View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12611_low_50 (Length: 265)

Name: NF12611_low_50
Description: NF12611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12611_low_50
NF12611_low_50
[»] chr4 (49 HSPs)
chr4 (1-259)||(7970487-7970747)
chr4 (180-259)||(2234216-2234295)
chr4 (176-225)||(3712519-3712568)
chr4 (176-239)||(35723394-35723458)
chr4 (166-248)||(15029743-15029824)
chr4 (162-216)||(35952613-35952667)
chr4 (155-239)||(36635310-36635395)
chr4 (181-245)||(21945483-21945547)
chr4 (181-248)||(14465090-14465157)
chr4 (155-225)||(56257933-56258001)
chr4 (179-225)||(8423731-8423777)
chr4 (162-216)||(15659756-15659810)
chr4 (178-240)||(21539879-21539941)
chr4 (176-234)||(40613441-40613499)
chr4 (162-215)||(18576033-18576086)
chr4 (176-225)||(22440610-22440659)
chr4 (178-239)||(37698698-37698759)
chr4 (176-216)||(903931-903971)
chr4 (155-259)||(12895105-12895208)
chr4 (176-216)||(44081587-44081627)
chr4 (176-224)||(44796972-44797020)
chr4 (177-216)||(7214533-7214572)
chr4 (51-82)||(7682071-7682102)
chr4 (176-211)||(8402752-8402787)
chr4 (162-245)||(19482648-19482731)
chr4 (178-225)||(46715486-46715533)
chr4 (176-239)||(56488520-56488583)
chr4 (162-216)||(5775354-5775408)
chr4 (179-233)||(6273936-6273990)
chr4 (167-217)||(9996848-9996898)
chr4 (167-221)||(33950140-33950194)
chr4 (162-216)||(40742600-40742654)
chr4 (166-216)||(49659523-49659573)
chr4 (176-225)||(999358-999407)
chr4 (176-245)||(13783261-13783330)
chr4 (176-225)||(18513251-18513300)
chr4 (179-216)||(19230322-19230359)
chr4 (162-223)||(30982874-30982935)
chr4 (181-245)||(847931-847995)
chr4 (168-216)||(10013913-10013961)
chr4 (168-216)||(10021054-10021102)
chr4 (184-216)||(12077837-12077869)
chr4 (180-224)||(16189710-16189754)
chr4 (184-216)||(24613719-24613751)
chr4 (160-216)||(30838219-30838275)
chr4 (162-205)||(32915601-32915645)
chr4 (177-245)||(40179647-40179715)
chr4 (176-216)||(40224541-40224581)
chr4 (176-216)||(40774290-40774330)
[»] chr1 (70 HSPs)
chr1 (160-239)||(6427336-6427415)
chr1 (161-245)||(7918206-7918290)
chr1 (121-245)||(9709800-9709918)
chr1 (179-247)||(36878439-36878507)
chr1 (166-245)||(8842714-8842793)
chr1 (155-245)||(1486698-1486788)
chr1 (162-225)||(38503320-38503383)
chr1 (156-225)||(20157340-20157409)
chr1 (162-215)||(44482240-44482293)
chr1 (177-245)||(5898277-5898345)
chr1 (181-245)||(5927355-5927419)
chr1 (163-227)||(34371712-34371775)
chr1 (185-244)||(2896140-2896199)
chr1 (162-225)||(9629896-9629959)
chr1 (176-239)||(17831541-17831604)
chr1 (164-247)||(18556454-18556537)
chr1 (166-225)||(40181871-40181930)
chr1 (167-245)||(16927186-16927264)
chr1 (166-228)||(22781439-22781501)
chr1 (167-245)||(27471567-27471645)
chr1 (181-239)||(28273103-28273161)
chr1 (181-247)||(46348398-46348464)
chr1 (163-236)||(48148034-48148108)
chr1 (199-248)||(9690305-9690354)
chr1 (176-225)||(17425103-17425152)
chr1 (176-225)||(25098565-25098614)
chr1 (162-215)||(25361896-25361949)
chr1 (176-233)||(30847730-30847787)
chr1 (166-259)||(52903215-52903308)
chr1 (176-216)||(1864890-1864930)
chr1 (160-224)||(36905998-36906062)
chr1 (162-245)||(5376496-5376579)
chr1 (162-225)||(9828044-9828107)
chr1 (163-238)||(10572586-10572661)
chr1 (166-225)||(13436458-13436517)
chr1 (166-233)||(14332642-14332709)
chr1 (178-245)||(15641042-15641109)
chr1 (176-215)||(19324572-19324611)
chr1 (167-238)||(19562622-19562693)
chr1 (156-195)||(31511970-31512009)
chr1 (181-248)||(38078676-38078743)
chr1 (177-244)||(41510895-41510962)
chr1 (165-215)||(2283676-2283726)
chr1 (162-245)||(5944261-5944346)
chr1 (167-245)||(23636050-23636128)
chr1 (179-225)||(34298436-34298482)
chr1 (177-239)||(41500717-41500779)
chr1 (162-235)||(113289-113362)
chr1 (181-238)||(1262871-1262928)
chr1 (167-248)||(6415002-6415083)
chr1 (176-225)||(12443470-12443519)
chr1 (176-241)||(13997867-13997932)
chr1 (162-224)||(19909298-19909364)
chr1 (162-239)||(24577182-24577259)
chr1 (180-245)||(25452162-25452227)
chr1 (156-225)||(33940310-33940379)
chr1 (155-216)||(34712372-34712433)
chr1 (179-216)||(40747786-40747823)
chr1 (167-216)||(41017405-41017454)
chr1 (180-216)||(2288181-2288217)
chr1 (176-216)||(10233262-10233302)
chr1 (168-216)||(12707875-12707923)
chr1 (168-216)||(12713329-12713377)
chr1 (168-216)||(12717420-12717468)
chr1 (176-216)||(16164325-16164365)
chr1 (193-233)||(23653346-23653386)
chr1 (176-216)||(23804437-23804477)
chr1 (166-238)||(29163381-29163453)
chr1 (124-160)||(32461392-32461428)
chr1 (181-245)||(41877485-41877549)
[»] chr5 (53 HSPs)
chr5 (160-239)||(3966489-3966568)
chr5 (155-247)||(39205858-39205950)
chr5 (176-246)||(27144442-27144512)
chr5 (176-234)||(32630745-32630803)
chr5 (163-227)||(6471886-6471950)
chr5 (155-243)||(38749552-38749640)
chr5 (162-245)||(6035463-6035545)
chr5 (162-225)||(32766939-32767002)
chr5 (165-239)||(11685925-11685999)
chr5 (166-239)||(26312755-26312828)
chr5 (155-248)||(31084301-31084393)
chr5 (156-248)||(2436900-2436991)
chr5 (162-238)||(18592060-18592136)
chr5 (181-245)||(21191071-21191135)
chr5 (176-216)||(23012418-23012458)
chr5 (125-216)||(10298578-10298669)
chr5 (166-245)||(16203795-16203874)
chr5 (162-245)||(22423808-22423891)
chr5 (166-224)||(30502388-30502446)
chr5 (166-224)||(30542731-30542789)
chr5 (179-216)||(30098335-30098372)
chr5 (163-224)||(36838544-36838605)
chr5 (178-242)||(12927637-12927701)
chr5 (165-225)||(28296328-28296388)
chr5 (166-234)||(28588674-28588742)
chr5 (161-225)||(41091252-41091316)
chr5 (181-245)||(41995451-41995515)
chr5 (155-247)||(43001778-43001870)
chr5 (176-239)||(12264839-12264902)
chr5 (167-214)||(15086482-15086529)
chr5 (181-216)||(15405070-15405105)
chr5 (176-239)||(19737492-19737555)
chr5 (176-223)||(34879352-34879399)
chr5 (173-215)||(10022642-10022684)
chr5 (160-222)||(17593716-17593778)
chr5 (166-216)||(17925172-17925222)
chr5 (176-214)||(24273040-24273078)
chr5 (176-214)||(24389136-24389174)
chr5 (191-245)||(26716124-26716178)
chr5 (191-245)||(26985864-26985918)
chr5 (184-245)||(9449449-9449510)
chr5 (179-216)||(25863213-25863250)
chr5 (156-213)||(41558644-41558701)
chr5 (166-207)||(42029770-42029811)
chr5 (176-245)||(42488063-42488132)
chr5 (201-245)||(5873548-5873592)
chr5 (181-245)||(6326312-6326376)
chr5 (160-244)||(19579682-19579766)
chr5 (197-245)||(19820425-19820473)
chr5 (181-225)||(27932235-27932279)
chr5 (185-245)||(32428945-32429005)
chr5 (176-216)||(33035811-33035851)
chr5 (160-216)||(35017046-35017102)
[»] chr2 (41 HSPs)
chr2 (125-245)||(21616742-21616864)
chr2 (176-245)||(37411254-37411323)
chr2 (163-227)||(44860318-44860382)
chr2 (167-242)||(18276504-18276579)
chr2 (125-245)||(20539632-20539753)
chr2 (180-245)||(21782832-21782897)
chr2 (176-245)||(23718006-23718075)
chr2 (176-245)||(24105678-24105747)
chr2 (166-222)||(34691805-34691861)
chr2 (166-222)||(34714217-34714273)
chr2 (162-225)||(24975321-24975384)
chr2 (175-225)||(28677909-28677959)
chr2 (162-216)||(30527591-30527645)
chr2 (181-247)||(37558955-37559021)
chr2 (180-245)||(16069268-16069333)
chr2 (181-245)||(12940950-12941014)
chr2 (181-245)||(20473302-20473366)
chr2 (185-225)||(27084262-27084302)
chr2 (162-210)||(35056883-35056931)
chr2 (180-243)||(4332908-4332971)
chr2 (161-216)||(18622615-18622670)
chr2 (176-239)||(31808063-31808126)
chr2 (176-238)||(896198-896260)
chr2 (166-216)||(5367201-5367251)
chr2 (162-216)||(18420430-18420484)
chr2 (182-216)||(22084848-22084882)
chr2 (176-221)||(22556964-22557010)
chr2 (183-245)||(23354669-23354731)
chr2 (180-225)||(1327978-1328023)
chr2 (192-245)||(23355021-23355074)
chr2 (162-239)||(29970545-29970622)
chr2 (160-217)||(33861935-33861992)
chr2 (176-245)||(35449493-35449562)
chr2 (168-216)||(2415326-2415374)
chr2 (161-205)||(17070936-17070980)
chr2 (176-216)||(18570981-18571021)
chr2 (176-216)||(19613623-19613663)
chr2 (168-216)||(28121551-28121599)
chr2 (176-216)||(30471047-30471087)
chr2 (176-216)||(39279684-39279724)
chr2 (176-216)||(44605149-44605189)
[»] chr3 (44 HSPs)
chr3 (127-245)||(25948848-25948966)
chr3 (166-245)||(8383237-8383316)
chr3 (162-224)||(8039831-8039893)
chr3 (155-245)||(5441022-5441110)
chr3 (179-245)||(34307793-34307859)
chr3 (177-226)||(9624640-9624689)
chr3 (177-238)||(15812832-15812893)
chr3 (178-239)||(29112292-29112353)
chr3 (160-216)||(16789021-16789077)
chr3 (166-225)||(7928450-7928509)
chr3 (162-225)||(11313796-11313859)
chr3 (162-225)||(16192746-16192809)
chr3 (163-245)||(10455770-10455852)
chr3 (166-216)||(21419455-21419505)
chr3 (170-216)||(23184076-23184122)
chr3 (176-234)||(32804550-32804608)
chr3 (167-216)||(40150572-40150621)
chr3 (176-216)||(29508453-29508493)
chr3 (178-245)||(4469830-4469897)
chr3 (178-225)||(10690274-10690321)
chr3 (162-245)||(14829670-14829752)
chr3 (163-214)||(15314873-15314924)
chr3 (176-239)||(49505164-49505227)
chr3 (162-233)||(49651782-49651853)
chr3 (179-225)||(5407260-5407306)
chr3 (179-225)||(23870572-23870618)
chr3 (159-205)||(47775745-47775791)
chr3 (166-216)||(48353731-48353781)
chr3 (166-215)||(8789550-8789599)
chr3 (176-225)||(12704007-12704056)
chr3 (166-207)||(13414487-13414528)
chr3 (179-216)||(17005632-17005669)
chr3 (182-247)||(21720742-21720807)
chr3 (182-215)||(27764716-27764749)
chr3 (207-248)||(33359738-33359779)
chr3 (166-207)||(35222956-35222997)
chr3 (168-216)||(3587335-3587383)
chr3 (199-247)||(6525713-6525761)
chr3 (162-238)||(9800027-9800103)
chr3 (180-216)||(11251987-11252023)
chr3 (177-225)||(11493372-11493420)
chr3 (182-214)||(12704056-12704088)
chr3 (181-245)||(15796309-15796373)
chr3 (176-216)||(48202279-48202319)
[»] chr7 (57 HSPs)
chr7 (176-245)||(3520352-3520421)
chr7 (162-245)||(22602706-22602789)
chr7 (162-239)||(32308106-32308183)
chr7 (163-247)||(25791631-25791714)
chr7 (162-245)||(5235966-5236049)
chr7 (162-245)||(15902802-15902885)
chr7 (166-245)||(20549771-20549850)
chr7 (176-239)||(42720900-42720963)
chr7 (156-230)||(5548671-5548745)
chr7 (163-216)||(35297669-35297722)
chr7 (162-214)||(17307904-17307956)
chr7 (176-244)||(22868023-22868091)
chr7 (161-245)||(27945021-27945105)
chr7 (145-216)||(16341505-16341576)
chr7 (162-245)||(26329378-26329461)
chr7 (167-225)||(19206050-19206108)
chr7 (167-245)||(22484005-22484083)
chr7 (175-225)||(29787378-29787428)
chr7 (163-240)||(6630909-6630986)
chr7 (181-238)||(7438693-7438750)
chr7 (162-227)||(8160414-8160479)
chr7 (155-216)||(11890908-11890969)
chr7 (157-245)||(21138987-21139072)
chr7 (174-239)||(23191882-23191947)
chr7 (176-233)||(38134416-38134473)
chr7 (167-216)||(38143232-38143281)
chr7 (179-239)||(1401011-1401071)
chr7 (157-245)||(1433434-1433522)
chr7 (156-216)||(5233638-5233698)
chr7 (155-239)||(5409825-5409909)
chr7 (156-228)||(7758319-7758391)
chr7 (180-228)||(11700800-11700848)
chr7 (157-225)||(33384573-33384641)
chr7 (181-244)||(7197312-7197375)
chr7 (190-245)||(11722122-11722177)
chr7 (162-245)||(18013070-18013153)
chr7 (182-225)||(30731037-30731080)
chr7 (162-216)||(3142074-3142128)
chr7 (162-216)||(7058435-7058489)
chr7 (162-216)||(7328687-7328741)
chr7 (176-222)||(17851434-17851480)
chr7 (163-233)||(23128658-23128728)
chr7 (183-217)||(30516374-30516408)
chr7 (166-240)||(46332919-46332993)
chr7 (167-240)||(5835232-5835305)
chr7 (166-215)||(9482944-9482993)
chr7 (176-217)||(19930951-19930992)
chr7 (167-216)||(24146825-24146874)
chr7 (162-239)||(24339628-24339705)
chr7 (180-216)||(2424623-2424659)
chr7 (176-216)||(8239060-8239100)
chr7 (161-217)||(12843170-12843226)
chr7 (165-225)||(19992001-19992061)
chr7 (176-244)||(21828415-21828483)
chr7 (177-225)||(27093424-27093472)
chr7 (177-225)||(27184829-27184877)
chr7 (168-216)||(36314629-36314677)
[»] chr6 (61 HSPs)
chr6 (166-234)||(9629374-9629442)
chr6 (177-239)||(7996389-7996451)
chr6 (177-239)||(8022350-8022412)
chr6 (156-245)||(9027158-9027247)
chr6 (166-248)||(20371110-20371192)
chr6 (122-239)||(5732471-5732583)
chr6 (166-239)||(7265593-7265666)
chr6 (156-225)||(9025484-9025553)
chr6 (176-236)||(19040341-19040401)
chr6 (176-224)||(30866154-30866202)
chr6 (166-225)||(7377979-7378038)
chr6 (165-216)||(9617443-9617494)
chr6 (178-245)||(9658859-9658926)
chr6 (162-237)||(32320665-32320740)
chr6 (162-245)||(34073343-34073426)
chr6 (162-244)||(677818-677900)
chr6 (163-245)||(3398599-3398680)
chr6 (155-245)||(7086775-7086865)
chr6 (163-245)||(10294087-10294169)
chr6 (162-239)||(7723246-7723323)
chr6 (167-214)||(13360373-13360420)
chr6 (155-245)||(20518325-20518416)
chr6 (176-234)||(13364715-13364773)
chr6 (178-216)||(26314646-26314684)
chr6 (168-213)||(97819-97864)
chr6 (178-227)||(5462684-5462733)
chr6 (155-216)||(10770663-10770724)
chr6 (176-245)||(13851716-13851785)
chr6 (162-239)||(16766683-16766760)
chr6 (167-216)||(33419182-33419231)
chr6 (125-225)||(2117076-2117175)
chr6 (164-216)||(7151421-7151473)
chr6 (179-239)||(7938102-7938162)
chr6 (155-215)||(9024165-9024225)
chr6 (162-238)||(26562676-26562752)
chr6 (166-234)||(33001289-33001357)
chr6 (176-238)||(10339135-10339198)
chr6 (162-205)||(11424707-11424750)
chr6 (160-239)||(19044450-19044529)
chr6 (166-225)||(21924935-21924994)
chr6 (162-216)||(13815451-13815505)
chr6 (162-216)||(15443704-15443758)
chr6 (160-245)||(34290073-34290156)
chr6 (183-216)||(6299521-6299554)
chr6 (183-216)||(6306331-6306364)
chr6 (179-216)||(8389485-8389522)
chr6 (163-216)||(9195751-9195804)
chr6 (176-213)||(11591880-11591917)
chr6 (167-236)||(32298608-32298677)
chr6 (179-216)||(32299284-32299321)
chr6 (180-245)||(32839660-32839725)
chr6 (167-216)||(33340946-33340995)
chr6 (167-216)||(35125103-35125152)
chr6 (176-224)||(1532241-1532289)
chr6 (181-245)||(16833288-16833352)
chr6 (181-252)||(17302529-17302601)
chr6 (157-225)||(19147842-19147910)
chr6 (176-216)||(21142127-21142167)
chr6 (176-216)||(24832597-24832637)
chr6 (181-245)||(25038086-25038150)
chr6 (180-216)||(31579239-31579275)
[»] scaffold0022 (2 HSPs)
scaffold0022 (161-239)||(99879-99957)
scaffold0022 (178-245)||(90823-90890)
[»] chr8 (39 HSPs)
chr8 (167-225)||(12606830-12606888)
chr8 (176-245)||(24362212-24362281)
chr8 (160-225)||(21465412-21465477)
chr8 (176-225)||(31236587-31236636)
chr8 (176-225)||(34897085-34897134)
chr8 (180-245)||(37283824-37283889)
chr8 (181-245)||(24669413-24669477)
chr8 (161-245)||(25172693-25172777)
chr8 (162-225)||(14634137-14634200)
chr8 (179-242)||(20679408-20679471)
chr8 (162-245)||(22651956-22652039)
chr8 (176-239)||(39954289-39954352)
chr8 (176-225)||(4611534-4611583)
chr8 (166-239)||(4786338-4786411)
chr8 (163-216)||(11803268-11803321)
chr8 (163-216)||(11927083-11927136)
chr8 (167-216)||(12559107-12559156)
chr8 (166-239)||(13844596-13844669)
chr8 (181-245)||(4673440-4673504)
chr8 (176-224)||(20785475-20785523)
chr8 (180-216)||(24017452-24017488)
chr8 (176-216)||(34201056-34201096)
chr8 (165-225)||(36934670-36934730)
chr8 (169-216)||(3508061-3508108)
chr8 (178-216)||(12985401-12985439)
chr8 (178-216)||(14134708-14134746)
chr8 (176-246)||(31109528-31109598)
chr8 (179-216)||(3025560-3025597)
chr8 (163-216)||(11944674-11944727)
chr8 (176-225)||(14731712-14731761)
chr8 (189-226)||(18069154-18069191)
chr8 (176-225)||(27213547-27213596)
chr8 (160-245)||(28384988-28385073)
chr8 (176-216)||(8798841-8798881)
chr8 (195-247)||(12124086-12124138)
chr8 (190-226)||(18067958-18067994)
chr8 (184-216)||(29447128-29447160)
chr8 (176-216)||(37225753-37225793)
chr8 (181-225)||(40332191-40332235)
[»] scaffold0168 (1 HSPs)
scaffold0168 (125-245)||(21023-21149)
[»] scaffold0123 (1 HSPs)
scaffold0123 (162-233)||(44521-44592)
[»] scaffold0110 (1 HSPs)
scaffold0110 (157-238)||(28837-28918)
[»] scaffold0044 (1 HSPs)
scaffold0044 (162-235)||(53170-53243)
[»] scaffold0020 (2 HSPs)
scaffold0020 (156-245)||(135302-135391)
scaffold0020 (160-216)||(137789-137845)
[»] scaffold0036 (1 HSPs)
scaffold0036 (163-238)||(9744-9819)
[»] scaffold0004 (1 HSPs)
scaffold0004 (181-239)||(92793-92851)
[»] scaffold0085 (1 HSPs)
scaffold0085 (176-245)||(26373-26442)
[»] scaffold0011 (1 HSPs)
scaffold0011 (167-216)||(240022-240071)
[»] scaffold1449 (1 HSPs)
scaffold1449 (162-205)||(1262-1305)
[»] scaffold0008 (1 HSPs)
scaffold0008 (162-245)||(263368-263451)
[»] scaffold0171 (1 HSPs)
scaffold0171 (155-245)||(23400-23490)
[»] scaffold0037 (1 HSPs)
scaffold0037 (182-216)||(102914-102948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (179-245)||(225281-225347)
[»] scaffold0376 (1 HSPs)
scaffold0376 (165-225)||(6312-6372)
[»] scaffold0320 (1 HSPs)
scaffold0320 (168-216)||(17038-17086)
[»] scaffold0306 (1 HSPs)
scaffold0306 (181-245)||(13380-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (181-245)||(21883-21947)
[»] scaffold0136 (1 HSPs)
scaffold0136 (181-245)||(3864-3928)


Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 7970747 - 7970487
Alignment:
Q  1 taaggtggtttgaacatgtggacagaatacctcttgattctgttgtaacaaaagtagatta----gatggagggtagtcacatcacccataggagaggaa 96  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||| ||    
T  7970747 taaggtggtttgaacatgtggacagaatacctctagattctgttgtaacaaaagtagattaattagatggagggtagtcacatcacccataggagagtaa 7970648  T
Q  97 gacttggaaagatgtagagattaatgagctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaatta 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7970647 gacttagaaagatgtagagattaatgagctatgaagcaaggacacttcttggattaggcgtgtctgacacgacaccaaaacatataattacactgaatta 7970548  T
Q  197 tatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctctgcttc 259  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7970547 tatgattttctc--attattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttc 7970487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 2234295 - 2234216
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctctgcttc 259  Q
    |||||||||||||||||| |||||||||||||||||   ||||| |||| ||||||| |||||||||| || ||||||||    
T  2234295 ataattacattgaattatgtgattttctcaaattatcaacggtgacagcgtgtcagtatctgtgtccgtatatctgcttc 2234216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 3712519 - 3712568
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3712519 acatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 35723394 - 35723458
Alignment:
Q  176 acatataattacattgaattatatg-attttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||| || ||||||||||    
T  35723394 acatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 15029824 - 15029743
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    ||||||||| ||||||||||||| |||||||| |||| || |||||||||| || ||||| || |||||||||| ||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc-gtgtccgg 15029743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 35952613 - 35952667
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||  | |||||||||||||||||||||||||||||| ||||||||||    
T  35952613 gacacgacactgatacatataattacattgaattatatgattttatcaaattatt 35952667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 36635395 - 36635310
Alignment:
Q  155 cgtgtctgacacg-acaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||  |||| || ||||||||||||| |||||||| |||||||||||||||||| | |||||  || ||||||||||    
T  36635395 cgtgtctgacactcacacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtc 36635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 21945547 - 21945483
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||| | ||||| |||||||||| || ||||| |||||||||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 14465090 - 14465157
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    ||||||||||||||||| ||||||| |||||||||| |  |||| ||  |||||||||||||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtccgg 14465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 56258001 - 56257933
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||| |||||||||||  | ||| ||||||||| ||||||||||||||||||||||||||| || |||||    
T  56258001 cgtgtttgacacgacac--agacacataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 8423731 - 8423777
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 15659756 - 15659810
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||||||||  |||||||  |||||||||||||||||    
T  15659756 gacacgacaccaacacatataattacaccgaattatgagattttctcaaattatt 15659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 21539879 - 21539941
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 240  Q
    ||||||||||| | |||||||||||||||| ||||||||   |||||| ||||||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtct 21539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 40613499 - 40613441
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    ||||||||||||| |||||||| ||||||||||||| |||| |||||||| || |||||    
T  40613499 acatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 18576033 - 18576086
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    |||| |||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  18576033 gacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 22440610 - 22440659
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| |||||||| ||||||||||||||||||  |||||||    
T  22440610 acatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 37698759 - 37698698
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||| |||||||||| |||||||||||||||| | | |||||| ||| |||||||    
T  37698759 atataattacactgaattatataattttctcaaattattagagatgtcagtatgccagtgtc 37698698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 903971 - 903931
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatt 903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 12895105 - 12895208
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctct 254  Q
    |||||| ||||||||||| | || | ||||||| ||||||||| ||||||| |||||||||| || || || || |||| ||||| ||||||| |||| |    
T  12895105 cgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtccgtatctgt 12895203  T
Q  255 gcttc 259  Q
    |||||    
T  12895204 gcttc 12895208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 44081587 - 44081627
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  44081587 acatataattacattaaattatatgattttttcaaattatt 44081627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 44796972 - 44797020
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    |||| ||||||||||||||||| | ||||||||||||||||| ||||||    
T  44796972 acatgtaattacattgaattatgttattttctcaaattattgtcggtgt 44797020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 7214533 - 7214572
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattatt 7214572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 82
Target Start/End: Complemental strand, 7682102 - 7682071
Alignment:
Q  51 aaagtagattagatggagggtagtcacatcac 82  Q
    ||||||||||||||||||||||||||||||||    
T  7682102 aaagtagattagatggagggtagtcacatcac 7682071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 8402752 - 8402787
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaa 211  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8402752 acatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 19482731 - 19482648
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| || | ||||||||  ||||||| |||| || |||||||||| |  ||||| || ||||||||||||||||    
T  19482731 gacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 46715486 - 46715533
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||| ||||||||||||| ||||| ||||||||||||| |||||||    
T  46715486 atataactacattgaattatgtgattgtctcaaattattgtcggtgtc 46715533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 56488520 - 56488583
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||| |||||  |||||||||||||||||||||||| || ||||||||| | |||| |||||    
T  56488520 acatatgattaccctgaattatatgattttctcaaattgttagcggtgtcaacgtgtcggtgtc 56488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 5775354 - 5775408
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||| |||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  5775354 gacatgacaccgacacatataattacacttaattatgtgattttctcaaattatt 5775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 6273990 - 6273936
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    |||||||||| | |||||||| ||||||||||||||||| | |||||||| ||||    
T  6273990 tataattacactaaattatatcattttctcaaattattgtctgtgtcagcgtgtc 6273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 9996898 - 9996848
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattg 217  Q
    |||||| | ||||||||||| | |||||||| |||||||||||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattattg 9996848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 33950194 - 33950140
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcgg 221  Q
    |||||| | |||||| |||||||| |||||| |||||||||||||||||| ||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 40742654 - 40742600
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||| | | ||||||||||||| |  ||||||||||||||||||||||||    
T  40742654 gacacgacatcgacacatataattacactagattatatgattttctcaaattatt 40742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 49659523 - 49659573
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||| ||| |||||| | |||||||| ||||||||||||||||    
T  49659523 cgacaccaaaacctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 999358 - 999407
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| | ||||||||||||| ||||||||||| ||| ||||    
T  999358 acatataattacactaaattatatgatttactcaaattattagcgatgtc 999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 13783330 - 13783261
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||| | |||| ||||||||| ||| |||||||| |  |||||||||| |||||    
T  13783330 acatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 18513251 - 18513300
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||| ||||||||||||||| | ||||||||||||||||  |||||||    
T  18513251 acatatgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 19230322 - 19230359
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  19230322 tataattacattgaattatgttattttctcaaattatt 19230359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 30982874 - 30982935
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtg 223  Q
    ||||||||||| | || |||||||||| |||| ||| |||||||||||||| ||| ||||||    
T  30982874 gacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 847995 - 847931
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| | |||||||| | |||||||||||||||| ||||  || || ||||||||||||||||    
T  847995 taattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtc 847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 10013961 - 10013913
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  10013961 acaccaacacatataattacattaaattatattattttgtaaaattatt 10013913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 10021102 - 10021054
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  10021102 acaccaacacatataattacattaaattatattattttgtaaaattatt 10021054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 12077869 - 12077837
Alignment:
Q  184 ttacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||| ||||||||||||||||||    
T  12077869 ttacattgaattatgtgattttctcaaattatt 12077837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 16189754 - 16189710
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||||| |||||||| ||||||||||||||| || |||||||    
T  16189754 ataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 24613719 - 24613751
Alignment:
Q  184 ttacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||| ||||||||||||||||||    
T  24613719 ttacattgaattatgtgattttctcaaattatt 24613751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 30838275 - 30838219
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| | || |||||||||| | |||||||| ||||| ||||||||||    
T  30838275 ctgacacgacaccgatacttataattacactaaattatataattttatcaaattatt 30838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 32915601 - 32915645
Alignment:
Q  162 gacacgaca-ccaaaacatataattacattgaattatatgatttt 205  Q
    ||||||||| || |||||||||||||||||||||||| |||||||    
T  32915601 gacacgacaaccgaaacatataattacattgaattatgtgatttt 32915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 40179647 - 40179715
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| |||||||| ||||||| ||||| ||||   ||||||| | |||||||||| |||||    
T  40179647 catataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 40224541 - 40224581
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| |||||||||| |||||| ||||||||||||||||    
T  40224541 acatattattacattgacttatatcattttctcaaattatt 40224581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 40774330 - 40774290
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||||||| ||||||| | ||||||||    
T  40774330 acatataattacattgaattatctgattttataaaattatt 40774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 6427415 - 6427336
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  6427415 ctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 7918206 - 7918290
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||  | ||||||||||||| |||||||| |||||||||||||||||| | | ||||||| ||||| ||||||||||    
T  7918206 tgacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtc 7918290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 9709918 - 9709800
Alignment:
Q  121 tgagctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcg 220  Q
    |||||||||||||| |||| || || |||||| |||||||     ||||||| | |||||||||||||  ||||||| |||||||||||||||||| |||    
T  9709918 tgagctatgaagcatggacactcct-ggattaagcgtgtc-----cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcg 9709825  T
Q  221 gtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||  ||||||||||||| |||||    
T  9709824 gtgtaggcatgtcagtgtccgtgtc 9709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 36878507 - 36878439
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||| ||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccg 36878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 8842714 - 8842793
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||| | | |||| | || ||||||||||||||||    
T  8842714 cgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtc 8842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 1486698 - 1486788
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| ||||||||||| | || |||||||||| |||||||| ||||||| |||||||||| || |||||||| ||||||| || |||||    
T  1486698 cgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 38503383 - 38503320
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||| |||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  38503383 gacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 20157340 - 20157409
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||| ||||||||||| | |||||| |||||| |||||||| ||||||||||| |||||| ||||||||    
T  20157340 gtgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 44482293 - 44482240
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    ||||||||||| | ||||||||||||| |||||||| |||||||||||||||||    
T  44482293 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 5898277 - 5898345
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| |||||||| ||||||| ||| |||||| |||||||| || | ||||||||||||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 5927355 - 5927419
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||| |||||||||||||| |||||||||| || |||| ||| |||||||||| |||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 34371775 - 34371712
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 227  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcag 34371712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 2896140 - 2896199
Alignment:
Q  185 tacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    |||| |||||||| |||||||||||||||||| |||||||| || |||||||||| ||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 9629896 - 9629959
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||| | || |||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  9629896 gacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtc 9629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 17831541 - 17831604
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||| |||||| ||||| || |||||||||||||||||| |||||||| || ||||||||||    
T  17831541 acatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 18556454 - 18556537
Alignment:
Q  164 cacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    ||||||||||| || | |||||||||| |||||| |||| || |||||||||| || ||||| || |||||||||| |||||||    
T  18556454 cacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 18556537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 40181930 - 40181871
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 16927186 - 16927264
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| | ||||||||||| |||||||||||||||| |||||||||| ||  || |  | ||||||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtc 16927264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 22781501 - 22781439
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagc 228  Q
    |||||||||  |||||||||| ||| |||||||||||||| | |||||||| |||||||||||    
T  22781501 cgacaccaatgcatataattatatttaattatatgattttataaaattattagcggtgtcagc 22781439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 27471567 - 27471645
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||| |||||||| |||||||| || ||||||||||||||| ||||| || |  ||||||||| ||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtc 27471645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 28273103 - 28273161
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||| |||||||||||||||| |||||| ||| |  |||||||||||||||||||    
T  28273103 taattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtc 28273161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 46348398 - 46348464
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||||| | |||||||||||||| |||||||||| || ||||| || |||||||||| |||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 46348464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 48148034 - 48148108
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatga-ttttctcaaattattggcggtgtcagcatgtcagt 236  Q
    |||||||||| | | ||||||||||| |||||||||||| |||| | |||||||| ||||||||| |||||||||    
T  48148034 acacgacaccgacatatataattacactgaattatatgatttttttaaaattattagcggtgtcaacatgtcagt 48148108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 9690305 - 9690354
Alignment:
Q  199 tgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    |||||||||||  ||||| ||||||||||| |||||||||||||||||||    
T  9690305 tgattttctcagtttattagcggtgtcagcgtgtcagtgtctgtgtccgg 9690354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 17425103 - 17425152
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||||||||||||| ||||||| ||||||||||  |||||||    
T  17425103 acatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 25098565 - 25098614
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| |||||||| |||||||||||||||||  ||||||||    
T  25098565 acatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 25361949 - 25361896
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    ||||||||||  | ||||||||||||| |||||||| |||||||||||||||||    
T  25361949 gacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 30847730 - 30847787
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    |||||| ||||||||||||||| | ||||| |||||||||| || |||||||||||||    
T  30847730 acatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 259
Target Start/End: Complemental strand, 52903308 - 52903215
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctctgcttc 259  Q
    ||||||| | ||||||||||||| |||||||||||||||| | ||||||||  |||| || || ||| |||||| ||||| | |||| ||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtctgtatctgtgcttc 52903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 1864890 - 1864930
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  1864890 acatataattacactgaattatgtgattttctcaaattatt 1864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 36906062 - 36905998
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||| || |||| ||||||||||||  |||||||| ||||||||||| |||||| |||||||    
T  36906062 ctgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 5376496 - 5376579
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | || | |||||||| |||||||| | ||||||| |||||||| |||||||| || ||| |||||| |||||    
T  5376496 gacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtc 5376579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 9828107 - 9828044
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||| | ||||| ||||||| |||||||| ||||||| |||||||||| | ||||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtc 9828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 10572586 - 10572661
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||| ||||| | |||| ||||||||  ||||||| |||||||||||||||||| | |||||| || |||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 13436517 - 13436458
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||| ||||||||||||| |||||||| |||||| || |||||||| || |||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtc 13436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 14332642 - 14332709
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||| | |||||  |||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 15641042 - 15641109
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| ||||| ||||| || ||||||||| |||||||| || ||||| ||||||||||||| |||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtc 15641109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 19324611 - 19324572
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattat 215  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  19324611 acatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 19562622 - 19562693
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||| | ||||||||||||| |||| |||  ||||||||||||||||| || ||||| || |||||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgt 19562693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 31511970 - 31512009
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaatt 195  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  31511970 gtgtctgacaggacaccaacacatataattacattgaatt 31512009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 38078676 - 38078743
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    ||||||||||||||||| ||||||| |||||||||| || |||||  | |||||||||  ||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccgg 38078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 41510895 - 41510962
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    ||||| |||||||| |||||||| ||||||| |||||| | | ||||||| |||||||||||| ||||    
T  41510895 catatgattacattcaattatatcattttcttaaattactagtggtgtcaacatgtcagtgtccgtgt 41510962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 2283726 - 2283676
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    |||||||||| || |||||||||||||||| || ||||||| |||||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 5944346 - 5944261
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatga--ttttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | || |||||||||| |||||||| |||  |||| |||||||||| || ||| | || ||||||||||||||||    
T  5944346 gacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtc 5944261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 23636050 - 23636128
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| | ||||| ||||||| |||||||| | ||||||||||||| |||||||| || || ||||| |||| |||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtc 23636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 34298482 - 34298436
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| |||||||| |||||||||||||||||| | ||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtc 34298436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 41500717 - 41500779
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||| |||||||| |||||||| ||||||| |||||| | | ||||||| ||||||||||||    
T  41500717 catatgattacattcaattatatcattttcttaaattactagtggtgtcaacatgtcagtgtc 41500779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 113362 - 113289
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcag 235  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||||    
T  113362 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 1262928 - 1262871
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||| |||||||||| |||||||||||||||||| || ||||| || |||| ||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgt 1262871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 6415002 - 6415083
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    |||||| | |||| |||||| | || ||||| |||||||||||||| ||| ||| |||| || |||||||||| ||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccgg 6415083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 12443470 - 12443519
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||| ||||||| |||||||| |||||||||||||||||| || |||||    
T  12443470 acatacaattacactgaattatgtgattttctcaaattattagctgtgtc 12443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 13997932 - 13997867
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctg 241  Q
    ||||||||||||| |||||||| ||||||| | |||| |||  ||||||| || ||||||||||||    
T  13997932 acatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtctg 13997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 19909364 - 19909298
Alignment:
Q  162 gacacgacaccaaaacatataattacat----tgaattatatgattttctcaaattattggcggtgt 224  Q
    |||||||||||||| ||||||||||| |    ||| |||| |||||||||||||||||| |||||||    
T  19909364 gacacgacaccaaagcatataattacctacactgagttatgtgattttctcaaattattagcggtgt 19909298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| |  |||||||| |||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 25452162 - 25452227
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||| ||||||||  ||||||||||||||||| || ||||  ||||||| |||||| ||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgtctttgtc 25452227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 33940379 - 33940310
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||| || ||| ||| |||||||||||||||||||| ||| ||||||  ||||||||  |||||||    
T  33940379 gtgtctgataccacatcaacacatataattacattgaattgtatcattttcataaattattatcggtgtc 33940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 34712372 - 34712433
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| ||||||||||  | ||||||||||||| | |||||| | ||||||||||||||||    
T  34712372 cgtgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattatt 34712433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 40747786 - 40747823
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  40747786 tataattacattgaattatgtcattttctcaaattatt 40747823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 41017405 - 41017454
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| | ||||||||||||| |||||| | ||||||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatt 41017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 2288181 - 2288217
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  2288181 ataattacattgaattatgtgattttcttaaattatt 2288217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 10233302 - 10233262
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||| |||||||||||| |||||    
T  10233302 acatataattacactgaattatgtgattttctcaatttatt 10233262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 12707875 - 12707923
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| |||||||||| || | |||||||||||||||| ||||||||    
T  12707875 acaccaatacatataattgcactaaattatatgattttcttaaattatt 12707923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 12713329 - 12713377
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||| | |||||| ||||||||| ||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattatt 12713377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 12717420 - 12717468
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||| | |||||| ||||||||| ||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattatt 12717468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 16164325 - 16164365
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  16164325 acatataattacattaaattatgtgattttttcaaattatt 16164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 23653386 - 23653346
Alignment:
Q  193 attatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    ||||| |||||||||||||||||| ||||||||| ||||||    
T  23653386 attatgtgattttctcaaattatttgcggtgtcatcatgtc 23653346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 23804477 - 23804437
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| |||||||| ||||| ||||||||||    
T  23804477 acatataattacattaaattatataattttatcaaattatt 23804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 29163381 - 29163453
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    ||||||| | ||||||||||| |||||||||| ||||||||  ||||| || |||||||| || |||| ||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgtgt 29163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 32461392 - 32461428
Alignment:
Q  124 gctatgaagcaaggacgcttcttggattaggcgtgtc 160  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  32461392 gctatgaagcacggacacttcttggattaggcgtgtc 32461428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 41877485 - 41877549
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| | |||||| | |||||||||||||||| |||||||| || |  |||||||||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtc 41877549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 3966568 - 3966489
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||| | ||||||||||||| |||||| | |||||||||||||||||| |||||||| |||||||||||||    
T  3966568 ctgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 39205950 - 39205858
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||||| || |||||  | |||| |||||||| ||||    
T  39205950 cgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccg 39205858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 27144512 - 27144442
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtcc 246  Q
    ||||||||||||| | |||||| |||||| ||||||||||| |||||||| || |||||||||||||||||    
T  27144512 acatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtcc 27144442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 32630745 - 32630803
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  32630745 acatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtca 32630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 6471886 - 6471950
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 227  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcag 6471950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 38749552 - 38749640
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtg 243  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||  |||||||  |||||| |||| ||||    
T  38749552 cgtgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgtttgtg 38749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 6035545 - 6035463
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | | ||||||||||| |||||||||| |||| ||||||||||| |||||||| || ||||||||||| ||||    
T  6035545 gacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgtctttgtc 6035463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 32766939 - 32767002
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| || |||||||||||||||||||| |  ||||||||||||||||| ||||||||    
T  32766939 gacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtc 32767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 11685999 - 11685925
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||| | ||||||||||||| | ||||||  || |||||||||||||| |||||||| |||||||||||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 26312828 - 26312755
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| ||||| || |||| ||||||||    
T  26312828 cgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtc 26312755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 31084393 - 31084301
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    |||||| ||||||||| | | || | ||||||||||||||||| ||||||| |||||||||| || ||||| || |||||||||| ||||||||    
T  31084393 cgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccgg 31084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 2436991 - 2436900
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    ||||| ||||||||||| | ||||||||| |||  ||||||| |||||||  ||||||||| |||||||| || |||||||||| ||||||||    
T  2436991 gtgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc-gtgtccgg 2436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 18592136 - 18592060
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||||||||   |||||||||||||||||||||| | ||||||| ||| |||| |||||||| |||| |||||||    
T  18592136 gacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgt 18592060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 21191071 - 21191135
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||| ||||||| |||||||||| || ||||| ||||||||||||| |||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtc 21191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 23012418 - 23012458
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  23012418 acatataattacattaaattatatgattttctcaaattatt 23012458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 10298669 - 10298578
Alignment:
Q  125 ctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| |||| || || |||||||||||||| || |||||||| | || | ||||||||||| ||||| ||| ||| ||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattatt 10298578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 16203795 - 16203874
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||| | ||||||||||||| | ||||||  ||||||||||||||||| || ||||| |||||| |||||| |||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 22423808 - 22423891
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | | ||||||||| |||||||||| |||||||||||||||||| |  |||||||  ||||||| || |||||    
T  22423808 gacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtc 22423891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 30098372 - 30098335
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattatt 30098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    |||||||||| | ||||||||||||| | |||||| | |||||||||||||||| |||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 12927701 - 12927637
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 242  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| |||| |  |||| ||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgt 12927637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 28296388 - 28296328
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| |||||| | ||||||||||||| | ||||||||||||||||  |||||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtc 28296328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 28588674 - 28588742
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    ||||||| | || |||||||||| |||||||| ||||||||||||||||||  ||||||| || |||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 41091252 - 41091316
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| | | ||||||||||||| |||||||| |||||||||||||| ||| || |||||    
T  41091252 tgacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 41995515 - 41995451
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||||||| ||||||| || ||||||| |  ||||| || ||||||||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtc 41995451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 43001870 - 43001778
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||| |||||  |||||| || | |||||||| |||||||| | ||||| |||||||||| || |||||  |||||||||||| |||||||    
T  43001870 cgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccg 43001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 12264839 - 12264902
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||| ||||| || | |||||||||||| ||| |||||||  |||||||||||||    
T  12264839 acatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtc 12264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 15086529 - 15086482
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaatta 214  Q
    |||||| | |||||||||||||||  ||||||||||||||||||||||    
T  15086529 gacaccgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 15405070 - 15405105
Alignment:
Q  181 taattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattatt 15405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 19737492 - 19737555
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||| ||| ||||||||||| | ||||||||||||||||  |||| ||||| ||||||||||    
T  19737492 acatatgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgtc 19737555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 34879399 - 34879352
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtg 223  Q
    |||||| |||||| |||||||||||||||||||||||| || ||||||    
T  34879399 acatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 10022684 - 10022642
Alignment:
Q  173 aaaacatataattacattgaattatatgattttctcaaattat 215  Q
    |||| ||||||||||| |||||||||||||||| |||||||||    
T  10022684 aaaatatataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 17593716 - 17593778
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 222  Q
    |||||||  |||||| | ||||||||||| |||||||  |||||||||||||||||| |||||    
T  17593716 ctgacacaccaccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 17925172 - 17925222
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| | |||||| ||||||||||||||| ||||||||| ||||||||    
T  17925172 cgacaccgacacatattattacattgaattatgtgattttcttaaattatt 17925222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 24273040 - 24273078
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaatta 214  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24273040 acatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 24389174 - 24389136
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaatta 214  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24389174 acatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 26716178 - 26716124
Alignment:
Q  191 gaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||| |||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtc 26716124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 26985918 - 26985864
Alignment:
Q  191 gaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||| |||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtc 26985864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 9449510 - 9449449
Alignment:
Q  184 ttacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||||| ||||||||||||||||||   |||||| || || ||||||| |||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtc 9449449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 25863250 - 25863213
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  25863250 tataattacactgaattatatcattttctcaaattatt 25863213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 41558644 - 41558701
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaatt 213  Q
    ||||| ||||||||||  | |||| ||||||||||||||||| | |||||||||||||    
T  41558644 gtgtccgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 42029811 - 42029770
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttct 207  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  42029811 cgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 42488063 - 42488132
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||| ||||||||||||||||||| ||||| | |||||||   |||||||  | ||||||||||||||||    
T  42488063 acatgtaattacattgaattatataattttattaaattatcaacggtgtcgacgtgtcagtgtctgtgtc 42488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 5873548 - 5873592
Alignment:
Q  201 attttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtgtc 5873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 6326312 - 6326376
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||| | |||||||||||||| | ||| |||| || |||||||||| |||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtc 6326376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 19579766 - 19579682
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    ||||||||||||| | || | ||||| || | |||||| |||||||||||||||||| || ||||| || | |||||||| ||||    
T  19579766 ctgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 19820425 - 19820473
Alignment:
Q  197 tatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||||||||||| |||||||| |  |||||||||| |||||    
T  19820425 tatgattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtc 19820473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 27932279 - 27932235
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||| |||||||| | |||||||||||||||| ||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtc 27932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 32428945 - 32429005
Alignment:
Q  185 tacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| | | ||||||||||||||  | |||||| |||||||||||| |||||    
T  32428945 tacattgaattatgtcactttctcaaattattatcagtgtcaccatgtcagtgtccgtgtc 32429005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 33035811 - 33035851
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||||||||||  ||||||||||    
T  33035811 acatataattacactgaattatatgatttattcaaattatt 33035851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 35017102 - 35017046
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||| |   |||||||||||| | |||||| ||||||||||||||||||    
T  35017102 ctgacacgacactatcccatataattacactaaattatgtgattttctcaaattatt 35017046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 21616864 - 21616742
Alignment:
Q  125 ctatgaagcaaggacgcttcttggattaggcgtgtctgacac--gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 222  Q
    |||||||||| |||| ||||||||||||| |||||| | |||  |||||  | ||||||||||||| |||||||| |||||||||||||||||| |||||    
T  21616864 ctatgaagcacggacacttcttggattagccgtgtccggcaccggacacgtacacatataattacactgaattatgtgattttctcaaattattagcggt 21616765  T
Q  223 gtcagcatgtcagtgtctgtgtc 245  Q
    ||| || |||| ||||| |||||    
T  21616764 gtcggcgtgtccgtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 37411254 - 37411323
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||| ||| |||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  37411254 acatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 44860382 - 44860318
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 227  Q
    |||||||||| | ||||||||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcag 44860318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 18276579 - 18276504
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 242  Q
    |||||| | ||| ||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgt 18276504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 245
Target Start/End: Original strand, 20539632 - 20539753
Alignment:
Q  125 ctatgaagcaaggacgcttcttggattaggcgtgtct-gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtg 223  Q
    |||||||||| |||| || || |||| |||||||||| | ||||||||| | || | |||||||| | |||||||||||||| |||||||||| || |||    
T  20539632 ctatgaagcacggacactcctcggatcaggcgtgtctcgccacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtg 20539731  T
Q  224 tcagcatgtcagtgtctgtgtc 245  Q
    ||  | |||||||||| |||||    
T  20539732 tcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 21782832 - 21782897
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||| |||||||| |||||||||||||||||| || ||||| || ||||||||| ||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtc 21782897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 23718075 - 23718006
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||| |  |||||||||| |||||    
T  23718075 acatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 24105747 - 24105678
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||| |  |||||||||| |||||    
T  24105747 acatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 34691805 - 34691861
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 222  Q
    ||||||| | ||||||||||||| |||||||||||||||| |||||||||| |||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 34714217 - 34714273
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 222  Q
    ||||||| | ||||||||||||| |||||||||||||||| |||||||||| |||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 24975321 - 24975384
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||| |  |||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 28677959 - 28677909
Alignment:
Q  175 aacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  28677959 aacatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 30527591 - 30527645
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||| | ||||||||||||| | |||||||||||||||||||||||||    
T  30527591 gacacgataccgacacatataattacactaaattatatgattttctcaaattatt 30527645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 37559021 - 37558955
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    ||||||||||||||||| |||||||  ||||||||| || ||||| || |||||||||| |||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 37558955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 16069268 - 16069333
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||| |||||||||||||||| | ||||||||  ||||||| || |||||||||| |||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 12940950 - 12941014
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||||||||||| |||||||||| |  |||||| | |||||||||| |||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtc 12941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 20473366 - 20473302
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||||||| ||| | |||||||| |  ||||| |||||||||||||||||||    
T  20473366 taattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtc 20473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 27084302 - 27084262
Alignment:
Q  185 tacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  27084302 tacattgaattatatgattttctcaaattattagcagtgtc 27084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 35056931 - 35056883
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaa 210  Q
    ||||||||||| | ||||||||||||| ||||||||||| |||||||||    
T  35056931 gacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 4332971 - 4332908
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtg 243  Q
    |||||||||||||||||| |||||||| |||||||||  | ||||| |||||| ||| ||||||    
T  4332971 ataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtg 4332908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 18622670 - 18622615
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||| || |||||||||| |||||||| ||||||| | ||||||||    
T  18622670 tgacacgacaccaacacgtataattacactgaattatgtgattttattaaattatt 18622615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 31808126 - 31808063
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||| |||||||| ||||||| | |||||||| |||||||| |  ||||||||||    
T  31808126 acatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 896260 - 896198
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||| ||||||||||| ||| ||||||||||||| |||| || ||||| || |||||||||    
T  896260 acatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 5367251 - 5367201
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatt 5367201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 18420430 - 18420484
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||| ||||| | || ||||||| ||||||||||| ||||||||||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattatt 18420484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 22084848 - 22084882
Alignment:
Q  182 aattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| |||||||||||||||||||||||||||    
T  22084848 aattacactgaattatatgattttctcaaattatt 22084882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 22557010 - 22556964
Alignment:
Q  176 acatataattacattgaattatatgatt-ttctcaaattattggcgg 221  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||    
T  22557010 acatataattacattgaattatatgattattttcaaattattagcgg 22556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 23354669 - 23354731
Alignment:
Q  183 attacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| | |||||||| ||||||||||||||||  | ||||||||||||| ||||| |||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 1328023 - 1327978
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||| | |||||| |||||||||||||||||||| ||||||||    
T  1328023 ataattatactgaattttatgattttctcaaattattagcggtgtc 1327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 23355021 - 23355074
Alignment:
Q  192 aattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| ||||||||||||||||  | ||||||||||||| ||||| |||||    
T  23355021 aattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 29970545 - 29970622
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||| | | |||||| |||||| |||| |||  ||||||||||||||||| |||||||||   ||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 33861935 - 33861992
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattg 217  Q
    ||||||||| ||||| |||||| ||| |||| ||||||||  ||||||||||||||||    
T  33861935 ctgacacgataccaacacatatgattgcattaaattatatagttttctcaaattattg 33861992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 35449562 - 35449493
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||| | ||||||||||||||||||  | ||||  || ||||||||| ||||||    
T  35449562 acatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtc 35449493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 2415374 - 2415326
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||| ||||| | |||||||| ||||||||||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatt 2415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 17070936 - 17070980
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgatttt 205  Q
    |||||||||||||| | |||||||||||| ||||||||| |||||    
T  17070936 tgacacgacaccaatatatataattacatcgaattatataatttt 17070980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 18571021 - 18570981
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  18571021 acatatgattacattgaattatgtcattttctcaaattatt 18570981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 19613623 - 19613663
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  19613623 acatatcattacattgaattatgttattttctcaaattatt 19613663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 28121551 - 28121599
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||    
T  28121551 acaccaacacatataattacattgatttatgccattttctcaaattatt 28121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 30471087 - 30471047
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  30471087 acatataattacatcgaattatgtgattttctcaaaatatt 30471047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 39279724 - 39279684
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||| ||||||||||| ||||||    
T  39279724 acatataattacactgaattatttgattttctcatattatt 39279684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 44605149 - 44605189
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||| ||||||||||||||||| | ||||||||||||||||    
T  44605149 acatgtaattacattgaattatgttattttctcaaattatt 44605189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 25948848 - 25948966
Alignment:
Q  127 atgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtca 226  Q
    |||||||| ||||  | |||||||||  |||||| ||||||||||||| || |||||||||| |||||||| ||||||| |||||||||| || || ||     
T  25948848 atgaagcacggacattccttggattacacgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcg 25948947  T
Q  227 gcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||    
T  25948948 gcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 8383316 - 8383237
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||| | || |||||||||| ||||||||||||||||||||||||||| |||||||| || ||||| |||| |||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 8039831 - 8039893
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||||||| | ||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  8039831 gacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 5441022 - 5441110
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| ||||| | |||||  ||| ||||||||||| ||||||||||||||| || |||||| | || ||||||||||||||||    
T  5441022 cgtgtctgacacaacaccgacacata--attccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtc 5441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 34307793 - 34307859
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||| |||| ||| |||||||||||||||||| ||||||||||| |||  |||||||||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtc 34307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtca 226  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 15812832 - 15812893
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||| ||||||||| ||||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcggcgtcagcatgccagtgt 15812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 29112292 - 29112353
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||| ||||||||||||||||||||||| ||| | ||||||| | ||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtc 29112353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 16789077 - 16789021
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| || |||||||||| |||||||||||||||| | ||||||||    
T  16789077 ctgacacgacaccaacacttataattacactgaattatatgatttttttaaattatt 16789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 7928509 - 7928450
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||| | ||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 11313796 - 11313859
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| || ||||||||||||| | |||||| |||||||||||||||||| || |||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtc 11313859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 16192746 - 16192809
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||  |||||||    
T  16192746 gacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 10455852 - 10455770
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| ||||||||||||| | | |||||||||||||||| |||||| || ||||  || ||||| || |||||||    
T  10455852 acacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtc 10455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 21419455 - 21419505
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||| | |||||||||||||||||||||| ||||||| ||||||||    
T  21419455 cgacaccaacatatataattacattgaattatattattttcttaaattatt 21419505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 23184076 - 23184122
Alignment:
Q  170 accaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  23184076 accaacacatataattacatagaattatatgattttgtcaaattatt 23184122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 32804550 - 32804608
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    ||||||||||||| | |||||| ||||||||||||||||||  ||||||| ||||||||    
T  32804550 acatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 40150572 - 40150621
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatt 40150621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 29508493 - 29508453
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  29508493 acatataattacactgaattatatgattttttcaaattatt 29508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 4469897 - 4469830
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||||| |  || ||||| ||||||||||    
T  4469897 atatacttacactgaattatgtgattttcttaaattattggcggtattggcgtgtcaatgtctgtgtc 4469830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 14829752 - 14829670
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | || | |||||||  |||||||| ||||||| |||||||||| || ||||| || ||||||||||||||||    
T  14829752 gacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaatta 214  Q
    |||||||||||| ||||||||||||| | |||||| ||||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 49505164 - 49505227
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||| | |||||| |||||||||||||||||| ||||| || || |||| |||||    
T  49505164 acatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtc 49505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 49651782 - 49651853
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| |||||||    
T  49651782 gacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 5407260 - 5407306
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtc 5407306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 23870572 - 23870618
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgtc 23870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 47775791 - 47775745
Alignment:
Q  159 tctgacacgacaccaaaacatataattacattgaattatatgatttt 205  Q
    |||||||| ||||||| |||| ||||||||||||||||||| |||||    
T  47775791 tctgacacaacaccaacacatgtaattacattgaattatatcatttt 47775745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 48353731 - 48353781
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  48353731 cgacaccgatacatataattacaattaattatttgattttctcaaattatt 48353781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 8789550 - 8789599
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    ||||||| | |||||||||||||  ||||||| |||||||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 12704056 - 12704007
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| |||||||| || ||||||||||||||| | ||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtc 12704007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 13414528 - 13414487
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttct 207  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  13414528 cgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 17005632 - 17005669
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  17005632 tataattacactgaattatatgattttatcaaattatt 17005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 21720807 - 21720742
Alignment:
Q  182 aattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    ||||||| ||||||||  ||| |||||||||||||  ||||||| || |||||||||| |||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtccg 21720742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 27764749 - 27764716
Alignment:
Q  182 aattacattgaattatatgattttctcaaattat 215  Q
    |||||||||||||||||| |||||||||||||||    
T  27764749 aattacattgaattatataattttctcaaattat 27764716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 33359779 - 33359738
Alignment:
Q  207 tcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  33359779 tcaaattattagctgtgtcagcgtgtcagtgtctgtgtccgg 33359738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 35222997 - 35222956
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttct 207  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  35222997 cgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 3587335 - 3587383
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  3587335 acaccaacacatataattacattaaattatattattttgtaaaattatt 3587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 6525713 - 6525761
Alignment:
Q  199 tgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||||||||||||||| ||||||||  |||||||||||  |||||||    
T  6525713 tgattttctcaaattattagcggtgtcgacatgtcagtgtacgtgtccg 6525761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 9800103 - 9800027
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    ||||||||||| | || || |||||||  ||||||| | |||||||||||||||| | |||||| || |||||||||    
T  9800103 gacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 11252023 - 11251987
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattatt 11251987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 11493372 - 11493420
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||| |||||||| ||||||||||| |||||| | ||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtc 11493420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 12704088 - 12704056
Alignment:
Q  182 aattacattgaattatatgattttctcaaatta 214  Q
    |||||||||||||||| ||||||||||||||||    
T  12704088 aattacattgaattatgtgattttctcaaatta 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 15796309 - 15796373
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||||||||||| ||||||||||  | ||||| || ||||| |||| |||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtc 15796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 48202279 - 48202319
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| |||||| ||||||||||||| ||||    
T  48202279 acatataattacattaaattatgtgattttctcaaactatt 48202319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 3520352 - 3520421
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||| ||||||||||    
T  3520352 acatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 22602706 - 22602789
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | ||||||||||||| |||||||| |||||||||||||| |||  ||||||| || |||||||| |||||||    
T  22602706 gacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtc 22602789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 32308183 - 32308106
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||  | ||||| ||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||    
T  32308183 gacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 25791714 - 25791631
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||||||| | |||||||| |||||||| |||| ||| |||||||||| ||| |||||||| || ||||||||||||||||||    
T  25791714 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtccg 25791631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 5236049 - 5235966
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | | ||||||||||| | |||||||| ||||||| |||||||| ||||||||  | ||||||||||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtc 5235966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 15902885 - 15902802
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| ||||| | ||||||||||||| | |||||| ||||||| ||||||||||   |||||| |||||||||||||||||||    
T  15902885 gacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtc 15902802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 20549850 - 20549771
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||| |  ||||||||| ||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 42720900 - 42720963
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||||| |||||| ||||||| |||||||||| ||||||||| | ||||||||||    
T  42720900 acatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 5548745 - 5548671
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcat 230  Q
    ||||| ||||||||||  | ||||||||||||| |||||||| |||||||||||||||||  |||||||| ||||    
T  5548745 gtgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 35297669 - 35297722
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||| ||||||||||| | |||||||| ||||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatt 35297722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 17307956 - 17307904
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaatta 214  Q
    ||||||||||||| ||||||||||||| |||||||| | ||||||||||||||    
T  17307956 gacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 22868091 - 22868023
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    ||||||||||||| |||||||| ||||||||||| |||||| | |||||| || |||||||||| ||||    
T  22868091 acatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgt 22868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 27945105 - 27945021
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| | || | |||||||| |||||||| | |||||||||||||||| | |||||| || |||||||||| |||||    
T  27945105 tgacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 16341576 - 16341505
Alignment:
Q  145 ttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| | ||||| |||||||||||   ||||||||||||| | |||||| ||||||||||||||||||    
T  16341576 ttggattatgtgtgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatt 16341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 26329378 - 26329461
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| || | ||||||||||||| |||||| | || |||||||||||||||  || |||| || ||||||||||||||||    
T  26329378 gacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtc 26329461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||| | ||||||||||| | |||||||| |||||||||||||||||| ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 22484083 - 22484005
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| | ||||||||||| | ||||||||   ||||||| |||||||| |||||||| || ||||||||||||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 29787378 - 29787428
Alignment:
Q  175 aacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||| ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  29787378 aacacataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 6630909 - 6630986
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 240  Q
    |||||||| | | ||||||||||||| |||||||  ||| |||||||||||||| | |||||| || |||||||||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 7438750 - 7438693
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    ||||||||||||||||| ||||||| ||||||||||  | ||||| ||||||||||||    
T  7438750 taattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 8160479 - 8160414
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 227  Q
    ||||||| ||||| ||||||||||||| | |||||| | ||||||| |||||||| ||||||||||    
T  8160479 gacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtcag 8160414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 11890908 - 11890969
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| ||||||||||| | ||  ||||||||| |||||||||||||||| ||||||||||    
T  11890908 cgtgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatt 11890969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 21138987 - 21139072
Alignment:
Q  157 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||| ||||||||||| | ||||||||||||| | ||||||  |||||||||||||||||  ||||||   ||||||||||||||||||    
T  21138987 tgtccgacacgacaccgacacatataattacagt-aattat--gattttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 23191947 - 23191882
Alignment:
Q  174 aaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||| |||||||| |||| ||| |||||||||||||||||| |||||||| || | ||||||||    
T  23191947 aaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 38134416 - 38134473
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    |||||| ||||||||||||||| | ||||||||||||||||  |||||||| ||||||    
T  38134416 acatatgattacattgaattatgtcattttctcaaattattatcggtgtcaacatgtc 38134473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 38143281 - 38143232
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattatt 38143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 1401071 - 1401011
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||||| |||||||| ||| |||||||||||||| ||| | ||||| ||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtc 1401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 1433522 - 1433434
Alignment:
Q  157 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||| ||||||||||| | |||||||||||||   ||| || ||||||||||||||||||  ||||||| || ||||| |||| |||||    
T  1433522 tgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtc 1433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 5233698 - 5233638
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||| ||||| ||||||| ||||||||||||| |  ||||| ||||||||||||||||||    
T  5233698 gtgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattatt 5233638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 5409825 - 5409909
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||| ||||||||||| | || | ||||| || |||||||| ||||||| |||||||||| || || ||||| ||||||||||    
T  5409825 cgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 7758391 - 7758319
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagc 228  Q
    ||||| ||||||||||| | ||| ||||||| | |||||||||| ||||||| |||||||| | |||||||||    
T  7758391 gtgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtcagc 7758319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 11700848 - 11700800
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagc 228  Q
    |||||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattattaacggtgtcagc 11700800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 33384573 - 33384641
Alignment:
Q  157 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||| ||||| ||||||| ||||||||||||| | ||||||| |||||||||| ||||||  |||||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 7197312 - 7197375
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    |||||||||||||||| |||||||| | |||||||| || ||||| || ||||| |||||||||    
T  7197312 taattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 11722122 - 11722177
Alignment:
Q  190 tgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| ||||||||||||||| || |||||||| || |||||||||| |||||    
T  11722122 tgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtc 11722177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 18013070 - 18013153
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||  | ||||||||||||| |||||||| | ||||| | |||||||| |  ||||||| ||||||||||| |||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtc 18013153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 30731080 - 30731037
Alignment:
Q  182 aattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 3142074 - 3142128
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||| ||||| | |||||| |||||||||||||||||||||| ||||| |||||    
T  3142074 gacacaacaccgacacatatgattacattgaattatatgatttactcaatttatt 3142128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 7058489 - 7058435
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| || | |||||||| ||||||| |||||||| ||||||||||    
T  7058489 gacacgacaccaacacttgtaattacactgaattacatgattttttcaaattatt 7058435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 7328687 - 7328741
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||| | ||||||||||||| | |||||| | ||||||||||||||||    
T  7328687 gacacgacaccgacacatataattacactaaattatgttattttctcaaattatt 7328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 17851480 - 17851434
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggt 222  Q
    ||||||||||||| |||||||| ||||||||| |||||||| |||||    
T  17851480 acatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 23128658 - 23128728
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    |||| ||||| | |||||| |||||| ||||||||||| |||||||||||||||   ||||||||| ||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgtgtc 23128728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 30516374 - 30516408
Alignment:
Q  183 attacattgaattatatgattttctcaaattattg 217  Q
    ||||||||||||||||| |||||||||||||||||    
T  30516374 attacattgaattatatcattttctcaaattattg 30516408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 46332993 - 46332919
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 240  Q
    |||||||||||||| |||||||||| |||| | | ||||||||||| ||||  |  ||||| |||||||||||||    
T  46332993 cgacaccaaaacatttaattacattcaattgtgtcattttctcaaactattaccactgtcaacatgtcagtgtct 46332919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 5835305 - 5835232
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 240  Q
    |||||| | ||||||||||||| |||||||| | ||||||||||| |||| | |||||| || | |||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtct 5835232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    ||||||| | ||||||||||||| |||||| | |||||||||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 19930951 - 19930992
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattg 217  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  19930951 acatataattacattgaattatgtcattttatcaaattattg 19930992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 24146874 - 24146825
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| | ||||||||||| |||||||||| ||||||||| ||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattatt 24146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 24339705 - 24339628
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||| ||||    
T  24339705 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtc 24339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 2424659 - 2424623
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatt 2424623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 8239060 - 8239100
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| ||||||||| |||||||| ||||||||    
T  8239060 acatataattacactgaattataagattttcttaaattatt 8239100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 12843170 - 12843226
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattg 217  Q
    |||||||||||  | |||| ||||||||||||||||| | ||||| |||||||||||    
T  12843170 tgacacgacactgacacatgtaattacattgaattatgtaattttatcaaattattg 12843226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||| | || |||||||||| |||| ||| |||||||||||||||||| || |||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 21828415 - 21828483
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    ||||| ||||||| || ||||| |||||||||||||||| |  ||||||| || |||||||||| ||||    
T  21828415 acatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 27093424 - 27093472
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 27184877 - 27184829
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 36314629 - 36314677
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| |||||| ||||||||||| ||| | ||||||||||||||||    
T  36314629 acaccaacacatatgattacattgaaatatgtcattttctcaaattatt 36314677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 9629442 - 9629374
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 7996389 - 7996451
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  7996389 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 7996451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 8022412 - 8022350
Alignment:
Q  177 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  8022412 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 8022350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 9027247 - 9027158
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| ||||||||||| | |||||||||||||  ||||||| ||||| |||||||||||| |||||||| || |||||||||| |||||    
T  9027247 gtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 20371110 - 20371192
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 248  Q
    ||||||| | ||||||||| ||||||| |||| |||||||||||||||||| |||||||| || ||||| |||| ||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccgg 20371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 5732471 - 5732583
Alignment:
Q  122 gagctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcgg 221  Q
    ||||||||||||| |||| || || ||||||||||||||     ||||||| | ||||||||||||| | || ||| ||||||||||||||||||  |||    
T  5732471 gagctatgaagcatggacactcctcggattaggcgtgtc-----cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacgg 5732565  T
Q  222 tgtcagcatgtcagtgtc 239  Q
    |||| || ||||||||||    
T  5732566 tgtcggcgtgtcagtgtc 5732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 7265593 - 7265666
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||| | ||||||||||||| |||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 9025484 - 9025553
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||| ||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  9025484 gtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 19040401 - 19040341
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagt 236  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||| || |||||||    
T  19040401 acatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 30866154 - 30866202
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  30866154 acatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 7378038 - 7377979
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 9617494 - 9617443
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 9658926 - 9658859
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| |||||||| ||||||||| |||||||| |||||||| || |||||||||| |||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 32320665 - 32320740
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtg 237  Q
    ||||||||||| | ||||||||| |||||||||||| ||||||| ||||||||||  |||||||||| | ||||||    
T  32320665 gacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 32320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 34073343 - 34073426
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| |  |||||||||||| ||||||||  ||||||||||||||||| ||| |||  ||||||||||||| |||||    
T  34073343 gacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtc 34073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 677900 - 677818
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 244  Q
    |||||||||||||  ||||||| |||| |  ||||||||||||||||||||||||  | ||||| || |||||||||||||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 3398680 - 3398599
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||| | || |||||||||| |||||||||||||||| |||||||||| || ||||| || |||||||||| |||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 7086865 - 7086775
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| ||||| | ||||||||||||| | |||||| |||||||||||||||||| || ||| |  | |||| |||||||||||    
T  7086865 cgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtc 7086775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 10294169 - 10294087
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||| | |||||||||||||||||| |||  |||| |||||||||||| ||||| || |||||||||| || |||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtc 10294087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 7723246 - 7723323
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||| | |||||||||||   ||||||||||||||||||||||||||| || |||||  | ||||||||||    
T  7723246 gacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 13360373 - 13360420
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaatta 214  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 20518416 - 20518325
Alignment:
Q  155 cgtgtctgacac-gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| |||||||| ||||||||||| | ||| |||| | ||||||||||||| || | ||||| ||  ||||||||||||||||    
T  20518416 cgtgtctgacaccgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgttagtgtgtcagtgtctgtgtc 20518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 13364715 - 13364773
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    |||||| |||||| ||||||||||||||||||||||||||  || ||||| ||||||||    
T  13364715 acatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 26314646 - 26314684
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  26314646 atataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 97819 - 97864
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaatt 213  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  97819 acaccaaaatatataattacatttaatcatatgattttctcaaatt 97864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 5462733 - 5462684
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcag 227  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtcag 5462684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 10770663 - 10770724
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||| | || | |||||||| |||||||| ||||||| ||||||||||    
T  10770663 cgtgtctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 10770724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 13851785 - 13851716
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||||  | |||||||||||||||| ||||||||  | |||||||||| |||||    
T  13851785 acatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 16766760 - 16766683
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||||||||    
T  16766760 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 33419231 - 33419182
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| |||||||||||||||||||||||| | ||| ||||||||||    
T  33419231 gacaccaacacatataattacattgaattatatcaatttttcaaattatt 33419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 2117175 - 2117076
Alignment:
Q  125 ctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    |||||||||| |||| || ||  |||||||| |||| |||||||||| | | | ||||||| ||||||||||| ||||||| |||||||||| | |||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacacgacacgaca-cttataattgcattgaattatgtgattttttcaaattattagaggtgt 2117077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 7151473 - 7151421
Alignment:
Q  164 cacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||| ||||||||||||| | |||||| ||||||| ||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatt 7151421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 7938162 - 7938102
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||||| | |||||||||||||| |||||||||| || ||||| || ||||||||||    
T  7938162 tataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 9024165 - 9024225
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 215  Q
    |||||| ||||||||||  | |||||| ||||||||||||||| | |||||||||||||||    
T  9024165 cgtgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 26562752 - 26562676
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    ||||||||| | | ||||||||||||| |||||||| ||||||||||||||| || || ||||| || |||| ||||    
T  26562752 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 33001289 - 33001357
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 234  Q
    ||||||| | ||||||||||||||| |||||| ||||||| |||||||||| || ||||| || |||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 10339135 - 10339198
Alignment:
Q  176 acatataatta-cattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    ||||||||||| || |||||||| |||||||||||||||| | |||||||| || |||||||||    
T  10339135 acatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgt 10339198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 11424707 - 11424750
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgatttt 205  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  11424707 gacacaacaccaacacatataattatattgaattatatgatttt 11424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 19044529 - 19044450
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||| |||||| | ||||||||| ||| |||||||| |||| ||||||||||||| |  ||||| || ||||||||||    
T  19044529 ctgacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 21924935 - 21924994
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||| | ||||||||||||| |||||||| |||| ||||||||||||| || |||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtc 21924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 13815505 - 13815451
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||| | |||||||| | ||||||||||| ||||||||||||| ||||    
T  13815505 gacacgacaccgagacatataacttcattgaattatgtgattttctcaaaatatt 13815451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 15443758 - 15443704
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||| ||||||| | ||||||||| |||||||||| | ||||||||||||||||    
T  15443758 gacacaacaccaacatatataattatattgaattatgttattttctcaaattatt 15443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 34290073 - 34290156
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| | |||||  |||||| |||||||| ||||| || ||||||||| |  ||||| |||||||||||| ||||||    
T  34290073 ctgacacgacaccgacacata--attacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtc 34290156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 6299554 - 6299521
Alignment:
Q  183 attacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||||| ||||||||||||||||    
T  6299554 attacattgaattatatcattttctcaaattatt 6299521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 6306364 - 6306331
Alignment:
Q  183 attacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||||| ||||||||||||||||    
T  6306364 attacattgaattatatcattttctcaaattatt 6306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 8389485 - 8389522
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  8389485 tataattacactgaattatatgattttcttaaattatt 8389522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 9195751 - 9195804
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| | ||||||||||||| | |||||| | ||||||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatt 9195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 11591880 - 11591917
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaatt 213  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  11591880 acatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 32298608 - 32298677
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagt 236  Q
    |||||||| ||||||||||||| | |||||| ||||  ||| |||||||| |||||||  ||||||||||    
T  32298608 gacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagt 32298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 32299321 - 32299284
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  32299321 tataactacattgaattatgtgattttctcaaattatt 32299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 32839660 - 32839725
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||| | || ||||| ||||||||||||||||||  | |||||||||||||  ||||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattattaacagtgtcagcatgtcgatgtctgtgtc 32839725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 33340946 - 33340995
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| |||||| ||| |||||| |||| ||||||||||||||||||    
T  33340946 gacaccaacacatatgattccattgagttatgtgattttctcaaattatt 33340995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 35125152 - 35125103
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| |||||| ||| |||||| |||| ||||||||||||||||||    
T  35125152 gacaccaacacatatgattccattgagttatgtgattttctcaaattatt 35125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 1532289 - 1532241
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||||||||| |||||||| | ||||| |||||||||| |||||||    
T  1532289 acatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 16833352 - 16833288
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||| ||| ||||||| |||||||||| |  ||||| || ||||||||||||||||    
T  16833352 taattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 16833288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 17302601 - 17302529
Alignment:
Q  181 taattacattgaattatatga-ttttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatct 252  Q
    ||||||||||||||||| ||| |||| |||||||||| |  |||||||| |||||||||  ||||||| ||||    
T  17302601 taattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtccgtatct 17302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 19147910 - 19147842
Alignment:
Q  157 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||| ||||||||||| | ||||||||||||  |||  ||||||||||||| ||||||||  |||||||    
T  19147910 tgtcggacacgacaccgacacatataattactctgatctatatgattttcttaaattattaacggtgtc 19147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 21142167 - 21142127
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| || | |||||||||||||||||||||||||||    
T  21142167 acatataactagactgaattatatgattttctcaaattatt 21142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 24832637 - 24832597
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||| | ||||||| |||||||||||||||||    
T  24832637 acatataattacactaaattataagattttctcaaattatt 24832597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 25038086 - 25038150
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| | |||||| | ||||||||||||||||  |||||||| | ||||||| ||||||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 31579239 - 31579275
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatt 31579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 99957 - 99879
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||  |||||||  |||||| |||||    
T  99957 tgacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgtc 99879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 90890 - 90823
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| |||||||||||||||||||||||||||   |||||  |  ||||||||||||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtc 90823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 12606830 - 12606888
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 24362212 - 24362281
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| |||||||| ||||| |||||||||||| |||||||| || |||| |||||||||||    
T  24362212 acatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtc 24362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 21465477 - 21465412
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||||| || | ||||||||| ||||||||||||||| |||||||||| || |||||    
T  21465477 ctgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 31236587 - 31236636
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||    
T  31236587 acatataattacattgaattatgtgattttctcaaattattagcagtgtc 31236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 34897134 - 34897085
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  34897134 acatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 37283824 - 37283889
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||| |||||||| ||||||||||| |||||| |||||| | ||||||||||||| |||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtc 37283889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 24669477 - 24669413
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||| | |||| |||||||||||  |||||||||| ||||||||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtc 24669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 25172693 - 25172777
Alignment:
Q  161 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||||||| | ||||||||||||||| || ||| | ||||| |||||||||| || |||||||||| ||||| || |||||    
T  25172693 tgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtatccgtgtc 25172777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 14634137 - 14634200
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| | ||||||||||| |||||||||| ||||||| ||||| || ||||||||    
T  14634137 gacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtc 14634200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 20679408 - 20679471
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 242  Q
    |||||||||| |||| ||| |||||||||||||||||| | ||||||  |||||||||||||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 22652039 - 22651956
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||| | || | |||||| |||||||||| ||||||| |||||||||| || ||||| || |||||||||| |||||    
T  22652039 gacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 39954289 - 39954352
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||||||||| | |||||| |||||||||||||||||| |||||||| || |||| |||||    
T  39954289 acatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 4611583 - 4611534
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| |||||||| | |||||||||||||||| ||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||| | ||||||||||||| |||||||| ||||||||| ||||||||   |||||| || ||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 11803321 - 11803268
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattatt 11803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 11927083 - 11927136
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| | ||||||||||||| |||||||| ||||||| ||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatt 11927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 12559107 - 12559156
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  12559107 gacaccaatacatatgattacactgaattatatcattttctcaaattatt 12559156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 13844596 - 13844669
Alignment:
Q  166 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||| || ||||| || |||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 4673440 - 4673504
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||| ||||||||| ||||||||||  | ||||| || ||||||||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtc 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 20785475 - 20785523
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgt 224  Q
    ||||||||||||||| |||||| |||||| ||||||||||| |||||||    
T  20785475 acatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 24017452 - 24017488
Alignment:
Q  180 ataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||||||||| ||||||||||||    
T  24017452 ataattacattgaattatatgattgtctcaaattatt 24017488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 34201056 - 34201096
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatt 34201096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 36934730 - 36934670
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||| |||| ||||||||||||| |||||||| ||||||| || ||||||| ||||||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 3508108 - 3508061
Alignment:
Q  169 caccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatt 3508061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 12985439 - 12985401
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattatt 216  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  12985439 atatgattacattgaattatgtgattttctcaaattatt 12985401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 14134746 - 14134708
Alignment:
Q  178 atataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattatt 14134708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 31109528 - 31109598
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtcc 246  Q
    ||||||| ||| | |||||| | ||||||||||||||||||  ||||||| || |||||||||| ||||||    
T  31109528 acatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtcc 31109598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 3025597 - 3025560
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatt 3025560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 11944727 - 11944674
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||| | ||||||||||||| ||| |||| ||||||| ||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatt 11944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 14731761 - 14731712
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| | |||||| |||||||||||||||||| || |||||    
T  14731761 acatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 18069154 - 18069191
Alignment:
Q  189 ttgaattatatgattttctcaaattattggcggtgtca 226  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  18069154 ttgaattatttgattttctcaaattattagcggtgtca 18069191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 27213596 - 27213547
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    ||||||||||||| |||||||| ||||||||| |||||||| || |||||    
T  27213596 acatataattacagtgaattatgtgattttctgaaattattagcagtgtc 27213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 28384988 - 28385073
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| |||||| | ||||||||||||| ||||||||  |||||  ||| ||||||  ||||||| | ||||||||||| |||||    
T  28384988 ctgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtc 28385073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 8798841 - 8798881
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
T  8798841 acatataattatattgaattatgttattttctcaaattatt 8798881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 12124138 - 12124086
Alignment:
Q  195 tatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 247  Q
    |||||||||||||||||||||| |||||||  || |||| |||||||| ||||    
T  12124138 tatatgattttctcaaattattagcggtgttggcttgtccgtgtctgtatccg 12124086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 18067958 - 18067994
Alignment:
Q  190 tgaattatatgattttctcaaattattggcggtgtca 226  Q
    |||||||| |||||||||||||||||| |||||||||    
T  18067958 tgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 29447128 - 29447160
Alignment:
Q  184 ttacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||| ||||||||||||||||||    
T  29447128 ttacattgaattatgtgattttctcaaattatt 29447160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 37225753 - 37225793
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  37225753 acatatgattacattgaattatgttattttctcaaattatt 37225793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 40332235 - 40332191
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||| |||||||| |||||||||||||||||| || |||||    
T  40332235 taattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 21149 - 21023
Alignment:
Q  125 ctatgaagcaaggacgcttcttggattaggcgtgtctgacac------gacaccaaaacatataattacattgaattatatgattttctcaaattattgg 218  Q
    |||||||||| |||  ||||| ||||||||||||||||||||      || ||| | ||||||||||| |  || |||| ||||||||||||||||||      
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaa 21050  T
Q  219 cggtgtcagcatgtcagtgtctgtgtc 245  Q
    | ||||||||||||||||||| |||||    
T  21049 ccgtgtcagcatgtcagtgtccgtgtc 21023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 44521 - 44592
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 233  Q
    ||||||| ||| | ||||||||||||| |||||||| ||||||||||||||| || ||||||||||| ||||    
T  44521 gacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagcttgtc 44592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 28918 - 28837
Alignment:
Q  157 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||||||| ||||| | ||||||||||||||||||||||  |||||||| ||||||||  ||||||| || ||| |||||    
T  28918 tgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgt 28837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 53243 - 53170
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcag 235  Q
    |||||| |||| | || |||||||||| |||||||| |||||||||||||||||||||||| || || ||||||    
T  53243 gacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 135302 - 135391
Alignment:
Q  156 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| ||||||||||| | |||||||||||||  ||||||| |||||||||||||||||| || ||||| |  |||  |||||||||||    
T  135302 gtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtc 135391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 137845 - 137789
Alignment:
Q  160 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||||||||||| |||||| | |||| |||||| | ||||||||| ||||||||    
T  137845 ctgacacgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 9744 - 9819
Alignment:
Q  163 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 238  Q
    |||||||||| | ||||||||||||| |||||||  |||||||||||||||||| | || ||| ||||||| ||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 92851 - 92793
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 239  Q
    |||||||| |||||||| | |||||||||||||||| |||||||| || ||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 26442 - 26373
Alignment:
Q  176 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||  |||||||||||| |||||||||||||||||| | ||||||  | ||||| ||||||||||    
T  26442 acatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 240022 - 240071
Alignment:
Q  167 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattatt 240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1449 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 1262 - 1305
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgatttt 205  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||    
T  1262 gacacgacaccaaaatatataattacatcgaattatataatttt 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 263368 - 263451
Alignment:
Q  162 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||  | || |||||||||| |||||||| || ||||||||||||||| || ||||   |||||||||||| |||||    
T  263368 gacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtc 263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 23490 - 23400
Alignment:
Q  155 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||| ||||||||||| | || |||||||||| |||||||| ||||||| |  | |||||  | ||||| || ||||||||||||||||    
T  23490 cgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtc 23400  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 102948 - 102914
Alignment:
Q  182 aattacattgaattatatgattttctcaaattatt 216  Q
    |||||||||||||||||| ||||||||||||||||    
T  102948 aattacattgaattatatcattttctcaaattatt 102914  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 225281 - 225347
Alignment:
Q  179 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||||||||||| ||||| | ||||||||||||||||  | ||||| || |||||||||| |||||    
T  225281 tataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 6372 - 6312
Alignment:
Q  165 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 225  Q
    |||||||| | ||||||||||||||||||||||   ||||| |||||||||| || |||||    
T  6372 acgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

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Target: scaffold0320 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 17038 - 17086
Alignment:
Q  168 acaccaaaacatataattacattgaattatatgattttctcaaattatt 216  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||    
T  17038 acaccaacacatataattacattgatttatgccattttctcaaattatt 17086  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 13444 - 13380
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| || |||||||| |||||||||||||||||| |  ||||| || |||||||||| |||||    
T  13444 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 21883 - 21947
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    ||||| || |||||||| |||||||||||||||||| |  ||||| || |||||||||| |||||    
T  21883 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 3864 - 3928
Alignment:
Q  181 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 245  Q
    |||||||| |||||||| ||||||| | ||||||||  | ||||| |||| ||||||||||||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtc 3928  T

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