View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12611_low_28 (Length: 372)

Name: NF12611_low_28
Description: NF12611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12611_low_28
NF12611_low_28
[»] chr5 (27 HSPs)
chr5 (2-357)||(27270410-27270778)
chr5 (2-47)||(27270124-27270169)
chr5 (2-47)||(27270269-27270314)
chr5 (141-186)||(25175262-25175307)
chr5 (142-186)||(15735704-15735748)
chr5 (142-186)||(20595832-20595876)
chr5 (142-186)||(20602118-20602162)
chr5 (142-186)||(20608409-20608453)
chr5 (142-186)||(22317514-22317558)
chr5 (142-186)||(25006809-25006853)
chr5 (142-186)||(25116172-25116216)
chr5 (142-186)||(30759656-30759700)
chr5 (150-212)||(26306847-26306909)
chr5 (142-183)||(22855734-22855775)
chr5 (142-186)||(18073070-18073114)
chr5 (142-186)||(18484213-18484257)
chr5 (142-186)||(20790715-20790759)
chr5 (150-186)||(21387568-21387604)
chr5 (142-186)||(23600637-23600681)
chr5 (142-186)||(23748221-23748265)
chr5 (142-186)||(24219916-24219960)
chr5 (142-186)||(24940704-24940748)
chr5 (142-186)||(24953175-24953219)
chr5 (150-186)||(26847822-26847858)
chr5 (142-188)||(17412740-17412786)
chr5 (183-253)||(28360054-28360124)
chr5 (142-183)||(20444843-20444884)
[»] chr2 (25 HSPs)
chr2 (6-335)||(19805470-19805816)
chr2 (144-257)||(17334535-17334648)
chr2 (142-186)||(5500266-5500310)
chr2 (142-186)||(22665232-22665276)
chr2 (142-186)||(23159386-23159430)
chr2 (142-186)||(23570643-23570687)
chr2 (142-186)||(23644115-23644159)
chr2 (142-186)||(24171516-24171560)
chr2 (142-186)||(25144758-25144802)
chr2 (142-186)||(25804268-25804312)
chr2 (142-186)||(27631666-27631710)
chr2 (142-186)||(27768817-27768861)
chr2 (142-186)||(16775821-16775865)
chr2 (142-186)||(17590577-17590621)
chr2 (142-186)||(22044661-22044705)
chr2 (142-186)||(24795286-24795330)
chr2 (142-186)||(25357681-25357725)
chr2 (142-182)||(25370890-25370930)
chr2 (142-186)||(27627751-27627795)
chr2 (153-186)||(24178194-24178227)
chr2 (142-183)||(24321339-24321380)
chr2 (142-186)||(11616-11660)
chr2 (142-186)||(117713-117757)
chr2 (142-186)||(23798923-23798967)
chr2 (142-186)||(24506820-24506864)
[»] chr3 (42 HSPs)
chr3 (182-343)||(1735670-1735831)
chr3 (142-186)||(3245589-3245633)
chr3 (142-186)||(3339227-3339271)
chr3 (142-186)||(4382916-4382960)
chr3 (142-186)||(10546937-10546981)
chr3 (142-186)||(10602473-10602517)
chr3 (142-186)||(12160208-12160252)
chr3 (142-186)||(12776535-12776579)
chr3 (142-186)||(13001426-13001470)
chr3 (142-186)||(13136211-13136255)
chr3 (142-186)||(13504882-13504926)
chr3 (142-186)||(14348589-14348633)
chr3 (142-186)||(15946779-15946823)
chr3 (142-186)||(20584273-20584317)
chr3 (142-186)||(27356729-27356773)
chr3 (142-186)||(3279354-3279398)
chr3 (142-186)||(7600525-7600569)
chr3 (142-186)||(9360972-9361016)
chr3 (142-186)||(10160174-10160218)
chr3 (142-186)||(11398379-11398423)
chr3 (142-186)||(11947577-11947621)
chr3 (142-186)||(12187077-12187121)
chr3 (142-186)||(13187418-13187462)
chr3 (142-186)||(13195459-13195503)
chr3 (142-186)||(13601232-13601276)
chr3 (142-186)||(14445769-14445813)
chr3 (150-186)||(15556943-15556979)
chr3 (142-186)||(15619284-15619328)
chr3 (142-186)||(15645171-15645215)
chr3 (142-186)||(16373566-16373610)
chr3 (142-186)||(16448761-16448805)
chr3 (142-186)||(17388000-17388044)
chr3 (142-186)||(20156516-20156559)
chr3 (142-186)||(37942548-37942592)
chr3 (142-188)||(12193489-12193535)
chr3 (141-186)||(8686388-8686433)
chr3 (142-179)||(17045865-17045902)
chr3 (142-179)||(17048025-17048062)
chr3 (142-186)||(2721467-2721510)
chr3 (142-186)||(10147181-10147225)
chr3 (150-186)||(13068320-13068356)
chr3 (150-186)||(13097882-13097918)
[»] chr4 (25 HSPs)
chr4 (183-343)||(13898599-13898759)
chr4 (183-341)||(48085559-48085717)
chr4 (142-186)||(10630920-10630964)
chr4 (142-186)||(11496615-11496659)
chr4 (142-186)||(13823083-13823127)
chr4 (142-186)||(14653999-14654043)
chr4 (142-186)||(15254518-15254562)
chr4 (142-186)||(17484911-17484955)
chr4 (142-186)||(18081460-18081504)
chr4 (183-255)||(18273304-18273376)
chr4 (142-186)||(38426893-38426937)
chr4 (142-186)||(42709732-42709776)
chr4 (142-186)||(56580540-56580584)
chr4 (142-185)||(15865658-15865701)
chr4 (143-201)||(14233258-14233316)
chr4 (182-255)||(20958735-20958808)
chr4 (142-186)||(3354810-3354854)
chr4 (142-186)||(10650558-10650602)
chr4 (142-186)||(15260110-15260154)
chr4 (142-186)||(15409540-15409584)
chr4 (142-186)||(16682924-16682968)
chr4 (142-188)||(17296248-17296294)
chr4 (152-186)||(18292118-18292152)
chr4 (142-186)||(9488879-9488923)
chr4 (150-186)||(45234233-45234269)
[»] chr1 (16 HSPs)
chr1 (183-335)||(27775944-27776095)
chr1 (144-201)||(18478219-18478276)
chr1 (142-186)||(17094602-17094646)
chr1 (142-186)||(19364199-19364243)
chr1 (142-186)||(20237626-20237670)
chr1 (142-186)||(27047044-27047088)
chr1 (142-186)||(52938622-52938666)
chr1 (142-183)||(8653286-8653327)
chr1 (142-183)||(19875648-19875689)
chr1 (142-186)||(14070675-14070719)
chr1 (142-186)||(21784473-21784517)
chr1 (142-186)||(21798663-21798707)
chr1 (142-184)||(16382578-16382620)
chr1 (142-186)||(3990109-3990153)
chr1 (142-186)||(4027850-4027894)
chr1 (150-186)||(8947516-8947552)
[»] scaffold0323 (1 HSPs)
scaffold0323 (182-335)||(6426-6578)
[»] chr7 (37 HSPs)
chr7 (183-341)||(25752025-25752183)
chr7 (151-257)||(1826264-1826370)
chr7 (182-255)||(19690044-19690117)
chr7 (142-186)||(538756-538800)
chr7 (142-186)||(825794-825838)
chr7 (142-186)||(4312727-4312771)
chr7 (142-186)||(8718035-8718079)
chr7 (142-186)||(9583063-9583107)
chr7 (142-186)||(11921308-11921352)
chr7 (142-186)||(13658036-13658080)
chr7 (142-186)||(14221719-14221763)
chr7 (142-186)||(14551269-14551313)
chr7 (142-186)||(15065939-15065983)
chr7 (142-186)||(15916777-15916821)
chr7 (142-186)||(16119850-16119894)
chr7 (142-186)||(16465617-16465661)
chr7 (142-186)||(18287772-18287816)
chr7 (142-186)||(27291507-27291551)
chr7 (144-198)||(15940731-15940785)
chr7 (142-183)||(23515237-23515278)
chr7 (142-186)||(4461243-4461287)
chr7 (142-186)||(5397286-5397330)
chr7 (150-186)||(8780937-8780973)
chr7 (150-186)||(9264940-9264976)
chr7 (142-186)||(12548806-12548850)
chr7 (142-186)||(12567184-12567228)
chr7 (142-186)||(13674026-13674070)
chr7 (150-186)||(15206585-15206621)
chr7 (142-186)||(16532266-16532310)
chr7 (142-186)||(16633352-16633396)
chr7 (142-186)||(18593353-18593397)
chr7 (142-186)||(18618287-18618331)
chr7 (142-186)||(48801777-48801821)
chr7 (145-188)||(4791381-4791424)
chr7 (142-185)||(9004122-9004165)
chr7 (142-186)||(9194545-9194589)
chr7 (142-186)||(20108539-20108583)
[»] scaffold0035 (2 HSPs)
scaffold0035 (144-201)||(88346-88403)
scaffold0035 (142-186)||(50507-50551)
[»] scaffold0029 (2 HSPs)
scaffold0029 (144-198)||(77379-77433)
scaffold0029 (142-186)||(123539-123583)
[»] scaffold0011 (3 HSPs)
scaffold0011 (142-188)||(172272-172318)
scaffold0011 (142-186)||(162013-162057)
scaffold0011 (142-186)||(164404-164448)
[»] scaffold0158 (1 HSPs)
scaffold0158 (144-201)||(31415-31472)
[»] scaffold0096 (1 HSPs)
scaffold0096 (141-186)||(38509-38554)
[»] scaffold0974 (1 HSPs)
scaffold0974 (142-186)||(1273-1317)
[»] scaffold0861 (1 HSPs)
scaffold0861 (142-186)||(925-969)
[»] scaffold0773 (1 HSPs)
scaffold0773 (142-186)||(642-686)
[»] scaffold0582 (1 HSPs)
scaffold0582 (142-186)||(8824-8868)
[»] scaffold0566 (1 HSPs)
scaffold0566 (142-186)||(2773-2817)
[»] scaffold0512 (1 HSPs)
scaffold0512 (142-186)||(5250-5294)
[»] scaffold0375 (1 HSPs)
scaffold0375 (142-186)||(12749-12793)
[»] scaffold0230 (1 HSPs)
scaffold0230 (142-186)||(15848-15892)
[»] scaffold0156 (1 HSPs)
scaffold0156 (142-186)||(996-1040)
[»] scaffold0056 (1 HSPs)
scaffold0056 (142-186)||(42255-42299)
[»] scaffold0020 (1 HSPs)
scaffold0020 (142-186)||(121117-121161)
[»] chr8 (24 HSPs)
chr8 (142-186)||(11346954-11346998)
chr8 (142-186)||(19767695-19767739)
chr8 (142-186)||(20002285-20002329)
chr8 (142-186)||(20038982-20039026)
chr8 (142-186)||(21098795-21098839)
chr8 (142-186)||(21104116-21104160)
chr8 (142-186)||(21831187-21831231)
chr8 (142-186)||(21843525-21843569)
chr8 (142-186)||(22033556-22033600)
chr8 (142-186)||(22099656-22099700)
chr8 (142-186)||(22370113-22370157)
chr8 (144-198)||(19902162-19902216)
chr8 (142-186)||(23455108-23455153)
chr8 (142-186)||(8314638-8314682)
chr8 (142-186)||(16418621-16418665)
chr8 (142-186)||(17620916-17620960)
chr8 (142-186)||(21382264-21382308)
chr8 (142-186)||(21939997-21940041)
chr8 (142-186)||(22102563-22102607)
chr8 (142-186)||(22817761-22817805)
chr8 (142-186)||(23911610-23911654)
chr8 (142-186)||(24034185-24034229)
chr8 (142-186)||(8322847-8322891)
chr8 (142-186)||(20712604-20712648)
[»] chr6 (24 HSPs)
chr6 (142-186)||(2181224-2181268)
chr6 (142-186)||(15699725-15699769)
chr6 (142-186)||(18448304-18448348)
chr6 (142-186)||(22165550-22165594)
chr6 (142-186)||(22243982-22244026)
chr6 (142-186)||(23023257-23023301)
chr6 (142-186)||(25963412-25963456)
chr6 (142-186)||(25968059-25968103)
chr6 (142-186)||(30671808-30671852)
chr6 (142-183)||(20107784-20107825)
chr6 (141-186)||(29595858-29595903)
chr6 (142-186)||(18184875-18184919)
chr6 (142-186)||(20170413-20170457)
chr6 (142-186)||(21560555-21560599)
chr6 (142-186)||(22061504-22061548)
chr6 (142-186)||(22767117-22767161)
chr6 (142-186)||(24855246-24855290)
chr6 (150-186)||(25631270-25631306)
chr6 (142-186)||(35270983-35271027)
chr6 (183-237)||(7435216-7435270)
chr6 (142-186)||(11204015-11204059)
chr6 (142-186)||(18731886-18731930)
chr6 (142-186)||(18854181-18854225)
chr6 (142-186)||(25625854-25625898)
[»] scaffold0031 (1 HSPs)
scaffold0031 (143-186)||(22774-22817)
[»] scaffold0258 (1 HSPs)
scaffold0258 (142-183)||(22159-22200)
[»] scaffold0215 (1 HSPs)
scaffold0215 (141-186)||(616-661)
[»] scaffold0123 (1 HSPs)
scaffold0123 (141-186)||(18217-18262)
[»] scaffold0679 (1 HSPs)
scaffold0679 (142-186)||(8104-8148)
[»] scaffold0506 (1 HSPs)
scaffold0506 (142-186)||(2288-2332)
[»] scaffold0420 (1 HSPs)
scaffold0420 (142-186)||(10207-10251)
[»] scaffold0404 (2 HSPs)
scaffold0404 (142-186)||(3479-3523)
scaffold0404 (142-186)||(1208-1252)
[»] scaffold0384 (1 HSPs)
scaffold0384 (142-186)||(10731-10775)
[»] scaffold0162 (1 HSPs)
scaffold0162 (142-186)||(35105-35149)
[»] scaffold0116 (1 HSPs)
scaffold0116 (142-186)||(37744-37788)
[»] scaffold0113 (1 HSPs)
scaffold0113 (142-186)||(383-427)
[»] scaffold0089 (1 HSPs)
scaffold0089 (142-186)||(54850-54894)
[»] scaffold0034 (1 HSPs)
scaffold0034 (150-186)||(58629-58665)
[»] scaffold0032 (1 HSPs)
scaffold0032 (142-186)||(97727-97771)
[»] scaffold0026 (1 HSPs)
scaffold0026 (142-186)||(11219-11263)
[»] scaffold0059 (1 HSPs)
scaffold0059 (150-185)||(12574-12609)
[»] scaffold0013 (1 HSPs)
scaffold0013 (150-185)||(232789-232824)
[»] scaffold0004 (1 HSPs)
scaffold0004 (143-186)||(251871-251914)
[»] scaffold0226 (1 HSPs)
scaffold0226 (144-198)||(3251-3305)
[»] scaffold0094 (1 HSPs)
scaffold0094 (142-188)||(1204-1250)
[»] scaffold1225 (1 HSPs)
scaffold1225 (142-186)||(1857-1901)
[»] scaffold0825 (1 HSPs)
scaffold0825 (142-186)||(2853-2897)
[»] scaffold0328 (1 HSPs)
scaffold0328 (142-186)||(511-555)
[»] scaffold0315 (1 HSPs)
scaffold0315 (150-186)||(14663-14699)
[»] scaffold0278 (1 HSPs)
scaffold0278 (150-186)||(13003-13039)
[»] scaffold0117 (1 HSPs)
scaffold0117 (142-186)||(45229-45273)
[»] scaffold0037 (2 HSPs)
scaffold0037 (142-186)||(72573-72617)
scaffold0037 (142-186)||(84763-84807)


Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 2 - 357
Target Start/End: Original strand, 27270410 - 27270778
Alignment:
Q  2 cacacactcacttgaaactgttgtagggttgatgtgatccttgaaaagtgtttaggttgtgataagtgcatcctgagaacaaagc--------------- 86  Q
    ||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||                   
T  27270410 cacacactcacttgaaactgttgtagggttgatgtg-----tgaaaagtgtttaggttgtgataagtgcatcctgagaacaaagccttgaaaaataaaaa 27270504  T
Q  87 ---aattggtttttagttcattctgtttttctgaattatgttgttgtcgtcccttggtttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27270505 tgcaattggtttttagttcattctgtttttctgaattatgttgttgtcgtcccttggtttttgcttgaggacaagcaatgattcaagtgtgggggagttt 27270604  T
Q  184 gataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtgtt 283  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  27270605 gataacacgcaaaatacattgtctaaataaatttatttttatttattttagggttgtttattgtgttttgcatgttttatggctagtatttcgttgtgtt 27270704  T
Q  284 tcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagagcaacttgaaccagtcaatgatg 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27270705 tcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagagcaacttgaaccagccaatgatg 27270778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27270124 - 27270169
Alignment:
Q  2 cacacactcacttgaaactgttgtagggttgatgtgatccttgaaa 47  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  27270124 cacacactcacttgaaactgttgtagggttgatgtgatccatgaaa 27270169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27270269 - 27270314
Alignment:
Q  2 cacacactcacttgaaactgttgtagggttgatgtgatccttgaaa 47  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  27270269 cacacactcacttgaaactgttgtagggttgatgtgatccatgaaa 27270314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 25175307 - 25175262
Alignment:
Q  141 tttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  25175307 tttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25175262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15735704 - 15735748
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15735704 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15735748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20595876 - 20595832
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20595876 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20602162 - 20602118
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20602162 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20602118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20608453 - 20608409
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20608453 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22317558 - 22317514
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22317558 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22317514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 25006853 - 25006809
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25006853 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25006809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 25116216 - 25116172
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25116216 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25116172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 30759700 - 30759656
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  30759700 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 30759656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 26306909 - 26306847
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaatacattgtctaaata 212  Q
    ||||||||| |||| |||||||||| || |||||||||||||| |||||||| ||| ||||||    
T  26306909 gaggacaagtaatggttcaagtgtgaggtagtttgataacacgtaaaatacactgtttaaata 26306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 22855734 - 22855775
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  22855734 ttttgcttgaggacaagcaaagattcaagtgtgggggagttt 22855775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18073070 - 18073114
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  18073070 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 18073114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 18484257 - 18484213
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  18484257 ttttgcttgaggacaagcaaagattcaagtgttggggagtttgat 18484213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20790759 - 20790715
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  20790759 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 20790715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 21387568 - 21387604
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21387568 gaggacaagcaaagattcaagtgtgggggagtttgat 21387604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 23600681 - 23600637
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||    
T  23600681 ttttgcttgaggacaagcaaagattcaagtgtgggggaatttgat 23600637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 23748221 - 23748265
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  23748221 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 23748265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24219916 - 24219960
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| || |||||||||||||||||||||    
T  24219916 ttttgcttgaggacaagcaaagactcaagtgtgggggagtttgat 24219960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24940704 - 24940748
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  24940704 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 24940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 24953219 - 24953175
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  24953219 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 24953175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 26847822 - 26847858
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26847822 gaggacaagcaaagattcaagtgtgggggagtttgat 26847858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 17412740 - 17412786
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgataa 188  Q
    ||||||| || ||||| ||||||||||||| ||||||||||||||||    
T  17412740 ttttgcttgacgacaaacaatgattcaagtatgggggagtttgataa 17412786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 28360054 - 28360124
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttg 253  Q
    |||||||| |||||||||| ||||||||||  ||  |||| |||||||||||||||  ||||| |||||||    
T  28360054 tgataacatgcaaaatacactgtctaaatagtttgtttttcatttattttagagtcaattattttgttttg 28360124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 20444884 - 20444843
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||| ||| |||||||||||||||||||||    
T  20444884 ttttgcttgaggacaatcaaagattcaagtgtgggggagttt 20444843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 6 - 335
Target Start/End: Complemental strand, 19805816 - 19805470
Alignment:
Q  6 cactcacttgaaactgttgtagggttgatgtgatccttgaaaagtgtttaggttgtgataagtgcatcctgagaacaaagc------------------a 87  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||                  |    
T  19805816 cactcacttgaaattgttgtagggttgatgtgatccttgaaaagtgtttaggttgtgataagtgcaccctgagagcaaagccttgaaaaataaaaatgca 19805717  T
Q  88 attggtttttagttcattctgtttttctgaattatgttgttgtcgtcccttggtttttgctcgaggacaagcaatgattcaagtgtgggggagtttgata 187  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||||||||    
T  19805716 attgatttctagttcattctgtttttctgaattatgttgttgtcatcccttgctttttgcttgaggacaagcaatggttctagtgtgggggagtttgata 19805617  T
Q  188 acacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtgtttcag 287  Q
    |||||||||||||||||||||||||  |||||||||||| | ||||||||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||    
T  19805616 acacgcaaaatacattgtctaaatagtttaatttttattca-tttagagtcttttattgtgttttgtatgtcttctggctagtattttgttatgtttcag 19805518  T
Q  288 gtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagag 335  Q
    ||||| ||||||| |||  |||||||| ||||||||||||||||||||    
T  19805517 gtaacgagggtgttaaaagtaaaagaatcaagaaggaggtgaaaagag 19805470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 17334648 - 17334535
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgttta 243  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||| || | ||||| ||  ||||||||||||| |||| | ||| |||     
T  17334648 ttgcttgaggacaatcaatggttcaagtgtgggggagtttgataacaagcaaaatgcactatctaagtagcttaatttttatttgttttggggtcatttg 17334549  T
Q  244 ttgtgttttgcatg 257  Q
    | ||||||||||||    
T  17334548 tcgtgttttgcatg 17334535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 5500310 - 5500266
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  5500310 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 5500266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 22665232 - 22665276
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22665232 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22665276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 23159430 - 23159386
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  23159430 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 23159386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 23570687 - 23570643
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  23570687 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 23570643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 23644115 - 23644159
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  23644115 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 23644159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24171516 - 24171560
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  24171516 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 24171560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 25144802 - 25144758
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25144802 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25144758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 25804312 - 25804268
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25804312 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25804268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 27631666 - 27631710
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27631666 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 27631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 27768861 - 27768817
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27768861 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 27768817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 16775821 - 16775865
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  16775821 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 16775865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 17590577 - 17590621
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  17590577 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 17590621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22044705 - 22044661
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  22044705 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 22044661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 24795330 - 24795286
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  24795330 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 24795286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 25357681 - 25357725
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  25357681 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 25357725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 25370930 - 25370890
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtt 182  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  25370930 ttttgcttgaggacaagcaaagattcaagtgtgggggagtt 25370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 27627751 - 27627795
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  27627751 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 27627795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 24178227 - 24178194
Alignment:
Q  153 gacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||||| ||||||||||||||||||||||||    
T  24178227 gacaagcaaagattcaagtgtgggggagtttgat 24178194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 24321339 - 24321380
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| ||||||||| |||||||||||    
T  24321339 ttttgcttgaggacaagcaaagattcaagtatgggggagttt 24321380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 11660 - 11616
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||  ||||||||||||||||||||    
T  11660 ttttgcttgaggacaagcaaagaggcaagtgtgggggagtttgat 11616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 117713 - 117757
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||    
T  117713 ttttgcttgaggacaagcaaatatgcaagtgtgggggagtttgat 117757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 23798967 - 23798923
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| || ||| ||||||||||||||||||||||||    
T  23798967 ttttgcttgaggataatcaaagattcaagtgtgggggagtttgat 23798923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24506820 - 24506864
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||  || ||||||||||||||||||||||||    
T  24506820 ttttgcttgaggacaataaaagattcaagtgtgggggagtttgat 24506864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 6e-53; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 182 - 343
Target Start/End: Complemental strand, 1735831 - 1735670
Alignment:
Q  182 ttgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtg 281  Q
    |||| |||||||||||||| |||||||||||  |||||||||||||||||| | ||| |||||||||||||||||||||| | |||||||||||||||||    
T  1735831 ttgacaacacgcaaaatacgttgtctaaatagtttaatttttatttattttcgggtcatttattgtgttttgcatgtcttctagctagtatttcgttgtg 1735732  T
Q  282 tttcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagagcaacttga 343  Q
    ||||||||||| |||||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  1735731 tttcaggtaacgagggtgtcaaaagtaaaagaatcaagaagaaggtgaaaagagcaacttga 1735670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 3245633 - 3245589
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  3245633 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 3245589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 3339271 - 3339227
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  3339271 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 3339227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 4382916 - 4382960
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  4382916 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 4382960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 10546981 - 10546937
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  10546981 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 10546937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 10602517 - 10602473
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  10602517 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 10602473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 12160252 - 12160208
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  12160252 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 12160208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 12776579 - 12776535
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  12776579 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 12776535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 13001470 - 13001426
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  13001470 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 13001426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 13136255 - 13136211
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  13136255 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 13136211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 13504926 - 13504882
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  13504926 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 13504882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 14348633 - 14348589
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  14348633 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 14348589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15946779 - 15946823
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15946779 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15946823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20584273 - 20584317
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20584273 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 27356773 - 27356729
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27356773 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 27356729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 3279354 - 3279398
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||    
T  3279354 ttttgcttgaggacaaacaaagattcaagtgtgggggagtttgat 3279398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 7600525 - 7600569
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  7600525 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 7600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 9361016 - 9360972
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  9361016 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 9360972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 10160218 - 10160174
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  10160218 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 10160174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11398379 - 11398423
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  11398379 ttttgcttgaggacaagcaaatattcaagtgtgggggagtttgat 11398423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11947577 - 11947621
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||    
T  11947577 ttttgcttgaggacaagtaaagattcaagtgtgggggagtttgat 11947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 12187121 - 12187077
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  12187121 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 12187077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 13187462 - 13187418
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  13187462 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 13187418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 13195503 - 13195459
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||    
T  13195503 ttttgcttgaggacaagcaaagattcaagtgtgtgggagtttgat 13195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 13601232 - 13601276
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  13601232 ttttgcttgagaacaagcaaagattcaagtgtgggggagtttgat 13601276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 14445813 - 14445769
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||    
T  14445813 ttttgctttaggacaagcaaagattcaagtgtgggggagtttgat 14445769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 15556979 - 15556943
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15556979 gaggacaagcaaagattcaagtgtgggggagtttgat 15556943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 15619328 - 15619284
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||    
T  15619328 ttttgcttgaggacaagcaaagattcaagtgtggggcagtttgat 15619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15645171 - 15645215
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  15645171 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 15645215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16373610 - 16373566
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  16373610 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 16373566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16448805 - 16448761
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  16448805 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 16448761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 17388000 - 17388044
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||    
T  17388000 ttttgcttaaggacaagcaaagattcaagtgtgggggagtttgat 17388044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20156559 - 20156516
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20156559 ttttgcttgaggacaagcaa-gattcaagtgtgggggagtttgat 20156516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 37942548 - 37942592
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  37942548 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 37942592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 12193535 - 12193489
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgataa 188  Q
    ||||||| |||||||||||| |||||| || ||||||||||||||||    
T  12193535 ttttgcttgaggacaagcaaagattcaggtatgggggagtttgataa 12193489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 8686433 - 8686388
Alignment:
Q  141 tttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||| | |||||||||||| ||||||||| ||||||||||||||    
T  8686433 tttttgtttgaggacaagcaaagattcaagtatgggggagtttgat 8686388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 17045865 - 17045902
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtggggga 179  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  17045865 ttttgcttgaggacaagcaaagattcaagtgtggggga 17045902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 17048025 - 17048062
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtggggga 179  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  17048025 ttttgcttgaggacaagcaaagattcaagtgtggggga 17048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 2721467 - 2721510
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  2721467 ttttgcttgaggacaagcaaagattcaagtgt-ggggagtttgat 2721510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 10147181 - 10147225
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| || |||||| ||||||||||||||    
T  10147181 ttttgcttgaggacaagcaaagactcaagtatgggggagtttgat 10147225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 13068320 - 13068356
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||||| || ||||||||||||||||||||||||    
T  13068320 gaggacaagtaaagattcaagtgtgggggagtttgat 13068356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 13097882 - 13097918
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  13097882 gaggacaagcaaagattcaaatgtgggggagtttgat 13097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 13898759 - 13898599
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtgt 282  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||| | |||||||||| ||| |||    
T  13898759 tgataacacgcaaaatacattgtctaaatagtttaatttttattcattttagagtcttttattgtgttatgcatgtcttcttgctagtattttgttatgt 13898660  T
Q  283 ttcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagagcaacttga 343  Q
    |||||||||| |||||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  13898659 ttcaggtaacgagggtgtcaaaagtaaaagaatcaagaagaaggtgaaaagagcaacttga 13898599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 341
Target Start/End: Original strand, 48085559 - 48085717
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtgt 282  Q
    ||||||||||||||  ||| | | ||||||  |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| ||| |||    
T  48085559 tgataacacgcaaagcacactatttaaatagtttaatttttatttattttagggtcgtttcttgtgttttgcatgtcttctggctagtattttgttatgt 48085658  T
Q  283 ttcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagagcaactt 341  Q
    || ||||||  ||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  48085659 ttaaggtaatgagggtttcaaaagtaaaagaatcaagaaggaggtgaaaagagcaactt 48085717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 10630920 - 10630964
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  10630920 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 10630964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 11496659 - 11496615
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11496659 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 11496615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 13823083 - 13823127
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  13823083 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 13823127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 14654043 - 14653999
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  14654043 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 14653999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15254518 - 15254562
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15254518 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15254562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 17484955 - 17484911
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  17484955 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 17484911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 18081504 - 18081460
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18081504 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 18081460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 18273304 - 18273376
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgca 255  Q
    ||||||||||||||||||||||||||||||  ||  |||  |||||||||||||||  ||||| |||||||||    
T  18273304 tgataacacgcaaaatacattgtctaaatagtttgttttccatttattttagagtcaattattttgttttgca 18273376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 38426893 - 38426937
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  38426893 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 38426937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 42709776 - 42709732
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  42709776 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 42709732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 56580584 - 56580540
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  56580584 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 56580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 15865658 - 15865701
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttga 185  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  15865658 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttga 15865701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 14233258 - 14233316
Alignment:
Q  143 tttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaataca 201  Q
    |||||| |||||||||||||| ||||||| | |||||||||||||||| | ||||||||    
T  14233258 tttgcttgaggacaagcaatggttcaagtataggggagtttgataacatggaaaataca 14233316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 20958808 - 20958735
Alignment:
Q  182 ttgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgca 255  Q
    ||||||||| ||||||| || | ||||||||  ||| |||| |||||||||||||||  |||||||||||||||    
T  20958808 ttgataacatgcaaaatgcactatctaaatagtttatttttcatttattttagagtcaattattgtgttttgca 20958735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 3354810 - 3354854
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  3354810 ttttgcttgaggacaagcaactattcaagtgtgggggagtttgat 3354854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 10650558 - 10650602
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  10650558 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 10650602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 15260154 - 15260110
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  15260154 ttttgcttgaggaaaagcaaagattcaagtgtgggggagtttgat 15260110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15409540 - 15409584
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  15409540 ttttgcttgaggacaagcaaagattctagtgtgggggagtttgat 15409584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 16682924 - 16682968
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||    
T  16682924 ttttgcttgatgacaagcaaagattcaagtgtgggggagtttgat 16682968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 17296294 - 17296248
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgataa 188  Q
    ||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  17296294 ttttgcttgaggacaagcaaagattcaagcatgggggagtttgataa 17296248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 18292118 - 18292152
Alignment:
Q  152 ggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||| ||||||||||||||||||||||||    
T  18292118 ggacaagcaaagattcaagtgtgggggagtttgat 18292152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 9488923 - 9488879
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| |||| |||| ||||||||||||||    
T  9488923 ttttgcttgaggacaagcaaagattgaagtatgggggagtttgat 9488879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 45234269 - 45234233
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  45234269 gaggacaagcaaagattcaagtctgggggagtttgat 45234233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 335
Target Start/End: Complemental strand, 27776095 - 27775944
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtgt 282  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||| |||||| |||||||||||||| ||||||| |||||||||||| ||| |||    
T  27776095 tgataacacgcaaaatacattgtctaaatagtttaatttttattcattt-agagtcttttattgtgttttgtatgtcttctggctagtattttgttatgt 27775997  T
Q  283 ttcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagag 335  Q
    |||||||||| ||||||| |||  |||||||| ||||||||||||||||||||    
T  27775996 ttcaggtaacgagggtgttaaaagtaaaagaatcaagaaggaggtgaaaagag 27775944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 18478276 - 18478219
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaataca 201  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  18478276 ttgcttgaggacaagcaatggttcaagtgtaggggagtttgataacatgcaaaataca 18478219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 17094646 - 17094602
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  17094646 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 17094602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 19364199 - 19364243
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  19364199 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 19364243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20237626 - 20237670
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20237626 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20237670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 27047044 - 27047088
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27047044 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 27047088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 52938666 - 52938622
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  52938666 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 52938622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 8653286 - 8653327
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  8653286 ttttgcttgaggacaagcaaagattcaagtgtgggggagttt 8653327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 19875689 - 19875648
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  19875689 ttttgcttgaggacaagcaaagattcaagtgtgggggagttt 19875648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 14070675 - 14070719
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  14070675 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 14070719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21784517 - 21784473
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  21784517 ttttgcttgaggacaagcaaatattcaagtgtgggggagtttgat 21784473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21798707 - 21798663
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  21798707 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 21798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 16382620 - 16382578
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttg 184  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||    
T  16382620 ttttgcttgaggacaagcaaagattcaagtatgggggagtttg 16382578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 3990109 - 3990153
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||    
T  3990109 ttttgcttgaggacaaacaaagattcaagtatgggggagtttgat 3990153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 4027850 - 4027894
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| |||||| |||||||| |||||||||||||||    
T  4027850 ttttgcttgaggaaaagcaaagattcaagggtgggggagtttgat 4027894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 8947552 - 8947516
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||||| || ||||||||||||||||||||||||    
T  8947552 gaggacaagtaaagattcaagtgtgggggagtttgat 8947516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 182 - 335
Target Start/End: Complemental strand, 6578 - 6426
Alignment:
Q  182 ttgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtg 281  Q
    ||||||||| |||||||||||| | ||||||  |||||||||||||||||| | ||| |||||||||||||||||||||| || ||||||||||||||||    
T  6578 ttgataacatgcaaaatacattatgtaaatagtttaatttttatttattttggggtc-tttattgtgttttgcatgtcttctgtctagtatttcgttgtg 6480  T
Q  282 tttcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagag 335  Q
    ||| ||||||| ||||||||||| ||||||||  || |||||||||||||||||    
T  6479 ttttaggtaacgagggtgtcaaaaataaaagagtcatgaaggaggtgaaaagag 6426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 341
Target Start/End: Original strand, 25752025 - 25752183
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgcatgtcttatggctagtatttcgttgtgt 282  Q
    ||||||||||||||  ||| | | ||||||  |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| ||| |||    
T  25752025 tgataacacgcaaagcacactatttaaatagtttaatttttatttattttagggtcgtttcttgtgttttgcatgtcttctggctagtattttgttatgt 25752124  T
Q  283 ttcaggtaacaagggtgtcaaagataaaagaaccaagaaggaggtgaaaagagcaactt 341  Q
    |||||||||  ||||| |||||  |||||||| ||||||||||||||| ||||||||||    
T  25752125 ttcaggtaatgagggtttcaaaagtaaaagaatcaagaaggaggtgaagagagcaactt 25752183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 1826264 - 1826370
Alignment:
Q  151 aggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgtt 250  Q
    ||||||||||||  ||||||||| ||||| ||||||||||| ||||||||||||||||||||  || || |  |||| ||||||||||  |||||||||     
T  1826264 aggacaagcaattgttcaagtgtaggggactttgataacacacaaaatacattgtctaaatagcttgatatccatttgttttagagtcaattattgtgtc 1826363  T
Q  251 ttgcatg 257  Q
    |||||||    
T  1826364 ttgcatg 1826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 19690117 - 19690044
Alignment:
Q  182 ttgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagtcgtttattgtgttttgca 255  Q
    ||||||||| |||||||||||||||||||||  ||  |||| |||||||||||||||| |||||||||||||||    
T  19690117 ttgataacatgcaaaatacattgtctaaatagtttgtttttcatttattttagagtcgattattgtgttttgca 19690044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 538800 - 538756
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  538800 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 538756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 825794 - 825838
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  825794 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 825838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 4312727 - 4312771
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  4312727 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 4312771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 8718035 - 8718079
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  8718035 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 8718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 9583063 - 9583107
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  9583063 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 9583107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 11921352 - 11921308
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11921352 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 11921308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 13658036 - 13658080
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  13658036 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 13658080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 14221763 - 14221719
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  14221763 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 14221719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 14551269 - 14551313
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  14551269 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 14551313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15065939 - 15065983
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15065939 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 15916821 - 15916777
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15916821 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15916777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16119894 - 16119850
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  16119894 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 16119850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16465661 - 16465617
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  16465661 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 16465617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18287772 - 18287816
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18287772 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 18287816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 27291507 - 27291551
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27291507 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 27291551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 15940731 - 15940785
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaat 198  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||||| |||||    
T  15940731 ttgcttgaggacaagcaacggttcaagtgtaggggagtttgataacacgtaaaat 15940785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 23515237 - 23515278
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  23515237 ttttgcttgaggacaagcaaagattcaagtgtgggggagttt 23515278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 4461287 - 4461243
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  4461287 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 4461243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 5397286 - 5397330
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  5397286 ttttgcttgaggacaagcaaagattcaagtgtaggggagtttgat 5397330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 8780973 - 8780937
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8780973 gaggacaagcaaagattcaagtgtgggggagtttgat 8780937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 9264976 - 9264940
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9264976 gaggacaagcaaagattcaagtgtgggggagtttgat 9264940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 12548850 - 12548806
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  12548850 ttttgcttgaggacaagcaaagattcaagtgttggggagtttgat 12548806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 12567184 - 12567228
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  12567184 ttttgcttgaggacaagcaaaaattcaagtgtgggggagtttgat 12567228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 13674026 - 13674070
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  13674026 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 13674070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 15206621 - 15206585
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15206621 gaggacaagcaaagattcaagtgtgggggagtttgat 15206585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 16532266 - 16532310
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  16532266 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 16532310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16633396 - 16633352
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  16633396 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 16633352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 18593397 - 18593353
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  18593397 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 18593353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18618287 - 18618331
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  18618287 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 18618331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 48801821 - 48801777
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||    
T  48801821 ttttgcttgaggacaagaaaagattcaagtgtgggggagtttgat 48801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 4791424 - 4791381
Alignment:
Q  145 tgctcgaggacaagcaatgattcaagtgtgggggagtttgataa 188  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||    
T  4791424 tgcttgaggacaagcaaagattcaagtatgggggagtttgataa 4791381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 9004122 - 9004165
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttga 185  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||    
T  9004122 ttttgcttgaggacaaacaaagattcaagtgtgggggagtttga 9004165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 9194589 - 9194545
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||    
T  9194589 ttttgcttgaggacaaacaaagattcaagtatgggggagtttgat 9194545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20108539 - 20108583
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||  || ||||||||||||||||||||||||    
T  20108539 ttttgcttgaggacaataaaagattcaagtgtgggggagtttgat 20108583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 88403 - 88346
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaataca 201  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  88403 ttgcttgaggacaagcaatggttcaagtgtaggggagtttgataacatgcaaaataca 88346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 50551 - 50507
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  50551 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 50507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 77433 - 77379
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaat 198  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  77433 ttgcttgaggacaagcaatggttcaagtgtaggggagtttgataacacgtaaaat 77379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 123539 - 123583
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  123539 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 123583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 172272 - 172318
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgataa 188  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  172272 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgataa 172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 162013 - 162057
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  162013 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 162057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 164448 - 164404
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  164448 ttttgcttgaggataagcaaagattcaagtgtgggggagtttgat 164404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 31472 - 31415
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaataca 201  Q
    ||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  31472 ttgcttgaggacaagcaatggttcaagtttaggggagtttgataacatgcaaaataca 31415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 38554 - 38509
Alignment:
Q  141 tttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  38554 tttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 38509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 1273 - 1317
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  1273 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 925 - 969
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  925 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 642 - 686
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  642 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 8824 - 8868
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  8824 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 2773 - 2817
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  2773 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 2817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 5250 - 5294
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  5250 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 5294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 12749 - 12793
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  12749 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 12793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15848 - 15892
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15848 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 996 - 1040
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  996 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 42255 - 42299
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  42255 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 42299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 121117 - 121161
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  121117 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 121161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 11346998 - 11346954
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11346998 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 11346954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 19767695 - 19767739
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  19767695 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 19767739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20002285 - 20002329
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20002285 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20039026 - 20038982
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  20039026 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 20038982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21098839 - 21098795
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  21098839 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 21098795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21104160 - 21104116
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  21104160 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 21104116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 21831187 - 21831231
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  21831187 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 21831231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21843569 - 21843525
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  21843569 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 21843525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22033600 - 22033556
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22033600 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22033556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22099700 - 22099656
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22099700 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22099656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 22370113 - 22370157
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22370113 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22370157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 19902216 - 19902162
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaat 198  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||||| |||||    
T  19902216 ttgcttgaggacaagcaacggttcaagtgtaggggagtttgataacacgtaaaat 19902162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 23455108 - 23455153
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgt-gggggagtttgat 186  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  23455108 ttttgctcgaggacaagcaaagattcaagtgtggggggagtttgat 23455153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 8314638 - 8314682
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  8314638 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 8314682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16418665 - 16418621
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  16418665 ttttgcttgagaacaagcaaagattcaagtgtgggggagtttgat 16418621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 17620916 - 17620960
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  17620916 ttttgcttgaggacaagcaaaaattcaagtgtgggggagtttgat 17620960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 21382264 - 21382308
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  21382264 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 21382308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21940041 - 21939997
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  21940041 ttttgcttgagaacaagcaaagattcaagtgtgggggagtttgat 21939997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 22102563 - 22102607
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  22102563 ttttgcttgaggacaagcaaagattcaagtgtaggggagtttgat 22102607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 22817761 - 22817805
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  22817761 ttttgcttgaggaaaagcaaagattcaagtgtgggggagtttgat 22817805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 23911610 - 23911654
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  23911610 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 23911654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24034185 - 24034229
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||    
T  24034185 ttttgcttgtggacaagcaaagattcaagtgtgggggagtttgat 24034229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 8322891 - 8322847
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| || |||||||||||    
T  8322891 ttttgcttgaggacaagcaaagattcaagtatgagggagtttgat 8322847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20712604 - 20712648
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| |||| |||||| ||||||||||||    
T  20712604 ttttgcttgaggacaagcaaagatttaagtgtaggggagtttgat 20712648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 2181224 - 2181268
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  2181224 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 2181268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 15699725 - 15699769
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  15699725 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 15699769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18448304 - 18448348
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18448304 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 18448348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22165594 - 22165550
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22165594 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22165550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 22243982 - 22244026
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22243982 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 23023257 - 23023301
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  23023257 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 23023301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 25963412 - 25963456
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25963412 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25963456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 25968059 - 25968103
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25968059 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 25968103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 30671852 - 30671808
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  30671852 ttttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 30671808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 20107825 - 20107784
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  20107825 ttttgcttgaggacaagcaaagattcaagtgtgggggagttt 20107784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 29595858 - 29595903
Alignment:
Q  141 tttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||    
T  29595858 tttttgcttgaggacaagcaaagattcaagtgtgagggagtttgat 29595903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 18184919 - 18184875
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  18184919 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 18184875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20170413 - 20170457
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  20170413 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 20170457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21560599 - 21560555
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  21560599 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 21560555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22061548 - 22061504
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  22061548 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 22061504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22767161 - 22767117
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  22767161 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 22767117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 24855290 - 24855246
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  24855290 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 24855246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 25631306 - 25631270
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25631306 gaggacaagcaaagattcaagtgtgggggagtttgat 25631270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 35270983 - 35271027
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||    
T  35270983 ttttgcttgaggacaagcaaagattcaagtgtgggggtgtttgat 35271027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 7435270 - 7435216
Alignment:
Q  183 tgataacacgcaaaatacattgtctaaataaattaatttttatttattttagagt 237  Q
    |||||||| ||||| |||||||||||||||  ||| ||| |||||||||||||||    
T  7435270 tgataacatgcaaactacattgtctaaatagtttattttctatttattttagagt 7435216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11204015 - 11204059
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  ||| |||||||||||||||||||    
T  11204015 ttttgcttgaggacaagcaaatatttaagtgtgggggagtttgat 11204059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18731886 - 18731930
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||| | ||||||||||||| ||||||||||    
T  18731886 ttttgcttgaggacaagctaagattcaagtgtggaggagtttgat 18731930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18854181 - 18854225
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||| || ||||||||| ||||||||||||||    
T  18854181 ttttgcttgaggacaagaaaagattcaagtatgggggagtttgat 18854225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 25625854 - 25625898
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||||    
T  25625854 ttttgcttgaggacaagcaaaaattcaagtatgggggagtttgat 25625898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 22774 - 22817
Alignment:
Q  143 tttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  22774 tttgcttgaggacaagcaaagattcaagtgtgggggagtttgat 22817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 22200 - 22159
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagttt 183  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  22200 ttttgcttgaggacaagcaaagattcaagtgtgggggagttt 22159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 661 - 616
Alignment:
Q  141 tttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||    
T  661 tttttgctttaggacaagcaaagattcaagtgtgggggagtttgat 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 18217 - 18262
Alignment:
Q  141 tttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||    
T  18217 ttttttcttgaggacaagcaaagattcaagtgtgggggagtttgat 18262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 8104 - 8148
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||    
T  8104 ttttgcttgaagacaagcaaagattcaagtgtgggggagtttgat 8148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 2332 - 2288
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  2332 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 2288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 10251 - 10207
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  10251 ttttgcttgaggacaagcaaagattcaagtttgggggagtttgat 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 3479 - 3523
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  3479 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 3523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 1208 - 1252
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  1208 ttttgcttgaggaaaagcaaagattcaagtatgggggagtttgat 1252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 10731 - 10775
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| |||| |||||||||||||||||||    
T  10731 ttttgcttgaggacaagcaaagattaaagtgtgggggagtttgat 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 35149 - 35105
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||    
T  35149 ttttgcttgaggacaaggaaagattcaagtgtgggggagtttgat 35105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 37788 - 37744
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||    
T  37788 ttttgcttgaggacaagcaaagattcaagtgtgggggaatttgat 37744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 383 - 427
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  383 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 54894 - 54850
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||    
T  54894 ttttgcttgaggacaagcaaagattcaagcgtgggggagtttgat 54850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 58665 - 58629
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  58665 gaggacaagcaaagattcaagtgtgggggagtttgat 58629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 97771 - 97727
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||    
T  97771 ttttgctttaggacaagcaaagattcaagtgtgggggagtttgat 97727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11219 - 11263
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  11219 ttttgcttgaggacaagcaaagattcaagtatgggggagtttgat 11263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 12574 - 12609
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttga 185  Q
    |||||||||||| |||||||||||||||||||||||    
T  12574 gaggacaagcaaagattcaagtgtgggggagtttga 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 232824 - 232789
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttga 185  Q
    |||||||||||| |||||||||||||||||||||||    
T  232824 gaggacaagcaaagattcaagtgtgggggagtttga 232789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 251914 - 251871
Alignment:
Q  143 tttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||| ||||||||| || ||||||||||||||||||||||||    
T  251914 tttgcttgaggacaagtaaagattcaagtgtgggggagtttgat 251871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 3251 - 3305
Alignment:
Q  144 ttgctcgaggacaagcaatgattcaagtgtgggggagtttgataacacgcaaaat 198  Q
    ||||| |||||||||||| | ||||||||| |||||||||| ||||||| |||||    
T  3251 ttgcttgaggacaagcaacggttcaagtgtaggggagtttgttaacacgtaaaat 3305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 1204 - 1250
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgataa 188  Q
    ||||||| | |||||||||| ||||||||| ||||||||||||||||    
T  1204 ttttgcttgtggacaagcaaagattcaagtatgggggagtttgataa 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 1857 - 1901
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||| |||| ||| ||||||||||||||||||||||||    
T  1857 ttttgcttgagaacaatcaaagattcaagtgtgggggagtttgat 1901  T

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Target: scaffold0825 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 2897 - 2853
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||||||| ||||||||| || |||||||||||    
T  2897 ttttgcttgaggacaagcaaagattcaagtatgtgggagtttgat 2853  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 555 - 511
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||    
T  555 ttttgcttgaggacaaacaaagattcaagtatgggggagtttgat 511  T

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Target: scaffold0315 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 14699 - 14663
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  14699 gaggacaagcaaagattcaagtatgggggagtttgat 14663  T

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Target: scaffold0278 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 13039 - 13003
Alignment:
Q  150 gaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  13039 gaggacaagcaaagattcaagtgtggcggagtttgat 13003  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 45273 - 45229
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||| |||||||| |||||| |||||||||||||||||    
T  45273 ttttgcttgagaacaagcaaagattcaggtgtgggggagtttgat 45229  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 72617 - 72573
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| ||| || ||||||||||||||||||||||||    
T  72617 ttttgcttgaggaaaagtaaagattcaagtgtgggggagtttgat 72573  T

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Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 84807 - 84763
Alignment:
Q  142 ttttgctcgaggacaagcaatgattcaagtgtgggggagtttgat 186  Q
    ||||||| ||||| ||| || ||||||||||||||||||||||||    
T  84807 ttttgcttgaggaaaagtaaagattcaagtgtgggggagtttgat 84763  T

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