 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 624010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 42542994 - 42543095
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactct 206  Q
    ||||||| ||||||||| |||||||||||||| ||||||| |||||| || ||||| ||| ||||||||||| | ||||||||||| | |||| ||||||    
T  42542994 acttttttacttttagagagttgaattcaacacttttcactatttttaaacaaattgtttttatttatgttcat-ttaaccaatgccccaagggcactct 42543092  T
Q  207 tta 209  Q
    |||    
T  42543093 tta 42543095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32898499 - 32898560
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||| ||||||||| ||||||||||| ||| |||| ||||||||||||||||||    
T  32898499 gtatttaatcctaagtcagggacctatgtgacagtgagttgcagagtcagggactaaagtga 32898560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 41754066 - 41754006
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |  |||||||||||||||    
T  41754066 tatttaatcctgagtcagggacctatgtgacagcaaggtgcagaaccagggactaaagtga 41754006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 589998 - 589913
Alignment:
Q  122 gaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    |||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  589998 gaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 589913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41754849 - 41754891
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgca 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  41754849 gtatttaatcctgagtcagagatctatgtgacagcgaggtgca 41754891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35178858 - 35178919
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| | || ||||||||| ||||| |||||||||| |||||||    
T  35178858 gtatttaatcctgagtcagggaccaatatgacagcgatgtgcagagtcagggaccaaagtga 35178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 12221022 - 12221068
Alignment:
Q  99 aaattattactttttaacttttagaaagttgaattcaacatttttca 145  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||    
T  12221022 aaattataacttttaaacttttaaaaagttgaattcaacatttttca 12221068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28005412 - 28005359
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 54  Q
    |||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  28005412 gtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggac 28005359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28062715 - 28062662
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 54  Q
    |||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  28062715 gtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggac 28062662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35177464 - 35177407
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| | | ||||||||||    
T  35177464 gtatttaatccggagtcagggacctatgtgacagcgagctgcagaattagggactaaa 35177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 27737803 - 27737704
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttt 208  Q
    ||||| |||||||||||||| ||||||||| |||| |  |||||| || | |||||||||| ||||||| |||||||| ||||  | || ||||||||||    
T  27737803 tttttgacttttagaaagttaaattcaacacttttaattattttttaacatattatttctaattatgtt-ctcttaactaatgttccaaagacactcttt 27737705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 59614 - 59548
Alignment:
Q  8 atcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaa 72  Q
    |||||||||||||||   | |||||||||||||| | ||||||||||||||||||  ||||||||||    
T  59614 atcctgagtcagggactaaagtgacagcgaggtgtaaagtcagggactaaagtgactatttactcaa 59548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 148
Target Start/End: Original strand, 8210174 - 8210213
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcacca 148  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  8210174 tttttaacttttaaaaagttgaattcatcatttttcacca 8210213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 4308834 - 4308880
Alignment:
Q  110 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 156  Q
    |||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  4308834 ttttaacttttataaagttaaattcatcattttttaccatttttcaa 4308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30134635 - 30134574
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| |||||  |||| || ||||||||||||||||| ||| | ||||||||||||    
T  30134635 gtatttaatcatgagtaggggacctttgtgacagcgaggtgcagagttaaggactaaagtga 30134574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 51046728 - 51046645
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  51046728 actttttgacttttaaaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaccaatg 51046645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 32268033 - 32268102
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 178  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  32268033 tttttgacttttagaaagttgaattcaacacttttcaccatttttcaacaaattatttttatttatgttc 32268102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 13925101 - 13925191
Alignment:
Q  97 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaa 189  Q
    ||||||||  ||||||| ||||||||| ||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  13925101 ggaaattacaactttttgacttttagatagttgaatt-aacacttttcactatttttcaacaaattatttctatttatgtt-ctcttaaccaa 13925191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 1107462 - 1107386
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 192  Q
    |||||||| ||||||||||||||| |||||||| ||| | || ||||||||| |||||||||| ||||||||||||||    
T  1107462 acttttaggaagttgaattcaacacttttcaccgtttattaacaaattatttttatttatgtt-ctcttaaccaatgc 1107386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5782483 - 5782426
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    |||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||    
T  5782483 gtatttaatcatgagtcagagacctatgtgacagcgaggtgcagagtcagggactaaa 5782426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7945608 - 7945661
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 54  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  7945608 gtatttaatcctgagtcaggaacctatgtgacagcgaggtgcagagtcagggac 7945661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 10333054 - 10332994
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||| ||| ||| |||||||||| ||||||||| ||||||||||||||||||    
T  10333054 tatttaatcctgaatcaaggacctatgtgacaacgaggtgcaaagtcagggactaaagtga 10332994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 39421026 - 39421126
Alignment:
Q  115 acttttagaaagttgaattcaacatttttca-------ccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactctt 207  Q
    |||||||||||||||||||||||| ||||||       || |||||||| |||||||||||||||||||| |||||||||||||  | ||||||||| ||    
T  39421026 acttttagaaagttgaattcaacacttttcagtttccaccgtttttcaacaaattatttctatttatgtt-ctcttaaccaatgtcccaaggacactgtt 39421124  T
Q  208 ta 209  Q
    ||    
T  39421125 ta 39421126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32665824 - 32665885
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| |||||||| || ||||||||||||||| |||| | ||||||||||||||||    
T  32665824 gtatttaatcatgagtcagagacctatgtgacagcgagctgcagaatcagggactaaagtga 32665885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 12173221 - 12173173
Alignment:
Q  97 ggaaattattactttttaacttttagaaagttgaattcaacatttttca 145  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  12173221 ggaaattataactttttgacttttacaaagttgaattcaacatttttca 12173173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9339715 - 9339657
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 59  Q
    |||||||||||||||||||||| |||||| ||| |||| |||| | |||||||||||||    
T  9339715 gtatttaatcctgagtcagggacctatgtaacaacgagctgcagaatcagggactaaag 9339657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 46289705 - 46289632
Alignment:
Q  71 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttca 145  Q
    |||||||||||| || |||||||   ||||||||  ||||||||||||||| ||||| |||||||||||||||||    
T  46289705 aaactaaaagtagtagttttgcatt-ggaaattacaactttttaacttttaaaaagtcgaattcaacatttttca 46289632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 3894800 - 3894861
Alignment:
Q  117 ttttagaaagttgaattcaacatttttcaccatttttc-aagaaattatttctatttatgtt 177  Q
    ||||| |||| | ||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  3894800 ttttaaaaagctaaattcaacatttttcactatttttctaacaaattatttctatttatgtt 3894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52439548 - 52439487
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||| ||| || ||||||||||||||| |||| | |||||| |||||||||    
T  52439548 gtatttaatcctgagccagagacctatgtgacagcgagctgcagaatcaggggctaaagtga 52439487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 52440614 - 52440662
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 50  Q
    ||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  52440614 tatttaatcctgactcagggacctatgtgacagcgatgtgcaaagtcag 52440662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7944224 - 7944169
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 56  Q
    |||||||||  ||||||||||| ||||||||||||||| |||| | ||||||||||    
T  7944224 gtatttaattttgagtcagggacctatgtgacagcgagttgcaaaatcagggacta 7944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 46289645 - 46289579
Alignment:
Q  142 ttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    |||| |||||||||| ||||||||||||||||| || || ||||||||||| | || |||||||||||    
T  46289645 ttcaacatttttcaacaaattatttctatttatatt-cttttaaccaatgccctaaagacactcttta 46289579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5783163 - 5783205
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgca 43  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  5783163 gtatttaattctgagtcgaggatctatgtgacagcgaggtgca 5783205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 27210749 - 27210795
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttca 155  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||||    
T  27210749 tttttaacttttaaaaagttaaattgatcatttttcaccatttttca 27210795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 41898940 - 41898878
Alignment:
Q  110 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctattt 172  Q
    |||||||||||| |||||| |||||| || |||| |||||||||||| | | |||||||||||    
T  41898940 ttttaacttttaaaaagttaaattcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6612488 - 6612427
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| |||||||| ||  | | | ||||||||||||| ||||||||||||||||||    
T  6612488 gtatttaatcatgagtcagagacatttataacagcgaggtgcagagtcagggactaaagtga 6612427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22856749 - 22856688
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||| | |||| ||| ||| || |||||| |||||| |||||||||||    
T  22856749 gtatttaatcctgagtcaagaatctttgtaacaacgtggtgcagagtcagtgactaaagtga 22856688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 8975227 - 8975167
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| ||||||||||| || ||||||| | ||||||| ||| |||||| |||||||    
T  8975227 tatttaatcttgagtcagggacctttgtgacaacaaggtgcaaagttagggaccaaagtga 8975167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 1947417 - 1947528
Alignment:
Q  97 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaa 196  Q
    ||||||||  ||||||| ||||||||||||||||||| |||| |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||   |    
T  1947417 ggaaattacaactttttgacttttagaaagttgaatttaacactttttaccattttccaacaaattatttctatttatgtt-ctcttaaccaatgcctca 1947515  T
Q  197 aggacactcttta 209  Q
    || ||||||||||    
T  1947516 agaacactcttta 1947528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 16441885 - 16441775
Alignment:
Q  98 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaa 197  Q
    |||||||  ||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||| || || ||||||||||  ||||    
T  16441885 gaaattacaacttttttacttttagaaatttgaattcaacatttttcaccacttttcaacaaattatttatatttatatt-cttttaaccaatgtccaaa 16441787  T
Q  198 ggacactcttta 209  Q
    | ||||||||||    
T  16441786 gaacactcttta 16441775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 19646027 - 19646090
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 178  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  19646027 acttttaaaaagttgaattcaacacttttcaccatttttcaacaaattttttctatttatgttc 19646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30748068 - 30748007
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  30748068 gtatttaatcctaagtcagggacctatgtgacagcgaggtgcagaatcagggactaaagtga 30748007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31219024 - 31218963
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||| | ||| |||||||||||||||||||| |||||| || ||||||||    
T  31219024 gtatttaatcctgagttaaggacctatgtgacagcgaggtgcagagtcagagattaaagtga 31218963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31219214 - 31219275
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||| |  || |||||||||||||||||||| ||||||||| ||||||||    
T  31219214 gtatttaatcctgagttaatgacctatgtgacagcgaggtgcagagtcagggattaaagtga 31219275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 5138503 - 5138565
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 178  Q
    ||||||||||| |||||||||||||||||||  |||||| || ||| ||||| |||||||||||    
T  5138503 acttttagaaatttgaattcaacatttttca-tattttttaataaaatatttgtatttatgttc 5138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 27127586 - 27127493
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    ||||||| |||||| |||||| ||||||||||||||| |||| | | ||||||||||| |  || |||||| |||||||  | ||||||||||||    
T  27127586 acttttaaaaagttaaattcatcatttttcaccatttctcaatacaatatttctattt-ttatcatcttaaacaatgcatcatggacactcttta 27127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 9093 - 9025
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgtt 177  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9093 tttttgacttttaaaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt 9025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 4867866 - 4867772
Alignment:
Q  97 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 192  Q
    ||||||||  ||||||| ||||||| ||| |||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||    
T  4867866 ggaaattacaactttttgacttttaaaaatttgaattcaacacttttcaccacttttcaacaaattatttttatttatgtt-ctcttaaccaatgc 4867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 45674248 - 45674164
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 192  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||| |||||||||| || || |||||||||||    
T  45674248 actttttaactttaagaaagttgaattcaacacttttcactatttttcaacaaattaattctatttat-tttcttttaaccaatgc 45674164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31844791 - 31844730
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  31844791 gtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagctagggactaaagtga 31844730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53771103 - 53771164
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  53771103 gtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggactaaagtga 53771164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 45683989 - 45684046
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattat 164  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| ||||||| |||||||    
T  45683989 actttttaacttttataaatttgaattcaacacttttcaccacttttcaacaaattat 45684046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47878538 - 47878599
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||  |||||||    
T  47878538 gtatttaatccagagtcagggacctatgtaacagcgaggtgcagagtcagggatcaaagtga 47878599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42391942 - 42392016
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 73  Q
    |||||||||| |||||||| || ||||||||||| |||||||  |||||| |||||||||||  |||||||||||    
T  42391942 gtatttaatcatgagtcagagacctatgtgacagtgaggtgcggagtcagagactaaagtgatcatttactcaaa 42392016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47874633 - 47874559
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 73  Q
    |||||||||| ||||||||||| |||||||| |||||| |||| | |||| |||||||||||  |||||||||||    
T  47874633 gtatttaatcttgagtcagggacctatgtgatagcgagctgcagaatcagagactaaagtgactatttactcaaa 47874559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42278118 - 42278057
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||| |||||||||| |||||||||||| || |||| | ||| ||||||||||||    
T  42278118 gtatttaatcccgagtcagggacctatgtgacagcaagctgcagaatcaaggactaaagtga 42278057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53770402 - 53770341
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| |||||||||| | ||||||||  |||||||||| |||||| |||||||||||    
T  53770402 gtatttaattctgagtcaggaacctatgtgaatgcgaggtgcagagtcagagactaaagtga 53770341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 26685488 - 26685528
Alignment:
Q  18 agggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  26685488 agggacctatgtgacagcgaggtgcagagtcagggactaaa 26685528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39868991 - 39868932
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 60  Q
    |||||||||  ||||||||||| || ||| ||||||||||||| |||||| |||||||||    
T  39868991 gtatttaattatgagtcagggacctttgtaacagcgaggtgcagagtcagagactaaagt 39868932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 29722152 - 29722067
Alignment:
Q  123 aaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    |||||| |||||| ||||||||||||| |||||| | | ||| ||||||| |||||| | |||||||||| | |||| |||||||||    
T  29722152 aaagttaaattcatcatttttcaccatatttcaacacaatatatctatttttgttcc-cctaaccaatgccctaagggcactcttta 29722067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 35911151 - 35911224
Alignment:
Q  71 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttca 145  Q
    |||||||||||| ||||||||||   | ||||||| ||||||| ||||||| ||| |||||||||||| ||||||    
T  35911151 aaactaaaagtagtaattttgcatt-gaaaattataactttttgacttttaaaaatttgaattcaacacttttca 35911224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54574494 - 54574452
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgca 43  Q
    ||||||||||||||||||| || ||||||||||||||| ||||    
T  54574494 gtatttaatcctgagtcagagacctatgtgacagcgagatgca 54574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4703271 - 4703332
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| |||||| ||||| ||||||||||||||| || | ||||||  ||||||||||    
T  4703271 gtatttaattctgagttagggacctatgtgacagcgagatgtagagtcagtaactaaagtga 4703332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 45257688 - 45257608
Alignment:
Q  109 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 190  Q
    |||||| |||||| ||||||||||||| || |||||| || ||  ||| ||| ||||||||||| |||| ||||||||||||    
T  45257688 tttttagcttttaaaaagttgaattcaccacttttcaacacttcccaacaaaatatttctatttttgtt-ctcttaaccaat 45257608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48740074 - 48740135
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||  ||||||||||||||| ||||||  |||||||| || || ||||||||||||    
T  48740074 gtatttaattatgagtcagggatctacgtgacaatgaggtgcagagacatggactaaagtga 48740135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 7888643 - 7888572
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 178  Q
    ||||||| ||||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7888643 acttttttacttttataaaattaaattcaacacttttcaccatttttcaagaaattatttctatttatgttc 7888572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 10824259 - 10824334
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| ||||||||| |||||||||| |||||||||||||    
T  10824259 acttttagaaagttaaattcaacatttttcaccactttccaacaaattatttttatttatgtt-ctcttaaccaatg 10824334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31091581 - 31091642
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||    
T  31091581 gtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtcagggaccaaagtga 31091642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32766293 - 32766354
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||    
T  32766293 gtatttaatcctgagtcagggacctatgtgacaacgaggtgcagagtcagggaccaaagtga 32766354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39015074 - 39015013
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||    
T  39015074 gtatttaatcctgagtcaaggatctatgtggcagcgaggtgcagagtcagggacaaaagtga 39015013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 803980 - 803889
Alignment:
Q  117 ttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    ||||||||| |||||||||| | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||| | || | |||||||||    
T  803980 ttttagaaatttgaattcaatacttttcaccacttttcaacaaattatttttatttatgtt-ctcttaaccaatgctccaatggcactcttta 803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24459500 - 24459561
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  24459500 gtatttaatcctgattcagggacctatgtgacagcgagatgcagagtcagggaccaaagtga 24459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40000388 - 40000449
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||| | |||||||||||||| ||||||||||||| |||||||||| |||||||    
T  40000388 gtatttaatcctcaatcagggatctatgtaacagcgaggtgcagagtcagggaccaaagtga 40000449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2910169 - 2910108
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||| |||||||||||||||||||||||||| |||| | |||  |||||||||||    
T  2910169 gtatttaatcccgagtcagggatctatgtgacagcgagctgcaaaatcaaagactaaagtga 2910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 31090232 - 31090176
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| | ||||||||||||    
T  31090232 tatttaatcctgagtcaaggacctatgtgacagcgagctgcagaatcagggactaaa 31090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 445602 - 445648
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccattttt 153  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  445602 actttttgacttttaggaagttgaattcaacacttttcaccattttt 445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17330284 - 17330342
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 59  Q
    |||||||||||||||||||||| ||||||||||| ||| |||| | ||| |||||||||    
T  17330284 gtatttaatcctgagtcagggacctatgtgacagtgagctgcagaatcaaggactaaag 17330342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24458129 - 24458068
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||  ||||||||||| |||||||| |||||| |||| | ||||||||||||||||    
T  24458129 gtatttaattttgagtcagggacctatgtgatagcgagctgcataatcagggactaaagtga 24458068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 6975919 - 6975837
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 191  Q
    |||||| ||||| |||| ||||||||||||||||||||||||  |||||| | ||||||| ||||| |||| |||||| ||||||    
T  6975919 acttttaaacttctagagagttgaattcaacatttttcacca-ctttcaacatattatttttatttttgtt-ctcttagccaatg 6975837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 14887555 - 14887626
Alignment:
Q  4 tttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 73  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||  ||||| |||||||  |||||||||||    
T  14887555 tttaatcctgagtcagggaccttcgtgacagcgaggtgcagagtttgggaccaaagtgaccatttactcaaa 14887626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15442025 - 15442063
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgagg 39  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  15442025 gtatttaatcctgagtcaggaatctttgtgacagcgagg 15442063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 33726405 - 33726451
Alignment:
Q  110 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 156  Q
    ||||||||||||||||||| |||| |  |||||||||||||||||||    
T  33726405 ttttaacttttagaaagttaaatttattatttttcaccatttttcaa 33726451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 2239607 - 2239652
Alignment:
Q  110 ttttaacttttagaaagttgaattcaacatttttcaccatttttca 155  Q
    |||||||||||| |||||| |||||| ||||||| |||||||||||    
T  2239607 ttttaacttttaaaaagttaaattcatcattttttaccatttttca 2239652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5915046 - 5915107
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||| ||||||||  || |||| ||| ||||||||||| ||||| ||||||||||||    
T  5915046 gtatttaattctgagtcaaagacctatttgaaagcgaggtgcagagtcatggactaaagtga 5915107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32765007 - 32764946
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| || |||| ||||| | || |||| | ||||||||||||||||    
T  32765007 gtatttaatcctgagtcagagacctatatgacaactagctgcagaatcagggactaaagtga 32764946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34037727 - 34037788
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||| | ||| || | ||||||| ||||||| ||||| ||||||||||||    
T  34037727 gtatttaatcctgagttatggacctttatgacagcaaggtgcagagtcaaggactaaagtga 34037788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17466882 - 17466930
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 49  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||    
T  17466882 gtatttaatcctgagtcagcggcttatgtgacagcgaggtgcagagtca 17466930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39016433 - 39016496
Alignment:
Q  1 gtatttaatcctgagtcaggga--tctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| ||  | |||||||||||||| |||| | |||| |||||||||||    
T  39016433 gtatttaatcctgagtcagagagatgtatgtgacagcgagctgcagaatcagagactaaagtga 39016496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 29349 - 29441
Alignment:
Q  115 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 209  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  29349 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 29441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13651174 - 13651234
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  13651174 gtatttaatcctgagtcagggacctatgtgacagc-aggtgcacagtcaaggactaaagtga 13651234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28591168 - 28591229
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||  |||||||    
T  28591168 gtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaaagtga 28591229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18400258 - 18400198
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||||||    
T  18400258 tatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtga 18400198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8074520 - 8074459
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||||||  |||||||||||||| |||| | ||||||||||||||||    
T  8074520 gtatttaatcctgagtcagggacttatgtgacagcgagctgcataatcagggactaaagtga 8074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 546090 - 546150
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| ||||||||||||||| |||| | || |||||||||||||    
T  546090 gtatttaatcctgagtcagggacctatgtgacagcgagctgcaaaatc-gggactaaagtga 546150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9538103 - 9538164
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| |||| ||||| |||| |||| |||||||||| |||||||    
T  9538103 gtatttaatcctgagtcagggacctatatgacaacgagatgcagagtcagggaccaaagtga 9538164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21069358 - 21069297
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| || || ||||||| ||||||||| |||||| |||||||||||    
T  21069358 gtatttaatcctgagtcagagacctctgtgacaacgaggtgcagagtcagagactaaagtga 21069297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40612713 - 40612774
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| ||| ||||||| ||| |||| | ||||||||||||||||    
T  40612713 gtatttaatcctgagtcagggacctacgtgacagtgagctgcaaaatcagggactaaagtga 40612774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19183019 - 19182971
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 49  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||    
T  19183019 gtatttaatcctgagtcagagacctatgtgacagcgaggtgcaaagtca 19182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9537092 - 9537033
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 60  Q
    ||||||||| || |||||| || |||||||||||||||||||| ||| ||||||||||||    
T  9537092 gtatttaattctaagtcagagacctatgtgacagcgaggtgcagagtgagggactaaagt 9537033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 14891199 - 14891258
Alignment:
Q  3 atttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||| |||||||| || |||||||||||||||||||| ||| |||||| |||||||    
T  14891199 atttaatcatgagtcagagacctatgtgacagcgaggtgcagagtgagggaccaaagtga 14891258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 28782706 - 28782773
Alignment:
Q  107 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttat 174  Q
    ||||||| ||||||| || ||||||||||||| |||| || |||||| || |||||||||||||||||    
T  28782706 acttttttacttttaaaatgttgaattcaacactttttacaattttttaacaaattatttctatttat 28782773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4592930 - 4592869
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| |||||||||||  |||||||||||||| | || | ||||||||||||||||    
T  4592930 gtatttaatcttgagtcagggacttatgtgacagcgagctacataatcagggactaaagtga 4592869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16611797 - 16611736
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| || |||||||||||||||||| | ||||| | | ||||||||    
T  16611797 gtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtga 16611736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25590499 - 25590451
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 50  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  25590499 gtatttaatcc-gagtcagggacctatgtgacagcgaggtgcagagtcag 25590451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 10317259 - 10317315
Alignment:
Q  122 gaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 178  Q
    ||||||||||||||||| |||||| |||||||||| | ||| ||||||||| |||||    
T  10317259 gaaagttgaattcaacacttttcatcatttttcaacacattctttctatttttgttc 10317315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2464738 - 2464677
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||| ||||||| ||| |||| |||||||||| |||| | |||| |||||||||||    
T  2464738 gtatttaatcatgagtcatggacctatatgacagcgagctgcagaatcagtgactaaagtga 2464677  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 24900410 - 24900447
Alignment:
Q  25 tatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  24900410 tatgtgacagcgaggtgcagagtcagggaccaaagtga 24900447  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 2466829 - 2466889
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    ||||||||||||| |||  || |||||||| ||||||||||| |||||| ||| |||||||    
T  2466829 tatttaatcctgaatcaatgacctatgtgatagcgaggtgcagagtcagagaccaaagtga 2466889  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8075887 - 8075935
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 49  Q
    |||||||||| ||| |||||||||||| | ||||||||||||| |||||    
T  8075887 gtatttaatcttgaatcagggatctatctaacagcgaggtgcagagtca 8075935  T

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Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 116124 - 116063
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 62  Q
    |||||||||||||||||||||| ||||||||||||||| |||| | | ||| ||||||||||    
T  116124 gtatttaatcctgagtcagggacctatgtgacagcgagctgcagaatgaggaactaaagtga 116063  T

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Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 79141 - 79085
Alignment:
Q  2 tatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    ||||||||| ||||||| ||| |||||||||||||||||||| ||||||| ||||||    
T  79141 tatttaatcatgagtcaaggacctatgtgacagcgaggtgcagagtcaggaactaaa 79085  T

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Target: scaffold0039; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 74367 - 74424
Alignment:
Q  1 gtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 58  Q
    |||||||||| ||||| ||||| ||||||||||| ||| |||| ||||||||||||||    
T  74367 gtatttaatcatgagttagggacctatgtgacagtgagttgcagagtcagggactaaa 74424  T

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