View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12610_low_6 (Length: 243)
Name: NF12610_low_6
Description: NF12610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12610_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 47266408 - 47266192
Alignment:
| Q |
18 |
gtaaactaaagtatccccatacagtacacaactgctgagaccaatctctcgagataattaagatcctttttagcagttgatctctcctaaaatatgtttt |
117 |
Q |
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| T |
47266408 |
gtaaactaaagtatccccatacagtacacaactgttgagaccaatctctcgagataattaagatcctttttagcagttgatctctcctaaaatatgtttt |
47266309 |
T |
|
| Q |
118 |
ccatacacactaacaaggaattgaatccccgactaaattattaaggcacccaaacctataatacttgtgtcacactagattggtattagaagttagaacc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
47266308 |
ccatacacactaacaaggaattgaatccccgactaaattattaaggcacccaaacctataatacttgtgtcacactagatcggtattagaagttagaacc |
47266209 |
T |
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| Q |
218 |
atatatagctttacctc |
234 |
Q |
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||||||||||||||||| |
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| T |
47266208 |
atatatagctttacctc |
47266192 |
T |
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