View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12606_high_3 (Length: 369)

Name: NF12606_high_3
Description: NF12606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12606_high_3
NF12606_high_3
[»] chr8 (23 HSPs)
chr8 (122-220)||(32131402-32131500)
chr8 (151-209)||(13131421-13131479)
chr8 (151-208)||(16972395-16972452)
chr8 (151-220)||(19327858-19327926)
chr8 (149-220)||(4326239-4326310)
chr8 (165-220)||(28879063-28879118)
chr8 (150-220)||(34102712-34102783)
chr8 (165-220)||(35453415-35453470)
chr8 (164-210)||(13265488-13265534)
chr8 (126-207)||(1088917-1088998)
chr8 (151-220)||(31459037-31459106)
chr8 (165-210)||(34286599-34286644)
chr8 (157-205)||(11988194-11988242)
chr8 (165-209)||(32213059-32213103)
chr8 (176-220)||(35168467-35168511)
chr8 (165-220)||(32975692-32975747)
chr8 (165-220)||(34338426-34338481)
chr8 (151-204)||(7638514-7638567)
chr8 (151-220)||(16706126-16706195)
chr8 (151-220)||(16926758-16926827)
chr8 (164-220)||(1089017-1089073)
chr8 (184-220)||(23412758-23412794)
chr8 (165-205)||(29243104-29243144)
[»] chr4 (28 HSPs)
chr4 (134-207)||(29996678-29996751)
chr4 (128-202)||(29877607-29877681)
chr4 (135-220)||(948047-948132)
chr4 (128-201)||(18424322-18424395)
chr4 (128-220)||(3564188-3564280)
chr4 (128-220)||(23297406-23297498)
chr4 (151-220)||(27368178-27368247)
chr4 (124-220)||(35124351-35124447)
chr4 (128-220)||(43699509-43699601)
chr4 (164-220)||(55638107-55638163)
chr4 (128-219)||(43415316-43415407)
chr4 (152-209)||(8130480-8130537)
chr4 (128-220)||(33533896-33533988)
chr4 (165-220)||(896975-897030)
chr4 (155-210)||(12495682-12495737)
chr4 (165-220)||(28074370-28074425)
chr4 (151-208)||(42611905-42611963)
chr4 (165-210)||(7148777-7148822)
chr4 (132-201)||(43740120-43740189)
chr4 (128-204)||(34526248-34526323)
chr4 (128-204)||(38345863-38345939)
chr4 (149-220)||(35010200-35010271)
chr4 (151-209)||(38515689-38515747)
chr4 (151-220)||(212974-213042)
chr4 (176-220)||(4331353-4331397)
chr4 (128-196)||(10794959-10795027)
chr4 (128-196)||(10796354-10796422)
chr4 (164-220)||(46650275-46650331)
[»] chr7 (24 HSPs)
chr7 (128-219)||(38372526-38372617)
chr7 (155-220)||(34922926-34922991)
chr7 (132-205)||(21249128-21249201)
chr7 (128-220)||(30181518-30181610)
chr7 (156-220)||(41677370-41677434)
chr7 (125-220)||(24414488-24414583)
chr7 (151-207)||(12473197-12473253)
chr7 (151-219)||(23119947-23120015)
chr7 (128-220)||(29390576-29390668)
chr7 (165-220)||(42083443-42083498)
chr7 (154-220)||(7098126-7098192)
chr7 (151-220)||(44613499-44613568)
chr7 (151-220)||(48021673-48021742)
chr7 (122-220)||(14536844-14536942)
chr7 (151-210)||(23356527-23356586)
chr7 (165-220)||(29378650-29378705)
chr7 (122-188)||(22515565-22515631)
chr7 (150-220)||(39803014-39803084)
chr7 (165-207)||(47511048-47511090)
chr7 (179-220)||(14691325-14691366)
chr7 (165-210)||(33288135-33288180)
chr7 (151-207)||(9546423-9546479)
chr7 (164-220)||(22319317-22319373)
chr7 (128-220)||(40629443-40629534)
[»] chr5 (37 HSPs)
chr5 (133-220)||(42851995-42852082)
chr5 (125-220)||(11991270-11991365)
chr5 (138-220)||(22201962-22202044)
chr5 (151-220)||(29922215-29922284)
chr5 (133-201)||(17128251-17128319)
chr5 (128-220)||(6150349-6150437)
chr5 (151-220)||(2878702-2878771)
chr5 (151-220)||(10537245-10537314)
chr5 (143-220)||(12467247-12467324)
chr5 (151-220)||(43010626-43010695)
chr5 (128-220)||(1372019-1372111)
chr5 (124-204)||(14243787-14243867)
chr5 (159-210)||(1473355-1473406)
chr5 (128-219)||(3520530-3520620)
chr5 (124-207)||(42558759-42558841)
chr5 (126-220)||(2670041-2670135)
chr5 (165-219)||(41534628-41534682)
chr5 (153-210)||(7984098-7984155)
chr5 (151-220)||(12987040-12987109)
chr5 (151-220)||(13060628-13060697)
chr5 (151-220)||(22573644-22573713)
chr5 (171-220)||(24030226-24030275)
chr5 (128-220)||(1576599-1576690)
chr5 (128-220)||(1608125-1608216)
chr5 (128-208)||(11163307-11163387)
chr5 (151-207)||(26002988-26003044)
chr5 (165-220)||(17657247-17657302)
chr5 (165-220)||(28625485-28625540)
chr5 (165-220)||(40452504-40452559)
chr5 (165-220)||(42706801-42706856)
chr5 (176-210)||(31637130-31637164)
chr5 (143-220)||(40152902-40152979)
chr5 (171-220)||(43265967-43266016)
chr5 (151-220)||(43318994-43319063)
chr5 (176-220)||(1868862-1868906)
chr5 (133-201)||(27981957-27982025)
chr5 (152-220)||(30852163-30852231)
[»] chr2 (22 HSPs)
chr2 (151-220)||(34913416-34913485)
chr2 (143-220)||(21788440-21788517)
chr2 (151-220)||(33321338-33321407)
chr2 (124-220)||(25836738-25836834)
chr2 (152-220)||(37409635-37409703)
chr2 (125-220)||(4026891-4026985)
chr2 (133-220)||(33321429-33321516)
chr2 (164-209)||(29133704-29133749)
chr2 (130-210)||(4090459-4090539)
chr2 (124-220)||(37419990-37420085)
chr2 (176-220)||(42839346-42839390)
chr2 (165-220)||(887417-887472)
chr2 (151-202)||(27703502-27703553)
chr2 (171-210)||(35731149-35731188)
chr2 (154-220)||(5516069-5516135)
chr2 (178-220)||(12442831-12442873)
chr2 (151-201)||(15155804-15155854)
chr2 (186-220)||(33555685-33555719)
chr2 (128-219)||(38215991-38216078)
chr2 (151-220)||(8441464-8441533)
chr2 (127-220)||(35515506-35515599)
chr2 (151-207)||(755781-755837)
[»] chr3 (26 HSPs)
chr3 (128-220)||(21296734-21296826)
chr3 (133-220)||(40581103-40581190)
chr3 (151-220)||(7292671-7292740)
chr3 (151-220)||(11528882-11528951)
chr3 (128-220)||(22809219-22809312)
chr3 (128-220)||(29270329-29270421)
chr3 (128-220)||(34707739-34707831)
chr3 (128-220)||(53218066-53218158)
chr3 (152-220)||(32901174-32901242)
chr3 (156-220)||(43971873-43971937)
chr3 (128-202)||(10272090-10272164)
chr3 (151-220)||(10448765-10448834)
chr3 (171-220)||(10521165-10521214)
chr3 (171-220)||(10667409-10667458)
chr3 (157-210)||(24842143-24842196)
chr3 (171-220)||(52421167-52421216)
chr3 (128-207)||(5129916-5129995)
chr3 (165-220)||(43079960-43080015)
chr3 (165-220)||(52021251-52021306)
chr3 (157-207)||(36266241-36266291)
chr3 (171-220)||(3845866-3845915)
chr3 (128-197)||(23555452-23555521)
chr3 (143-220)||(27769629-27769705)
chr3 (157-205)||(4257342-4257390)
chr3 (164-220)||(5129841-5129897)
chr3 (164-220)||(30198982-30199038)
[»] chr6 (21 HSPs)
chr6 (154-220)||(30533974-30534040)
chr6 (165-220)||(10054386-10054441)
chr6 (151-207)||(2040225-2040281)
chr6 (165-220)||(2034255-2034310)
chr6 (149-220)||(4272371-4272442)
chr6 (157-220)||(22816611-22816674)
chr6 (154-220)||(3211027-3211093)
chr6 (124-209)||(9201768-9201853)
chr6 (151-220)||(29623503-29623572)
chr6 (179-220)||(34509931-34509972)
chr6 (171-210)||(1240647-1240686)
chr6 (165-220)||(2027202-2027257)
chr6 (165-220)||(12817118-12817173)
chr6 (122-220)||(8014751-8014848)
chr6 (151-220)||(6632650-6632719)
chr6 (151-220)||(6758618-6758687)
chr6 (165-210)||(10755316-10755361)
chr6 (151-207)||(2255725-2255781)
chr6 (176-220)||(7267791-7267835)
chr6 (128-188)||(10658304-10658364)
chr6 (128-220)||(24625819-24625911)
[»] chr1 (30 HSPs)
chr1 (123-220)||(18327487-18327584)
chr1 (128-220)||(1265719-1265811)
chr1 (151-220)||(10365162-10365231)
chr1 (151-220)||(10850097-10850166)
chr1 (151-220)||(20169255-20169324)
chr1 (128-220)||(10082218-10082310)
chr1 (128-220)||(37712036-37712127)
chr1 (143-218)||(49738328-49738404)
chr1 (165-220)||(6337782-6337837)
chr1 (124-220)||(28689966-28690064)
chr1 (128-216)||(391136-391225)
chr1 (171-220)||(4068126-4068175)
chr1 (124-220)||(26946130-26946227)
chr1 (133-210)||(35590103-35590180)
chr1 (151-220)||(35897649-35897718)
chr1 (176-220)||(15515373-15515417)
chr1 (128-204)||(16225477-16225553)
chr1 (154-210)||(41003381-41003437)
chr1 (176-220)||(41196736-41196780)
chr1 (157-220)||(26542970-26543033)
chr1 (165-220)||(36423007-36423062)
chr1 (157-220)||(46501027-46501090)
chr1 (165-220)||(51409733-51409788)
chr1 (182-220)||(39941463-39941501)
chr1 (124-220)||(1565408-1565502)
chr1 (151-220)||(15631895-15631964)
chr1 (171-220)||(26988159-26988208)
chr1 (171-207)||(16889004-16889040)
chr1 (128-220)||(19284864-19284956)
chr1 (151-199)||(46689597-46689645)
[»] scaffold0157 (1 HSPs)
scaffold0157 (155-210)||(24740-24795)
[»] scaffold0332 (1 HSPs)
scaffold0332 (171-220)||(14772-14821)
[»] scaffold1088 (1 HSPs)
scaffold1088 (132-220)||(1266-1354)
[»] scaffold0012 (1 HSPs)
scaffold0012 (158-205)||(178498-178545)
[»] scaffold0048 (1 HSPs)
scaffold0048 (171-220)||(58894-58943)
[»] scaffold1367 (1 HSPs)
scaffold1367 (151-207)||(1049-1105)


Alignment Details
Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 32131402 - 32131500
Alignment:
Q  122 gacccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| ||||||||| ||||| | ||||||||||||  ||||| |||| |||||||||||||| ||||||| ||||||||||||  ||||||||    
T  32131402 gacccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttat 32131500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 13131421 - 13131479
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 209  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  13131421 ttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataagtttgtca 13131479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 16972452 - 16972395
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtc 208  Q
    |||||||||||||||| || |||| ||||||||| |||||||||||||||||||||||    
T  16972452 ttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtc 16972395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 19327858 - 19327926
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||| ||| ||||||||    
T  19327858 ttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttat 19327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 4326310 - 4326239
Alignment:
Q  149 gtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||| |||| | |||| ||||||  |||||||||||||||||||||| | ||| ||||||||    
T  4326310 gtttatgcaaaacagtttagggaaataaataagtctttatgtattattcataagtttataaatgtagtttat 4326239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 28879063 - 28879118
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  28879063 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 28879118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 34102783 - 34102712
Alignment:
Q  150 tttatgcaaaacaatttatga-aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||| | ||| ||||||||    
T  34102783 tttatgcaaaataatttatgccaaataaataagcttttatgtattattcatgagtttttaaatgtagtttat 34102712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 35453415 - 35453470
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||  ||||||||    
T  35453415 ttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttat 35453470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 13265488 - 13265534
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||    
T  13265488 tttatgcaaataaataagcttttatgtattattcataagcttgtcaa 13265534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 1088917 - 1088998
Alignment:
Q  126 catttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||||||||||||||| ||||  | ||||||||||||| ||||| |||  |||||| |||| |||||||| |||||| ||||    
T  1088917 catttgaattgacttatttttaagcttatgcaaaacaaattatgcaaacaaataagattttgtgtattatccataagcttgt 1088998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 31459037 - 31459106
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||| || |||||| |||| |||||  |||||| ||||||| |||||||||||||||||||||||    
T  31459037 ttatgaaaagcagtttatgtaaataaataaatttttatatattatttataagtttgtcaatatagtttat 31459106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 34286644 - 34286599
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  34286644 ttatgtaaataaataagcttttatgtattattcataagcttgtcaa 34286599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 11988194 - 11988242
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagttt 205  Q
    ||||||||||||| |||| |||||| |||||||||||||| ||||||||    
T  11988194 aaaacaatttatgcaaataaataagtttttatgtattatttataagttt 11988242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 32213103 - 32213059
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtca 209  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||    
T  32213103 ttatgcaaataaataagcttttatgtattattcataagcttgtca 32213059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 35168511 - 35168467
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||    
T  35168511 aataagcttttatgtattattcataagcttgtcaaggtagtttat 35168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 32975692 - 32975747
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||| ||||||||||||| |||||||  ||||||||    
T  32975692 ttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttat 32975747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 34338481 - 34338426
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||| |||||||  |||||||| |||||||||||||||||||||||    
T  34338481 ttatgcaaataaatgagctttttggtattatttataagtttgtcaatatagtttat 34338426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 7638514 - 7638567
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 204  Q
    |||||||||||  |||||| |||| ||| ||||||||||||||||| |||||||    
T  7638514 ttatgcaaaactgtttatgcaaataaatcagcttttatgtattattaataagtt 7638567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 16706195 - 16706126
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||   ||||| |||| |||| | ||||||||||||||||||||||||  ||| ||||||||    
T  16706195 ttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttat 16706126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 16926827 - 16926758
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||| ||| | |||| ||||| |||| |||||||||| || ||||||| ||||||||||||    
T  16926827 ttatgtaaaacaacttaggtaaataaataaactttaatgtattattgattagtttgtaaatatagtttat 16926758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 1089017 - 1089073
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||| |||||| ||| |||||||||||||||| |||||||| || |||||    
T  1089017 tttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttat 1089073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 23412758 - 23412794
Alignment:
Q  184 tttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  23412758 tttatgtattattcataaacttgtcaatatagtttat 23412794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 29243144 - 29243104
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagttt 205  Q
    ||||| |||| ||||||||||||||||||||| ||||||||    
T  29243144 ttatgcaaataaataagcttttatgtattatttataagttt 29243104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 29996751 - 29996678
Alignment:
Q  134 ttgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||||||| ||||| |||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  29996751 ttgacttatttttgagtttttgcaaaacaatttatgcaaataaataagcttttatatattattcataagtttgt 29996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 29877607 - 29877681
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataag 202  Q
    |||| |||| |||| ||||| | ||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29877607 tttggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataag 29877681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 948047 - 948132
Alignment:
Q  135 tgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||  | |||||||||| |  |||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||    
T  948047 tgacttactttttagcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttat 948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 18424395 - 18424322
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 201  Q
    ||||||||||| || ||||| | ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  18424395 tttgaattgacatatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataa 18424322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 3564188 - 3564280
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||  ||||| | ||||||||||||  |||||||||| ||||| ||||||| |||||||||||||||||||||  ||||||||    
T  3564188 tttggattgacttgtttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttat 3564280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 23297406 - 23297498
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| ||||| | |||||||||| |  ||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  23297406 tttggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 23297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 27368247 - 27368178
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||| ||| ||||    
T  27368247 ttatgtaaaacaacttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttat 27368178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 35124351 - 35124447
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| ||||||||| ||||| | ||||||||||||  ||||| ||||  |||| |||||||||| |||||||||| |||||||  ||||||||    
T  35124351 cccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttat 35124447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 43699601 - 43699509
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| ||||| | ||||| ||||||| ||||  |||| ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  43699601 tttggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttat 43699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 55638163 - 55638107
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  55638163 tttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttat 55638107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 43415407 - 43415316
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 219  Q
    |||||||||||||| ||||| | ||| | ||||||| || || |||| |||||| |||||||||||||||||||| |||| ||| |||||||    
T  43415407 tttgaattgacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagttta 43415316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 8130480 - 8130537
Alignment:
Q  152 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 209  Q
    |||||||||||  ||||| |||| |||||||||||||| |||||||||||||||||||    
T  8130480 tatgcaaaacagcttatgcaaataaataagcttttatgcattattcataagtttgtca 8130537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 33533896 - 33533988
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||| |||||| |||||||| ||||| ||||  ||||||||  | |||||||||||||||| |||||  ||||||||    
T  33533896 tttggattgacttaattttgagtttatacaaaacaacttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagtttat 33533988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 896975 - 897030
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  896975 ttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttat 897030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 12495737 - 12495682
Alignment:
Q  155 gcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  12495737 gcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaa 12495682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 28074370 - 28074425
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  28074370 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 28074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 42611963 - 42611905
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttt-tatgtattattcataagtttgtc 208  Q
    ||||||||||||| ||||| |||| |||||||||| ||||||||||||||||| |||||    
T  42611963 ttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtc 42611905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 7148777 - 7148822
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  7148777 ttatgcaaataaataagcttttatgtattattcataagcttgtcaa 7148822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 43740189 - 43740120
Alignment:
Q  132 aattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 201  Q
    |||||||||| ||||   ||||| ||||||||||||||||||| |||||| |||||  ||||||||||||    
T  43740189 aattgacttatttttaaatttatacaaaacaatttatgaaaataaataagtttttacatattattcataa 43740120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 34526248 - 34526323
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 204  Q
    |||||||||||||||||| | | ||||| |||| | |||||| |||| ||||||||||||||| | |||||||||||    
T  34526248 tttgaattgacttactttcgagcttatgaaaaatagtttatgcaaataaataagcttttatgt-taattcataagtt 34526323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 38345939 - 38345863
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 204  Q
    |||| |||||||||  |||| | ||||||||||||  ||||  |||| |||||||||||||||| ||||||||||||    
T  38345939 tttggattgacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataagtt 38345863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 35010200 - 35010271
Alignment:
Q  149 gtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||| |||| ||| || | |||| |||||| |||||||||||||| |||||||||||||  ||||||||    
T  35010200 gtttatggaaaataatataggtaaataaataagtttttatgtattatttataagtttgtcaacgtagtttat 35010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 38515747 - 38515689
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 209  Q
    |||||||||||| ||||||  ||| ||||||| | ||||||||||||||||| ||||||    
T  38515747 ttatgcaaaacagtttatgggaataaataagcctctatgtattattcataagcttgtca 38515689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 213042 - 212974
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| |||||| |||||| ||||||||||||| |||| ||  ||||||||    
T  213042 ttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttat 212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 4331353 - 4331397
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| |||||||||||| ||||||||  ||||||||    
T  4331353 aataagcttttatttattattcataactttgtcaaggtagtttat 4331397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 10795027 - 10794959
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattatt 196  Q
    |||||||||||||| ||| | | ||||||||||||  || || |||| |||||| ||||||||||||||    
T  10795027 tttgaattgacttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatt 10794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 10796354 - 10796422
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattatt 196  Q
    ||||||||| |||| ||| | | ||||||||||||| || || |||| |||||| ||||||||||||||    
T  10796354 tttgaattggcttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatt 10796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 46650275 - 46650331
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||| |||||||||| ||||||||||||||| ||||| | | ||||||||    
T  46650275 tttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttat 46650331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 38372526 - 38372617
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 219  Q
    |||| ||||||||| ||||| | ||||||||||||  ||||| |||| |||||||| ||||||||||||||||||||||||||  |||||||    
T  38372526 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagttta 38372617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 34922926 - 34922991
Alignment:
Q  155 gcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 34922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 21249128 - 21249201
Alignment:
Q  132 aattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagttt 205  Q
    |||| ||||| ||||| ||||||||||||| | ||||| |||| |||||| |||||||||||||||||||||||    
T  21249128 aattaacttatttttgcgtttatgcaaaactacttatgcaaataaataagtttttatgtattattcataagttt 21249201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 30181518 - 30181610
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||| | |||||||| |||| ||| | |||| || |||||||||||||||||||||||| |||||||  ||||||||    
T  30181518 tttggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttat 30181610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 41677370 - 41677434
Alignment:
Q  156 caaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| ||||| |||| |||||  ||||||||||||||||||||||||||||| ||||||||    
T  41677370 caaaacaacttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttat 41677434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 24414488 - 24414583
Alignment:
Q  125 ccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||| || || || | |||||||||| |||||||| |||| ||||| | |||||||||||| |||||| ||||||| |||| ||||    
T  24414488 ccatttgaattgacgtatttatgaggttatgcaaaaaaatttatgtaaataaataaacatttatgtattatccataagcttgtcaagatagcttat 24414583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 12473197 - 12473253
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    ||||||||||||| ||||| |||  |||||| |||||||||||||||||||||||||    
T  12473197 ttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataagtttgt 12473253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 23120015 - 23119947
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 219  Q
    |||||||||||||  |||| |||| ||||| |||| | ||||||||||||||||||||||| |||||||    
T  23120015 ttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagttta 23119947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 29390668 - 29390576
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| ||||| ||||||| ||||||| ||||| |||| ||||| |||| |||||||||||||||| |||| ||  ||||||||    
T  29390668 tttggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttat 29390576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 42083498 - 42083443
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||| ||||||||||||||||||||||||| |||||| |||||    
T  42083498 ttatgtaaataaataagtttttatgtattattcataagtttgtaaatataatttat 42083443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 7098192 - 7098126
Alignment:
Q  154 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||| | |||||  |||| |||||| ||||||| |||||||||||||||||||| |||||||||    
T  7098192 tgcaaaatagtttatacaaataaataagattttatgaattattcataagtttgtcaagatagtttat 7098126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 44613568 - 44613499
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||  ||||| |||| ||||||||||||| ||||||||||||| |||| ||  ||||||||    
T  44613568 ttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttat 44613499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 48021742 - 48021673
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||||||||||||| |||| |||||||| |||| ||||||||||||| |||| ||  ||||||||    
T  48021742 ttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttat 48021673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 14536844 - 14536942
Alignment:
Q  122 gacccatttgaatt-gacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| ||| |||||| |||||  |||||  ||||||| ||||  |||| |||||  |||||||||||||||||||| ||||||| |||||||||    
T  14536844 gacccatttggatttgacttatttttgaatttattaaaaacaacttatagaaataaataat-ttttatgtattattcataagattgtcaagatagtttat 14536942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 23356586 - 23356527
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    |||| |||||||| |||||||||| ||||||  ||| ||||||||||| |||||||||||    
T  23356586 ttatacaaaacaacttatgaaaataaataaggctttttgtattattcacaagtttgtcaa 23356527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 29378650 - 29378705
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||||||||| || ||||||||||  ||||||||    
T  29378650 ttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttat 29378705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 22515631 - 22515565
Alignment:
Q  122 gacccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttat 188  Q
    |||||||||| |||||||||  |||| | |||||||||| |  |||||||||| |||||||||||||    
T  22515631 gacccatttggattgacttatatttgagcttatgcaaaatatattatgaaaataaataagcttttat 22515565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 39803014 - 39803084
Alignment:
Q  150 tttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||| || |||||||||| ||| ||||||| | |||| || ||||||||||||| || ||||||    
T  39803014 tttatgcaaaataaattatgaaaataaatgagcttttttctattgtttataagtttgtcaacattgtttat 39803084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 47511048 - 47511090
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||    
T  47511048 ttatgcaaataaataagcttttatgtattattcataagcttgt 47511090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 14691366 - 14691325
Alignment:
Q  179 aagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||||||||||||| |||||||| || |||||    
T  14691366 aagcttttatgtattattcataagcttgtcaatgtaatttat 14691325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 33288180 - 33288135
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||| |||| |||||||||||||||||||||||| || |||||||    
T  33288180 ttatgcaaataaataagcttttatgtattattcattagcttgtcaa 33288135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 9546479 - 9546423
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    ||||| |||| |||||||| |||| |||||  ||||||||||||||||||| |||||    
T  9546479 ttatgtaaaataatttatgcaaataaataaagttttatgtattattcataaatttgt 9546423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 22319373 - 22319317
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||| ||||| | || ||||||||||||||||||||| || |||||||||    
T  22319373 tttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttat 22319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 40629534 - 40629443
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| ||||| | ||||||||||||  ||||  |||| ||||| |||| |||||||||||||||| |||||||  ||||||||    
T  40629534 tttggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaacttt-atgtattattcataagcttgtcaaggtagtttat 40629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 42851995 - 42852082
Alignment:
Q  133 attgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| ||||||| ||||||||||||  ||||  |||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  42851995 attggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttat 42852082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 11991270 - 11991365
Alignment:
Q  125 ccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||| ||||||||| |||   | ||||||||||||| ||||| |||| ||||||||||||||||||||| ||||| |||| ||||| ||||||    
T  11991270 ccatttggattgacttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttat 11991365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 22202044 - 22201962
Alignment:
Q  138 cttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||| | ||||||||||||  ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  22202044 cttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 22201962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 29922284 - 29922215
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||| |||||| |||| |||||| |||||||||||||||||||| |||||||  ||||||||    
T  29922284 ttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttat 29922215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 17128251 - 17128319
Alignment:
Q  133 attgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 201  Q
    ||||||||| ||||| | ||||||||||||  ||||| |||| ||||||||||||||||||||||||||    
T  17128251 attgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataa 17128319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 6150349 - 6150437
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| ||||| ||||| ||||||||||||||  ||||| ||||||    | ||||||||||||||||||||||||||||  ||||||||    
T  6150349 tttgaattcacttatttttgagtttatgcaaaacagcttatgcaaatga----ggttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 2878771 - 2878702
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||||  ||||| |||| ||||||||||||| |||||||||||||||||||||| | ||||||    
T  2878771 ttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttat 2878702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 10537314 - 10537245
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||  ||||| |||| ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  10537314 ttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttat 10537245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 12467247 - 12467324
Alignment:
Q  143 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||||| ||||| |  ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  12467247 ttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 12467324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 43010626 - 43010695
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||| ||||| |||| ||||| ||||||||||||||||||| |||||||| | ||||||||    
T  43010626 ttatgtaaaacaacttatgtaaataaataaacttttatgtattattcatacgtttgtcattgtagtttat 43010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 1372111 - 1372019
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||| | |||||||||||| |||||| |||| ||||  ||||||||||||||| ||||| |||| ||| | ||||||    
T  1372111 tttggattgacttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttat 1372019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 14243787 - 14243867
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 204  Q
    |||| ||| ||||||||| ||||| | ||||||||||||  ||||| |||| ||||||||| |||||| ||||||||||||    
T  14243787 cccacttggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagcttctatgtaatattcataagtt 14243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 1473355 - 1473406
Alignment:
Q  159 aacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  1473355 aacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaa 1473406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 3520620 - 3520530
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 219  Q
    |||| ||||||||| ||||  | |||||||||||| |||||| |||| ||||| |||||| |||||||||||||| |||||||  |||||||    
T  3520620 tttggattgacttattttttagcttatgcaaaacagtttatgtaaataaataacctttta-gtattattcataagcttgtcaaggtagttta 3520530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 42558841 - 42558759
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||||||| ||||||||| |||||| || ||||||||||  |||||  ||| |||||||||||| ||| |||||||||||||||    
T  42558841 cccatttggattgacttatttttggatt-atgcaaaacagcttatgtgaataaataagcttttacgtactattcataagtttgt 42558759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 2670041 - 2670135
Alignment:
Q  126 catttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||  |||  ||||| | ||||| |||||| |||||| |||| || || |||||||||| ||||||||||||||||||  ||||||||    
T  2670041 catttgaattcgcttgtttttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttat 2670135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 41534628 - 41534682
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 219  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  |||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagttta 41534682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 7984098 - 7984155
Alignment:
Q  153 atgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||| ||||| ||||| |||| | |||| ||||||||||||||||||||||||||||    
T  7984098 atgcataacaacttatgcaaataactaagtttttatgtattattcataagtttgtcaa 7984155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 12987109 - 12987040
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| || ||||| |||| |||||||||||||||||| |||||||| |||||||  ||||||||    
T  12987109 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttat 12987040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 13060697 - 13060628
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| || ||||| |||| |||||||||||||||||| |||||||| |||||||  ||||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttat 13060628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 22573644 - 22573713
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| ||| || |||| ||||||||| |||||||||| ||| ||||||||    
T  22573644 ttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttat 22573713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 24030226 - 24030275
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  24030226 aaataaataagcttttatgtattattcataagcttgtcaaagtagtttat 24030275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 1576599 - 1576690
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| | ||||| ||||||||||||  ||| | |||| ||||| |||||||||||| |||||||| |||||||| ||||||||    
T  1576599 tttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttat 1576690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 1608216 - 1608125
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| | ||||| ||||||||||||  ||| | |||| ||||| |||||||||||| |||||||| |||||||| ||||||||    
T  1608216 tttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttat 1608125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 11163387 - 11163307
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtc 208  Q
    |||| ||||||||| ||||  | ||||||||||||  ||||| |||| |||||| |||||||||| ||||||||| |||||    
T  11163387 tttggattgacttattttttagcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtc 11163307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 26002988 - 26003044
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||| ||||||| |||||| |||| |||||| |||||||||||||| ||||||||||    
T  26002988 ttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgt 26003044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 17657247 - 17657302
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||||||||||||||| ||| || | ||||||||    
T  17657247 ttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttat 17657302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 28625485 - 28625540
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||  ||||||||    
T  28625485 ttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttat 28625540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 40452559 - 40452504
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||| ||||||||||||||| |||||||||||| |||||||  ||||||||    
T  40452559 ttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttat 40452504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 42706801 - 42706856
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||  ||||||||    
T  42706801 ttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttat 42706856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 31637164 - 31637130
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||||||||||||||||||||||| |||||||    
T  31637164 aataagcttttatgtattattcataagcttgtcaa 31637130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 40152979 - 40152902
Alignment:
Q  143 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||  ||||||||||||  |||| |||||| |||||| |||||| ||||| ||||| || |||||||||    
T  40152979 ttttgagtttatctaaaacaatttatataaataaataagtttttatttattatccataaatttgttaagatagtttat 40152902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 43266016 - 43265967
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||||||||||| ||||||||| |||| || |||||||||    
T  43266016 aaataaataagcttttatgtatcattcataagcttgttaagatagtttat 43265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 43318994 - 43319063
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| |||| |  ||||||||||||| ||||| |||| ||| ||||||||    
T  43318994 ttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttat 43319063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 1868862 - 1868906
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||    
T  1868862 aataagcttttatgtattattcacaagcttgtcaaggtagtttat 1868906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 27982025 - 27981957
Alignment:
Q  133 attgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 201  Q
    ||||||||| |||||   |||| |||||||  |||||||||| |||||  |||||||||||||||||||    
T  27982025 attgacttatttttgaacttatacaaaacatcttatgaaaataaataaatttttatgtattattcataa 27981957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 30852163 - 30852231
Alignment:
Q  152 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||  ||||| |||| ||||| ||||||||||||||| ||||||| || ||| ||||||||    
T  30852163 tatgtaaaacagattatgcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttat 30852231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 34913485 - 34913416
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||| || |||||||||    
T  34913485 ttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttat 34913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 21788440 - 21788517
Alignment:
Q  143 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||| |||| || |||||||||    
T  21788440 ttttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttat 21788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 33321407 - 33321338
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| || || |||| ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  33321407 ttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttat 33321338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 25836834 - 25836738
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| |||| ||||| |  |  ||||||||  ||||| |||| |||| |||||||||||||||||||||| |||||||  ||||||||    
T  25836834 cccatttgaattgccttatttttgagcctgcgcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttat 25836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 37409635 - 37409703
Alignment:
Q  152 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||| ||||| |||| |||||||||||| |||||||||   ||||||||||| ||||||||    
T  37409635 tatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttat 37409703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 4026891 - 4026985
Alignment:
Q  125 ccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| ||| |||| ||||| | |||||||||||   ||||| |||| ||||||||||||||||||| ||||||| |||||||  ||||||||    
T  4026891 ccatttgatttggcttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtatta-tcataagcttgtcaaggtagtttat 4026985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 33321516 - 33321429
Alignment:
Q  133 attgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||| ||||  | ||||||||||||| ||||| |||| | |||| |||||||||||| ||||||| |||||||  ||||||||    
T  33321516 attgacttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttat 33321429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 29133749 - 29133704
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtca 209  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||    
T  29133749 tttatgcaaataaataatcttttatgtattattcataagtttgtca 29133704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 4090459 - 4090539
Alignment:
Q  130 tgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||| |||| ||||| | ||||||||||||  ||||| |||| ||||| |||| |||||||||||||||  |||||||    
T  4090459 tgaattggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaa 4090539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 37420085 - 37419990
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| |||| |||| ||||  | ||||| |||| |||||||| |||| ||||||||||||||| | |||||||| ||||||||  ||||||||    
T  37420085 cccatttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgt-taattcataattttgtcaaggtagtttat 37419990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 42839390 - 42839346
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||    
T  42839390 aataagtttttatgtattattcataagtttgtcaagttagtttat 42839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 887417 - 887472
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||| ||||||||||||||| |||||||  ||||||||    
T  887417 ttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttat 887472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 27703553 - 27703502
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataag 202  Q
    ||||||||||||  ||||| |||| ||||||||||||| |||||||||||||    
T  27703553 ttatgcaaaacagcttatgcaaataaataagcttttatatattattcataag 27703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 35731149 - 35731188
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  35731149 aaataaataagcttttatgtattattcatgagtttgtcaa 35731188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 5516069 - 5516135
Alignment:
Q  154 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||  ||||| |||  ||||||||| ||||| |||||||||||||||| ||| ||||||||    
T  5516069 tgcaaaacagcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttat 5516135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 12442831 - 12442873
Alignment:
Q  178 taagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| |||||||||||||| ||||||| |||||||||    
T  12442831 taagcttttaggtattattcataagcttgtcaagatagtttat 12442873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 15155804 - 15155854
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 201  Q
    ||||| ||||||| |||||||||| |||| |||||||||||||||| ||||    
T  15155804 ttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataa 15155854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 33555685 - 33555719
Alignment:
Q  186 tatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||||||||||| ||||||||||||    
T  33555685 tatgtattattcataagtttgtaaatatagtttat 33555719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 38215991 - 38216078
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 219  Q
    |||| ||||||||| ||||| | ||||||||||||  ||||| |||| |||||    |||||||||||||||||| |||||||  |||||||    
T  38215991 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagttta 38216078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 8441464 - 8441533
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||| ||  ||||| |||| |||| | |||||||||||||| |||||||||| ||| ||||||||    
T  8441464 ttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttat 8441533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 35515599 - 35515506
Alignment:
Q  127 atttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| |||| ||| | | ||||| |||||| |||| | |||| |||| |  ||||||||||||| |||||||||| ||| ||||||||    
T  35515599 atttgaattggcttattttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttat 35515506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 755837 - 755781
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    ||||||||||||| ||| | |||| | ||||||||||||||||||||| ||| ||||    
T  755837 ttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgt 755781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 21296734 - 21296826
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||| | ||||||||||||||||||| |||| |||||| |||||| ||||||||||| |||| ||||  ||||||||    
T  21296734 tttggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttat 21296826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 40581190 - 40581103
Alignment:
Q  133 attgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||  |||| | ||||||||||||| ||||| |||| ||||||||||||||||||||| ||||| |||||||  ||||||||    
T  40581190 attgacttatctttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttat 40581103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 7292671 - 7292740
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||| ||| ||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  7292671 ttatgtaaagcaacttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttat 7292740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 11528882 - 11528951
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| || | |||||||||||||||||||||||||| ||||| ||| ||||||||    
T  11528882 ttatgcaaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttat 11528951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 22809312 - 22809219
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagc-ttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||| ||||| | ||||||||||||  ||||| |||| ||||||| |||||| ||||||||||||| |||||||  ||||||||    
T  22809312 tttgaattgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttat 22809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 29270329 - 29270421
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||| | ||||||||||||| ||||   ||| ||||||||||||||||||||||||||| || |||| ||| |||||    
T  29270329 tttggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttat 29270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 34707831 - 34707739
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||| | ||||||||||||| ||| | ||||  |||||||||||||||||||||||||| |||| ||  ||||||||    
T  34707831 tttggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttat 34707739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 53218158 - 53218066
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||  | ||||||||||||| |||||  ||| |||||| |||||||||||||||||||| |||||||  ||||||||    
T  53218158 tttggattgacttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttat 53218066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 32901242 - 32901174
Alignment:
Q  152 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||||||| || ||||| || |||||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttat 32901174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 43971937 - 43971873
Alignment:
Q  156 caaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||| | |||| ||||||||||||| ||||||||| |||||||| || |||||||||    
T  43971937 caaaacaatttacgtaaataaataagcttttatttattattcacaagtttgttaaaatagtttat 43971873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 10272090 - 10272164
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataag 202  Q
    |||| ||||||||| ||||  | ||||||||||||| | ||| |||| ||||| |||||||||||||||||||||    
T  10272090 tttggattgacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataag 10272164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 10448765 - 10448834
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| |||| || ||||||||||||| ||||| |||| ||| ||||||||    
T  10448765 ttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttat 10448834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 10521165 - 10521214
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  10521165 aaataaataagcttatatgtattattcataagcttgtcaatgtagtttat 10521214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 10667409 - 10667458
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  10667409 aaataaataagcttatatgtattattcataagcttgtcaatgtagtttat 10667458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 24842196 - 24842143
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||| ||||| |||| |||||  ||||||||||||||||||||||||||||    
T  24842196 aaaacaacttatgcaaataaataaatttttatgtattattcataagtttgtcaa 24842143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 52421216 - 52421167
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  52421216 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 52421167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 5129995 - 5129916
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||||||||||||| ||||  | ||||||||||||| ||||| |||  |||||| |||| |||||||| |||||| ||||    
T  5129995 tttgaattgacttatttttaagcttatgcaaaacaaattatgcaaacaaataagattttgtgtattatccataagcttgt 5129916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 43080015 - 43079960
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  43080015 ttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttat 43079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 52021251 - 52021306
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||  ||||||||    
T  52021251 ttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttat 52021306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 36266241 - 36266291
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||||| |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  36266241 aaaacagtttatgcaaataaataaacttttatgtattatttataagtttgt 36266291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 3845866 - 3845915
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||||||| ||||||||||||| |||||||  ||||||||    
T  3845866 aaataaataagcttttatatattattcataagcttgtcaagctagtttat 3845915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 23555452 - 23555521
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattc 197  Q
    |||| |||| |||| ||||| | |||| | ||||| |||||| |||| ||||||||||||||||||||||    
T  23555452 tttggattggcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 27769629 - 27769705
Alignment:
Q  143 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||||||||||| ||||| |||| ||| | ||||| | ||||||| ||||| |||||||| ||||||||    
T  27769629 ttttgagtttatgcaaaacaacttatgcaaataaatgaactttt-tatattatttataagcttgtcaatgtagtttat 27769705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 4257390 - 4257342
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagttt 205  Q
    ||||||| ||||| |||| |||||| |||||||||||||| ||||||||    
T  4257390 aaaacaacttatgcaaataaataagtttttatgtattatttataagttt 4257342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 5129897 - 5129841
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||| |||||| ||| |||||||||||||||| |||||||| || |||||    
T  5129897 tttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttat 5129841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 30199038 - 30198982
Alignment:
Q  164 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||| |||||| |||||||| ||||||||||||| || ||| ||||||||    
T  30199038 tttatgcaaataaataagtttttatgtgttattcataagttagtaaatgtagtttat 30198982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 30533974 - 30534040
Alignment:
Q  154 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||  ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  30533974 tgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttat 30534040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 10054386 - 10054441
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  10054386 ttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttat 10054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 2040281 - 2040225
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    ||||||||||||| ||||  |||| ||||||||||||| ||||||||||||||||||    
T  2040281 ttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgt 2040225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 2034310 - 2034255
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||  ||||||||    
T  2034310 ttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttat 2034255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 4272371 - 4272442
Alignment:
Q  149 gtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||||||||||||| |||| |||||  ||||||||||||| ||||||||| | ||| ||||||||    
T  4272371 gtttatacaaaacaatttatgcaaataaataactttttatgtattatacataagtttataaatgtagtttat 4272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 22816674 - 22816611
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| |||| |||||| ||||||||| ||||||||||||| | |||||| |||||    
T  22816674 aaaacaatttatgcaaataaataagtttttatgtaatattcataagtttttaaatataatttat 22816611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 3211093 - 3211027
Alignment:
Q  154 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||  ||||| |||| ||||||||||||||||||| | ||||| |||||||| ||||||||    
T  3211093 tgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttat 3211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 9201853 - 9201768
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 209  Q
    |||||||  |||| |||| ||||| | ||| ||||||||  ||||| |||||||||||||||  ||||||||||||||| ||||||    
T  9201853 cccattttgattggcttaattttgagcttacgcaaaacagcttatgcaaatgaataagctttgctgtattattcataagcttgtca 9201768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 29623572 - 29623503
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| ||||| ||||||| ||||||| || ||||||| ||| ||||||||    
T  29623572 ttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttat 29623503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 34509931 - 34509972
Alignment:
Q  179 aagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  34509931 aagcttttatgtattattcataagtttgtcaatggagtttat 34509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 1240686 - 1240647
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  1240686 aaataaataagcttttatgtattattcataagcttgtcaa 1240647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 2027257 - 2027202
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||||||||| |||||||| ||||||||||| | |||||||    
T  2027257 ttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttat 2027202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 12817173 - 12817118
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||||| |||||||||||||||| | |||||| ||||||||    
T  12817173 ttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttat 12817118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 8014751 - 8014848
Alignment:
Q  122 gacccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| |||| |||| ||||| ||||||  ||||||  ||||| |||| | |||||||||||  |||||||||||| |||||||  ||||||||    
T  8014751 gacccatttggattggctta-ttttgagtttatagaaaacagcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttat 8014848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 6632650 - 6632719
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||||||| ||||| |||| |||| |||||||||||||||| ||||  |||| ||| ||||||||    
T  6632650 ttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttat 6632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 6758618 - 6758687
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| ||||||||||| | |||||| |||||| |||| ||  ||||||||    
T  6758618 ttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttat 6758687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 10755361 - 10755316
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||    
T  10755361 ttatgcaaataaataagcttttacgtattattcataagcttgtcaa 10755316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 2255725 - 2255781
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    ||||||||||| | ||||| |||| ||| ||||||||||||| ||||||||| ||||    
T  2255725 ttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgt 2255781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 7267791 - 7267835
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||    
T  7267791 aataagcttttatgtattattcataagcttgccaaggtagtttat 7267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 10658364 - 10658304
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttat 188  Q
    ||||||||| |||| ||||| ||||||| |||| |||| ||| |||| |||||||||||||    
T  10658364 tttgaattgtcttatttttgagtttatgaaaaataattaatgcaaataaataagcttttat 10658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 24625819 - 24625911
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| |||| ||||| | ||| |||| ||||  |||| |||| |||| |||||||||||||||||||||| |||| ||  ||||||||    
T  24625819 tttggattgtcttatttttgaggttaggcaagacaacatatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttat 24625911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 18327487 - 18327584
Alignment:
Q  123 acccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||| ||||||||| ||| |  ||||| |||||||  ||||| |||| ||||||||||||||||||| ||||||| ||||||| |||||||||    
T  18327487 acccgtttggattgacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttat 18327584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 1265811 - 1265719
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||||||| ||||| | ||||||||||||| ||||  |||   ||||| ||||||||||||||||||| ||||||||  ||||||||    
T  1265811 tttgaattgacttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagtttat 1265719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 10365162 - 10365231
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||||| |||||||||| ||||||||||||||| ||||| |||||||  ||||||||    
T  10365162 ttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttat 10365231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 10850166 - 10850097
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| | ||| || |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  10850166 ttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttat 10850097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 20169255 - 20169324
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| ||||||  ||||| |||| ||||||||||||||||||||| |||||||| | ||||||||||||    
T  20169255 ttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttat 20169324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 10082218 - 10082310
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||| |||||| ||||| |||| ||  |||||| ||||| |||| |||||| |||||||| ||||| |||||||||||||  ||||||||    
T  10082218 tttgaatggacttatttttgagtttttgtgaaacaacttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttat 10082310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 37712036 - 37712127
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||| ||| ||||| | | ||| |||||| |||||| ||||||||||||||||||||| |||||||||| |||||||  ||||||||    
T  37712036 tttggattgatttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgta-tattcataagcttgtcaaggtagtttat 37712127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 49738404 - 49738328
Alignment:
Q  143 ttttgggtttatgcaaaacaatttatgaaaatgaataa-gcttttatgtattattcataagtttgtcaatatagttt 218  Q
    ||||| |||||||||||||||  ||||||||| || || | ||||||| |||||||||||||||||||| |||||||    
T  49738404 ttttgagtttatgcaaaacaacatatgaaaataaaaaaagtttttatgaattattcataagtttgtcaaaatagttt 49738328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 6337837 - 6337782
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  6337837 ttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 6337782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 28689966 - 28690064
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaata--agcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| |||| |||| ||||  ||||||||| ||||  ||||| |||| ||||  || ||||||||||||||||||||||||||||  ||||||||    
T  28689966 cccatttggattggcttattttttagtttatgcagaacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttat 28690064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 391136 - 391225
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagc-ttttatgtattattcataagtttgtcaatatagt 216  Q
    |||| |||| |||| ||||| | ||||||||||||  ||||| |||| ||||||| |||||| ||||||||||||| |||||||| ||||    
T  391136 tttggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 4068126 - 4068175
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  4068126 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 4068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 26946227 - 26946130
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagc-ttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| ||||||||| ||||| | |||||||||||   ||||| |||| ||||||| |||||||| ||||||||||| |||| ||  ||||||||    
T  26946227 cccatttggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttat 26946130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 35590103 - 35590180
Alignment:
Q  133 attgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||||| ||||  | ||||| ||||||| ||||| |||| |||||||||||||||||  |||||||| |||||||    
T  35590103 attgacttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaa 35590180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 35897718 - 35897649
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| ||||| |||| |||||| |||||| ||||||||||||| || ||||  ||||||||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttat 35897649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 15515417 - 15515373
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||    
T  15515417 aataagcttttatgtattattcataagcttgtcaaggtagtttat 15515373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 16225477 - 16225553
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 204  Q
    |||| ||||||||| ||| | | |||||||||||| |||||| |||| |||||| |||||||||||| | |||||||    
T  16225477 tttggattgacttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagtt 16225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 41003381 - 41003437
Alignment:
Q  154 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||| || ||||| |||| |||||| |||||||||||||| |||||||||||||    
T  41003381 tgcaaaaaaacttatgcaaataaataagtttttatgtattatttataagtttgtcaa 41003437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 41196780 - 41196736
Alignment:
Q  176 aataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||    
T  41196780 aataagtttttatgtattattcataagcttgtcaatgtagtttat 41196736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 26542970 - 26543033
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||| ||||| |||| |||| |||||||||||||||  |||||||||| ||| ||||||||    
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttat 26543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 36423062 - 36423007
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| ||||||||||||| |||||||||||||||||| ||  ||||||||    
T  36423062 ttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttat 36423007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 46501090 - 46501027
Alignment:
Q  157 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||| |||| ||| ||||||| ||||||||| ||||| |||||| | ||||||||    
T  46501090 aaaacaatttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttat 46501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 51409788 - 51409733
Alignment:
Q  165 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||| |||| |||||| || |||||||||||||||||||||| ||| ||||||||    
T  51409788 ttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttat 51409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 39941463 - 39941501
Alignment:
Q  182 cttttatgtattattcataagtttgtcaatatagtttat 220  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  39941463 cttttatgtattattcataagcttgtcaaaatagtttat 39941501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 1565502 - 1565408
Alignment:
Q  124 cccatttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| |||||||||||| || | |||||  |||||  ||||| |||| || ||||||||||| ||||||| |||| |||||||  ||||||||    
T  1565502 cccatttggattgacttacttctgagcttatg--aaacagcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttat 1565408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 15631895 - 15631964
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||||||| ||||  |||| |||||| |||||||||||||| |||||||||| ||| || |||||    
T  15631895 ttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttat 15631964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 26988159 - 26988208
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  26988159 aaataaataagcttttatgtcttattcataagcttgtcaaggtagtttat 26988208  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 16889040 - 16889004
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  16889040 aaataaataagcttttatgtattattcataagcttgt 16889004  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 19284864 - 19284956
Alignment:
Q  128 tttgaattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||| ||||||||| | | ||||  ||||||  ||||  |||| |||||||| |||||||||||| |||||||||| || ||| |||||    
T  19284864 tttgaattaacttactttagagcttatataaaacagcttatataaataaataagctattatgtattatttataagtttgttaagatattttat 19284956  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 46689645 - 46689597
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcat 199  Q
    |||||||||||| |||||| |||| || |||||||||| ||||||||||    
T  46689645 ttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcat 46689597  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 24740 - 24795
Alignment:
Q  155 gcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 210  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  24740 gcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaa 24795  T

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Target: scaffold0332 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 14821 - 14772
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| |||||||||||||||||||||||||||||| | ||| ||||||||    
T  14821 aaataaataagcttttatgtattattcataagtttttaaatgtagtttat 14772  T

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Target: scaffold1088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 1266 - 1354
Alignment:
Q  132 aattgacttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||||||||| ||| | | ||||||||||||| ||||| |||||||||||  || || ||||||| |||||||||| ||  ||||||||    
T  1266 aattgacttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttat 1354  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 178498 - 178545
Alignment:
Q  158 aaacaatttatgaaaatgaataagcttttatgtattattcataagttt 205  Q
    |||||| ||||| |||| ||||||||||||||||||||| ||||||||    
T  178498 aaacaacttatgcaaataaataagcttttatgtattatttataagttt 178545  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 58943 - 58894
Alignment:
Q  171 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 220  Q
    |||| ||||| | |||||||||||||| ||||||||||||| ||||||||    
T  58943 aaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttat 58894  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 1049 - 1105
Alignment:
Q  151 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 207  Q
    |||| |||||||| ||||| |||| ||||||||||||| |||||| |||||| ||||    
T  1049 ttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgt 1105  T

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