View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12611_low_45 (Length: 271)

Name: NF12611_low_45
Description: NF12611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12611_low_45
NF12611_low_45
[»] chr4 (32 HSPs)
chr4 (1-198)||(12570099-12570296)
chr4 (5-196)||(23843567-23843751)
chr4 (59-196)||(44675767-44675905)
chr4 (16-194)||(13569608-13569783)
chr4 (66-195)||(15125001-15125130)
chr4 (77-196)||(15093926-15094046)
chr4 (56-196)||(16356799-16356938)
chr4 (56-196)||(16487924-16488064)
chr4 (56-196)||(16348511-16348650)
chr4 (59-161)||(15353188-15353290)
chr4 (59-161)||(5338862-5338964)
chr4 (59-161)||(36133844-36133945)
chr4 (58-196)||(15121649-15121786)
chr4 (58-161)||(17810394-17810496)
chr4 (58-161)||(25555638-25555741)
chr4 (58-161)||(11250442-11250545)
chr4 (58-161)||(14757304-14757406)
chr4 (58-161)||(16351730-16351833)
chr4 (61-161)||(43256043-43256141)
chr4 (58-161)||(27534148-27534250)
chr4 (56-117)||(10712639-10712700)
chr4 (56-117)||(10926409-10926470)
chr4 (56-117)||(12487494-12487555)
chr4 (56-113)||(14954433-14954490)
chr4 (56-113)||(25689653-25689710)
chr4 (56-117)||(43256339-43256400)
chr4 (44-123)||(9556638-9556716)
chr4 (56-95)||(13812966-13813005)
chr4 (56-95)||(20157407-20157446)
chr4 (58-123)||(4561254-4561318)
chr4 (58-123)||(5756858-5756922)
chr4 (58-95)||(22634369-22634406)
[»] chr8 (35 HSPs)
chr8 (1-198)||(24755799-24755996)
chr8 (9-198)||(16184813-16185003)
chr8 (1-182)||(377356-377537)
chr8 (1-181)||(19259443-19259623)
chr8 (1-196)||(21168567-21168763)
chr8 (59-196)||(19983228-19983366)
chr8 (59-196)||(19899230-19899368)
chr8 (56-182)||(20465899-20466025)
chr8 (1-196)||(21161904-21162090)
chr8 (1-195)||(17353784-17353975)
chr8 (56-196)||(30643137-30643278)
chr8 (56-196)||(17926553-17926692)
chr8 (102-196)||(23776681-23776775)
chr8 (56-196)||(15602863-15603003)
chr8 (56-196)||(16410101-16410240)
chr8 (56-196)||(15611315-15611455)
chr8 (114-196)||(21395828-21395910)
chr8 (114-196)||(21790321-21790403)
chr8 (125-196)||(19976647-19976718)
chr8 (58-161)||(20856306-20856409)
chr8 (114-196)||(21389298-21389380)
chr8 (56-142)||(22010579-22010664)
chr8 (56-161)||(16861208-16861312)
chr8 (56-117)||(21828276-21828337)
chr8 (56-117)||(14398035-14398096)
chr8 (56-113)||(18862911-18862968)
chr8 (56-117)||(21410733-21410794)
chr8 (56-117)||(21805225-21805286)
chr8 (59-105)||(39094861-39094907)
chr8 (58-123)||(19278203-19278267)
chr8 (58-123)||(21972505-21972569)
chr8 (58-123)||(21976590-21976654)
chr8 (58-123)||(22111973-22112037)
chr8 (58-123)||(43251935-43251999)
chr8 (129-161)||(39094823-39094855)
[»] chr6 (46 HSPs)
chr6 (1-197)||(15894274-15894470)
chr6 (1-196)||(21739868-21740063)
chr6 (56-196)||(18907241-18907381)
chr6 (58-196)||(25642029-25642168)
chr6 (35-196)||(19863095-19863253)
chr6 (35-196)||(19873237-19873395)
chr6 (10-196)||(22438892-22439075)
chr6 (35-196)||(22334737-22334896)
chr6 (10-196)||(22432342-22432525)
chr6 (56-196)||(21834736-21834874)
chr6 (58-161)||(17804319-17804421)
chr6 (58-161)||(19790660-19790763)
chr6 (58-161)||(20907863-20907966)
chr6 (58-161)||(22863068-22863170)
chr6 (56-142)||(18180623-18180708)
chr6 (59-161)||(23657302-23657403)
chr6 (58-150)||(22429923-22430014)
chr6 (58-161)||(14472392-14472494)
chr6 (58-161)||(25767050-25767152)
chr6 (114-196)||(16523249-16523331)
chr6 (59-149)||(27567503-27567593)
chr6 (56-117)||(16760078-16760139)
chr6 (56-117)||(31478072-31478133)
chr6 (77-161)||(27415824-27415907)
chr6 (58-161)||(18955645-18955747)
chr6 (56-142)||(22408205-22408290)
chr6 (56-117)||(1644491-1644552)
chr6 (56-97)||(16523330-16523371)
chr6 (56-113)||(22948891-22948948)
chr6 (56-113)||(22952847-22952904)
chr6 (56-117)||(23414763-23414824)
chr6 (56-113)||(23871335-23871392)
chr6 (56-113)||(23875291-23875348)
chr6 (44-117)||(27416120-27416193)
chr6 (56-117)||(27556521-27556582)
chr6 (145-198)||(31164691-31164744)
chr6 (112-196)||(15041396-15041480)
chr6 (73-140)||(22059645-22059712)
chr6 (56-102)||(14472054-14472100)
chr6 (56-102)||(18956040-18956086)
chr6 (58-123)||(1644827-1644891)
chr6 (58-123)||(11566984-11567048)
chr6 (58-123)||(19870712-19870776)
chr6 (58-123)||(23395190-23395254)
chr6 (58-123)||(23990042-23990106)
chr6 (58-94)||(8243983-8244019)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-198)||(34754-34951)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-198)||(13921-14118)
[»] scaffold0158 (2 HSPs)
scaffold0158 (1-196)||(2917-3112)
scaffold0158 (1-196)||(6583-6778)
[»] chr3 (57 HSPs)
chr3 (1-196)||(15060369-15060564)
chr3 (1-198)||(23052921-23053119)
chr3 (1-182)||(16909827-16910008)
chr3 (11-196)||(15051603-15051788)
chr3 (1-196)||(14878351-14878548)
chr3 (1-182)||(16369485-16369666)
chr3 (5-196)||(17524998-17525186)
chr3 (1-127)||(12172881-12173007)
chr3 (1-196)||(23408513-23408705)
chr3 (56-191)||(322721-322856)
chr3 (56-196)||(18383763-18383903)
chr3 (1-196)||(23077324-23077509)
chr3 (56-196)||(12496388-12496527)
chr3 (56-196)||(19725758-19725898)
chr3 (56-196)||(11862923-11863063)
chr3 (56-188)||(11298383-11298514)
chr3 (43-155)||(11851698-11851810)
chr3 (58-161)||(1982692-1982794)
chr3 (59-161)||(3389817-3389919)
chr3 (59-172)||(12037823-12037936)
chr3 (59-161)||(3402837-3402939)
chr3 (58-182)||(327025-327148)
chr3 (58-161)||(11557266-11557369)
chr3 (58-161)||(11595020-11595123)
chr3 (58-161)||(15482785-15482887)
chr3 (58-161)||(20461382-20461484)
chr3 (102-182)||(856314-856394)
chr3 (58-161)||(7793231-7793333)
chr3 (58-161)||(14499450-14499552)
chr3 (62-148)||(2897718-2897803)
chr3 (112-178)||(14179624-14179690)
chr3 (143-194)||(15877676-15877727)
chr3 (35-142)||(15877947-15878051)
chr3 (58-161)||(30066071-30066173)
chr3 (58-161)||(42326074-42326177)
chr3 (58-156)||(55022992-55023089)
chr3 (58-161)||(11070193-11070295)
chr3 (58-161)||(11854858-11854960)
chr3 (56-117)||(4589035-4589096)
chr3 (56-117)||(5223182-5223243)
chr3 (56-117)||(12339584-12339645)
chr3 (56-113)||(15964755-15964812)
chr3 (56-113)||(15968679-15968736)
chr3 (56-113)||(15972603-15972660)
chr3 (56-117)||(19775551-19775612)
chr3 (56-117)||(37439898-37439959)
chr3 (58-161)||(11165411-11165513)
chr3 (58-161)||(11300393-11300495)
chr3 (56-117)||(11300692-11300753)
chr3 (56-117)||(15464983-15465044)
chr3 (56-95)||(14665531-14665570)
chr3 (58-123)||(7109823-7109887)
chr3 (58-123)||(7113758-7113822)
chr3 (58-123)||(22321789-22321853)
chr3 (58-123)||(22336844-22336908)
chr3 (58-123)||(27409564-27409628)
chr3 (58-123)||(28949849-28949913)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-196)||(6924-7119)
[»] chr1 (33 HSPs)
chr1 (1-196)||(6151933-6152128)
chr1 (1-196)||(22831224-22831418)
chr1 (5-196)||(42865057-42865241)
chr1 (1-184)||(21022716-21022899)
chr1 (1-196)||(21714631-21714823)
chr1 (56-182)||(22449126-22449252)
chr1 (56-196)||(18181967-18182107)
chr1 (59-161)||(18393845-18393947)
chr1 (35-196)||(20091319-20091477)
chr1 (77-198)||(21787886-21788008)
chr1 (59-161)||(45310248-45310350)
chr1 (56-161)||(3472807-3472911)
chr1 (59-149)||(8761526-8761616)
chr1 (58-142)||(24783001-24783084)
chr1 (58-161)||(45489624-45489727)
chr1 (112-196)||(48603706-48603790)
chr1 (58-161)||(3704946-3705049)
chr1 (58-161)||(16080326-16080428)
chr1 (56-142)||(17678488-17678573)
chr1 (58-161)||(1010845-1010947)
chr1 (77-161)||(33797674-33797757)
chr1 (58-161)||(36819190-36819292)
chr1 (56-117)||(1925391-1925452)
chr1 (56-117)||(20229071-20229132)
chr1 (56-117)||(20924405-20924466)
chr1 (112-195)||(22468543-22468626)
chr1 (64-117)||(33797408-33797461)
chr1 (58-123)||(16375378-16375442)
chr1 (84-161)||(19212015-19212091)
chr1 (58-123)||(20228729-20228793)
chr1 (58-123)||(21407477-21407541)
chr1 (58-123)||(52639663-52639727)
chr1 (214-254)||(22507876-22507916)
[»] scaffold0081 (3 HSPs)
scaffold0081 (1-196)||(14749-14945)
scaffold0081 (1-196)||(23764-23960)
scaffold0081 (1-196)||(39188-39384)
[»] chr2 (35 HSPs)
chr2 (1-196)||(24673654-24673849)
chr2 (35-196)||(22758561-22758719)
chr2 (58-196)||(22740806-22740945)
chr2 (77-196)||(22798972-22799092)
chr2 (1-196)||(23038116-23038308)
chr2 (70-196)||(21918162-21918288)
chr2 (56-188)||(25963571-25963702)
chr2 (58-188)||(22811765-22811896)
chr2 (59-162)||(40428597-40428700)
chr2 (1-88)||(45678074-45678161)
chr2 (35-185)||(23103253-23103400)
chr2 (83-196)||(23019552-23019666)
chr2 (102-196)||(40622054-40622148)
chr2 (58-161)||(25961416-25961518)
chr2 (58-161)||(19688638-19688740)
chr2 (58-161)||(24174932-24175035)
chr2 (58-161)||(24655220-24655323)
chr2 (78-188)||(37524820-37524929)
chr2 (58-161)||(24735525-24735627)
chr2 (59-160)||(21327449-21327550)
chr2 (119-196)||(45678001-45678078)
chr2 (58-161)||(10101527-10101629)
chr2 (62-161)||(24716412-24716510)
chr2 (59-160)||(21318518-21318619)
chr2 (62-117)||(41531266-41531321)
chr2 (56-117)||(30345253-30345314)
chr2 (62-161)||(24870016-24870115)
chr2 (56-117)||(1283172-1283233)
chr2 (56-117)||(31344995-31345056)
chr2 (73-140)||(44370201-44370268)
chr2 (58-123)||(12901432-12901496)
chr2 (58-123)||(15477725-15477789)
chr2 (58-123)||(24649479-24649543)
chr2 (58-123)||(27601918-27601982)
chr2 (58-123)||(41530930-41530994)
[»] scaffold0671 (1 HSPs)
scaffold0671 (1-196)||(6180-6376)
[»] chr5 (40 HSPs)
chr5 (1-196)||(23501191-23501387)
chr5 (1-196)||(23201445-23201642)
chr5 (59-196)||(14079283-14079421)
chr5 (4-196)||(23512186-23512380)
chr5 (56-196)||(21366512-21366652)
chr5 (77-196)||(21873402-21873522)
chr5 (35-196)||(37724019-37724177)
chr5 (44-196)||(20805669-20805820)
chr5 (101-196)||(26704244-26704339)
chr5 (101-196)||(26973977-26974072)
chr5 (44-161)||(20767091-20767207)
chr5 (56-161)||(23458721-23458825)
chr5 (56-161)||(23462982-23463086)
chr5 (102-182)||(18769864-18769944)
chr5 (114-182)||(22032507-22032575)
chr5 (58-161)||(123187-123289)
chr5 (58-161)||(12028446-12028549)
chr5 (56-161)||(23451477-23451581)
chr5 (58-161)||(24222009-24222112)
chr5 (58-182)||(23572215-23572338)
chr5 (58-149)||(22757258-22757349)
chr5 (56-117)||(11220531-11220592)
chr5 (56-117)||(11225117-11225178)
chr5 (56-117)||(11228940-11229001)
chr5 (56-117)||(11230929-11230990)
chr5 (58-161)||(15236662-15236764)
chr5 (77-156)||(18356468-18356546)
chr5 (56-117)||(11226950-11227011)
chr5 (56-117)||(18356075-18356136)
chr5 (56-117)||(20911097-20911158)
chr5 (56-115)||(10753147-10753206)
chr5 (62-117)||(40723849-40723904)
chr5 (59-125)||(17919069-17919134)
chr5 (58-98)||(17410562-17410602)
chr5 (56-95)||(24767493-24767532)
chr5 (58-101)||(31342258-31342301)
chr5 (58-123)||(20295969-20296033)
chr5 (77-166)||(20910677-20910765)
chr5 (58-161)||(26680715-26680815)
chr5 (58-161)||(26952322-26952422)
[»] scaffold0297 (1 HSPs)
scaffold0297 (1-196)||(15515-15707)
[»] scaffold0043 (1 HSPs)
scaffold0043 (5-195)||(18325-18512)
[»] scaffold0035 (1 HSPs)
scaffold0035 (56-196)||(46573-46713)
[»] chr7 (44 HSPs)
chr7 (5-194)||(9703352-9703538)
chr7 (56-196)||(12321588-12321728)
chr7 (11-196)||(24054560-24054742)
chr7 (56-196)||(14430012-14430152)
chr7 (5-196)||(18154682-18154869)
chr7 (11-196)||(19649330-19649511)
chr7 (58-161)||(3271955-3272058)
chr7 (129-195)||(11880459-11880525)
chr7 (58-161)||(12318249-12318351)
chr7 (58-161)||(15605154-15605256)
chr7 (102-182)||(17137923-17138003)
chr7 (58-161)||(11312770-11312872)
chr7 (58-161)||(16583378-16583479)
chr7 (114-182)||(12187205-12187273)
chr7 (58-150)||(15580813-15580904)
chr7 (58-161)||(33229-33331)
chr7 (58-161)||(70647-70749)
chr7 (58-161)||(74756-74858)
chr7 (58-161)||(9446040-9446143)
chr7 (59-142)||(2760265-2760347)
chr7 (58-161)||(13635351-13635453)
chr7 (58-161)||(20569477-20569580)
chr7 (56-117)||(15083979-15084040)
chr7 (56-117)||(39722049-39722110)
chr7 (80-161)||(42205257-42205338)
chr7 (56-113)||(45170272-45170329)
chr7 (214-254)||(18454045-18454085)
chr7 (56-115)||(25927431-25927490)
chr7 (44-95)||(39267847-39267898)
chr7 (56-117)||(1859012-1859073)
chr7 (56-117)||(13918706-13918767)
chr7 (58-123)||(39722388-39722452)
chr7 (83-142)||(2530044-2530102)
chr7 (62-117)||(2530316-2530371)
chr7 (56-95)||(2832389-2832428)
chr7 (56-95)||(9751703-9751742)
chr7 (58-123)||(12714986-12715050)
chr7 (58-123)||(12718790-12718854)
chr7 (58-123)||(12723701-12723765)
chr7 (58-123)||(16114363-16114427)
chr7 (58-123)||(16117516-16117580)
chr7 (58-123)||(16907121-16907185)
chr7 (58-123)||(18279525-18279589)
chr7 (58-123)||(18283488-18283552)
[»] scaffold0149 (2 HSPs)
scaffold0149 (59-184)||(3877-4003)
scaffold0149 (59-184)||(8308-8434)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-196)||(32524-32707)
[»] scaffold0174 (1 HSPs)
scaffold0174 (36-195)||(18300-18456)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-198)||(8801-8995)
[»] scaffold0004 (2 HSPs)
scaffold0004 (35-196)||(69911-70069)
scaffold0004 (58-156)||(10471-10568)
[»] scaffold0425 (1 HSPs)
scaffold0425 (56-196)||(290-430)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-195)||(4780-4975)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-196)||(20065-20256)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-193)||(65642-65830)
scaffold0031 (58-161)||(53687-53789)
scaffold0031 (56-117)||(36348-36409)
[»] scaffold0761 (1 HSPs)
scaffold0761 (56-195)||(6156-6295)
[»] scaffold0037 (2 HSPs)
scaffold0037 (56-196)||(21415-21555)
scaffold0037 (56-117)||(80616-80677)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-196)||(36539-36731)
[»] scaffold0080 (1 HSPs)
scaffold0080 (56-182)||(18516-18642)
[»] scaffold0393 (1 HSPs)
scaffold0393 (56-189)||(1623-1756)
[»] scaffold0261 (1 HSPs)
scaffold0261 (10-196)||(1433-1613)
[»] scaffold0346 (1 HSPs)
scaffold0346 (56-161)||(15216-15321)
[»] scaffold0096 (1 HSPs)
scaffold0096 (77-196)||(16195-16315)
[»] scaffold0124 (1 HSPs)
scaffold0124 (56-175)||(42752-42871)
[»] scaffold0023 (2 HSPs)
scaffold0023 (83-196)||(38325-38439)
scaffold0023 (83-193)||(23516-23626)
[»] scaffold1895 (1 HSPs)
scaffold1895 (77-196)||(1073-1193)
[»] scaffold1296 (1 HSPs)
scaffold1296 (56-196)||(523-663)
[»] scaffold0555 (1 HSPs)
scaffold0555 (58-196)||(715-855)
[»] scaffold0021 (1 HSPs)
scaffold0021 (35-196)||(174882-175040)
[»] scaffold1326 (1 HSPs)
scaffold1326 (56-159)||(1373-1476)
[»] scaffold0676 (1 HSPs)
scaffold0676 (56-161)||(4560-4665)
[»] scaffold0615 (1 HSPs)
scaffold0615 (56-196)||(1930-2071)
[»] scaffold0104 (2 HSPs)
scaffold0104 (56-196)||(1960-2099)
scaffold0104 (56-196)||(9642-9781)
[»] scaffold0412 (1 HSPs)
scaffold0412 (56-191)||(6267-6401)
[»] scaffold0079 (1 HSPs)
scaffold0079 (56-191)||(44211-44345)
[»] scaffold0476 (2 HSPs)
scaffold0476 (59-161)||(5719-5820)
scaffold0476 (59-161)||(6914-7015)
[»] scaffold0280 (1 HSPs)
scaffold0280 (59-161)||(19173-19275)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-173)||(23928-24094)
[»] scaffold0102 (1 HSPs)
scaffold0102 (36-196)||(48306-48464)
[»] scaffold0367 (1 HSPs)
scaffold0367 (56-196)||(1027-1166)
[»] scaffold0015 (1 HSPs)
scaffold0015 (59-162)||(192197-192300)
[»] scaffold0184 (1 HSPs)
scaffold0184 (59-161)||(4106-4208)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-79)||(7771-7849)
[»] scaffold0439 (2 HSPs)
scaffold0439 (59-161)||(2317-2419)
scaffold0439 (59-161)||(10177-10279)
[»] scaffold0215 (1 HSPs)
scaffold0215 (102-196)||(27002-27096)
[»] scaffold0171 (1 HSPs)
scaffold0171 (59-160)||(35393-35494)
[»] scaffold0210 (2 HSPs)
scaffold0210 (102-178)||(21670-21746)
scaffold0210 (102-178)||(29562-29638)
[»] scaffold0017 (2 HSPs)
scaffold0017 (62-162)||(15090-15190)
scaffold0017 (62-162)||(19612-19712)
[»] scaffold0003 (3 HSPs)
scaffold0003 (58-146)||(413947-414035)
scaffold0003 (77-161)||(71454-71537)
scaffold0003 (64-117)||(71188-71241)
[»] scaffold0550 (1 HSPs)
scaffold0550 (58-161)||(7603-7706)
[»] scaffold1220 (1 HSPs)
scaffold1220 (56-161)||(1922-2026)
[»] scaffold1124 (1 HSPs)
scaffold1124 (102-182)||(2055-2135)
[»] scaffold0637 (1 HSPs)
scaffold0637 (58-161)||(8693-8796)
[»] scaffold0036 (1 HSPs)
scaffold0036 (58-161)||(66297-66399)
[»] scaffold0327 (1 HSPs)
scaffold0327 (92-161)||(445-514)
[»] scaffold0216 (1 HSPs)
scaffold0216 (56-135)||(17019-17097)
[»] scaffold0093 (1 HSPs)
scaffold0093 (83-157)||(4690-4764)
[»] scaffold0044 (2 HSPs)
scaffold0044 (58-161)||(13026-13128)
scaffold0044 (61-142)||(19313-19393)
[»] scaffold0001 (2 HSPs)
scaffold0001 (58-161)||(422413-422516)
scaffold0001 (58-150)||(173412-173503)
[»] scaffold0008 (1 HSPs)
scaffold0008 (56-150)||(30637-30730)
[»] scaffold0177 (1 HSPs)
scaffold0177 (61-161)||(13369-13468)
[»] scaffold0114 (1 HSPs)
scaffold0114 (102-182)||(7469-7549)
[»] scaffold0349 (1 HSPs)
scaffold0349 (58-161)||(12544-12646)
[»] scaffold0029 (5 HSPs)
scaffold0029 (58-161)||(80834-80936)
scaffold0029 (58-182)||(12894-13017)
scaffold0029 (56-117)||(80498-80559)
scaffold0029 (58-123)||(61532-61596)
scaffold0029 (58-123)||(65448-65512)
[»] scaffold0228 (1 HSPs)
scaffold0228 (58-124)||(18551-18616)
[»] scaffold0141 (1 HSPs)
scaffold0141 (56-117)||(14349-14410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (56-117)||(207764-207825)
[»] scaffold0012 (1 HSPs)
scaffold0012 (56-117)||(189639-189700)
[»] scaffold0405 (1 HSPs)
scaffold0405 (65-161)||(9547-9642)
[»] scaffold0525 (1 HSPs)
scaffold0525 (58-161)||(3757-3859)
[»] scaffold0483 (1 HSPs)
scaffold0483 (91-161)||(485-555)
[»] scaffold0342 (1 HSPs)
scaffold0342 (59-161)||(7152-7253)
[»] scaffold0109 (3 HSPs)
scaffold0109 (91-161)||(45272-45342)
scaffold0109 (56-117)||(36202-36263)
scaffold0109 (58-123)||(35863-35927)
[»] scaffold0299 (1 HSPs)
scaffold0299 (56-117)||(6798-6859)
[»] scaffold0157 (1 HSPs)
scaffold0157 (56-117)||(32922-32983)
[»] scaffold0051 (1 HSPs)
scaffold0051 (56-117)||(31002-31063)
[»] scaffold0120 (1 HSPs)
scaffold0120 (65-161)||(19899-19994)
[»] scaffold0293 (1 HSPs)
scaffold0293 (63-117)||(20391-20445)
[»] scaffold0229 (1 HSPs)
scaffold0229 (56-117)||(11763-11824)
[»] scaffold0410 (1 HSPs)
scaffold0410 (58-149)||(11511-11592)
[»] scaffold0401 (1 HSPs)
scaffold0401 (210-254)||(2932-2976)
[»] scaffold1052 (1 HSPs)
scaffold1052 (56-95)||(3035-3074)
[»] scaffold0324 (1 HSPs)
scaffold0324 (165-196)||(15643-15674)
[»] scaffold0166 (1 HSPs)
scaffold0166 (56-95)||(9990-10029)
[»] scaffold0372 (1 HSPs)
scaffold0372 (58-123)||(5021-5085)
[»] scaffold0268 (1 HSPs)
scaffold0268 (58-123)||(928-992)
[»] scaffold0028 (1 HSPs)
scaffold0028 (58-123)||(58639-58703)
[»] scaffold0022 (1 HSPs)
scaffold0022 (56-85)||(73725-73754)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 12570099 - 12570296
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12570099 tcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaact 12570198  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  12570199 taacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggt 12570296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 23843567 - 23843751
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| ||||||||||||||||||    || |||||||| |||||||| ||    ||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  23843567 ataacgatatcaaataaaagcaa----catctcaatcactcattcataac----tcaagtaatacaattaatcattaaaacacattataatcaacattaa 23843658  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  23843659 catttcataacagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgacacag 23843751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 44675767 - 44675905
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44675767 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 44675866  T
Q  158 tacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44675867 tacctaggggtccatctctaatcaaattatgcgacacag 44675905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 13569608 - 13569783
Alignment:
Q  16 aaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataac 114  Q
    ||||||||| |||||||| ||||||||||||||||| |    |||||||||||||||||| ||| |  |||||| ||| ||||| |||||||||||||||    
T  13569608 aaataaaagtaagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacatcatctcacatcatattcaacattaacatttcataac 13569703  T
Q  115 agcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 194  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  13569704 agcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacac 13569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 15125130 - 15125001
Alignment:
Q  66 atgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccag 164  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||    
T  15125130 atgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcagttaacat-ttaaaaaggtcactttactacccag 15125032  T
Q  165 gggtccatctctaatcaaattatgcgacaca 195  Q
    ||||||| |||||| ||||||||||||||||    
T  15125031 gggtccaactctaaacaaattatgcgacaca 15125001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 196
Target Start/End: Original strand, 15093926 - 15094046
Alignment:
Q  77 cattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 175  Q
    ||||| ||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  15093926 cattatatcacatcatattcaacattaacatttcataacagcttcagagattgcagttaacttcttatataggtcacattactaaccaagggtccatctc 15094025  T
Q  176 taatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||    
T  15094026 taatcaaattatgcgacacag 15094046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 16356938 - 16356799
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| ||  |||||| || |||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  16356938 atttcaagtaatgcatttaatcattaaatcacattacaaaaaacttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacatt 16356840  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  16356839 actacctaagggtccaaccctaatcaacttatgcgaaacag 16356799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 16488064 - 16487924
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||  || ||||||||||| ||||| ||||||    
T  16488064 atttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacagatctcaattaacatcttaaataggacacatt 16487965  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||||| | |||||| |||||||| ||||    
T  16487964 actacctaagggtccatcccaaatcaacttatgcgaaacag 16487924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 16348650 - 16348511
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||| |||||||||| |||||||||||||||||||| || ||||||| || || | || ||||||||||||| |||||||||||||| ||||||||||||    
T  16348650 attttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagtttaaaa-agcttcacagatttcagttaacatcttaaataggtcacatt 16348552  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  16348551 actacctaagggtccaaccctaatcaacttatgcgaaacag 16348511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 15353290 - 15353188
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| ||||||||||||||||| ||| |||||||||||||| ||||||  |||||||    
T  15353290 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacaaattccagttaacatcttagataggtttcattact 15353191  T
Q  159 acc 161  Q
    |||    
T  15353190 acc 15353188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 5338964 - 5338862
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||| |||||| || ||||||||||||||||||| || ||||    
T  5338964 tcaagtaatgcaattaatcaataaatcacatcataatcagcttaatggttcataacagcttctcagatttcatttaacatcttatataggtctcactact 5338865  T
Q  159 acc 161  Q
    |||    
T  5338864 acc 5338862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 36133945 - 36133844
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| ||||| |    
T  36133945 tcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttcccagttaatatcttaaataggtctcattaat 36133847  T
Q  159 acc 161  Q
    |||    
T  36133846 acc 36133844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 15121786 - 15121649
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    |||||||||||||  ||| ||||| |  |||| |||||||||| || ||| ||||| |||| |||||||||||||||||| ||||||||||||| |||||    
T  15121786 ttcaagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcagcctcacagattgcagttaacttcttatataggtctcatta 15121689  T
Q  157 ctacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||| |  ||||||| ||||| ||| |||| ||||||||    
T  15121688 ctacctaatggtccatgtctaaacaagttattcgacacag 15121649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 17810394 - 17810496
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  17810394 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttaacatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 17810492  T
Q  158 tacc 161  Q
    ||||    
T  17810493 tacc 17810496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 25555638 - 25555741
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||| |  |||||||||||||| ||| ||  ||||||    
T  25555638 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataagtttcattac 25555737  T
Q  158 tacc 161  Q
    ||||    
T  25555738 tacc 25555741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 11250545 - 11250442
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    |||| |||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||| || |  |||||||||||||| ||||||  ||||||    
T  11250545 ttcatgtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcataggtctcagttaacatcttaaataggtttcattac 11250446  T
Q  158 tacc 161  Q
    ||||    
T  11250445 tacc 11250442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 14757406 - 14757304
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  14757406 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 14757308  T
Q  158 tacc 161  Q
    ||||    
T  14757307 tacc 14757304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 16351833 - 16351730
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||| | ||||||| ||| | | |||||||||| ||||||  ||||||    
T  16351833 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaaaaacttcacaaattccggctaacatcttaaataggtttcattac 16351734  T
Q  158 tacc 161  Q
    ||||    
T  16351733 tacc 16351730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 43256141 - 43256043
Alignment:
Q  61 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactac 160  Q
    ||||||||||  |||| |||| ||||||||||||||| |||||||||||| || |||||||||| |  |||||||||||||| ||||||| ||||| |||    
T  43256141 aagtaatgcatataat-attatatcacattataatca-cttaacatttcacaatagcttcacagttcccagttaacatcttaaataggtctcattagtac 43256044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 27534148 - 27534250
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||  | |||||||||  |  |||||||||||| | ||||||| |||||     
T  27534148 ttcaagtaatgcaatcaatcaataaatcacattataa-caacttagcatttcaatatagcttcacaattaacagttaacatctcagataggtctcattag 27534246  T
Q  158 tacc 161  Q
    ||||    
T  27534247 tacc 27534250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 10712639 - 10712700
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10712639 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10712700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 10926409 - 10926470
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10926409 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 12487494 - 12487555
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12487494 atttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 12487555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 14954490 - 14954433
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  14954490 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 14954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 25689653 - 25689710
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  25689653 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 25689710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 43256400 - 43256339
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  43256400 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 43256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 9556638 - 9556716
Alignment:
Q  44 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||| ||| | ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  9556638 tcattcaatactaattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 9556716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 13813005 - 13812966
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  13813005 atttcaagtaatgcatttaatcattaattcacattataat 13812966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 20157446 - 20157407
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  20157446 atttcaagtaatgcatttaatcattaattcacattataat 20157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 4561318 - 4561254
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  4561318 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 4561254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 5756922 - 5756858
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  5756922 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 5756858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 22634406 - 22634369
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  22634406 ttcaagtaatgcatttaatcattaattcacattataat 22634369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 24755799 - 24755996
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24755799 tcatataaagatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaact 24755898  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  24755899 taacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggt 24755996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 16184813 - 16185003
Alignment:
Q  9 agatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 107  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||     
T  16184813 agatattaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagcaatgcaattaaacattaaatcacattataatcaacattaacatc 16184912  T
Q  108 tcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16184913 tcatatcagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 16185003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 377356 - 377537
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||    
T  377356 tcatgtaaagatatcaaatagaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgcaattaatcattaaatcacattatgatcagct 377455  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  377456 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaa 377537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 19259623 - 19259443
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  19259623 tcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatcattaaatcacattataatcaact 19259524  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 181  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||    
T  19259523 taacagttcataatagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatca 19259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21168763 - 21168567
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| |||||     
T  21168763 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaaca 21168664  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||  |||||||||||||||||| ||||||||||||    
T  21168663 ttaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacacag 21168567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 19983228 - 19983366
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  19983228 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 19983327  T
Q  158 tacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  19983328 tacccagggttccatctctaatcaaattatgcgacacag 19983366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 19899230 - 19899368
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    |||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  19899230 tcaagtaatgaaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 19899329  T
Q  158 tacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  19899330 tacccaagggtccatctctaatcaaattatgcgacacag 19899368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 20466025 - 20465899
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20466025 atttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacagattgcagttaacctcttatataggtcacatt 20465926  T
Q  156 actacccaggggtccatctctaatcaa 182  Q
    |||||| | |||||| || ||||||||    
T  20465925 actacctaagggtccgtccctaatcaa 20465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21162090 - 21161904
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||          |||| ||| |||||     
T  21162090 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagtaatgcaattaa----------acatcatattcaaca 21162001  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||  |||||||||||||||||| ||| ||||||||    
T  21162000 ttaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacacag 21161904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 17353975 - 17353784
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||| |    ||||||||||| ||| || ||| |  |||||| ||| |||||     
T  17353975 tcatataacgatatcaaatacaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgaaatcaaacatcatctcacatcatattcaaca 17353880  T
Q  101 taa-catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    ||| |||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  17353879 taaacatttcataacagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacaca 17353784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 30643278 - 30643137
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc-ttcacagattgcagttaacatcttatataggtcacat 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  30643278 atttcaagtaatgcaattaatcattaaatcatattataatcaacttaacagttcgtaacagctttcacagattgcagttaacatcttaaataggtcacat 30643179  T
Q  155 tactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||| | ||||||| | |||||||| || ||||| ||||    
T  30643178 tactacctaagggtccaaccctaatcaatttgtgcgaaacag 30643137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 17926692 - 17926553
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||||||||| || ||||||||||| ||||||||||||    
T  17926692 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacatt 17926594  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  17926593 actacctaagggtccaaccctaatcaatttatgcgaaacag 17926553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 23776775 - 23776681
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||    
T  23776775 aacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacctaagtgtccatctctaaccaaattatgcgacacag 23776681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 15603003 - 15602863
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcacagattgcagttaacatcttatataggtcacat 154  Q
    ||||||||||||||| |||||||||||||||||||| |  ||||||| || ||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  15603003 atttcaagtaatgcatttaatcattaaatcacattacagacaacttagcagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacat 15602905  T
Q  155 tactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||  | ||||||| | |||||||| |||||||| ||||    
T  15602904 tactacttaagggtccaaccctaatcaacttatgcgaaacag 15602863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 16410240 - 16410101
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| ||||| ||| ||||||| |||||| ||||||||||||    
T  16410240 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcagttaatatcttaaataggtcacatt 16410142  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| || ||||||||||    
T  16410141 actacctaagggtccaaccctaatcaatttgtgcgacacag 16410101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 15611455 - 15611315
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcacagattgcagttaacatcttatataggtcacat 154  Q
    ||||||||||||||| |||||||||||||||||||| |  |||||||  | ||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  15611455 atttcaagtaatgcatttaatcattaaatcacattacagacaacttagtagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacat 15611357  T
Q  155 tactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||  | ||||||| | |||||||| |||||||| ||||    
T  15611356 tactacttaagggtccaaccctaatcaacttatgcgaaacag 15611315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 21395910 - 21395828
Alignment:
Q  114 cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21395910 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21395828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 21790403 - 21790321
Alignment:
Q  114 cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21790403 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21790321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 19976647 - 19976718
Alignment:
Q  125 attgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  19976647 attgcagttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacag 19976718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 20856409 - 20856306
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||||||||||||||||| || || |||| || |||||||||| |||||||||  ||| |||||||||  ||||||||||||||    
T  20856409 ttcaagtaatgcatttaatcattaaatcacattacaaacagcttagcaattcataacaggttcacagatctcagctaacatctttaataggtcacattac 20856310  T
Q  158 tacc 161  Q
    ||||    
T  20856309 tacc 20856306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 21389380 - 21389298
Alignment:
Q  114 cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||| ||| || ||||| || ||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21389380 cagcttcacatattacaattaacttcatatattggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21389298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 22010664 - 22010579
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||| | ||||||||| ||||||||||||||    
T  22010664 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacaacctcacagatttcagttaacatctta 22010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 16861312 - 16861208
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||| | |||||||||||||||||||| || |||||||||| |||| |||||| | ||||||| ||| |||| ||||| ||| ||| || |    
T  16861312 atttcaagtaatgtatttaatcattaaatcacattacaaacaacttaacagttca-aacagccttacagatttcagctaacctcttaaatatgtctcact 16861214  T
Q  156 actacc 161  Q
    ||||||    
T  16861213 actacc 16861208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 21828337 - 21828276
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  21828337 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 21828276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 14398096 - 14398035
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  14398096 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 14398035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 18862968 - 18862911
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  18862968 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 18862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 21410733 - 21410794
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21410733 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 21805225 - 21805286
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21805225 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 39094907 - 39094861
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 105  Q
    |||||||||||| ||||||||||||| |||||| || ||||||||||    
T  39094907 tcaagtaatgcatttaatcattaaattacattacaaacaacttaaca 39094861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 19278267 - 19278203
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  19278267 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 19278203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 21972569 - 21972505
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  21972569 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 21972505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 21976654 - 21976590
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  21976654 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 21976590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 22111973 - 22112037
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  22111973 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 22112037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 43251935 - 43251999
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  43251935 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 43251999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 39094855 - 39094823
Alignment:
Q  129 cagttaacatcttatataggtcacattactacc 161  Q
    |||||||||||||| ||||||||||||||||||    
T  39094855 cagttaacatcttaaataggtcacattactacc 39094823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 15894470 - 15894274
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15894470 tcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaact 15894371  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagg 197  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  15894370 taacatttcataacagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacagg 15894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21740063 - 21739868
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||    
T  21740063 tcatataaagatatcaaatagatgcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaagtcacattataaccagct 21739964  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||| ||| | ||| |||||||    
T  21739963 taacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacag 21739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 18907241 - 18907381
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  18907241 atttcaagtaatgcaattaatcattaaatcacattataatgaacttaacagttcataacagcttcacatattgcagttaacatcttaaataggtcacatt 18907340  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||||| |||||||| | |||||||||||    
T  18907341 actacctaagggtccatccctaatcaattcatgcgacacag 18907381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 25642168 - 25642029
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcatta 25642069  T
Q  157 ctacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  25642068 ctacccaagggtccatctctaatcaaattatgcgacacag 25642029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 19863095 - 19863253
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||||||||||||||||    
T  19863095 ctcaatcattcattcat----atttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagtt 19863190  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||| |||||||    
T  19863191 aacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacag 19863253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 19873237 - 19873395
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||||||||||||||||    
T  19873237 ctcaatcattcattcat----atttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagtt 19873332  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||    
T  19873333 aacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacag 19873395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 22438892 - 22439075
Alignment:
Q  10 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 108  Q
    |||||||| |||||||||| |||| || |||||||||||| | |    ||||||||||| |||||| | ||| ||||||| |||||||||  |||||| |    
T  22438892 gatatcaagtaaaagcaagtatcatcttaatcattcattcgtaa----ttcaagtaatgtaattaaactttatatcacatcataatcaacactaacatct 22438987  T
Q  109 cataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||||||| ||||||||||| |||| |||||||||||||||    
T  22438988 cataacagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtccatctcaaatcgaattatgcgacacag 22439075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 22334896 - 22334737
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagt 132  Q
    ||||||||||||||||| |    |||||||| ||||||| |||||||||||||||||||  ||| | || | || |||||||||||| ||||||||||||    
T  22334896 ctcaatcattcattcataa----ttcaagtagtgcaatttaatcattaaatcacattatgttcaccatttatatctcataacagctttacagattgcagt 22334801  T
Q  133 taacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||    
T  22334800 taacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacag 22334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 22432342 - 22432525
Alignment:
Q  10 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 108  Q
    |||||||| |||||||||  |||| ||||||||||||||  | |    ||||||||||| |||||| || || ||||||| |||||||||  | |||| |    
T  22432342 gatatcaagtaaaagcaaatatcatctcaatcattcatttgtaa----ttcaagtaatgtaattaaacaatatatcacatcataatcaacactgacatct 22432437  T
Q  109 cataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||| ||| |||||||    
T  22432438 cataacagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacag 22432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 21834874 - 21834736
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| || || |  ||||||||||||||| |||||||||||||| |||||||| |||    
T  21834874 atttcaagtaatacatttaatcattaaatcacattataatcaacttagcagttaa--acagcttcacagatttcagttaacatcttaaataggtcagatt 21834777  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||  | ||||||||| |||||||| |||||||| ||||    
T  21834776 actactgaagggtccatccctaatcaatttatgcgaaacag 21834736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 17804319 - 17804421
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  17804319 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 17804417  T
Q  158 tacc 161  Q
    ||||    
T  17804418 tacc 17804421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 19790763 - 19790660
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||| |  |||||||||||||| ||||||  ||||||    
T  19790763 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 19790664  T
Q  158 tacc 161  Q
    ||||    
T  19790663 tacc 19790660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 20907966 - 20907863
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||||||  ||||||||||||| ||||||  ||||||    
T  20907966 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacaattcttaacaacttcccagattctagttaacatcttaaataggtttcattac 20907867  T
Q  158 tacc 161  Q
    ||||    
T  20907866 tacc 20907863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 22863068 - 22863170
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  ||||||||||| ||  |||||||||||||| ||||||| |||||     
T  22863068 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatacagcttcacaaataacagttaacatcttagataggtctcattag 22863166  T
Q  158 tacc 161  Q
    ||||    
T  22863167 tacc 22863170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 18180623 - 18180708
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||| || | |||||| | ||||||| ||||||||||||||    
T  18180623 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttaacagttga-aacagccttacagatttcagttaacatctta 18180708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 23657403 - 23657302
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||| ||||||||||||| || || |||||||| |||||||||| ||||||||  |||||||||||| | |||| ||| ||||||    
T  23657403 tcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacatatcataacagcctcacagatctcagttaacatctcacatagatcatattact 23657305  T
Q  159 acc 161  Q
    |||    
T  23657304 acc 23657302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 22430014 - 22429923
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtc 150  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| | |||||||| |  ||| |||||||||| |||||||    
T  22430014 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataataacttcacagttctcagctaacatcttaaataggtc 22429923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 14472392 - 14472494
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  14472392 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 14472490  T
Q  158 tacc 161  Q
    ||||    
T  14472491 tacc 14472494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 25767152 - 25767050
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||| || ||||||| |  ||||||| |||||| ||||||| |||||     
T  25767152 ttcaagtaatgcaatcaatcaataaattacattataatc-acttagcatttcataatagtttcacagttctcagttaatatcttaaataggtctcattag 25767054  T
Q  158 tacc 161  Q
    ||||    
T  25767053 tacc 25767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 16523331 - 16523249
Alignment:
Q  114 cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||| | || |||| | |||||||| |||||||| ||||    
T  16523331 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacag 16523249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 27567593 - 27567503
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggt 149  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| | | | |||||||| ||||||    
T  27567593 tcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagatttcggctgacatcttaaataggt 27567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 16760078 - 16760139
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  16760078 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 16760139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 31478133 - 31478072
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31478133 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 27415907 - 27415824
Alignment:
Q  77 cattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||| |  |||||||||||||| ||||||| ||||| ||||    
T  27415907 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacc 27415824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 18955747 - 18955645
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| | ||||||||||||| || |||| |||||||  | |||||||||  |  |||||||||||||||||||||| |||||     
T  18955747 ttcaagtaatgcaatcaatcaatcaatcacattataaaca-cttagcatttcaatatagcttcacaattaacagttaacatcttatataggtctcattag 18955649  T
Q  158 tacc 161  Q
    ||||    
T  18955648 tacc 18955645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 22408290 - 22408205
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||  ||||||||| || |||||||||||    
T  22408290 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagtctcacagatttcaattaacatctta 22408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 1644491 - 1644552
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1644491 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1644552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 16523371 - 16523330
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatca 97  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  16523371 atttcaggtaatgcaattaatcattaaatcacattataatca 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 22948891 - 22948948
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22948891 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22948948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 22952847 - 22952904
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22952847 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22952904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 23414763 - 23414824
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  23414763 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 23414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 23871335 - 23871392
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23871335 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 23875291 - 23875348
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23875291 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23875348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 27416193 - 27416120
Alignment:
Q  44 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||||||  ||||  ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  27416193 tcattcattaatatttagagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 27416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 27556521 - 27556582
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  27556521 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 27556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 31164744 - 31164691
Alignment:
Q  145 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    |||||| || |||||||||||||||||||||||||||||  |||||||||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggt 31164691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 15041480 - 15041396
Alignment:
Q  112 aacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||| |||||||| |  ||||||| |   |||||| ||||||||||||||||||||||||||||||||  |||||| ||||    
T  15041480 aacagctttacagattgtatctaacatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacag 15041396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 22059712 - 22059645
Alignment:
Q  73 taatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatct 140  Q
    |||||| |||||||||| ||||||| ||||| | ||||||||||||||||| ||| |  |||||||||    
T  22059712 taatcaataaatcacatcataatcagcttaatagttcataacagcttcacatatttcgtttaacatct 22059645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 14472054 - 14472100
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 102  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||    
T  14472054 atttcgagtaatgcatttaatcattaaatcacattacaaacaactta 14472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 18956086 - 18956040
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 102  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||    
T  18956086 atttcgagtaatgcatttaatcattaaatcacattacaaacaactta 18956040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 1644827 - 1644891
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  1644827 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 1644891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 11566984 - 11567048
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  11566984 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 11567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 19870712 - 19870776
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  19870712 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 19870776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 23395190 - 23395254
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  23395190 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 23395254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 23990042 - 23990106
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  23990042 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 23990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 8243983 - 8244019
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataa 94  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  8243983 ttcaagtaatgcaatcaatcaataaatcacattataa 8244019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 34951 - 34754
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34951 tcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaact 34852  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |||| ||||    
T  34851 taacaattcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggt 34754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 14118 - 13921
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  14118 tcatataaagatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaattcaattaatcattaaatcacattataatcaact 14019  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||| |||||| |||||||  || |||||||||||||||    
T  14018 taacatttcataacagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacaggt 13921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 144; Significance: 9e-76; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 2917 - 3112
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  2917 tcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagct 3016  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| | | ||||| | |||||||| |||||||||||||    
T  3017 taacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacag 3112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 6583 - 6778
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  6583 tcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagct 6682  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| | | ||||| | |||||||| |||||||||||||    
T  6683 taacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacag 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15060369 - 15060564
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  15060369 tcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatcattaaatcacattataatcaact 15060468  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| | |||||||||||    
T  15060469 taacagttcataatagcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacag 15060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 23053119 - 23052921
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattac-catttcaagtaatgcaattaatcattaaatcacattataatcaac 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||| ||||    
T  23053119 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaatcatttcaagtaatgcaattaataattaaatcacattataaacaac 23053020  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    |||| ||||||||| ||||||||| | |||| | |||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23053019 ttaaaatttcataatagcttcacaaactgcattaaacatcctaaatagatcacattactacccaggggtccatctctaatcaagttatgcgacacaggt 23052921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16909827 - 16910008
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||    
T  16909827 tcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaataaaattaatcattaaatcacattataatcaact 16909926  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  16909927 taacaattcataaaagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaa 16910008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 15051603 - 15051788
Alignment:
Q  11 atatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  15051603 atatcaaataaaatcaagcatcaactcaatcattcattcattaacatctcaggtaatgaaattaatcattaaatcacattataatcaacttaacagttca 15051702  T
Q  111 taacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| | |||||||||||    
T  15051703 taatagcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacag 15051788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 14878548 - 14878351
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | | |  | |||| ||| |||||     
T  14878548 tcatataaggatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacttcatcttacatcatattcaaca 14878449  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactaccca-ggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  14878448 ttaacatttcataatagcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacacag 14878351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16369485 - 16369666
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||    
T  16369485 tcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatgattaaatcacattataatcaact 16369584  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| | ||||  ||| ||||||||    
T  16369585 taacagttcataacagcttcacatattggagttaacatcttatatagatcacattactacctaagggtgtatccctaatcaa 16369666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 17525186 - 17524998
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| ||||||||||||||| | |||||| ||||||||||||||||| |    |||||||||||||||||| | | |  |||||| ||| ||||| ||||    
T  17525186 ataacgatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtcatctcacatcatattcaacattaa 17525091  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17525090 catttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 17524998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12172881 - 12173007
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  12172881 tcatgtaaagatatcaaataaaagcaagtaccaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagct 12172980  T
Q  101 taacatttcataacagcttcacagatt 127  Q
    |||||||||||||||||||||||||||    
T  12172981 taacatttcataacagcttcacagatt 12173007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23408513 - 23408705
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||| || |||||||| ||||||||||||||| ||||||||||||||||| |    ||||||||||| |||||| ||||| ||||||| ||| |||||     
T  23408513 tcatacaacgatatcaattaaaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgtaattaaacattatatcacatcatattcaaca 23408608  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||||| ||||||||||||||||||||||||||||| ||| | |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23408609 ctaacatctcataacagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtccatctctaatcaaattatgcgacacag 23408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 322721 - 322856
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||   ||||||||||||| ||||||||||||    
T  322721 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacacttcataacagcttcacagatcttagttaacatcttaaataggtcacatt 322820  T
Q  156 actacccaggggtccatctctaatcaaattatgcga 191  Q
    |||||| | ||||||| | |||||||| ||||||||    
T  322821 actacctaagggtccaaccctaatcaatttatgcga 322856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 18383903 - 18383763
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| |||  |||||||||||||| ||||||||||||    
T  18383903 atttcaagtaatgcaattaatcattaaatcacattaaaatcagcttaacagttcataacagcttcactgatctcagttaacatcttaaataggtcacatt 18383804  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  18383803 actacctaagggtccaaccctaatcaatttatgcgaaacag 18383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 23077509 - 23077324
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||          |||| |||| ||||     
T  23077509 tcatataaggatatcaaataaa-gcaaacatcatctcaatcattcattcattaacatttcaagtaatgcaattaa----------acatcataaccaaca 23077421  T
Q  101 taa-catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| |||||||||||||||||||| ||| |||| ||| ||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  23077420 taaacatttcataacagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacacag 23077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 12496388 - 12496527
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  12496388 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacatt 12496486  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  12496487 actacctaagggtccaaccctaatcaacttatgcgaaacag 12496527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 19725898 - 19725758
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||| ||||| |||||||| || |||||||||    
T  19725898 atttcaagtaatgtaattaatcattaaatcacattataatcagcttaacagttcatagcagtttcacagatttcagttgacatcttaaatgggtcacatt 19725799  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  19725798 actacctaagggtccaaccctaatcaatttatgcgaaacag 19725758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 11862923 - 11863063
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||| ||  |||||||||| ||||||||||||    
T  11862923 atttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacagatttcaaataacatcttaaataggtcacatt 11863022  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    | |||| | |||||||   |||||||| |||| ||| ||||    
T  11863023 aatacctaagggtccaatcctaatcaatttatacgaaacag 11863063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 11298514 - 11298383
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| ||||| ||| ||||||| |||||| ||||||||||||    
T  11298514 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacaaatttcagttaatatcttaaataggtcacatt 11298416  T
Q  156 actacccaggggtccatctctaatcaaattatg 188  Q
    |||||| | ||||||| | ||||||||||||||    
T  11298415 actacctaagggtccaaccctaatcaaattatg 11298383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 11851698 - 11851810
Alignment:
Q  43 ttcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||| ||| ||| ||||||||||    
T  11851698 ttcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacaaatttcagataacatctta 11851797  T
Q  143 tataggtcacatt 155  Q
     ||||||||||||    
T  11851798 aataggtcacatt 11851810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 1982794 - 1982692
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| ||||||| ||||||||||||||||||  |||||||||||||    
T  1982794 ttcaagtaatgcatttaatcattaaatcacattacaat-aacttaacagttcataacaacttcacatattgcagttaacatcttaattaggtcacattac 1982696  T
Q  158 tacc 161  Q
    ||||    
T  1982695 tacc 1982692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 3389919 - 3389817
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||||||| |  |||||||||||||| |||||||||||||||    
T  3389919 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacaggtctcagttaacatcttaaataggtcacattact 3389820  T
Q  159 acc 161  Q
    |||    
T  3389819 acc 3389817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 12037936 - 12037823
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||| || | |||||| || |||| |||| || ||    
T  12037936 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcaaaatggtttcacagatttcattaaacatcctaaatagatcacgttgct 12037837  T
Q  159 acccaggggtccat 172  Q
    || |||||||||||    
T  12037836 actcaggggtccat 12037823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 3402939 - 3402837
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    ||||| |||||| |||||||||||||||||||| || || ||||||| ||||||| |||||||||| |  |||||||||||||| |||||||||||||||    
T  3402939 tcaaggaatgcatttaatcattaaatcacattacaaacagcttaacaattcataatagcttcacaggtctcagttaacatcttaaataggtcacattact 3402840  T
Q  159 acc 161  Q
    |||    
T  3402839 acc 3402837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 327148 - 327025
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  327148 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 327050  T
Q  158 tacccaggggtccatctctaatcaa 182  Q
    |||| | || ||| | |||||||||    
T  327049 tacctaaggttccttttctaatcaa 327025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 11557369 - 11557266
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| ||| ||||| |||| ||||||  ||||||    
T  11557369 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagctaacaccttaaataggtttcattac 11557270  T
Q  158 tacc 161  Q
    ||||    
T  11557269 tacc 11557266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 11595123 - 11595020
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||| |  |||||||||||||| ||||||  ||||||    
T  11595123 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 11595024  T
Q  158 tacc 161  Q
    ||||    
T  11595023 tacc 11595020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 15482785 - 15482887
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  15482785 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 15482883  T
Q  158 tacc 161  Q
    ||||    
T  15482884 tacc 15482887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 20461484 - 20461382
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  20461484 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 20461386  T
Q  158 tacc 161  Q
    ||||    
T  20461385 tacc 20461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 856314 - 856394
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| |||||  |||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  856314 aacatctcatataagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 856394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 7793333 - 7793231
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| |||||  |||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  7793333 ttcaagtaatgcaatcaatcaacaaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 7793235  T
Q  158 tacc 161  Q
    ||||    
T  7793234 tacc 7793231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 14499450 - 14499552
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| ||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| ||||||    
T  14499450 ttcaagtaatgcaatcaatcaataaatcacattataaacaa-ttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 14499548  T
Q  158 tacc 161  Q
    ||||    
T  14499549 tacc 14499552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 2897803 - 2897718
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatatagg 148  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  |||||||||||||| |||||    
T  2897803 agtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttaacagttaacatcttaaatagg 2897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 14179624 - 14179690
Alignment:
Q  112 aacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaa 178  Q
    ||||||||||||||||  | ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14179624 aacagcttcacagattataattaacttcttatataggtcacaatactacccaggggtccatctctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 15877727 - 15877676
Alignment:
Q  143 tataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 194  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacac 15877676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 15878051 - 15877947
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||| |    ||||||||||| |||||||||||| ||||||| ||| |||||  |||||| |||||||| | |||||||||||||||    
T  15878051 ctcaatcattcattcataa----ttcaagtaatgaaattaatcattatatcacatcatattcaacactaacatctcataacaacatcacagattgcagtt 15877956  T
Q  134 aacatctta 142  Q
    ||| |||||    
T  15877955 aacttctta 15877947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 30066071 - 30066173
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  30066071 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 30066169  T
Q  158 tacc 161  Q
    ||||    
T  30066170 tacc 30066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 42326074 - 42326177
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || ||| |||||| ||| ||||| |||||||  |  |||||||||||||| ||||||  ||||||    
T  42326074 ttcaagtaatgcatttaatcgttaaatcacattacaaacaagttaacagttcttaacaacttcacaagtctcagttaacatcttaaataggtttcattac 42326173  T
Q  158 tacc 161  Q
    ||||    
T  42326174 tacc 42326177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 55022992 - 55023089
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||    
T  55022992 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcatta 55023089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 11070193 - 11070295
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| ||||||   | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  11070193 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcgatatagcttcacaaataacagttaacatcttagataggtctcattag 11070291  T
Q  158 tacc 161  Q
    ||||    
T  11070292 tacc 11070295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 11854858 - 11854960
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||  |  |||||||||||||| ||||||| |||||     
T  11854858 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaattaacagttaacatcttagataggtctcattag 11854956  T
Q  158 tacc 161  Q
    ||||    
T  11854957 tacc 11854960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 4589096 - 4589035
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  4589096 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 4589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 5223182 - 5223243
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  5223182 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 5223243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 12339584 - 12339645
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12339584 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 12339645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 15964755 - 15964812
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15964755 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 15968679 - 15968736
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15968679 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15968736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 15972603 - 15972660
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15972603 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15972660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 19775551 - 19775612
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  19775551 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 19775612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 37439959 - 37439898
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  37439959 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 37439898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 11165513 - 11165411
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||  |||||||  | || |||||| ||  |||||||||||||| ||||||| |||||     
T  11165513 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttggcatttcaatatagtttcacaaataacagttaacatcttagataggtctcattag 11165415  T
Q  158 tacc 161  Q
    ||||    
T  11165414 tacc 11165411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 11300495 - 11300393
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||| |||  |  |||||||||||||| ||||||| |||||     
T  11300495 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagctttacaattaacagttaacatcttagataggtctcattag 11300397  T
Q  158 tacc 161  Q
    ||||    
T  11300396 tacc 11300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 11300753 - 11300692
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||| |||| || ||||||| || |||||||||||    
T  11300753 atttcgagtaatgcatttaatcattaaatcaaattacaaacaacttagcagttcataacagc 11300692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 15464983 - 15465044
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  15464983 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 15465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 14665531 - 14665570
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  14665531 atttcaagtaatgcatttaatcattaattcacattataat 14665570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 7109823 - 7109887
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  7109823 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 7109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 7113758 - 7113822
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  7113758 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 7113822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 22321789 - 22321853
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  22321789 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 22321853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 22336844 - 22336908
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  22336844 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 22336908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 27409628 - 27409564
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  27409628 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 27409564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 28949849 - 28949913
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  28949849 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 28949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7119 - 6924
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||| |||||||||||||| | ||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||    
T  7119 tcatacaaagatatcaaatagaggcaaatatcaactcaatcattcattcattaacatctcaagtaatgcaattaatcattaaatctcattataatcagct 7020  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| | |||||||||||    
T  7019 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacag 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 6151933 - 6152128
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| || ||    
T  6151933 tcatataaatatatcaaatagaagcaagtatcaactcaatcattcattcactaacatttcaagtaatgcaattaatcattaaatcacattataaacagct 6152032  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||||||| | |||||||||||    
T  6152033 taacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacag 6152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22831418 - 22831224
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |     
T  22831418 tcatataaagatatcaaatagaagcaagtatcaactcagtcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagc- 22831320  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||| ||| | |||||||||||    
T  22831319 taacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacag 22831224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 42865241 - 42865057
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| ||||||||||||||||||    || |||||||| |||||||| ||    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  42865241 ataacgatatcaaataaaagcaa----catctcaatcactcattcataac----tcaagtaatgcaattaatcattaaatcacattataatcaacattaa 42865150  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42865149 cctttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 42865057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 21022716 - 21022899
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||||| |||||||| ||||||| |||||||||||||| |||| ||||  ||||||||||||||||||||||||||| |||||||||||||| ||    
T  21022716 tcatataaagacatcaaatagaagcaagtatcaactcaatcatccattaattaatatttcaagtaatgcaattaatcattaattcacattataatcagct 21022815  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaat 184  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||    
T  21022816 taacagttcataatagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaat 21022899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21714631 - 21714823
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| |||||||||||||| |||||| || ||||||||||||||||| |    |||||||||||||||||| ||||| ||||||| ||| |||||     
T  21714631 tcatataacgatatcaaataaaaacaagcaacatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattcaaca 21714726  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21714727 ctaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21714823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 22449252 - 22449126
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22449252 atttcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataacagcttcacagattgcagttaacatcttatatatgtcacatt 22449153  T
Q  156 actacccaggggtccatctctaatcaa 182  Q
    |||||| | ||||||||  ||||||||    
T  22449152 actacctaagggtccattcctaatcaa 22449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 18182107 - 18181967
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  18182107 atttcaagtaatgcaattaatcattgaatcacattataaacaacttagcatctcataacagcttcacagtttgcagttaacttcttatacaagtcacatt 18182008  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | | ||||||| |||||||| |||||||||||||    
T  18182007 actacctaagagtccatccctaatcaatttatgcgacacag 18181967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 18393947 - 18393845
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  18393947 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattact 18393848  T
Q  159 acc 161  Q
    |||    
T  18393847 acc 18393845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 20091477 - 20091319
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaa-ttaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagt 132  Q
    |||||||||||||||||    | |||||||  ||||| |||||||||||| ||||| ||| ||||| |||||||  | ||||||||||||||||||||||    
T  20091477 ctcaatcattcattcat----aattcaagtcgtgcaatttaatcattaaa-cacatcatattcaacattaacatcacgtaacagcttcacagattgcagt 20091383  T
Q  133 taacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||| ||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  20091382 taacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacag 20091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 21788008 - 21787886
Alignment:
Q  77 cattaaatcacattataatcaactt-aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 175  Q
    ||||| || |||| ||||||||| | ||||||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  21788008 cattatataacatcataatcaacatcaacatttcataacagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctc 21787909  T
Q  176 taatcaaattatgcgacacaggt 198  Q
    ||| ||| |||||||||||||||    
T  21787908 taaacaagttatgcgacacaggt 21787886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 45310350 - 45310248
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    ||||| |||||| |||||||||||||||||||| || || ||||||| ||||||||||||||||||||  |||||||||||||| ||||| |||||||||    
T  45310350 tcaagcaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggccacattact 45310251  T
Q  159 acc 161  Q
    |||    
T  45310250 acc 45310248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 3472911 - 3472807
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||| || |||||||||||||||||||  || ||||||| |||||||||||||||||||||||| |  ||||||||||| ||||||||||||    
T  3472911 atttcaagtaattcatttaatcattaaatcacatttcaaacaacttagcatttcataacagcttcacagattcccattaacatctta-ataggtcacatt 3472813  T
Q  156 actacc 161  Q
    ||||||    
T  3472812 actacc 3472807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 8761616 - 8761526
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggt 149  Q
    |||||||||||||||||||| |||||||||| ||||| | ||||| | ||||||||||||||||||||| || ||||||||||||||||||    
T  8761616 tcaagtaatgcaattaatcaataaatcacatcataattagcttaatagttcataacagcttcacagatttcatttaacatcttatataggt 8761526  T

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Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 24783084 - 24783001
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||  || ||||||||||||||    
T  24783084 ttcaagtaatgcaattaattaataaatcacattataatc-acttagcatttcataacagcttcacaattttcagttaacatctta 24783001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 45489727 - 45489624
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||| |  |||||||||||||| ||||||  ||||||    
T  45489727 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 45489628  T
Q  158 tacc 161  Q
    ||||    
T  45489627 tacc 45489624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 48603706 - 48603790
Alignment:
Q  112 aacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||  | ||||| |||||||||||||||| ||||||| |||||||||||||||||||| | |||| ||||||    
T  48603706 aacagcttcacagattataattaacttcttatataggtcacaatactacctaggggtccatctctaatcaattcatgcaacacag 48603790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 3705049 - 3704946
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||| | ||| ||||| ||||||||||| | | |||||||||| ||||||  ||||||    
T  3705049 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 3704950  T
Q  158 tacc 161  Q
    ||||    
T  3704949 tacc 3704946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 16080428 - 16080326
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  |||||||  ||||| ||||||| |||||     
T  16080428 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttcacagttctcagttaatctcttaaataggtctcattag 16080330  T
Q  158 tacc 161  Q
    ||||    
T  16080329 tacc 16080326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 17678573 - 17678488
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    ||||||||||||||| ||||||||||||| |||||| || |||||||||| |||| |||||| | ||||||| ||||||||||||||    
T  17678573 atttcaagtaatgcatttaatcattaaataacattacaaacaacttaacagttca-aacagccttacagatttcagttaacatctta 17678488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 1010845 - 1010947
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  1010845 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 1010943  T
Q  158 tacc 161  Q
    ||||    
T  1010944 tacc 1010947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 33797674 - 33797757
Alignment:
Q  77 cattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||| |  |||||||||||||| ||||||| ||||| ||||    
T  33797674 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacc 33797757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 36819292 - 36819190
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    |||||| |||||||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||| |  || |||| |||||| ||||||| |||||     
T  36819292 ttcaagaaatgcaatcaataaataaatcacaatataatca-cttaacatttcataaaagcttcacagttctcatttaatatcttaaataggtctcattag 36819194  T
Q  158 tacc 161  Q
    ||||    
T  36819193 tacc 36819190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 1925452 - 1925391
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1925452 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1925391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 20229132 - 20229071
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20229132 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20229071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 20924466 - 20924405
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20924466 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20924405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 22468626 - 22468543
Alignment:
Q  112 aacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    ||||||||||||||||  | ||| || |||  | ||||| || ||||||||| |||||||||||||||| ||||||||||||||    
T  22468626 aacagcttcacagattataattaccaacttcaaaaggtctcaatactacccaagggtccatctctaatcgaattatgcgacaca 22468543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 33797408 - 33797461
Alignment:
Q  64 taatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  33797408 taatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 33797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 16375442 - 16375378
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  16375442 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 16375378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 19212015 - 19212091
Alignment:
Q  84 tcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    |||| ||||||||| ||||||||||||||| |||||||||| |  |||| || ||||| |||||||| ||||| ||||    
T  19212015 tcactttataatca-cttaacatttcataaaagcttcacagttctcagtcaatatcttttataggtctcattagtacc 19212091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 20228793 - 20228729
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  20228793 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 20228729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 21407477 - 21407541
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  21407477 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 21407541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 52639663 - 52639727
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  52639663 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 52639727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 22507916 - 22507876
Alignment:
Q  214 gctatgtttgagagacctgattaccatatgaagagtcatct 254  Q
    |||||||| |||||||||||||| |||||||| ||||||||    
T  22507916 gctatgttcgagagacctgattatcatatgaatagtcatct 22507876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 14749 - 14945
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| |||||     
T  14749 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaaca 14848  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  14849 ttaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacacag 14945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23764 - 23960
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| |||||     
T  23764 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaaca 23863  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||||||||||||||||||    
T  23864 ttaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacag 23960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 39188 - 39384
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| |||||     
T  39188 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaaca 39287  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||||||||||||||||||    
T  39288 ttaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacag 39384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 24673654 - 24673849
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||    
T  24673654 tcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacagtataatcagct 24673753  T
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||  | | ||||| | |||||||| |||||||||||||    
T  24673754 taacatttcataatagcttcacagatcgcaattaacatcctatataggtcacattactacttaagagtccaaccctaatcaatttatgcgacacag 24673849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 22758719 - 22758561
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||| |||||||||||    
T  22758719 ctcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgcagtt 22758624  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||  ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  22758623 aatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacag 22758561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 22740945 - 22740806
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcatta 22740846  T
Q  157 ctacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22740845 ctacccaagggtccatctctaatcaaattatgcgacacag 22740806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 196
Target Start/End: Complemental strand, 22799092 - 22798972
Alignment:
Q  77 cattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 175  Q
    ||||| ||||||| ||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22799092 cattatatcacatcatattcaacattaacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccatctc 22798993  T
Q  176 taatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||    
T  22798992 taatcaaattatgcgacacag 22798972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23038116 - 23038308
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| |||||||||||||| |||||| || ||||||||||||||||| |    |||||||||| ||||||| ||||| ||||||| ||| | |||     
T  23038116 tcatataacgatatcaaataaaaacaagcaacatctcaatcattcattcataa----ttcaagtaattcaattaaacattatatcacatcatatttaaca 23038211  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||||| |||||| ||||||||||||||||| |||| ||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||    
T  23038212 ctaacatctcataagagcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacag 23038308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 21918288 - 21918162
Alignment:
Q  70 aattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtc 169  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| |||||||||||||| |||||||||||||||||| | |||||    
T  21918288 aattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtc 21918189  T
Q  170 catctctaatcaaattatgcgacacag 196  Q
    || |  ||||||| |||||||| ||||    
T  21918188 caaccataatcaatttatgcgaaacag 21918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 25963702 - 25963571
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||||||||| || ||||||||||| ||||||||||||    
T  25963702 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacatt 25963604  T
Q  156 actacccaggggtccatctctaatcaaattatg 188  Q
    |||||| | ||||||| | |||||||| |||||    
T  25963603 actacctaagggtccaaccctaatcaacttatg 25963571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 22811896 - 22811765
Alignment:
Q  58 ttcaagtaatgcaatt-aatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||| || ||||||||||| |||||||||||||    
T  22811896 ttcaggtaatgcaatttaatcattaaatcacattataatcaacttaatagttcatagcagcttcacagatttcacttaacatcttaaataggtcacatta 22811797  T
Q  157 ctacccaggggtccatctctaatcaaattatg 188  Q
    ||||| |  |||||| | |||||||| |||||    
T  22811796 ctacctaaaggtccaacactaatcaatttatg 22811765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 40428597 - 40428700
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  40428597 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattact 40428696  T
Q  159 accc 162  Q
    ||||    
T  40428697 accc 40428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45678161 - 45678074
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcaca 88  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45678161 tcatataaaggtatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcaca 45678074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 23103400 - 23103253
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||| |    ||||||| |||||||||| ||||| ||||||| | |  ||||  |||||| ||||||||||||||||||||||||||    
T  23103400 ctcaatcattcattcataa----ttcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcataacagcttcacagattgcagtt 23103305  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaatt 185  Q
    ||| ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  23103304 aacttcttatataggtctcattactaccaaagggtccatctctaatcaaatt 23103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 23019666 - 23019552
Alignment:
Q  83 atcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 181  Q
    ||||||| ||| ||||| |||||||||||||| ||||||||| ||||||  |||| |||||||||||||||||||||||||| ||||||| ||||||| |    
T  23019666 atcacatcatattcaacattaacatttcataaaagcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaatta 23019567  T
Q  182 aattatgcgacacag 196  Q
    |||||||||||||||    
T  23019566 aattatgcgacacag 23019552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 40622148 - 40622054
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| ||||    
T  40622148 aacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacag 40622054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 25961518 - 25961416
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||| |||||||||  |||||| ||||||| |||||||||| ||||||  ||||||    
T  25961518 ttcaagtaatgcatttaatcattaaatcacattacaa-caacttaacagttcataacaaattcacatattgcagctaacatcttaaataggtttcattac 25961420  T
Q  158 tacc 161  Q
    ||||    
T  25961419 tacc 25961416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 19688740 - 19688638
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  19688740 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 19688642  T
Q  158 tacc 161  Q
    ||||    
T  19688641 tacc 19688638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 24174932 - 24175035
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| | | |||||||||| ||||||  ||||||    
T  24174932 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 24175031  T
Q  158 tacc 161  Q
    ||||    
T  24175032 tacc 24175035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 24655323 - 24655220
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| | | |||||||||| ||||||  ||||||    
T  24655323 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 24655224  T
Q  158 tacc 161  Q
    ||||    
T  24655223 tacc 24655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 37524820 - 37524929
Alignment:
Q  78 attaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctcta 177  Q
    |||||||||||||||||||| | ||||| |||||| |||||||||||| | || ||||||||||| |||||||||||||||||| | ||||||| |  ||    
T  37524820 attaaatcacattataatcagcctaacagttcatagcagcttcacagacttcaattaacatctta-ataggtcacattactacctaagggtccaacctta 37524918  T
Q  178 atcaaattatg 188  Q
    ||||| |||||    
T  37524919 atcaacttatg 37524929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 24735525 - 24735627
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  24735525 ttcaagtaatgcgatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 24735623  T
Q  158 tacc 161  Q
    ||||    
T  24735624 tacc 24735627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 21327550 - 21327449
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||||||| |||||||||| |||| || ||||| | ||||||||||||||||||| | || ||||||| ||| ||| ||| || ||||    
T  21327550 tcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcataacagcttcacagaattcacttaacattttaaatatgtctcactact 21327451  T
Q  159 ac 160  Q
    ||    
T  21327450 ac 21327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 45678078 - 45678001
Alignment:
Q  119 tcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||||||| | |||||||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacag 45678001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 10101629 - 10101527
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  10101629 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 10101531  T
Q  158 tacc 161  Q
    ||||    
T  10101530 tacc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 24716510 - 24716412
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| |||||| || |||||||||||||| ||||||| || |||||||    
T  24716510 agtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacaggtttcagttaacatcttaaataggtctcactactacc 24716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 21318619 - 21318518
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||||||| |||||||||| |||| || ||||| | |||||| |||||||||| | | || ||||||||||| ||| ||| || ||||    
T  21318619 tcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcatagcagcttcacataattcacttaacatcttaaatatgtctcactact 21318520  T
Q  159 ac 160  Q
    ||    
T  21318519 ac 21318518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 41531321 - 41531266
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  41531321 agtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 41531266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 30345314 - 30345253
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  30345314 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 30345253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 24870016 - 24870115
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||||| | |||||| ||||||||||||| || ||||||| || ||| ||||| | ||||||||| | | |||||||||| ||||||  ||||||||||    
T  24870016 agtaatgtatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacctcacagattccggctaacatcttaaataggtttcattactacc 24870115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 1283172 - 1283233
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||| |||||||||| || ||||||| || |||||||||||    
T  1283172 atttcgagtaatgcatttaatcatttaatcacattacaaacaacttagcagttcataacagc 1283233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 31344995 - 31345056
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||| ||||||||||| || ||||||| || |||||||||||    
T  31344995 atttcgagtaatgcatttaatcatgaaatcacattacaaacaacttagcagttcataacagc 31345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 44370268 - 44370201
Alignment:
Q  73 taatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatct 140  Q
    |||||| |||||||||| ||||||| ||||| | ||||||||||||||||| ||| |  |||||||||    
T  44370268 taatcaataaatcacatcataatcagcttaatagttcataacagcttcacatatttcgtttaacatct 44370201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 12901496 - 12901432
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  12901496 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 12901432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 15477725 - 15477789
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  15477725 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 15477789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 24649479 - 24649543
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  24649479 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 24649543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 27601918 - 27601982
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  27601918 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 27601982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 41530994 - 41530930
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  41530994 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 41530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 6180 - 6376
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||| |  | |||| ||| |||||     
T  6180 tcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagaaatgcaattaaacatcatcttacatcatattcaaca 6279  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||  | ||||||||||||| |||||||||||||||||||||||||||||    
T  6280 ttaacatttcataacagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacacag 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 23501387 - 23501191
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| ||| |||||     
T  23501387 tcatataacgatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatctcacatcatattcaaca 23501288  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||    
T  23501287 ttaacaattcataacagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacag 23501191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23201445 - 23201642
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  |||| | ||| |||||     
T  23201445 tcatataacgatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatctcacgtcatattcaaca 23201544  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattacta-cccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||| |||||||||||||| |||||||||||||||||    
T  23201545 ttaacaattcataacagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacag 23201642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 14079283 - 14079421
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  14079283 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataagagcttcacagattgcagttaacttcttaaataggtcacattac 14079382  T
Q  158 tacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14079383 tacccaggggtccatctctaatcaaattatgcgacacag 14079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 23512186 - 23512380
Alignment:
Q  4 tataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccattt-caagtaatgcaattaatcattaaatcacattataatcaac-tt 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||| | || |||| ||| ||||| ||    
T  23512186 tataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacattttcaagtaatgcaattaaacatcatattacatcatattcaacatt 23512285  T
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||| |||| | ||||| |||||||||| ||| |||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  23512286 aacattttataagatcttcaaagattgcagtaaacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacag 23512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 21366652 - 21366512
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  21366652 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 21366553  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  21366552 actacctaagggtccaaccctaatcaatttatgcgaaacag 21366512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 196
Target Start/End: Original strand, 21873402 - 21873522
Alignment:
Q  77 cattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 175  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||    
T  21873402 cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggttcatctc 21873501  T
Q  176 taatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||    
T  21873502 taatcaaattatgcgacacag 21873522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 37724019 - 37724177
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||| |    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||| ||||||||||||||||||||||    
T  37724019 ctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaacagcttcacagattgcagtt 37724114  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||||||| || ||||||| | ||||||||||||||||||||||||||||||||    
T  37724115 aacttcttatataggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacag 37724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 20805669 - 20805820
Alignment:
Q  44 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttat 143  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||  |  |||||| || |||| |||||| ||||||||| ||||||||||||||     
T  20805669 tcattcaataacatttcaagtaatgcatttaatcattaaatcacattaccaataacttagcagttca-aacagcctcacagatttcagttaacatcttaa 20805767  T
Q  144 ataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||| | ||||| | | |||||||| || ||||||||||    
T  20805768 ataggtcacattactacctaagggtcaaaccctaatcaatttgtgcgacacag 20805820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 26704244 - 26704339
Alignment:
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  26704244 taacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacag 26704339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 26973977 - 26974072
Alignment:
Q  101 taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  26973977 taacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacag 26974072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 20767091 - 20767207
Alignment:
Q  44 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttat 143  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||  | |||||||  | |||| |||||| ||||||||| ||||||||||||||     
T  20767091 tcattcaataacatttcaagtaatgcatttaatcattaaatcacattaccaacaacttagtagttca-aacagcctcacagatttcagttaacatcttaa 20767189  T
Q  144 ataggtcacattactacc 161  Q
    ||||||||||||||||||    
T  20767190 ataggtcacattactacc 20767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 23458721 - 23458825
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| ||||||||| |||||||||||||| ||||||| || |    
T  23458721 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23458819  T
Q  156 actacc 161  Q
    ||||||    
T  23458820 actacc 23458825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 23462982 - 23463086
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| ||||||||| |||||||||||||| ||||||| || |    
T  23462982 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23463080  T
Q  156 actacc 161  Q
    ||||||    
T  23463081 actacc 23463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 18769944 - 18769864
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  18769944 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 18769864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 22032507 - 22032575
Alignment:
Q  114 cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||    
T  22032507 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaa 22032575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 123289 - 123187
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || || ||||||| ||||||||||| ||||||||  |||||||||||| | |||||||| |||||    
T  123289 ttcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacaattcataacagcctcacagatctcagttaacatctcacataggtcatattac 123191  T
Q  158 tacc 161  Q
    ||||    
T  123190 tacc 123187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 12028549 - 12028446
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||| |  |||||||||||||| ||||||  ||||||    
T  12028549 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 12028450  T
Q  158 tacc 161  Q
    ||||    
T  12028449 tacc 12028446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 23451477 - 23451581
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||| ||||||||| ||| || ||||||| || |||| |||||| ||||||||| |||||||||||||| ||||||| || |    
T  23451477 atttcaagtaatgcatttaatcgttaaatcactttacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23451575  T
Q  156 actacc 161  Q
    ||||||    
T  23451576 actacc 23451581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 24222009 - 24222112
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| | | |||| ||||| ||||||  ||||||    
T  24222009 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacgtcttaaataggtttcattac 24222108  T
Q  158 tacc 161  Q
    ||||    
T  24222109 tacc 24222112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 23572215 - 23572338
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    |||||||||||||  ||| ||||| |  |||| |||||||||| || ||| ||||| || ||||||| |||||||||||| ||||||||||||| |||||    
T  23572215 ttcaagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcaacttcacaaattgcagttaacttcttatataggtctcatta 23572312  T
Q  157 ctacccaggggtccatctctaatcaa 182  Q
    ||||| | ||||||||| ||||||||    
T  23572313 ctacctaagggtccatccctaatcaa 23572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 22757258 - 22757349
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggt 149  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||| || ||| ||||| |||||||| |  |||||||||||||| ||||||    
T  22757258 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacttcacaggtctcagttaacatcttaaataggt 22757349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 11220531 - 11220592
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11220531 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11220592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 11225117 - 11225178
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11225117 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11225178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 11228940 - 11229001
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11228940 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11229001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 11230929 - 11230990
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11230929 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11230990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 15236764 - 15236662
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  15236764 ttcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 15236666  T
Q  158 tacc 161  Q
    ||||    
T  15236665 tacc 15236662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 18356468 - 18356546
Alignment:
Q  77 cattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||| |  |||||||||||||| ||||||| |||||    
T  18356468 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcatta 18356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 11226950 - 11227011
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||| ||||    
T  11226950 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcatatcagc 11227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 18356075 - 18356136
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  18356075 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 18356136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 20911158 - 20911097
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20911158 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20911097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 10753147 - 10753206
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 115  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  10753147 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 10753206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 40723904 - 40723849
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  40723904 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 40723849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 17919134 - 17919069
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacaga 125  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||  |||||||    
T  17919134 tcaagtaatgcatttaatctttaaatcacattacaa-caacttaacaattcataacagtctcacaga 17919069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 17410562 - 17410602
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaa 98  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  17410562 ttcaagtaatgcaatcaatcaataaatcacattataatcaa 17410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 24767532 - 24767493
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  24767532 atttcaagtaatgcatttaatcattaattcacattataat 24767493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 31342258 - 31342301
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaactt 101  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  31342258 ttcaagtaatgcaattaatcgttaaatcacattacaaacaactt 31342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 20295969 - 20296033
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  20295969 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 20296033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 20910765 - 20910677
Alignment:
Q  77 cattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggg 166  Q
    ||||| |||||||||||||| ||||| ||||||| || ||||||||||    ||| |||||||||| ||||||| ||||| |||| ||||    
T  20910765 cattatatcacattataatc-acttagcatttcacaatagcttcacagtcctcagataacatcttaaataggtctcattagtacctaggg 20910677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 26680715 - 26680815
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| || ||| ||||||||||||| || |||||||    ||| ||||| |||||||  |  |||||||||||||| ||||||  ||||||    
T  26680715 ttcaagtaatgcatttgatcgttaaatcacattacaaacaacttag---ttcttaacaacttcacaagtctcagttaacatcttaaataggtttcattac 26680811  T
Q  158 tacc 161  Q
    ||||    
T  26680812 tacc 26680815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 26952322 - 26952422
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| || ||| ||||||||||||| || |||||||    ||| ||||| |||||||  |  |||||||||||||| ||||||  ||||||    
T  26952322 ttcaagtaatgcatttgatcgttaaatcacattacaaacaacttag---ttcttaacaacttcacaagtctcagttaacatcttaaataggtttcattac 26952418  T
Q  158 tacc 161  Q
    ||||    
T  26952419 tacc 26952422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 15707 - 15515
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||| |    ||||||||||||||||||||||||  |||||| ||| |||||     
T  15707 tcatataacgatatcaaatataagcaagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaatcattatctcacatcatattcaaca 15612  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  15611 ttaacatttcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacacag 15515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 18325 - 18512
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| ||||||||||||||| | |||||| ||||||||||||||||| |    |||||||||||||||||| | | |  |||||| ||||||||| ||||    
T  18325 ataacgatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtaatctcacatcataatcaacattaa 18420  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18421 catttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 18512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 46713 - 46573
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46713 atttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacagattgcagttaacttcttatataggtcacatt 46614  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | | ||||||| |||||||| |||||||||||||    
T  46613 actacctaagagtccatccctaatcaatttatgcgacacag 46573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 194
Target Start/End: Original strand, 9703352 - 9703538
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| ||||||||||||||| | |||||| ||||||||||||||||| |    |||||||||||||||||| | | |  |||||| ||||||||| ||||    
T  9703352 ataacgatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtaatctcacatcataatcaacattaa 9703447  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 194  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  9703448 catttcataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacac 9703538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 12321728 - 12321588
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12321728 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacagttcataacagtttcacagattgcagttaacatcttatataggtcacatt 12321629  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | | ||||||| |||||||| | |||||||||||    
T  12321628 actacctaagagtccatccctaatcaattcatgcgacacag 12321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 24054560 - 24054742
Alignment:
Q  11 atatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttc 109  Q
    ||||||| ||||||||||||||| ||||||| ||||||||| |    ||||||||||| | |||| ||| | ||||||| |||||||||  |||||| ||    
T  24054560 atatcaattaaaagcaagcatcatctcaatctttcattcataa----ttcaagtaatgtatttaaacatcatatcacatcataatcaacactaacatctc 24054655  T
Q  110 ataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  24054656 ataacagcttcacagattgcagttaactccttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacag 24054742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 14430012 - 14430152
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  14430012 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 14430111  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  14430112 actacctaagggtccaaccctaatcaatttatgcgaaacag 14430152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 18154869 - 18154682
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| |||||||||||||| |||||| || ||||||||||||||||| |    |||||||||||||||||| ||||| ||| ||| ||| ||||| ||||    
T  18154869 ataacgatatcaaataaaa-caagcaacatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcgcatcatattcaacattaa 18154775  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| |||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||  ||||||||| ||||||||| |||||||||||    
T  18154774 catctcataacagcttcacatattgcagttaacttcttatataggtctcattactacccaatggtccatctttaatcaaatcatgcgacacag 18154682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 19649511 - 19649330
Alignment:
Q  11 atatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttc 109  Q
    ||||||||||||| || ||| || ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| |||||  ||||||  |    
T  19649511 atatcaaataaaaaca-gcaacatctcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcac 19649417  T
Q  110 ataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||| ||||||||||||||||||||| ||| || |||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  19649416 ttaactgcttcacagattgcagttaacttctaatttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacag 19649330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 3271955 - 3272058
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||| | ||||||||||||||||| ||| || ||||||||||||||||||| || |||    
T  3271955 ttcaagtaatgcaattaatcagtaaatcacatcataatcagcttaatagttcataacagcttcacatatttcatttaacatcttatataggtctcactac 3272054  T
Q  158 tacc 161  Q
    ||||    
T  3272055 tacc 3272058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 11880459 - 11880525
Alignment:
Q  129 cagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  11880459 cagttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacaca 11880525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 12318249 - 12318351
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  12318249 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 12318347  T
Q  158 tacc 161  Q
    ||||    
T  12318348 tacc 12318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 15605256 - 15605154
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  15605256 ttcaagtaatgcaatcaatcaataaatcacattataatca-cttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 15605158  T
Q  158 tacc 161  Q
    ||||    
T  15605157 tacc 15605154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 17138003 - 17137923
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  17138003 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 17137923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 11312770 - 11312872
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  11312770 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 11312868  T
Q  158 tacc 161  Q
    ||||    
T  11312869 tacc 11312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 16583378 - 16583479
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||| |||||||||| |  ||||||| |||||||||||||| |||||     
T  16583378 ttcaagtaatgcaatcaatcat-aaatcacattataatca-cttagcatttcataatagcttcacagttctcagttaatatcttatataggtctcattag 16583475  T
Q  158 tacc 161  Q
    ||||    
T  16583476 tacc 16583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 12187205 - 12187273
Alignment:
Q  114 cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| |  |||||||||||||||||    
T  12187205 cagcttcacagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaa 12187273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 15580813 - 15580904
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtc 150  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||| |||||||||| |||||||||| || ||||||||||| || |||||||    
T  15580813 ttcaagtaatgcaatcaattaataaatcacattataatca-cttagcatttcataatagcttcacagttttcagttaacatcctaaataggtc 15580904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 33229 - 33331
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| ||||||    
T  33229 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 33327  T
Q  158 tacc 161  Q
    ||||    
T  33328 tacc 33331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 70749 - 70647
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| ||||||    
T  70749 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 70651  T
Q  158 tacc 161  Q
    ||||    
T  70650 tacc 70647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 74858 - 74756
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| ||||||    
T  74858 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 74760  T
Q  158 tacc 161  Q
    ||||    
T  74759 tacc 74756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 9446143 - 9446040
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| | | |||||||||| ||| ||  ||||||    
T  9446143 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaatatgtttcattac 9446044  T
Q  158 tacc 161  Q
    ||||    
T  9446043 tacc 9446040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 2760265 - 2760347
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || | |||||| ||||||||| ||||||||||||||    
T  2760265 tcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttta-aacagcctcacagatttcagttaacatctta 2760347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 13635453 - 13635351
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  | ||||| |||||| ||||| | |||||     
T  13635453 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctctgttaatatcttaaataggcctcattag 13635355  T
Q  158 tacc 161  Q
    ||||    
T  13635354 tacc 13635351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 20569580 - 20569477
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||  |  ||| |||||||||| ||||||  ||||||    
T  20569580 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacatgtatcagctaacatcttaaataggtttcattac 20569481  T
Q  158 tacc 161  Q
    ||||    
T  20569480 tacc 20569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 15083979 - 15084040
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  15083979 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 15084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 39722049 - 39722110
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  39722049 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 39722110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 42205257 - 42205338
Alignment:
Q  80 taaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    |||||||||||| ||  | ||||| | |||||||||||||||||| |  |||||||||||| | ||||||||||||||||||    
T  42205257 taaatcacattacaaatagcttaataattcataacagcttcacaggtctcagttaacatctcaaataggtcacattactacc 42205338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 45170329 - 45170272
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 113  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  45170329 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 45170272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 18454045 - 18454085
Alignment:
Q  214 gctatgtttgagagacctgattaccatatgaagagtcatct 254  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  18454045 gctatgtttgagagacctgattaccatatgaagattcatct 18454085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 25927490 - 25927431
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 115  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  25927490 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 25927431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 39267898 - 39267847
Alignment:
Q  44 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||    
T  39267898 tcattcaatactatttcaagtaatgcatttaatcattaattcacattataat 39267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 1859073 - 1859012
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  1859073 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 1859012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 13918767 - 13918706
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  13918767 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 13918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 39722388 - 39722452
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  39722388 ttcaagtaatgcaattaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 39722452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 2530102 - 2530044
Alignment:
Q  83 atcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    ||||||||||||||| |||||||||||| || |||||||||| |  ||||||||||||||    
T  2530102 atcacattataatca-cttaacatttcacaatagcttcacagttcccagttaacatctta 2530044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 2530371 - 2530316
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||||| |||||||||||||||||||| || ||||||| || ||||| |||||    
T  2530371 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcatgacagc 2530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 2832428 - 2832389
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  2832428 atttcaagtaatgcatttaatcattaattcacattataat 2832389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 9751742 - 9751703
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  9751742 atttcaagtaatgcatttaatcattaattcacattataat 9751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 12714986 - 12715050
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  12714986 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 12715050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 12718790 - 12718854
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  12718790 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 12718854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 12723701 - 12723765
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  12723701 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 12723765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 16114363 - 16114427
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  16114363 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 16114427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 16117516 - 16117580
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  16117516 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 16117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 16907185 - 16907121
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  16907185 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 16907121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 18279525 - 18279589
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  18279525 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 18279589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 18283488 - 18283552
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  18283488 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 18283552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 3877 - 4003
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  3877 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattac 3976  T
Q  158 tacccaggggtccatctctaatcaaat 184  Q
    |||||| ||||||||||||||||||||    
T  3977 tacccaagggtccatctctaatcaaat 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 8308 - 8434
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8308 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattac 8407  T
Q  158 tacccaggggtccatctctaatcaaat 184  Q
    |||||| ||||||||||||||||||||    
T  8408 tacccaagggtccatctctaatcaaat 8434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 32524 - 32707
Alignment:
Q  5 ataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaa 103  Q
    |||| ||||||||||||||||||    || ||||||||||||||||| ||    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  32524 ataacgatatcaaataaaagcaa----catctcaatcattcattcataac----tcaagtaatgcaattaatcattaaatcacattataatcaacattaa 32615  T
Q  104 catttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||| ||||||| ||| | ||||||| |||||||||||||||||| |||||| |||||||||||||||||    
T  32616 catttcataacagcttcacagattgcaattaacatttta-aaaggtcactttactacccaggggtccaactctaaacaaattatgcgacacag 32707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 36 - 195
Target Start/End: Complemental strand, 18456 - 18300
Alignment:
Q  36 tcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagtta 134  Q
    |||||||||||||||| ||    |||||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||    
T  18456 tcaatcattcattcataac----tcaagtaatgcaattattcgttaaatcacatcatattcaacattaacatttcataacagcttcacagattgtagtta 18361  T
Q  135 acatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18360 acttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 18300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 8995 - 8801
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||| |    ||||||||||| ||| || ||| |  |||||| ||| |||||     
T  8995 tcatataacgatatcaaatacaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgaaatcaaacatcatctcacatcatattcaaca 8900  T
Q  101 t-aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 198  Q
    | |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||    
T  8899 tcaacatttcataacagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggt 8801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 69911 - 70069
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| ||||||||||||||||||||||||||    
T  69911 ctcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagtt 70006  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  70007 aacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacag 70069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 10568 - 10471
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||  ||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||    
T  10568 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagtatttcataatagcttcacagttctcagttaatatcttaaataggtctcatta 10471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 290 - 430
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||  |||||||||||    
T  290 atttcaagtaatgcaattagtcattaaatcacattataatcaacttaacagttcataacagcttcacagatttccgttaacatcttaattaggtcacatt 389  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||||| |||||||| |||||||||||||    
T  390 actacctaagggtccatccctaatcaatttatgcgacacag 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 4975 - 4780
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac- 99  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||| ||| |  | |||| ||| |||||     
T  4975 tcatataaggatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtattgccaataaacatcatcttacatcatattcaaca 4876  T
Q  100 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||| | | ||||||| | ||||| |||| ||||||||||||||||||    
T  4875 ttaacatttcataacagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacaca 4780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20065 - 20256
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||  ||||||||||||| ||||||||| ||||||||||||||||| |    |||||||||||||||||| ||||| ||||||| ||| |||||     
T  20065 tcatataacaatatcaaataaaa-caagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattcaaca 20159  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  20160 ctaacatctcataacagcttcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatccctaatcaaatcatgcgacacag 20256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 65830 - 65642
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||||||| |    ||||| |||||||||||| ||||| ||||||| ||| |||||     
T  65830 tcatataaggatatcaaataaaa-caagcatcatctcaatcattcattcataa----ttcaattaatgcaattaaacattatatcacatcatattcaaca 65736  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgaca 193  Q
     |||||| |||||||||  |||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  65735 ctaacatctcataacaggatcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgaca 65642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 53687 - 53789
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  53687 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 53785  T
Q  158 tacc 161  Q
    ||||    
T  53786 tacc 53789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 36409 - 36348
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  36409 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 36348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 56 - 195
Target Start/End: Complemental strand, 6295 - 6156
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||| || |||| |||||||    
T  6295 atttcaagtaatgcaattaataattaaatcacaatataaacaacttaacatttcataatagcttcacagattgcatttaacatcctaaatagatcacatt 6196  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacaca 195  Q
    |||||  |||||||||||||||||||| ||||||||||||    
T  6195 actacttaggggtccatctctaatcaagttatgcgacaca 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 21555 - 21415
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| ||| |||||||||||||| ||||||||||||    
T  21555 atttcaagtaatacaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacaaatttcagttaacatcttaaataggtcacatt 21456  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||||| |||||||| |||||||| ||||    
T  21455 actacctaagggtccatccctaatcaatttatgcgaaacag 21415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 80677 - 80616
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| || |||||| |||||||||||||||||||| |  ||||||| || |||||||||||    
T  80677 atttcgagcaatgcatttaatcattaaatcacattacagacaacttagcagttcataacagc 80616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 36539 - 36731
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    |||||||| ||||||||||| || || ||| || |||||||||||||||||    | |||||||||||||||||| ||||| ||||||| ||| |||||     
T  36539 tcatataacgatatcaaatataaacacgcaacatctcaatcattcattcat----agttcaagtaatgcaattaaacattatatcacatcatattcaaca 36634  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||| ||||||| ||||| |||||||||||    
T  36635 ctaacatctcataacagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccttctctaaacaaatcatgcgacacag 36731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 18642 - 18516
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  18642 atttcaagtaatggaattaatcattaaatcacattataatcaacataccatttcataacagcttcacagattgcagttaacttcttatataggtctcatt 18543  T
Q  156 actacccaggggtccatctctaatcaa 182  Q
    |||||| | ||||||||| | ||||||    
T  18542 actacctaagggtccatcccaaatcaa 18516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 1623 - 1756
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  1623 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 1722  T
Q  156 actacccaggggtccatctctaatcaaattatgc 189  Q
    |||||| | ||||||| | |||||||| ||||||    
T  1723 actacctaagggtccaaccctaatcaatttatgc 1756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 1433 - 1613
Alignment:
Q  10 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 108  Q
    |||||||||||||||||| ||||   |||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| |    
T  1433 gatatcaaataaaagcaatcatc---tcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatct 1525  T
Q  109 cataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
     |||||||||||  |||||||| ||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  1526 aataacagcttcgtagattgcatttaacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacag 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 15216 - 15321
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| || |    
T  15216 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaactttttataacagcttcacagattgcagttaacatcttataaaggtctcact 15315  T
Q  156 actacc 161  Q
    ||||||    
T  15316 actacc 15321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 196
Target Start/End: Complemental strand, 16315 - 16195
Alignment:
Q  77 cattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 175  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||    
T  16315 cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcatattactacccaagggtccacctc 16216  T
Q  176 taatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||    
T  16215 taatcaaattatgcgacacag 16195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 42752 - 42871
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  42752 atttcaagtaatgcatttaatcattaaatcacattagaatcagcttaacagttcataacagcttcacagatctcagttaacatcttaaataggtcacatt 42851  T
Q  156 actacccaggggtccatctc 175  Q
    |||||| | |||||||||||    
T  42852 actacctaagggtccatctc 42871  T

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Target: scaffold0023 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 38439 - 38325
Alignment:
Q  83 atcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 181  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  38439 atcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatca 38340  T
Q  182 aattatgcgacacag 196  Q
    |||||||||||||||    
T  38339 aattatgcgacacag 38325  T

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Target: scaffold0023; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 23626 - 23516
Alignment:
Q  83 atcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 181  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||| ||||||| |  ||||||    
T  23626 atcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatca 23528  T
Q  182 aattatgcgaca 193  Q
    ||||||||||||    
T  23527 aattatgcgaca 23516  T

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Target: scaffold1895 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 77 - 196
Target Start/End: Complemental strand, 1193 - 1073
Alignment:
Q  77 cattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 175  Q
    ||||| ||||||| ||| ||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| || ||||||||    
T  1193 cattatatcacatcatattcaacattaatatttcataacagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctc 1094  T
Q  176 taatcaaattatgcgacacag 196  Q
    |||||||||||||||||||||    
T  1093 taatcaaattatgcgacacag 1073  T

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Target: scaffold1296 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 523 - 663
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||  || ||||||||||| ||||||| ||||    
T  523 atttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacagatctcaattaacatcttaaataggtcgcatt 622  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||||| | |||||| |||||||| ||||    
T  623 actacctaagggtccatcccaaatcaacttatgcgaaacag 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 715 - 855
Alignment:
Q  58 ttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||||||| ||||||| |||||||||||| ||| ||| ||||| |||||||  | |||||||||||||||||||||||||| ||||| ||||||| ||||    
T  715 ttcaagtagtgcaatttaatcattaaatcgcatcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcatt 814  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  815 actaccgaagggtccatctctaatcaaattatgcgacacag 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 174882 - 175040
Alignment:
Q  35 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||| |    |||||||||||||| ||| ||||| ||||| | ||| |||||  |||||| |||||| ||||||||||||| |||||    
T  174882 ctcaatcattcattcataa----ttcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataatagcttcacagatttcagtt 174977  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||    
T  174978 aacttcttatataggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacag 175040  T

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Target: scaffold1326 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 1476 - 1373
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||| || |||| |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  1476 atttcaagtaatgcaattattcgttaagtcacattataatcagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacatt 1377  T
Q  156 acta 159  Q
    ||||    
T  1376 acta 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 4560 - 4665
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||| || |||||||| ||||||||||||| || |    
T  4560 atttcaagtaatgcaattaatcaataaatcacattataatcaacttagcatttcataatagtttcacagtttacagttaacttcttatataggtctcact 4659  T
Q  156 actacc 161  Q
    ||||||    
T  4660 actacc 4665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 2071 - 1930
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt-cataacagcttcacagattgcagttaacatcttatataggtcacat 154  Q
    ||||||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||| ||| ||||||| |||||| |||||||||||    
T  2071 atttcaagtaatgcatttaatcattaaattacattacaaacaacttagcattttcataacagcttcacatatttcagttaatatcttaaataggtcacat 1972  T
Q  155 tactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||| | ||||||| | |||||| | | |||||||||||    
T  1971 tactacctaagggtccaaccctaatcgattcatgcgacacag 1930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 1960 - 2099
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| |||||||||| | |||||||||||| ||||||||||||    
T  1960 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacatt 2058  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| || | ||||||| |||||||||| || ||||| ||||    
T  2059 actccctaagggtccaactctaatcaatttgtgcgaaacag 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 9642 - 9781
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| |||||||||| | |||||||||||| ||||||||||||    
T  9642 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacatt 9740  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| || | ||||||| |||||||||| || ||||| ||||    
T  9741 actccctaagggtccaactctaatcaatttgtgcgaaacag 9781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 6401 - 6267
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||| ||||||||| |||||||||||||||||||| || ||| ||| || |||| |||||||||||| ||| |||||||||||||| ||||||||||||    
T  6401 atttcgagtaatgcatttaatcattaaatcacattacaaacaagttagcagttca-aacagcttcacatatttcagttaacatcttaaataggtcacatt 6303  T
Q  156 actacccaggggtccatctctaatcaaattatgcga 191  Q
    |||||| | ||||||| | |||||||| ||||||||    
T  6302 actacctaagggtccaaccctaatcaacttatgcga 6267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 44211 - 44345
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    |||| |||||||||| |||||||||||||||||||| || ||||||| || || | || ||||||||||||| |||||||||||||| ||||||||||||    
T  44211 attttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagtttaaaa-agcttcacagatttcagttaacatcttaaataggtcacatt 44309  T
Q  156 actacccaggggtccatctctaatcaaattatgcga 191  Q
    |||||| | ||||||| | |||||||| ||||||||    
T  44310 actacctaagggtccaaccctaatcaacttatgcga 44345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 5719 - 5820
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||| ||||  |||||||||||||| |||||||||||||||    
T  5719 tcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattact 5817  T
Q  159 acc 161  Q
    |||    
T  5818 acc 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 6914 - 7015
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||| ||||  |||||||||||||| |||||||||||||||    
T  6914 tcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattact 7012  T
Q  159 acc 161  Q
    |||    
T  7013 acc 7015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 19275 - 19173
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||| | ||||||||||||||||||||| || ||||||||||||||||||| || ||||    
T  19275 tcaagtaatgcaattaatcaataaatcacatcataatcagcttaatagttcataacagcttcacagatttcatttaacatcttatataggtctcactact 19176  T
Q  159 acc 161  Q
    |||    
T  19175 acc 19173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23928 - 24094
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact 100  Q
    ||||||||  |||||||||||||   |||| || |||||||||||||||||    | ||||||||||| |||||| ||||| ||||||| ||| |||||     
T  23928 tcatataacaatatcaaataaaac--agcaacatctcaatcattcattcat----agttcaagtaatgaaattaa-cattatatcacatcatattcaaca 24020  T
Q  101 -taacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatc 173  Q
     |||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  24021 ctaacatctcttaacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatc 24094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 48464 - 48306
Alignment:
Q  36 tcaatcattcattcattaccatttcaagtaatgcaa-ttaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagtt 133  Q
    ||||||||||||||||    | |||||||  ||||| ||||| |||||||||| | ||| ||||| |||||||  || |||||||||||| |||||| ||    
T  48464 tcaatcattcattcat----aattcaagtggtgcaatttaattattaaatcacgtcatattcaactttaacatcacacaacagcttcacatattgcattt 48369  T
Q  134 aacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  48368 aacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacag 48306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 1027 - 1166
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| ||  ||| |||||| ||||||||| |||||||||||||| ||||||||||||    
T  1027 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcaggtca-aacagcctcacagatttcagttaacatcttaaataggtcacatt 1125  T
Q  156 actacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    |||||  | ||||||| | |||||||| || ||||||||||    
T  1126 actacttaagggtccaaccctaatcaatttgtgcgacacag 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 192300 - 192197
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||| | ||||||||| ||||||||||  |||||||||||||| |||||||||||||||    
T  192300 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaaaaattcataacaacttcacagatctcagttaacatcttaaataggtcacattact 192201  T
Q  159 accc 162  Q
    ||||    
T  192200 accc 192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 4208 - 4106
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||| |||||| ||  |||||||||||||| |||||||||||||||    
T  4208 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagattcacatatctcagttaacatcttaaataggtcacattact 4109  T
Q  159 acc 161  Q
    |||    
T  4108 acc 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7849 - 7771
Alignment:
Q  1 tcatataaagatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcat 79  Q
    |||| ||| |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  7849 tcatgtaacgatatcaaataaaagcaagcatcatctcaatcagtcattcattaacatttcaagtaatgcaattaatcat 7771  T

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Target: scaffold0439 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 2419 - 2317
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||| | |||||||||||||||||||| || || ||||||| ||||||||||||||||||||| |||||||||||| | ||||||  |||||||    
T  2419 tcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagattccagttaacatctaagataggtttcattact 2320  T
Q  159 acc 161  Q
    |||    
T  2319 acc 2317  T

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Target: scaffold0439; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 10279 - 10177
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||| | |||||||||||||||||||| || || ||||||| ||||||||||||||||||||| |||||||||||| | ||||||  |||||||    
T  10279 tcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagattccagttaacatctaagataggtttcattact 10180  T
Q  159 acc 161  Q
    |||    
T  10179 acc 10177  T

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Target: scaffold0215 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 27002 - 27096
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 196  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||| |||| ||| ||| ||||    
T  27002 aacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaatattcgaaacag 27096  T

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Target: scaffold0171 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 35494 - 35393
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||||||||||||||||| || || ||||| | |||||||||||||||||| |  |||||||||||| | |||||||||||||||    
T  35494 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaataattcataacagcttcacaggtctcagttaacatctcaaataggtcacattact 35395  T
Q  159 ac 160  Q
    ||    
T  35394 ac 35393  T

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Target: scaffold0210 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 21746 - 21670
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaa 178  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  21746 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaa 21670  T

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Target: scaffold0210; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 29638 - 29562
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaa 178  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  29638 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaa 29562  T

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Target: scaffold0017 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 15190 - 15090
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||||||| |||||||||||||||||||| || |  |||| || ||||||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  15190 agtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttcacagatctcagttaacatcttaagtaggtcacattactacc 15091  T
Q  162 c 162  Q
    |    
T  15090 c 15090  T

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Target: scaffold0017; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 19712 - 19612
Alignment:
Q  62 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||||||| |||||||||||||||||||| || |  |||| || ||||||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  19712 agtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttcacagatctcagttaacatcttaagtaggtcacattactacc 19613  T
Q  162 c 162  Q
    |    
T  19612 c 19612  T

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Target: scaffold0003 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 414035 - 413947
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatata 146  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||| ||||||||||||||||||    
T  414035 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagttaacatcttatata 413947  T

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Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 71454 - 71537
Alignment:
Q  77 cattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||| |  |||||||||||||| ||||||| ||||| ||||    
T  71454 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacc 71537  T

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Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 71188 - 71241
Alignment:
Q  64 taatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||| |||||||| ||||||||||| || |||||||||| |||||||||||    
T  71188 taatgcatttaatcataaaatcacattacaaacaacttaacagttcataacagc 71241  T

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Target: scaffold0550 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 7603 - 7706
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| ||| || ||||||| ||||| || |||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||  ||||||    
T  7603 ttcaagtaatgcatttattcgttaaatcgcattacaaacaacttaacagttcttaacaacttcacagattccagttaacatcttatataggtttcattac 7702  T
Q  158 tacc 161  Q
    ||||    
T  7703 tacc 7706  T

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Target: scaffold1220 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 1922 - 2026
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacatt 155  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| ||||| ||| || ||||||||||||||||||| || |    
T  1922 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcatttaacatcttatataggtctcact 2020  T
Q  156 actacc 161  Q
    ||||||    
T  2021 actacc 2026  T

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Target: scaffold1124 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 2055 - 2135
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  2055 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 2135  T

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Target: scaffold0637 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 8693 - 8796
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||||||| |  |||||||||||||| ||||||  ||||||    
T  8693 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 8792  T
Q  158 tacc 161  Q
    ||||    
T  8793 tacc 8796  T

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Target: scaffold0036 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 66399 - 66297
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |  ||||||| |||||| ||||||| |||||     
T  66399 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 66301  T
Q  158 tacc 161  Q
    ||||    
T  66300 tacc 66297  T

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Target: scaffold0327 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 445 - 514
Alignment:
Q  92 taatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    |||||| ||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  445 taatcagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattactacc 514  T

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Target: scaffold0216 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 17097 - 17019
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaa 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| ||||||| ||| | |||||||    
T  17097 atttcaagtaatgcaattaatcattaaatcacattataatcaactt-acagtttataatagcttcatagaattcagttaa 17019  T

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Target: scaffold0093 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 4764 - 4690
Alignment:
Q  83 atcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  4764 atcacatcatattcaacattaacatttcata-cagcttcacagattgcagttaacttcttatataggtcacattac 4690  T

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Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 13026 - 13128
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| ||||| |  ||||||| |||||| ||||||| |||||     
T  13026 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctccacagttctcagttaatatcttaaataggtctcattag 13124  T
Q  158 tacc 161  Q
    ||||    
T  13125 tacc 13128  T

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Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 19313 - 19393
Alignment:
Q  61 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatctta 142  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| ||||| |  ||||||| ||||||    
T  19313 aagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctccacagttctcagttaatatctta 19393  T

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Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 422516 - 422413
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||| ||| || ||||||||||||| || |||||||| | ||| ||||| |||||||||||  ||||||||||||| ||||||  ||||||    
T  422516 ttcaagtaatgcatttagtcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagattctagttaacatcttaaataggtttcattac 422417  T
Q  158 tacc 161  Q
    ||||    
T  422416 tacc 422413  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 173412 - 173503
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtc 150  Q
    ||||||||||||||| ||||| || |||||| ||||||| ||||| |||||||||| ||||||| || |  ||||||| |||||  |||||||    
T  173412 ttcaagtaatgcaatcaatcaatatatcacaatataatc-acttagcatttcataatagcttcaaagttctcagttaatatctttaataggtc 173503  T

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Target: scaffold0008 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 30730 - 30637
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtc 150  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||  | |||| |||| ||| ||||||| |||||||||||||| |||||||    
T  30730 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagaagttca-aacaactttacagatttcagttaacatcttaaataggtc 30637  T

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Target: scaffold0177 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 13468 - 13369
Alignment:
Q  61 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactac 160  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| ||||| |  ||||||| |||||| ||||||| ||||| |||    
T  13468 aagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctacacagttatcagttaatatcttaaataggtctcattagtac 13370  T

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Target: scaffold0114 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 7469 - 7549
Alignment:
Q  102 aacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 182  Q
    ||||| ||||| ||| |||| |||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  7469 aacatctcatatcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 7549  T

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Target: scaffold0349 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 12544 - 12646
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||||| ||||||| |||||     
T  12544 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 12642  T
Q  158 tacc 161  Q
    ||||    
T  12643 tacc 12646  T

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Target: scaffold0029 (Bit Score: 44; Significance: 4e-16; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 80834 - 80936
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||| | ||||||||||||||| || |||| |||||||  ||||||||||| ||  |||||||||||||| ||||||| |||||     
T  80834 ttcaagtaatgcaatcaattaataaatcacattataaaca-cttagcatttcaatacagcttcacaaataacagttaacatcttagataggtctcattag 80932  T
Q  158 tacc 161  Q
    ||||    
T  80933 tacc 80936  T

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Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 12894 - 13017
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaactt-aacatttcataacagcttcacagattgcagttaacatcttatataggtcacatta 156  Q
    |||||||||||||  ||| ||||| |  |||| ||||||||||  ||||| |||||  ||||||||| |||||||||||| ||||||||||||| |||||    
T  12894 ttcaagtaatgca--taaacattataatacatcataatcaactccaacatctcatattagcttcacaaattgcagttaacttcttatataggtctcatta 12991  T
Q  157 ctacccaggggtccatctctaatcaa 182  Q
    ||||| | |||||||||  |||||||    
T  12992 ctacctaagggtccatccataatcaa 13017  T

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Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 80498 - 80559
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||  | |||||||||||    
T  80498 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagtagttcataacagc 80559  T

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Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 61596 - 61532
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  61596 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 61532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 65512 - 65448
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  65512 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 65448  T

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Target: scaffold0228 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 18616 - 18551
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacag 124  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||||||    
T  18616 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttcacag 18551  T

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Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 14410 - 14349
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  14410 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 14349  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 207825 - 207764
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  207825 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 207764  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 189700 - 189639
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  189700 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 189639  T

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Target: scaffold0405 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 9642 - 9547
Alignment:
Q  65 aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||| || ||||| ||||||||||||||||| |||||| ||||||||| |||||||||| |  ||||||| |||||| ||||||| ||||| ||||    
T  9642 aatgcgatcaatcaataaatcacattataatc-acttaaaatttcataaaagcttcacagttctcagttaatatcttaaataggtctcattagtacc 9547  T

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Target: scaffold0525 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 3859 - 3757
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 157  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | ||||||||| ||  |||||||||||| | ||||||| |||||     
T  3859 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatctcagataggtctcattag 3761  T
Q  158 tacc 161  Q
    ||||    
T  3760 tacc 3757  T

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Target: scaffold0483 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 485 - 555
Alignment:
Q  91 ataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||||| ||||| | ||||||||| ||||||||||| || ||||||||||||||||||| || |||||||    
T  485 ataatcagcttaatagttcataacaacttcacagatttcatttaacatcttatataggtctcactactacc 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 7253 - 7152
Alignment:
Q  59 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattact 158  Q
    |||||||||||| |||||| ||||||||||||| || ||  ||||| |||||||||||| ||||||||  |||||||||||| | |||| ||| | ||||    
T  7253 tcaagtaatgcatttaatctttaaatcacattacaa-cagtttaacttttcataacagcctcacagatctcagttaacatctcacatagatcataatact 7155  T
Q  159 acc 161  Q
    |||    
T  7154 acc 7152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 45272 - 45342
Alignment:
Q  91 ataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    ||||||| ||||| | ||||||||| ||||||||||| || ||||||||||||||||||| || |||||||    
T  45272 ataatcagcttaatagttcataacaacttcacagatttcatttaacatcttatataggtctcactactacc 45342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 36263 - 36202
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||    
T  36263 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcacaacagc 36202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 35927 - 35863
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  35927 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 35863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 6798 - 6859
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  6798 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 6859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 32983 - 32922
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  32983 atttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 32922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 31002 - 31063
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31002 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 19994 - 19899
Alignment:
Q  65 aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacc 161  Q
    |||||||| ||||| ||||||||||||||||| ||||||| |||||||| |||||||||| |  || |||| |||||  ||||||| ||||| ||||    
T  19994 aatgcaatcaatcaataaatcacattataatc-acttaacgtttcataaaagcttcacagttctcaattaatatctttaataggtctcattagtacc 19899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 20445 - 20391
Alignment:
Q  63 gtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    |||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20445 gtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 11824 - 11763
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 117  Q
    ||||| ||||||||| |||||||||||||| ||||| || ||||||| || |||||||||||    
T  11824 atttcgagtaatgcatttaatcattaaatcgcattaaaaacaacttagcagttcataacagc 11763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 11511 - 11592
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcacagattgcagttaacatcttatataggt 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||          ||||||||||||||||| |||||||||||||| ||||||    
T  11511 ttcaagtaatgcatttaatcgttaaatcacattacaaacaact----------taacagcttcacagattccagttaacatcttaaataggt 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 2932 - 2976
Alignment:
Q  210 tcaggctatgtttgagagacctgattaccatatgaagagtcatct 254  Q
    ||||| || |||||| |||||||||||||||||||||||||||||    
T  2932 tcaggttaagtttgatagacctgattaccatatgaagagtcatct 2976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 3035 - 3074
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  3035 atttcaagtaatgcatttaatcattaattcacattataat 3074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 196
Target Start/End: Original strand, 15643 - 15674
Alignment:
Q  165 gggtccatctctaatcaaattatgcgacacag 196  Q
    ||||||||||||||||||||||||||||||||    
T  15643 gggtccatctctaatcaaattatgcgacacag 15674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 10029 - 9990
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatcacattataat 95  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  10029 atttcaagtaatgcatttaatcattaattcacattataat 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 5085 - 5021
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  5085 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 5021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 992 - 928
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  992 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 58703 - 58639
Alignment:
Q  58 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcaca 123  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||||||    
T  58703 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcaca 58639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 85
Target Start/End: Complemental strand, 73754 - 73725
Alignment:
Q  56 atttcaagtaatgcaattaatcattaaatc 85  Q
    ||||||||||||||||||||||||||||||    
T  73754 atttcaagtaatgcaattaatcattaaatc 73725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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