View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12610_low_5 (Length: 274)

Name: NF12610_low_5
Description: NF12610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12610_low_5
NF12610_low_5
[»] chr6 (6 HSPs)
chr6 (101-264)||(15923802-15923980)
chr6 (18-103)||(15932252-15932337)
chr6 (103-253)||(7090675-7090825)
chr6 (111-249)||(10515822-10515960)
chr6 (105-246)||(15950469-15950610)
chr6 (105-246)||(23631255-23631396)
[»] chr7 (8 HSPs)
chr7 (101-264)||(19017277-19017440)
chr7 (101-262)||(665241-665402)
chr7 (114-249)||(32535250-32535385)
chr7 (105-218)||(15455502-15455615)
chr7 (105-246)||(29526497-29526638)
chr7 (101-155)||(21588403-21588457)
chr7 (109-143)||(27244312-27244346)
chr7 (115-164)||(21824128-21824177)
[»] chr8 (2 HSPs)
chr8 (115-260)||(3989173-3989318)
chr8 (101-261)||(7994839-7994999)
[»] chr5 (2 HSPs)
chr5 (103-243)||(31291390-31291528)
chr5 (109-250)||(11619432-11619573)
[»] chr4 (2 HSPs)
chr4 (171-264)||(20089344-20089437)
chr4 (105-246)||(47782660-47782801)
[»] chr1 (4 HSPs)
chr1 (105-246)||(26419044-26419185)
chr1 (105-246)||(32108095-32108236)
chr1 (174-250)||(21179841-21179917)
chr1 (108-246)||(11644480-11644618)
[»] chr3 (1 HSPs)
chr3 (112-157)||(20820477-20820522)


Alignment Details
Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 101 - 264
Target Start/End: Original strand, 15923802 - 15923980
Alignment:
Q  101 acaatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  15923802 acaatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggagtttgaaaatga 15923901  T
Q  201 ggc---------------atcaacattacatttatgtctaccgctccttggtttcctccatttgatatctatatctctg 264  Q
    |||               |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15923902 ggcatcaacattacatttatcaacattacatttatgtctaccgctccttggtttccaccatttgatatctatatctctg 15923980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 15932252 - 15932337
Alignment:
Q  18 ggttgttgatgttgttaaaatgtagaaagttcaatgtttgtataaagatgatattgtttgctaagcttcattttattaatgataca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15932252 ggttgttgatgttgttaaaatgtagaaagttcaatgtttgtataaagatgatattgtttgctaagcttcattttattaatgataca 15932337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 7090675 - 7090825
Alignment:
Q  103 aatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgagg 202  Q
    ||||| |||||||| ||| ||||||||   |||||||| ||| ||||||||||| || | |||||||| ||||||| |||  ||| ||| ||||| ||||    
T  7090675 aatggggtaaaccagatggtttttgagtaaacatggtttcctactgaatctcgagtgcatatgcctatacctaccttattattggagttagaaaatgagg 7090774  T
Q  203 catcaacattacatttatgtctaccgctccttggtttcctccatttgatat 253  Q
    ||||||||||||||||| | ||||| | | |||| ||| ||||| ||||||    
T  7090775 catcaacattacatttaagcctaccacacattggcttcttccatctgatat 7090825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 249
Target Start/End: Complemental strand, 10515960 - 10515822
Alignment:
Q  111 aaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggcatcaaca 210  Q
    |||||||||  |||||||||||||||| |||||  |||| ||||| ||| |||| |  | |||||||| |||  |||| |||| ||  ||||||||||||    
T  10515960 aaaccacattgtttttgagcggacatgattcccatctgagtctcggatgcacatacacaatcctaccttattagtggtatttggaatggaggcatcaaca 10515861  T
Q  211 ttacatttatgtctaccgctccttggtttcctccatttg 249  Q
    |||||||| | |||||| || || |||||||||||||||    
T  10515860 ttacatttgtatctaccacttctcggtttcctccatttg 10515822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 15950610 - 15950469
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| ||||||| ||||| ||||| ||| | ||||| |||||| |||| || || ||||| | ||||||||   | ||||| ||||||    
T  15950610 tggtgaaaaccacatggtttttgaccggacgtggtttccttccgaatcgcgaatgcacataccaatacctactttattgctggatgtagaaaaagaggca 15950511  T
Q  205 tcaacattacatttatgtctaccgctccttggtttcctccat 246  Q
    |||||||| |||||  |||| || |||||||| |||||||||    
T  15950510 tcaacattgcatttgagtcttccactccttggcttcctccat 15950469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 23631396 - 23631255
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| | ||||| || |||||||| ||| ||||||| |||||  | |||| ||| ||||| | ||| ||||   | ||||| ||| ||    
T  23631396 tggtgaaaaccacatggtctttgaacgaacatggtttccttctgaatcacgaatacatatgcatatgcctactttattactggatgtagaaaaagagaca 23631297  T
Q  205 tcaacattacatttatgtctaccgctccttggtttcctccat 246  Q
     ||||||| |||||  ||||||| ||||||||||||||||||    
T  23631296 acaacattgcatttgagtctaccactccttggtttcctccat 23631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 101 - 264
Target Start/End: Original strand, 19017277 - 19017440
Alignment:
Q  101 acaatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacga 200  Q
    |||||||||||| ||| ||| |||||||| |||||||||| |||||||||||| ||||| |||||| ||||||||||| ||||||   ||| ||||| ||    
T  19017277 acaatggtgtaatccaaatggtttttgagaggacatggtttcctgctgaatcttgaatgcacatgcatattcctaccttattgctatggttagaaaatga 19017376  T
Q  201 ggcatcaacattacatttatgtctaccgctccttggtttcctccatttgatatctatatctctg 264  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||  | ||||| ||||||||    
T  19017377 ggcatcaacattacatttaagtctaccgctccttggttccctccatcaggtatctctatctctg 19017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 101 - 262
Target Start/End: Original strand, 665241 - 665402
Alignment:
Q  101 acaatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacga 200  Q
    ||||||| || ||||||||  ||||||||| ||||||||| ||| |||||||||||||| |||| || | || ||||| |||||||||  ||||||| ||    
T  665241 acaatggagtgaaccacatagtttttgagcagacatggtttccttctgaatctcgaatgcacatacccaatcttaccttattgctggtagttgaaaaaga 665340  T
Q  201 ggcatcaacattacatttatgtctaccgctccttggtttcctccatttgatatctatatctc 262  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||||| |||||||||||||||    
T  665341 ggcatcaacattacatttaaatctaccgctccttagttccctccatctgatatctatatctc 665402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 32535250 - 32535385
Alignment:
Q  114 ccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggcatcaacatta 213  Q
    ||||||| ||||| ||| ||||||||| ||  |||| ||||| ||| |||| || | |||||||| ||||||||| |||||||| | ||||||||||||     
T  32535250 ccacatggttttttagcagacatggtttccatctgagtctcggatgcacatacccaatcctaccttattgctggtatttgaaaaggtggcatcaacattg 32535349  T
Q  214 catttatgtctaccgctccttggtttcctccatttg 249  Q
    ||||||| ||| || |||||  ||||||||||||||    
T  32535350 catttatatcttccactcctctgtttcctccatttg 32535385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 15455615 - 15455502
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| ||||||| ||||||||||| ||| | ||||| |||||| |||| || || ||||| | |||||| |   | ||||| ||||||    
T  15455615 tggtgaaaaccacatggtttttgaccggacatggtttccttccgaatcgcgaatgcacataccaatacctactttattgctagatgtagaaaaagaggca 15455516  T
Q  205 tcaacattacattt 218  Q
    |||||||| |||||    
T  15455515 tcaacattgcattt 15455502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 29526638 - 29526497
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| ||||||| ||||| || || ||| | ||||| |||||| |||| || || ||||| | ||||||||   | ||||| ||||||    
T  29526638 tggtgaaaaccacatggtttttgaccggacgtgatttccttccgaatcgcgaatgcacataccaatacctactttattgctggatgtagaaaaagaggca 29526539  T
Q  205 tcaacattacatttatgtctaccgctccttggtttcctccat 246  Q
    |||||||| |||||  |||| || ||| |||| |||||||||    
T  29526538 tcaacattgcatttgagtcttccactctttggcttcctccat 29526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 21588403 - 21588457
Alignment:
Q  101 acaatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcg 155  Q
    ||||||| || ||||| ||| |||||||||| |||||||| ||||||||||||||    
T  21588403 acaatggagtgaaccatatggtttttgagcgaacatggtttcctgctgaatctcg 21588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 27244312 - 27244346
Alignment:
Q  109 gtaaaccacatgatttttgagcggacatggttccc 143  Q
    ||||||||||||||||| |||||||||||||||||    
T  27244312 gtaaaccacatgattttagagcggacatggttccc 27244346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 21824177 - 21824128
Alignment:
Q  115 cacatgatttttgagcggacatggttccctgctgaatctcgaatgtacat 164  Q
    ||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  21824177 cacatgattttagagcggacatggttcccatccgaatctcgaatgcacat 21824128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 260
Target Start/End: Complemental strand, 3989318 - 3989173
Alignment:
Q  115 cacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggcatcaacattac 214  Q
    |||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||| |||| |||| |||  || ||||| ||||||||||||||||    
T  3989318 cacatggtttttgagcggacatggtttcttgctgaatctcgaatgcacatgcctattccgaccttattgttggaattagaaaaagaggcatcaacattac 3989219  T
Q  215 atttatgtctaccgctccttggtttcctccatttgatatctatatc 260  Q
    | |||  |||||||| |||||||||||||||| |||||||| ||||    
T  3989218 agttaattctaccgcaccttggtttcctccatctgatatctctatc 3989173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 7994999 - 7994839
Alignment:
Q  101 acaatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacga 200  Q
    ||||||| || ||||||| | ||||| ||||||||||||| |||||||||||||||||| ||||||| | || ||||| ||||||| | |||||||| ||    
T  7994999 acaatggagtgaaccacagggttttttagcggacatggtttcctgctgaatctcgaatgcacatgcccaatcttaccttattgctgctatttgaaaaaga 7994900  T
Q  201 ggcatcaacattacatttatgtctaccgctccttggtttcctccatttgatatctatatct 261  Q
     ||| ||||||||||||||  | | ||||||||||||||||||||| |||| |||||||||    
T  7994899 tgcaacaacattacatttaaatatgccgctccttggtttcctccatctgatgtctatatct 7994839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 31291528 - 31291390
Alignment:
Q  103 aatggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgagg 202  Q
    ||||| ||||| |||||  |||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||     | ||||| ||||    
T  31291528 aatggcgtaaaacacattgtttttgagcgaacatggctccctactgaatctcgaatgtacatgcctattcctaccttattgct--aaatagaaaaagagg 31291431  T
Q  203 catcaacattacatttatgtctaccgctccttggtttcctc 243  Q
    ||| ||||||||||||| ||||| |||| |||||| |||||    
T  31291430 cattaacattacatttaagtctatcgcttcttggtatcctc 31291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 11619432 - 11619573
Alignment:
Q  109 gtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggcatcaa 208  Q
    |||||||||||  |||| |||| |||||| |||||  |||| ||||| ||| |||| || | |||||||| |||||  || |||||||| || |||| ||    
T  11619432 gtaaaccacattgttttagagcagacatgattcccatctgagtctcggatgcacattccaaatcctaccttattgcaagtatttgaaaaagaagcataaa 11619531  T
Q  209 cattacatttatgtctaccgctccttggtttcctccatttga 250  Q
    |||| ||||| | ||| || ||||| ||||||||||| ||||    
T  11619532 cattgcatttgtatcttcccctcctgggtttcctccaattga 11619573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 20089344 - 20089437
Alignment:
Q  171 tcctacctcattgctggtgtttgaaaacgaggcatcaacattacatttatgtctaccgctccttggtttcctccatttgatatctatatctctg 264  Q
    |||||||| ||||  ||| |||||||| |||||||| || |||||||||   |||||||||||||||||||||||| | || ||||||||||||    
T  20089344 tcctaccttattgtcggtatttgaaaaagaggcatccacgttacatttaaacctaccgctccttggtttcctccatctaatgtctatatctctg 20089437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 47782801 - 47782660
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| |||||||  |||| ||||| ||| | ||||| |||||| |||| || || ||||| | ||||||||   | ||||| ||||||    
T  47782801 tggtgaaaaccacatggtttttgactggacgtggtttccttccgaatcgcgaatgcacataccaatacctactttattgctggatgtagaaaaagaggca 47782702  T
Q  205 tcaacattacatttatgtctaccgctccttggtttcctccat 246  Q
    |||||||| |||||  |||| || |||||||| |||||||||    
T  47782701 tcaacattgcatttgagtcttccactccttggcttcctccat 47782660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 26419044 - 26419185
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| ||||||| ||||| ||||| ||| | ||||| |||||| |||| || || ||||| | ||||||||   | ||||| ||||||    
T  26419044 tggtgaaaaccacatggtttttgaccggacgtggtttccttccgaatcgcgaatgcacataccaatacctactttattgctggatgtagaaaaagaggca 26419143  T
Q  205 tcaacattacatttatgtctaccgctccttggtttcctccat 246  Q
    |||||||| |||||  |||| || |||||||| |||||||||    
T  26419144 tcaacattgcatttgagtcttccactccttggcttcctccat 26419185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 32108236 - 32108095
Alignment:
Q  105 tggtgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggca 204  Q
    ||||| |||||||||| |||||||  |||| ||||| ||| | ||||| |||||| |||| || || ||||| | ||||||||   | ||||| ||||||    
T  32108236 tggtgaaaaccacatggtttttgacgggacgtggtttccttccgaatcgcgaatgcacataccaatacctactttattgctggatgtagaaaaagaggca 32108137  T
Q  205 tcaacattacatttatgtctaccgctccttggtttcctccat 246  Q
    |||||||| |||||  |||| || |||||||| |||||||||    
T  32108136 tcaacattgcatttgagtcttccactccttggcttcctccat 32108095  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 21179917 - 21179841
Alignment:
Q  174 tacctcattgctggtgtttgaaaacgaggcatcaacattacatttatgtctaccgctccttggtttcctccatttga 250  Q
    ||||| |||| |||| |||||||| |||||||||||||| ||||| | ||| || ||||| ||||||||||||||||    
T  21179917 taccttattgatggtatttgaaaatgaggcatcaacattgcatttgtatcttcccctcctgggtttcctccatttga 21179841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 11644618 - 11644480
Alignment:
Q  108 tgtaaaccacatgatttttgagcggacatggttccctgctgaatctcgaatgtacatgcctattcctacctcattgctggtgtttgaaaacgaggcatca 207  Q
    ||||||||||||  |||| ||||||| ||| |||||   ||| ||||| ||| |||| || | |||||||| |||  |||| |||||||| ||||||||     
T  11644618 tgtaaaccacattgttttagagcggatatgattcccatatgagtctcggatgcacattcccaatcctaccttatttgtggtatttgaaaaggaggcatcg 11644519  T
Q  208 acattacatttatgtctaccgctccttggtttcctccat 246  Q
    | ||| ||||||| ||| || || || ||||||||||||    
T  11644518 atattgcatttatatctgccacttctcggtttcctccat 11644480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 20820522 - 20820477
Alignment:
Q  112 aaccacatgatttttgagcggacatggttccctgctgaatctcgaa 157  Q
    ||||||||| ||||||||||||| ||||| | ||||||||||||||    
T  20820522 aaccacatggtttttgagcggacttggtttcatgctgaatctcgaa 20820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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