View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12608_low_10 (Length: 250)
Name: NF12608_low_10
Description: NF12608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12608_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 36138673 - 36138917
Alignment:
| Q |
1 |
ttttgtttcttttgtctttaaactggtacgaagtaacatatgaaagtattacatacaagtccttctactgagacaaaattgggagtgaataatttccctt |
100 |
Q |
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| T |
36138673 |
ttttgtttcttttgtctttaaactggtacggagtaacatatgaaagtattacatacaagtccttctactgagacaaaattgggagtgaataatttccctt |
36138772 |
T |
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| Q |
101 |
ctttttatgttttcatcttcccttgtcttgtataagtgaaaacaatcactagtttgatatagcaattatcaaaactcatgcacgcctgtactcatctcca |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36138773 |
ctttttatgttctcatcttcccttgtcttgtataagtgaaaacaatcactagtttgatatagcaattatcaaaactcatgcacgcctgtactcatctcca |
36138872 |
T |
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| Q |
201 |
cagtcaccaatcactttaagaagatccttgcctttctctgctgct |
245 |
Q |
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|| ||||||||||||||||||||||||||||||||| |||||||| |
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| T |
36138873 |
caatcaccaatcactttaagaagatccttgcctttccctgctgct |
36138917 |
T |
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