View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12607_low_3 (Length: 347)
Name: NF12607_low_3
Description: NF12607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12607_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 21 - 333
Target Start/End: Original strand, 36176555 - 36176869
Alignment:
| Q |
21 |
attgtgtccgataaagaggaaaatttttaagaattgtttttcttttatcaaatgacataaatttctttaaaaatagtcattctatgggcagaaaatataa |
120 |
Q |
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| T |
36176555 |
attgtgtctgataaagtggaaaattttgaagaattgtttttcttttatcaaatgacataaatttctttaaaaatagtcattctatgggcagaaaatataa |
36176654 |
T |
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| Q |
121 |
catgaaaatcatgnnnnnnnnn--gttagtcaaaactttgtcataaacaatatgcttgatttgaatgtgcaagttacatcaaaatttgaaagtattatga |
218 |
Q |
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| T |
36176655 |
catgaaaatcatgtttttttttttgttagtcaaaactttgtcataaacaatatgcttgatttgaatgtgcaagttacatcaaaatttgaaagtattatga |
36176754 |
T |
|
| Q |
219 |
aggaaattcatcagtttactcatatgcattcgattggtataaattgatgggacaaaccgaacctaaactacttaaagtgtttacacaccgctttaaaatt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36176755 |
aggaaattcatcagtttactcatatgcattcgattgatataaattgatgggacaaaccgaacctaaactacttaaagtgtttacacaccgctttaaaatt |
36176854 |
T |
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| Q |
319 |
tatgtacaattgttc |
333 |
Q |
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||||||||||||||| |
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| T |
36176855 |
tatgtacaattgttc |
36176869 |
T |
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