View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12613_low_5 (Length: 382)

Name: NF12613_low_5
Description: NF12613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12613_low_5
NF12613_low_5
[»] chr7 (49 HSPs)
chr7 (1-193)||(11685331-11685523)
chr7 (63-363)||(45464683-45464983)
chr7 (217-369)||(11684057-11684209)
chr7 (63-363)||(4321375-4321673)
chr7 (60-193)||(34784308-34784441)
chr7 (18-369)||(38614327-38614669)
chr7 (64-369)||(2168343-2168649)
chr7 (63-363)||(34692250-34692554)
chr7 (63-363)||(48302444-48302744)
chr7 (63-292)||(1547241-1547467)
chr7 (59-344)||(3690440-3690725)
chr7 (63-172)||(30108857-30108966)
chr7 (63-369)||(23954794-23955099)
chr7 (202-363)||(30109024-30109185)
chr7 (78-369)||(46994970-46995261)
chr7 (62-344)||(36756398-36756681)
chr7 (62-344)||(36762195-36762478)
chr7 (63-134)||(19712014-19712085)
chr7 (62-193)||(36766074-36766205)
chr7 (78-192)||(40785216-40785330)
chr7 (59-193)||(46810995-46811129)
chr7 (59-173)||(7403476-7403590)
chr7 (65-193)||(8421712-8421840)
chr7 (60-178)||(13036191-13036309)
chr7 (59-193)||(45360929-45361062)
chr7 (8-85)||(19712098-19712175)
chr7 (65-193)||(35342722-35342850)
chr7 (61-193)||(37791965-37792097)
chr7 (60-194)||(23904917-23905052)
chr7 (63-193)||(6605032-6605162)
chr7 (59-193)||(13169302-13169435)
chr7 (59-193)||(39857999-39858133)
chr7 (63-193)||(47384608-47384738)
chr7 (202-307)||(48705396-48705499)
chr7 (264-349)||(40785079-40785164)
chr7 (121-193)||(48850929-48851001)
chr7 (60-115)||(12904046-12904101)
chr7 (60-178)||(48311427-48311543)
chr7 (59-149)||(3921007-3921096)
chr7 (163-250)||(12903939-12904026)
chr7 (63-193)||(38549845-38549975)
chr7 (60-192)||(22155495-22155626)
chr7 (60-192)||(22211410-22211541)
chr7 (61-193)||(38472573-38472705)
chr7 (60-191)||(34775362-34775493)
chr7 (226-280)||(8421867-8421921)
chr7 (8-54)||(34784243-34784289)
chr7 (71-127)||(27956933-27956988)
chr7 (60-96)||(48227707-48227743)
[»] chr3 (39 HSPs)
chr3 (59-367)||(26448037-26448342)
chr3 (61-281)||(30501391-30501610)
chr3 (63-267)||(40962981-40963184)
chr3 (61-369)||(1847154-1847462)
chr3 (63-363)||(41945600-41945898)
chr3 (61-357)||(32842721-32843017)
chr3 (67-293)||(49494787-49495011)
chr3 (59-360)||(48634872-48635173)
chr3 (59-348)||(24382004-24382293)
chr3 (63-178)||(37865676-37865791)
chr3 (78-340)||(31885827-31886088)
chr3 (59-193)||(2975749-2975883)
chr3 (63-172)||(33051144-33051253)
chr3 (161-369)||(33112233-33112441)
chr3 (235-363)||(37886239-37886367)
chr3 (159-363)||(23775149-23775353)
chr3 (59-369)||(35861831-35862141)
chr3 (217-369)||(45897487-45897640)
chr3 (231-369)||(2975887-2976024)
chr3 (59-344)||(18429030-18429314)
chr3 (59-344)||(45255773-45256058)
chr3 (78-344)||(33851291-33851555)
chr3 (60-193)||(2378576-2378709)
chr3 (60-193)||(42282135-42282268)
chr3 (78-285)||(10380511-10380719)
chr3 (59-193)||(610850-610984)
chr3 (63-193)||(51686013-51686143)
chr3 (60-193)||(17516608-17516741)
chr3 (60-193)||(21350257-21350390)
chr3 (60-193)||(30598658-30598791)
chr3 (59-191)||(44268301-44268432)
chr3 (316-362)||(13466609-13466655)
chr3 (59-193)||(23887489-23887622)
chr3 (59-193)||(27897512-27897646)
chr3 (60-193)||(23875963-23876095)
chr3 (60-185)||(45897342-45897467)
chr3 (59-193)||(23291889-23292023)
chr3 (8-54)||(30501321-30501367)
chr3 (316-369)||(22218719-22218772)
[»] chr2 (29 HSPs)
chr2 (63-363)||(11021825-11022125)
chr2 (63-363)||(28247674-28247974)
chr2 (63-193)||(363354-363485)
chr2 (63-352)||(11313127-11313402)
chr2 (63-363)||(38149535-38149836)
chr2 (63-193)||(7744932-7745062)
chr2 (61-368)||(10715400-10715690)
chr2 (60-193)||(17948601-17948734)
chr2 (59-363)||(37418263-37418569)
chr2 (63-369)||(35575-35881)
chr2 (63-186)||(2359394-2359516)
chr2 (60-363)||(42880309-42880610)
chr2 (59-193)||(34400628-34400762)
chr2 (59-193)||(42517877-42518011)
chr2 (65-193)||(15373554-15373683)
chr2 (160-320)||(40150664-40150825)
chr2 (59-271)||(40152135-40152346)
chr2 (60-192)||(17697776-17697903)
chr2 (59-193)||(19907036-19907170)
chr2 (226-344)||(42002990-42003108)
chr2 (65-193)||(41708097-41708225)
chr2 (79-193)||(26581316-26581430)
chr2 (59-140)||(16377082-16377163)
chr2 (60-115)||(4047703-4047758)
chr2 (36-74)||(363509-363547)
chr2 (60-101)||(161813-161854)
chr2 (60-105)||(2359542-2359587)
chr2 (121-193)||(14387765-14387837)
chr2 (65-193)||(31474719-31474847)
[»] chr1 (26 HSPs)
chr1 (63-363)||(5784366-5784666)
chr1 (60-369)||(42558248-42558546)
chr1 (63-293)||(51123115-51123342)
chr1 (63-363)||(11152837-11153136)
chr1 (76-193)||(25172701-25172818)
chr1 (59-369)||(31803190-31803500)
chr1 (59-369)||(46637056-46637365)
chr1 (59-344)||(45379374-45379658)
chr1 (65-344)||(44158807-44159088)
chr1 (59-344)||(42135761-42136045)
chr1 (59-191)||(6576774-6576906)
chr1 (226-369)||(18183063-18183205)
chr1 (59-344)||(35478378-35478660)
chr1 (59-193)||(50554500-50554634)
chr1 (59-190)||(33679549-33679680)
chr1 (59-193)||(31237139-31237273)
chr1 (60-193)||(18058121-18058254)
chr1 (63-193)||(15105986-15106116)
chr1 (60-193)||(6817200-6817333)
chr1 (110-192)||(18180818-18180900)
chr1 (60-193)||(45045232-45045365)
chr1 (78-193)||(27952167-27952282)
chr1 (59-193)||(2870712-2870845)
chr1 (59-193)||(3012175-3012309)
chr1 (226-344)||(33679696-33679814)
chr1 (63-101)||(33599542-33599580)
[»] chr8 (46 HSPs)
chr8 (8-193)||(11031643-11031828)
chr8 (63-363)||(40019448-40019748)
chr8 (60-271)||(25356622-25356834)
chr8 (59-369)||(33369050-33369362)
chr8 (72-363)||(28432520-28432810)
chr8 (60-369)||(9876053-9876361)
chr8 (63-193)||(10269206-10269336)
chr8 (59-349)||(461467-461756)
chr8 (63-349)||(33158951-33159236)
chr8 (63-193)||(9186302-9186432)
chr8 (60-358)||(38881691-38881992)
chr8 (63-193)||(10268093-10268223)
chr8 (63-293)||(44620244-44620472)
chr8 (59-344)||(1321829-1322115)
chr8 (59-191)||(10770636-10770768)
chr8 (60-165)||(25373335-25373440)
chr8 (59-140)||(25705571-25705652)
chr8 (59-314)||(42895061-42895317)
chr8 (63-193)||(15684048-15684178)
chr8 (60-166)||(25402504-25402610)
chr8 (60-166)||(25707013-25707119)
chr8 (88-193)||(12515395-12515499)
chr8 (59-178)||(11719746-11719865)
chr8 (59-126)||(25370798-25370865)
chr8 (226-369)||(33748793-33748935)
chr8 (60-193)||(17807313-17807446)
chr8 (59-369)||(31822975-31823276)
chr8 (62-193)||(11790496-11790627)
chr8 (59-193)||(32823938-32824072)
chr8 (202-347)||(25371636-25371781)
chr8 (8-83)||(9186447-9186522)
chr8 (59-178)||(24527184-24527303)
chr8 (59-177)||(37525149-37525267)
chr8 (59-193)||(41041032-41041166)
chr8 (60-193)||(13484831-13484964)
chr8 (264-349)||(37525333-37525418)
chr8 (159-271)||(8655640-8655752)
chr8 (60-193)||(41824261-41824394)
chr8 (65-193)||(31199781-31199909)
chr8 (78-193)||(33748644-33748759)
chr8 (316-369)||(11719994-11720047)
chr8 (60-193)||(22273535-22273668)
chr8 (61-193)||(29693963-29694095)
chr8 (297-344)||(32823816-32823863)
chr8 (316-369)||(11790317-11790370)
chr8 (331-363)||(42895321-42895353)
[»] chr4 (36 HSPs)
chr4 (63-363)||(39922506-39922806)
chr4 (63-363)||(39084651-39084951)
chr4 (63-363)||(39190318-39190618)
chr4 (63-363)||(42879576-42879876)
chr4 (63-363)||(43778681-43778979)
chr4 (63-363)||(5485551-5485851)
chr4 (63-362)||(44993100-44993399)
chr4 (64-193)||(13438146-13438275)
chr4 (63-363)||(32653130-32653430)
chr4 (74-259)||(25994708-25994897)
chr4 (63-193)||(230740-230869)
chr4 (59-369)||(4519959-4520270)
chr4 (78-344)||(44556917-44557183)
chr4 (120-192)||(39294553-39294625)
chr4 (59-343)||(27626246-27626530)
chr4 (60-349)||(51041027-51041314)
chr4 (61-173)||(28100865-28100977)
chr4 (61-193)||(13449984-13450107)
chr4 (59-193)||(2691684-2691818)
chr4 (60-193)||(20820290-20820423)
chr4 (59-337)||(35997284-35997568)
chr4 (10-86)||(39294645-39294721)
chr4 (65-193)||(47942413-47942541)
chr4 (60-193)||(54387537-54387670)
chr4 (255-362)||(10544498-10544605)
chr4 (78-193)||(44793243-44793358)
chr4 (59-193)||(11254378-11254512)
chr4 (65-150)||(10544693-10544778)
chr4 (59-140)||(26397635-26397715)
chr4 (60-193)||(49524394-49524527)
chr4 (59-193)||(35402069-35402202)
chr4 (329-369)||(27385940-27385980)
chr4 (8-86)||(230650-230728)
chr4 (208-369)||(28101018-28101179)
chr4 (60-97)||(42982211-42982248)
chr4 (60-96)||(20494146-20494182)
[»] chr6 (12 HSPs)
chr6 (63-363)||(17950853-17951152)
chr6 (63-363)||(35174674-35174974)
chr6 (61-357)||(17936042-17936339)
chr6 (63-363)||(34344824-34345123)
chr6 (63-191)||(4289710-4289838)
chr6 (12-185)||(31210129-31210313)
chr6 (59-193)||(33277101-33277234)
chr6 (60-193)||(7371453-7371586)
chr6 (61-185)||(30639903-30640027)
chr6 (59-178)||(11356803-11356922)
chr6 (63-140)||(33267342-33267419)
chr6 (73-149)||(14337985-14338061)
[»] chr5 (33 HSPs)
chr5 (59-193)||(1344478-1344612)
chr5 (63-363)||(42619581-42619875)
chr5 (63-188)||(24497749-24497874)
chr5 (59-369)||(18726853-18727164)
chr5 (59-361)||(38176923-38177225)
chr5 (59-361)||(38204147-38204449)
chr5 (63-369)||(35291343-35291644)
chr5 (78-369)||(40330004-40330296)
chr5 (59-369)||(32089411-32089725)
chr5 (61-193)||(1343482-1343614)
chr5 (63-293)||(27350095-27350322)
chr5 (216-369)||(43317176-43317329)
chr5 (78-363)||(32836186-32836470)
chr5 (59-293)||(6116465-6116700)
chr5 (217-369)||(18341593-18341745)
chr5 (59-193)||(18623765-18623899)
chr5 (59-193)||(32134556-32134690)
chr5 (78-341)||(35400226-35400489)
chr5 (60-193)||(34328466-34328600)
chr5 (60-193)||(12738337-12738470)
chr5 (60-193)||(12801160-12801293)
chr5 (60-193)||(27077123-27077256)
chr5 (60-193)||(33257426-33257559)
chr5 (322-369)||(33257262-33257309)
chr5 (8-70)||(24497885-24497947)
chr5 (72-190)||(41494167-41494285)
chr5 (59-140)||(30464263-30464344)
chr5 (60-140)||(28035772-28035852)
chr5 (316-363)||(27076963-27077010)
chr5 (59-149)||(28821770-28821860)
chr5 (63-97)||(29620495-29620529)
chr5 (61-97)||(8541036-8541072)
chr5 (60-140)||(19998149-19998229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-293)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (59-280)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (59-126)||(2643-2710)
scaffold1041 (59-126)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (59-188)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (60-193)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (59-178)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 11685523 - 11685331
Alignment:
Q  1 ggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaaccctaatttt 100  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  11685523 ggtcgatagcgaccaaaatttccaaggatcaaattgattgatttgtagaaaatgctttgctctttctcccccaaatatataaaattggaaccctaatttt 11685424  T
Q  101 acaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  11685423 acaatctgtaatctacactccaaaatctccaaaatttctttcaataattagaggtaacgttcttcaccaattcaaaaagcttcaaaacctaat 11685331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 45464983 - 45464683
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||  ||| ||||||    
T  45464983 tttcttcctcaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttctttcaataattaagggtcacgttc 45464884  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||| | |||| || ||||||||    
T  45464883 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaatactgttgaaattgaatct 45464784  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  45464783 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 45464684  T
Q  363 g 363  Q
    |    
T  45464683 g 45464683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 217 - 369
Target Start/End: Complemental strand, 11684209 - 11684057
Alignment:
Q  217 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaa-gcaattatgaaagtcaagcttt 315  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||     
T  11684209 caaaatccccaaaatttcttcaagcaaaattgttcaatttgaatccgaaatgatgaggggtgg-tgtaagggcaaaaagcaattatgaaagtcgagcttc 11684111  T
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  11684110 atctttaagctccatgtttaatggtgatgtgagagtacttgaatgttggtgtcc 11684057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 4321375 - 4321673
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  4321375 tttcatccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctcaaaattttcttccaataattaagggtcacgttc 4321474  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  4321475 ttccccaaatcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 4321573  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  4321574 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatgttgatgtgagagtgcttgaatgtt 4321672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 34784308 - 34784441
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||| | |||||||||||||||||||    
T  34784308 ctctttcttccccaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttatgtcaataattagtggtaacg 34784407  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| || |||||||||||    
T  34784408 ttcttccccaattcaaaaaactccaaaccctaat 34784441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 369
Target Start/End: Complemental strand, 38614669 - 38614327
Alignment:
Q  18 atttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctaca 117  Q
    ||||| |||||  ||||| ||||||||| |||||||| ||||  ||||||||| ||  | ||||||||||||| |||||||  ||||| || ||||||      
T  38614669 atttcaaaggactaaattgattgatttgcagaaaatgttttgg-ctttcttccccagctgtataaaattggaatcctaattacacaatctgcaatcta-- 38614573  T
Q  118 ctccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattc 217  Q
         ||||  |||||||||| | ||||||| ||||||   ||||||| || ||||||||| ||||||||||||||        |||||||| ||||  |    
T  38614572 -----aaatcaccaaaatttcctccaataataagtggtccagttcttctccgattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagcc 38614478  T
Q  218 aaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttat 317  Q
    ||||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||    
T  38614477 aaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcat 38614379  T
Q  318 ctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||| |||||||| || |||||||||||||||||||||| ||||||| |||||    
T  38614378 cttcaagctccaagtctaatggtgatgtgagagtgcttaaatgttggtgtcc 38614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 64 - 369
Target Start/End: Complemental strand, 2168649 - 2168343
Alignment:
Q  64 ttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 163  Q
    ||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||| ||   |||||    
T  2168649 ttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtagtccagttct 2168550  T
Q  164 tccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 263  Q
    || |||||||||||| ||||||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||     
T  2168549 tctccaattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatcta 2168450  T
Q  264 aaatgatgaggggtgggtgtaaggg--caaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 361  Q
    |||||||| ||||||||  || |||   ||||  | ||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||  |||||    
T  2168449 aaatgatg-ggggtgggaatatgggaaaaaaaatagttatgaaagtcgagctttatcttcaagctccaagtttaatggtgatgtcagagtgctcaaatgt 2168351  T
Q  362 tgatgtcc 369  Q
    || |||||    
T  2168350 tggtgtcc 2168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 34692554 - 34692250
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||||||| ||||||    
T  34692554 tttcttccccaaatatataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattagtggtcacgttc 34692455  T
Q  163 ttccccaattcaaaaagcttcaaacc-ctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    |||||||| |||||||  | |||||| ||||    |        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || |||    
T  34692454 ttccccaaatcaaaaaattccaaaccactaatttttttttttttattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattg 34692355  T
Q  258 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 357  Q
    ||||| |||||||| ||||| |   || ||||||||  |  ||| |||||||||||| ||||| |  || |||||||||| ||||||||||| |||||||    
T  34692354 aatctaaaatgatg-ggggtagtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctacatgtttaatagtgatgtgagaatgcttga 34692256  T
Q  358 atgttg 363  Q
    ||||||    
T  34692255 atgttg 34692250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 48302444 - 48302744
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||  ||||| || ||| |||||||||   || ||||||    
T  48302444 tttcttccccaaatatataaaattgaaactctaattttacaatgtgtattctacactccaaaatctccaaatttgcttccaataattaagagtcacgttc 48302543  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || ||||| |     
T  48302544 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatatgaaaaccaaaatcttcaaaattcattcaagcaaaactgttgaaattgaaaca 48302643  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||  |||||||   || ||||||||  |  ||| ||||||||| || ||||| |   |||||||||||||||||||||||||||||||||||||    
T  48302644 aaaatgattgggggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcttccatgtttaatggtgatgtgagagtgcttgaatgtt 48302743  T
Q  363 g 363  Q
    |    
T  48302744 g 48302744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 292
Target Start/End: Complemental strand, 1547467 - 1547241
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1547467 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactctaaaattcccaaaa-ttctttcaataattagtggtaacgttc 1547369  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 261  Q
    |||||| ||| ||| | | ||||||||||||        ||||||| ||||||   |||||| |||||||| |||||| ||||| ||||  | ||||||     
T  1547368 ttccccgattgaaataacctcaaaccctaat--tttttgattgaattcgaaataaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaata 1547271  T
Q  262 tgaaatgatgaggggtgggtgtaagggcaaa 292  Q
     ||||||||| |||||||||||| |||||||    
T  1547270 cgaaatgatg-ggggtgggtgtatgggcaaa 1547241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 344
Target Start/End: Original strand, 3690440 - 3690725
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  3690440 gctctgtcttccccaattgtataaaattggaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 3690539  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  3690540 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 3690639  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |||||||||||   ||||||||  || ||| ||||    ||||||||||||||||| ||||| |||||||| ||||| ||||||||    
T  3690640 atctgaaatgaaatggggtgggaatatgggaaaaaattgttatgaaagtcaagcttcatcttcaagctccaagtttagtggtgatg 3690725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 30108857 - 30108966
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  30108857 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 30108956  T
Q  163 ttccccaatt 172  Q
    ||||||||||    
T  30108957 ttccccaatt 30108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 369
Target Start/End: Complemental strand, 23955099 - 23954794
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||| | |||||||||||||||||||||  ||||| |  | ||||||||| |||||  | |||||||| | ||||||| ||||||   ||||    
T  23955099 tttcttccccaattgtataaaattggaaccctaattacacaatcttcagtctacactctaaaataacaaaaatttcctccaataataagtggtccagttc 23955000  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    ||| ||||||||| || ||||||||||||||        |||||||| ||||   ||||||  ||||||||||| |||||||| | || |  ||||||||    
T  23954999 ttcgccaattcaacaaacttcaaaccctaatttcttggtattgaatctgaaagctaaaatcctcaaaatttcttgaagcaaaactattgacattgaatct 23954900  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
    ||||||| | |||||| |  || ||  |||| || |||||||| || ||||| |||||  ||||||| ||||||||||| ||| ||||||||||||||||    
T  23954899 gaaatgacg-ggggtgagaatatggaaaaaaacagttatgaaaatcgagcttcatcttcgagctccaagtttaatggtgttgttagagtgcttgaatgtt 23954801  T
Q  363 gatgtcc 369  Q
    | |||||    
T  23954800 ggtgtcc 23954794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 363
Target Start/End: Original strand, 30109024 - 30109185
Alignment:
Q  202 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 301  Q
    |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || |||||||| |||||||| | |||||   || ||||||||  || |||    
T  30109024 attgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatctaaaatgatgggaggtggtcatatgggcaaaaagaactat 30109123  T
Q  302 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 363  Q
     |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  30109124 caaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 30109185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 78 - 369
Target Start/End: Original strand, 46994970 - 46995261
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||    
T  46994970 tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaa 46995069  T
Q  178 agcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 276  Q
    | || |||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||    
T  46995070 aactccaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtgggg 46995169  T
Q  277 tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||  || ||  | || |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  46995170 tgggaatatggaaataa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 46995261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 36756681 - 36756398
Alignment:
Q  62 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 161  Q
    ||||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36756681 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36756582  T
Q  162 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36756581 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36756482  T
Q  261 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36756481 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36756398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 36762478 - 36762195
Alignment:
Q  62 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 161  Q
    ||||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36762478 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36762379  T
Q  162 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36762378 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36762279  T
Q  261 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36762278 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36762195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 19712085 - 19712014
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaa 134  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19712085 tttcttccccaaatatataaaattggaaccctaattttacaatctgtaatctacactccaaaatttccaaaa 19712014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 36766205 - 36766074
Alignment:
Q  62 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 161  Q
    ||||||||| ||| | |||||||||| |||||||||| |||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36766205 ctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36766106  T
Q  162 cttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||| ||||||||||||||    
T  36766105 cttccccaattcaaaaaacttcaaaccctaat 36766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 40785330 - 40785216
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||| |||||||||| |||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   |||||||||||||||||||    
T  40785330 tataaaattgtaaccctaattgtacaatctgcaatctacactccaaaatcaccaaaatttcctccactaataagtggtccagttcttccccaattcaaaa 40785231  T
Q  178 agcttcaaaccctaa 192  Q
    | |||||||||||||    
T  40785230 atcttcaaaccctaa 40785216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 46810995 - 46811129
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||| | ||| | |||||||||||||| ||||||  ||| | || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  46810995 gctctttctttcccaattgtataaaattggaactctaattacacagtctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 46811094  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||||||||||||||    
T  46811095 gttcttccccaattcaaaaaacttcaaaccctaat 46811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 7403590 - 7403476
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||| | ||||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||  |||| ||||||| || |||||  ||  |||    
T  7403590 gctctttctttcccaaatctattaaattggaaccctagttttacaatatgtaatctagagtccaaaatctccaagatttcttccattaattgatgacaac 7403491  T
Q  159 gttcttccccaattc 173  Q
    ||||||| |||||||    
T  7403490 gttcttctccaattc 7403476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 8421712 - 8421840
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||| |||||||||||| ||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  8421712 tcttccccaattatataaaattgaaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 8421811  T
Q  165 ccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||| ||| ||||||||||    
T  8421812 ccccaattcaaaaaacttaaaaccctaat 8421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 13036309 - 13036191
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| |||||| ||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| || |||||  ||  || |    
T  13036309 ctctttcttccccaaatatataaatttggaatccttattttataatttgtcacctagagttcaaaatccccaaaatttcttccattaattgatgacaaag 13036210  T
Q  160 ttcttccccaattcaaaaa 178  Q
    |||||||||||||||||||    
T  13036209 ttcttccccaattcaaaaa 13036191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 45361062 - 45360929
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||| ||||  ||  ||     
T  45361062 gctctttcttccccaaatat-taaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacaagaattgatgtcaat 45360964  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  45360963 gttcttccccaattcaaaaaacttaaaaccctaat 45360929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 19712175 - 19712098
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaat 85  Q
    |||||||| || ||| |||||  |||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  19712175 agtgaccataacttcaaaggactaaattaattgatttgttgaaaatgttttgccctttcttccccaaatatataaaat 19712098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 35342722 - 35342850
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||| ||   ||||||    
T  35342722 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtagtccagttctt 35342821  T
Q  165 ccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||| ||| ||||||||||    
T  35342822 ccccaattcaaaaaacttaaaaccctaat 35342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 37791965 - 37792097
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| || |||||||||| |   || |  ||| || ||    
T  37791965 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccaaaaatttcttccctgaacttatggcaaagt 37792064  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||| ||| ||||||||||    
T  37792065 tcttccccaattcaaaaaacttaaaaccctaat 37792097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 194
Target Start/End: Original strand, 23904917 - 23905052
Alignment:
Q  60 ctctttcttcctc-aaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||||||||| | ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  23904917 ctctttcttcccccaaatatataaatttggaaccctaatgttataatttgtcaactagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 23905016  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaata 194  Q
    |||||||||||||||||||| ||| |||||||||||    
T  23905017 gttcttccccaattcaaaaaacttaaaaccctaata 23905052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 6605162 - 6605032
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |||     
T  6605162 tttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatgttt 6605063  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| ||| ||||||||||    
T  6605062 ttccccaattcaaaaaacttaaaaccctaat 6605032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 13169435 - 13169302
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||| ||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  13169435 gctctttcttccccaaatatataaatttgga-ccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 13169337  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  13169336 gttcttccccaattcaaaaaacttaaaaccctaat 13169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 39857999 - 39858133
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  39857999 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 39858098  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  39858099 gttcttcaccaattcaaaaaacttaaaaccctaat 39858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 47384608 - 47384738
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||| |||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||| |||| ||  ||||  ||  || ||||    
T  47384608 tttcttccccaattatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatgtcttccatgaattgatgtcaaagttc 47384707  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| ||| ||||||||||    
T  47384708 ttccccaattcaaaaaacttaaaaccctaat 47384738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 48705499 - 48705396
Alignment:
Q  202 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 301  Q
    |||||||||||||  || |||| ||| ||||||||||||||||| ||||||| ||||||| ||||||||  ||||||||  || ||||||||  ||||||    
T  48705499 attgaatccgaaaaccagaatctccataatttcttcaagcaaaactgttcaaattgaatccgaaatgat--ggggtgggcatatgggcaaaaagaattat 48705402  T
Q  302 gaaagt 307  Q
     |||||    
T  48705401 caaagt 48705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 40785164 - 40785079
Alignment:
Q  264 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 349  Q
    |||||||| ||||||||  || ||  |||| |||||||||||||| |||||  |||| |||||||| |||||||||||||||||||    
T  40785164 aaatgatggggggtgggaatatggaaaaaaacaattatgaaagtcgagcttcttcttcaagctccaagtttaatggtgatgtgaga 40785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 48850929 - 48851001
Alignment:
Q  121 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| || |||||  ||  || |||||||||||||||||||| ||| ||||||||||    
T  48850929 caaaattcccaaaatttcttccattaattgatgccaaagttcttccccaattcaaaaaacttaaaaccctaat 48851001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 12904101 - 12904046
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatcta 115  Q
    ||||||||||  ||||| ||||||||| |||||||||||||||||| |||||||||    
T  12904101 ctctttcttctccaaatctataaaatttgaaccctaattttacaatctgtaatcta 12904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 48311543 - 48311427
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||||||||||   |||||||| |||||||| ||| ||| | ||| | | |||||| | |||||||||||||| |||||  ||  || |    
T  48311543 ctctttcttccccaaatatatat--ttggaaccttaattttataatttgtcacctagaattcaaaatcctcaaaatttctttcattaattgatgacaaag 48311446  T
Q  160 ttcttccccaattcaaaaa 178  Q
    |||||||||||||||||||    
T  48311445 ttcttccccaattcaaaaa 48311427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 3921007 - 3921096
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 149  Q
    |||||||||||| | ||| |||||||||| |||| ||||| |||||| ||||||||| | | |||||| ||||||||||||| || |||||    
T  3921007 gctctttcttccccgaatctataaaattgaaacc-taattctacaatctgtaatctatagtacaaaatccccaaaatttcttccattaatt 3921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Complemental strand, 12904026 - 12903939
Alignment:
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgtt 250  Q
    ||||||||||| |||| | ||||||||||||        |||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  12904026 ttccccaattctaaaaacgtcaaaccctaatttgtttttattgaacccgaaatccaaagtctccaaaatttcttcaagcaaaattgtt 12903939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 38549845 - 38549975
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    ||||||||  ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |   || ||||    
T  38549845 tttcttccctaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgataccaaagttc 38549944  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| ||| ||| ||||||    
T  38549945 ttccccaattcaaaaaacttaaaatcctaat 38549975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 22155626 - 22155495
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22155626 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22155528  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaa 192  Q
    ||||||||||||||||||| ||| |||||||||    
T  22155527 ttcttccccaattcaaaaaacttaaaaccctaa 22155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 22211541 - 22211410
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22211541 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22211443  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaa 192  Q
    ||||||||||||||||||| ||| |||||||||    
T  22211442 ttcttccccaattcaaaaaacttaaaaccctaa 22211410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 38472573 - 38472705
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    ||||| |||| |||||||||||| |||||||| |||| ||| ||| ||| | ||| | | |||||| |||  |||||||| ||  ||||  ||  || ||    
T  38472573 tctttattccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccgaatttcttccatgaattgatgtcaatgt 38472672  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||| ||| ||||||||||    
T  38472673 tcttccccaattcaaaaaacttaaaaccctaat 38472705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 34775362 - 34775493
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  34775362 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttacatgaattgatgtcaatg 34775461  T
Q  160 ttcttccccaattcaaaaagcttcaaacccta 191  Q
    ||||||||||||||| ||| ||| ||||||||    
T  34775462 ttcttccccaattcagaaaacttaaaacccta 34775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 8421867 - 8421921
Alignment:
Q  226 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 280  Q
    ||||||||||| ||||||||   || || ||||||||||||||||||||||||||    
T  8421867 caaaatttcttgaagcaaaacgcttgaaattgaatctgaaatgatgaggggtggg 8421921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34784243 - 34784289
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg 54  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  34784243 agtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatg 34784289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 27956988 - 27956933
Alignment:
Q  71 tcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatt 127  Q
    ||||||||||||| ||||||| ||||||  ||||| || ||||||||||||||||||    
T  27956988 tcaaatatataaa-ttggaactctaattacacaatctgcaatctacactccaaaatt 27956933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 48227743 - 48227707
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaa 96  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  48227743 ctctttcttccccaaatatataaatttggaaccctaa 48227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 59 - 367
Target Start/End: Original strand, 26448037 - 26448342
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||||  || |||||||||| |||||||||||||||||    
T  26448037 gctctttcatcctcaaatatataaaattggaaccttaattttacaatattttatctatactccaaaa-ccctaaaatttcttccaataattagtggtaac 26448135  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    || ||| | ||||||||||| ||||||||||||||        ||||||||  |||  || |||  ||||||||||||||||||||| ||||||| ||||    
T  26448136 gtcctttctcaattcaaaaaacttcaaaccctaat-tttttttattgaatctaaaaaccagaatacccaaaatttcttcaagcaaaactgttcaaattga 26448234  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 358  Q
    |||||||||||||| |||||||  || ||||| ||  | |||| |||||||||||| | ||| ||||||||| ||||||||||||||||||||| |||||    
T  26448235 atctgaaatgatga-gggtgggcatatgggcacaaagagttatcaaagtcaagcttcaccttcaagctccatctttaatggtgatgtgagagtgtttgaa 26448333  T
Q  359 tgttgatgt 367  Q
    |||||||||    
T  26448334 tgttgatgt 26448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 61 - 281
Target Start/End: Original strand, 30501391 - 30501610
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30501391 tctttcttcctccaatatataaaattggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 30501490  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
     ||||||||||||||||| |  |||||||| ||        ||||||||||||| ||| | || | ||||||||||||||||||| ||||||| ||||||    
T  30501491 acttccccaattcaaaaaaccccaaaccct-atttttttttattgaatccgaaaatcagattccctaaaatttcttcaagcaaaactgttcaaattgaat 30501589  T
Q  261 ctgaaatgatgaggggtgggt 281  Q
    |||||||||||  ||||||||    
T  30501590 ctgaaatgatggtgggtgggt 30501610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 40963184 - 40962981
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40963184 tttcttccccaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttcttacaataattagtggtaacgttc 40963085  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    ||||||||||||||||  |||||||||||||        ||||||||||||   || ||||  |||||||||||||||||||||||||||| ||||||||    
T  40963084 ttccccaattcaaaaaaattcaaaccctaat-tttttttattgaatccgaataccagaatccacaaaatttcttcaagcaaaattgttcaaattgaatct 40962986  T
Q  263 gaaat 267  Q
    |||||    
T  40962985 gaaat 40962981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 61 - 369
Target Start/End: Complemental strand, 1847462 - 1847154
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||||| | ||||||  | ||||   ||    
T  1847462 tctttcttccccaaatgtataaaattggaaccctaattacacaatttgtaatctacacttcaaaatcaccaaaatttcatccaataaaaaatggttcagt 1847363  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    |||||||||||| ||||| || |||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || |  ||||||    
T  1847362 tcttccccaatttaaaaaactacaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgatattgaat 1847263  T
Q  261 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 360  Q
    ||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||    
T  1847262 ctgaaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgagagagcttgaatg 1847163  T
Q  361 ttgatgtcc 369  Q
    ||| |||||    
T  1847162 ttggtgtcc 1847154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 41945898 - 41945600
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  41945898 tttcttccccaaatatataaaattggaaccctaattttacgatgtgtaatctacactccaaaatctctaaattttcttccaataattaagggtcacgttc 41945799  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||| ||||||        |||||||| ||||  |||||||  ||||| || ||||||||||| |||| || ||||||||    
T  41945798 ttccccaaatcaaaaaattgcaaatcctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaa-ttattcaagcaaaactgttgaaattgaatct 41945701  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  41945700 aaaatgaaggggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 41945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 61 - 357
Target Start/End: Original strand, 32842721 - 32843017
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  32842721 tctttcttcctcaaatctataaaattggaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 32842820  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    ||||||  | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  32842821 tcttccttacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 32842920  T
Q  261 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 357  Q
      ||||||||| | |||||| ||| |||||| |  | || | |||||| ||||| ||||| || ||  ||||||||||||||||| ||| |||||||    
T  32842921 gcgaaatgatgggtggtgggcgtatgggcaacacaagttctcaaagtcgagcttcatcttcaaactttatgtttaatggtgatgtcagaatgcttga 32843017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 67 - 293
Target Start/End: Original strand, 49494787 - 49495011
Alignment:
Q  67 ttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttcc 166  Q
    |||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  49494787 ttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttcttcc 49494886  T
Q  167 ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaa 265  Q
    |||||||||| | | ||||||||||||        ||||||||||||||   |||||| | |||||| |||||| ||||| ||||  | |||||||||||    
T  49494887 ccaattcaaataacctcaaaccctaat--tttttgattgaatccgaaataaaaaaatcccgaaaattccttcaaacaaaactgttataattgaatctgaa 49494984  T
Q  266 atgatgaggggtgggtgtaagggcaaaa 293  Q
    |||||| |||||||||||| ||||||||    
T  49494985 atgatg-ggggtgggtgtatgggcaaaa 49495011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 59 - 360
Target Start/End: Complemental strand, 48635173 - 48634872
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| |  ||| ||||||| |||||  | ||||| || | |||| || | ||||       
T  48635173 gctctttcttccccaattgtataacattggaaccctaattacacaatctacaatttacactctaaaatcactaaaatatcctccaattataaatggtcca 48635074  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  48635073 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagtcaaaatcctcaaaatttcttaaagcaaaactattgaaattga 48634974  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 358  Q
    ||||||||||||| ||||||||  || ||  |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  48634973 atctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 48634874  T
Q  359 tg 360  Q
    ||    
T  48634873 tg 48634872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 348
Target Start/End: Original strand, 24382004 - 24382293
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||| ||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| |||| |||| |||| |       
T  24382004 gctctttcttccccaattgtataaagttgtaaccctaattacacaatcttcaatctacactccaaaatcaccaaaatttccttcagtaataagtgatcca 24382103  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||| ||||| ||||||||||||||        |||||||| |||| ||||||||  ||| |||| || |||||||| | || || ||||    
T  24382104 gttcttccccaattaaaaaatcttcaaaccctaattttttcgcattgaatctgaaagtcaaaatcctcaagattttttgaagcaaaactattgaaattga 24382203  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgag 348  Q
    ||||||||||||| ||||||||  || ||  |||| |  ||||||||||  | ||| ||||| |||||||| || |||||||||||||||    
T  24382204 atctgaaatgatggggggtgggaatatggaaaaaaactgttatgaaagtttaacttcatcttgaagctccaagtataatggtgatgtgag 24382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 37865676 - 37865791
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||  ||||||||  ||| ||||||    
T  37865676 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttctaataattaagggtcacgttc 37865775  T
Q  163 ttccccaattcaaaaa 178  Q
    |||||||| |||||||    
T  37865776 ttccccaaatcaaaaa 37865791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 78 - 340
Target Start/End: Original strand, 31885827 - 31886088
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||||||| ||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||||||   |||||||||||||| ||||    
T  31885827 tataaaattggaactctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtggttcagttcttccccaattgaaaa 31885926  T
Q  178 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 277  Q
    | ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||| | | || || |||||||| |||||| | |||||    
T  31885927 aacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattgaatctaaaatgacg-ggggt 31886025  T
Q  278 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggt 340  Q
    |||  || ||| |||| || ||||||||||| ||||| ||||| ||| |||| ||||||||||    
T  31886026 gggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagatccaagtttaatggt 31886088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 2975749 - 2975883
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||||||||||||||||||||  |||||  ||||| |  | |||||||||||||||  |||||||||||| ||||||| || |||       
T  2975749 gctctttcttccccaaatatataaaattggaactttaattacacaatcttcattctacactccaaaatcaccaaaatttcttccaataataagcggtcca 2975848  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||||||||||||||    
T  2975849 gttcttccccaattcaaaaaacttcaaaccctaat 2975883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 33051253 - 33051144
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||| |||||| ||||| |||||||| ||||| ||||||||||||| ||||||  |||| ||||||||||||||||| |||    
T  33051253 tttcttccccaaatgtataaaataggaaccataattatacaatatttaatccacactccaaaatttccaaaaaatcttccaataattagtggtaacattc 33051154  T
Q  163 ttccccaatt 172  Q
    ||||||||||    
T  33051153 ttccccaatt 33051144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 369
Target Start/End: Original strand, 33112233 - 33112441
Alignment:
Q  161 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    |||||||||||||||||| |||||||||||||         |||||||  |||  ||||||||   |||||||||| |||||||| | || || ||| ||    
T  33112233 tcttccccaattcaaaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatccttaaaatttcttgaagcaaaactattgaaattggat 33112331  T
Q  261 ctgaaatgatgagggg-tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 359  Q
    ||||||||||| |||| ||||  || ||| |||| || ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||    
T  33112332 ctgaaatgatgggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgagagtgcttgaat 33112431  T
Q  360 gttgatgtcc 369  Q
    |||| |||||    
T  33112432 gttggtgtcc 33112441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 235 - 363
Target Start/End: Original strand, 37886239 - 37886367
Alignment:
Q  235 ttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgttt 334  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||    
T  37886239 ttcaagcaaaactgttgaaattgaatctaaaatgatgaggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgttt 37886338  T
Q  335 aatggtgatgtgagagtgcttgaatgttg 363  Q
    |||||||||||||||||||||||||||||    
T  37886339 aatggtgatgtgagagtgcttgaatgttg 37886367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 363
Target Start/End: Complemental strand, 23775353 - 23775149
Alignment:
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    ||||||||||| |||||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  23775353 gttcttccccacttcaaaaaacttcaaaccctaattttttcgtatttaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 23775254  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 358  Q
    ||||||||||||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||  ||||| | ||| ||||||| ||||||||||||||||    
T  23775253 atctgaaatgatgggggatgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcgagctctaagttcaatggtgttgtgagagtgcttgaa 23775154  T
Q  359 tgttg 363  Q
    |||||    
T  23775153 tgttg 23775149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 369
Target Start/End: Original strand, 35861831 - 35862141
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatt-tctttcaataattagtggtaa 157  Q
    |||||||||||| ||||| |||||||||| |||||||||| || ||| ||||||||| | |||||||| ||||||| | |||| |  |||||  ||  ||    
T  35861831 gctctttcttccccaaatctataaaattgaaaccctaattataaaatttgtaatctatagtccaaaatccccaaaaatatcttcctttaattgatgacaa 35861930  T
Q  158 cgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaa-atcaccaaaatttcttcaagcaaaattgttcaattt 256  Q
    | |||||||||| || ||||| |||| || |||| |        ||||||||||||||||||| ||| |||||||| |||||||      ||||||  ||    
T  35861931 cattcttccccatttaaaaaa-cttctaaacctatt-tttttttattgaatccgaaattcaaagatccccaaaattccttcaagttttggtgttcaggtt 35862028  T
Q  257 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 356  Q
    ||||||||||||||| | |||||  ||| |||||||| ||||||| |||||  |  || ||||| |||||| |||||||||||||||||||||||| |||    
T  35862029 gaatctgaaatgatgggtggtggacgtatgggcaaaaacaattatcaaagttgattttcatcttcaagctctatgtttaatggtgatgtgagagtgtttg 35862128  T
Q  357 aatgttgatgtcc 369  Q
    | ||||| |||||    
T  35862129 agtgttggtgtcc 35862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 369
Target Start/End: Original strand, 45897487 - 45897640
Alignment:
Q  217 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaag-caattatgaaagtcaagcttt 315  Q
    |||||||  ||||||||||| |||||||| | || || |||||| |||||||||| ||||||||  || ||| ||||  |  |||| ||||||||||||     
T  45897487 caaaatcctcaaaatttcttgaagcaaaactattgaaattgaatatgaaatgatgtggggtgggaatatgggaaaaaaacggttataaaagtcaagcttc 45897586  T
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  45897587 atcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 45897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 369
Target Start/End: Original strand, 2975887 - 2976024
Alignment:
Q  231 tttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccat 330  Q
    |||||| |||||||| | || || |||||||||||||||| |||||||||  || ||| |||| || |||| |||||| ||||| ||||| ||| ||||     
T  2975887 tttcttgaagcaaaactattgaaattgaatctgaaatgataaggggtgggaatatgggaaaaa-cagttatcaaagtcgagcttcatcttcaagttccaa 2975985  T
Q  331 gtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  2975986 gtttaatggtgatgtgagattgcttgaatgttgttgtcc 2976024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 344
Target Start/End: Original strand, 18429030 - 18429314
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | |||||||||| ||||||||||  ||||| || |||||| | || |||||  || ||||||| |  |||||| ||||||       
T  18429030 gctctgtcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctatattctaaaatcacctaaatttcctctaataataagtggtcca 18429129  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||| |||||| |||        |||||||| |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  18429130 gttcttccccaattcaaaaaacttgaaacccgaatttttttgtattgaatctgaaagtcaaaatctacaaaatttcttgaagcaaaactattgaaattga 18429229  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    || ||||||||   |||||| |  |||||| ||||    ||||||||||| ||||| ||||| |||||||| |||||| |||||||    
T  18429230 atttgaaatga-acggggtgagaataagggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatg 18429314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 344
Target Start/End: Original strand, 45255773 - 45256058
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | ||||||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45255773 gctctgtcttccccaattgtataaaatttgaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 45255872  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| || ||||| | || || ||||    
T  45255873 gttcttccccaattcaaaaaacttgaaaccctaat-ttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaaacaaaactattgaaattga 45255971  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagca--attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    ||||||||||| | |||||| |  || ||| ||||  |   ||||||||||| ||||| || || |||||||| ||||||||||||||    
T  45255972 atctgaaatgaag-ggggtgagaatatgggaaaaaaaattgttatgaaagtcgagcttcattttcaagctccaagtttaatggtgatg 45256058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 344
Target Start/End: Original strand, 33851291 - 33851555
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    ||||||||||||||| |||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  33851291 tataaaattggaacc-taattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaa 33851389  T
Q  178 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 277  Q
    |  || ||||||||||        |||||||| ||||  |||||||  ||||||||||| ||| |||| | || || ||||||||||||||| | |||||    
T  33851390 aatttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagaaaaactattgaaattgaatctgaaatgaaggggggt 33851489  T
Q  278 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
     ||  |  ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  33851490 -ggaatctgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 33851555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 2378709 - 2378576
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  2378709 ctctttcttccccaaatatataaatttggaaccctaatattataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 2378610  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||| |||||||||| ||| ||||||||||    
T  2378609 ttcttccctaattcaaaaaacttaaaaccctaat 2378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 42282268 - 42282135
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  42282268 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgtcacatagaattcaaaatccccaaaatttcttccatgaattgatgccaaag 42282169  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  42282168 ttcttccccaattcaaaaaacttaaaaccctaat 42282135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 285
Target Start/End: Complemental strand, 10380719 - 10380511
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    ||||| |||| ||||||||||  ||||| |||||| ||||||  |||||  ||||||| || | |||| || | ||||   |||||||||||||||||||    
T  10380719 tataacattgaaaccctaattacacaatctgtaatttacactttaaaatctccaaaatatcctccaattataaatggtccagttcttccccaattcaaaa 10380620  T
Q  178 agcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 276  Q
    | ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||||||| |||| ||| ||||    
T  10380619 atcttcaaaccctaatttttttcatattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctaaaatcatgggggg 10380520  T
Q  277 tgggtgtaa 285  Q
    |||||||||    
T  10380519 tgggtgtaa 10380511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 610984 - 610850
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||  |||||||| |||| ||| ||| ||| | | | | | || ||| ||||||||||||||||  ||||  ||  ||     
T  610984 gctctttcttccccaaatatataattttggaaccttaatgttataatttgtcaccaagagttcacaatccccaaaatttctttcatgaattgatgccaaa 610885  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  610884 gttcttccccaattcaaaaaacttaaaaccctaat 610850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 51686143 - 51686013
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||| ||  ||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  51686143 tttcttccccaaatatataaatttctaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgccaaagttc 51686044  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| ||| ||||||||||    
T  51686043 ttccccaattcaaaaaacttaaaaccctaat 51686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 17516741 - 17516608
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||| ||| ||||| ||| | | |||||| | | ||||||||| ||  ||||  ||  || |    
T  17516741 ctctttcttccccaaatatataaatttggaactctaatgttataatttgtaacctagagttcaaaatcctccaaatttcttccatgaattgatgtcaatg 17516642  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||| |||||||||| ||| ||||||||||    
T  17516641 ttcttccctaattcaaaaaacttaaaaccctaat 17516608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 21350390 - 21350257
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | |  ||||| ||| ||||||||| ||  ||||  ||  || |    
T  21350390 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagtttaaaatcccccaaatttcttccatgaattgatgtcaatg 21350291  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    | ||||||||||||||||| ||| ||||||||||    
T  21350290 tacttccccaattcaaaaaacttaaaaccctaat 21350257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 30598658 - 30598791
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||| || |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  30598658 ctctttctaccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 30598757  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  30598758 ttcttccccaattcaaaaaacttaaaaccctaat 30598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 44268301 - 44268432
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||| ||  ||     
T  44268301 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattaatgtcaat 44268400  T
Q  159 gttcttccccaattcaaaaagcttcaaacccta 191  Q
    |||||| ||||||||||||| ||| ||||||||    
T  44268401 gttctttcccaattcaaaaaactt-aaacccta 44268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 13466655 - 13466609
Alignment:
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  13466655 atcttgaagctctatgtttaatggtgatgtgagagtacttgaatgtt 13466609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 23887489 - 23887622
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||||||| || |||||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  23887489 gctctttcttcc-caattgtataaaattgaaatcctaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttga 23887587  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||| ||||||||||||||  |||||||||||||    
T  23887588 gttctgccccaattcaaaaaatttcaaaccctaat 23887622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 27897512 - 27897646
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||  ||||||||| ||  ||||  ||  ||     
T  27897512 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatccctcaaatttcttacatgaattgatgtcaat 27897611  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||| ||||| ||| ||||| ||||    
T  27897612 gttcttccccaattaaaaaaacttaaaaccataat 27897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 23875963 - 23876095
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||||||  |||| || |||||||||||||| ||||||  || ||| || || | | |||||||| ||||||||||| || |||||  ||  ||      
T  23875963 ctctttcttcccaaaatctacaaaattggaacccttattttatcatttgtcat-tagagttcaaaattctcaaaatttcttccattaattgatgacaatc 23876061  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||||||| ||||||    
T  23876062 ttcttccccaattcaaaaaacttcaaaacctaat 23876095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 45897342 - 45897467
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||| | ||||||||| |||||||||||  |||||||| ||||||||||| | |||    |||||||| | ||||||| |||| |   |    
T  45897342 ctctttcttccccaattgtataaaattagaaccctaattacacaatatgcaatctacactctataatcatgaaaatttcctccaataataagtgcttcag 45897441  T
Q  160 ttcttccccaattcaaaaagcttcaa 185  Q
    |||| | |||||||||||| ||||||    
T  45897442 ttctgctccaattcaaaaaacttcaa 45897467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 23291889 - 23292023
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||   ||||||||||| ||||||||||||| ||| |||  || ||||| | | ||||||  || ||||||||| ||  |||||  |  ||     
T  23291889 gctctttcttctataaatatataaatttggaaccctaatgttataattcgtcatctagagttcaaaatctcccaaatttcttccatgaattaacgtcaat 23291988  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||  ||| ||||||||||    
T  23291989 gttcttccccaattcaaaagacttaaaaccctaat 23292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30501321 - 30501367
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg 54  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  30501321 agtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatg 30501367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 22218719 - 22218772
Alignment:
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||| ||| || |||| |||||||||||||||||| ||||||||||| |||||    
T  22218719 atcttcaagttctatgtctaatggtgatgtgagagtacttgaatgttggtgtcc 22218772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 11021825 - 11022125
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  11021825 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 11021924  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11021925 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11022024  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11022025 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 11022124  T
Q  363 g 363  Q
    |    
T  11022125 g 11022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 28247974 - 28247674
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  28247974 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 28247875  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  28247874 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 28247775  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  28247774 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 28247675  T
Q  363 g 363  Q
    |    
T  28247674 g 28247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 363485 - 363354
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  363485 tttcttccccaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacgttc 363386  T
Q  163 ttccccaattca-aaaagcttcaaaccctaat 193  Q
    ||| |||||||| |||| ||||||||||||||    
T  363385 ttctccaattcaaaaaaacttcaaaccctaat 363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 352
Target Start/End: Original strand, 11313127 - 11313402
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||||||||||| |||||||||||||||||| | |||| ||||||||||||| |||| ||||             |||||||||||||    
T  11313127 tttcttccccaaatatataaaattagaaccctaattttacaatctttaatgtacactccaaaatccccacaatt-------------agtggtaacgttc 11313213  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||||| ||||| || |||||||| ||        |||||||||||||   | |||  ||||||||||||||||||||| ||||||| ||||||      
T  11313214 ttccccaattaaaaaaactccaaaccctcatttttttttattgaatccgaaaactagaattcccaaaatttcttcaagcaaaactgttcaaattgaatag 11313313  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtg 352  Q
     || ||||| ||||||||  || ||||||||  | | || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11313314 aaactgatg-ggggtgggcatatgggcaaaaagagtcatcaaagtcaagctttatcttcaagctccatgtttaatggtgatgtgagagtg 11313402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 38149836 - 38149535
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||| |||||| |||||||||  ||| |||||     
T  38149836 tttctttcccaaatatataaaattggaaccctaattttacaatgtgtaatctacactctaaaatctccaaattttcttccaataattaagggtcacgtta 38149737  T
Q  163 ttccccaattcaaaaagcttcaaaccct-aatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 261  Q
    |||||||| |||||||  | |||| ||| | |        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  38149736 ttccccaaatcaaaaaattgcaaatcctgatttttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 38149637  T
Q  262 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 361  Q
    | |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||| ||||| |||||    
T  38149636 taaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagaatgcttaaatgt 38149537  T
Q  362 tg 363  Q
    ||    
T  38149536 tg 38149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 7745062 - 7744932
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||| | ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  7745062 tttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttc 7744963  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||| ||| | | ||||||||||||    
T  7744962 ttccccaattgaaataacctcaaaccctaat 7744932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 61 - 368
Target Start/End: Original strand, 10715400 - 10715690
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| | |||||||| ||  ||||||||||||||| ||| | ||||||||  |||||||    
T  10715400 tcttttttccccaaatatataaaattggaaccctaattttacaatctttaatctaccctaaaaaattcccaaaattccttccgataattagcagtaacgt 10715499  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    | || ||||||||||||| ||||||||||||||        ||||||||| |||   | |||| ||||||||||||||||||||| ||||||| ||||||    
T  10715500 tgtt-cccaattcaaaaaacttcaaaccctaat--ttttttattgaatccaaaaactagaatccccaaaatttcttcaagcaaaactgttcaaattgaat 10715596  T
Q  261 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 360  Q
      |||||||||  |||||||  || || |||||  | |||| ||||||             |||||||||||||||||||| ||||||||||||||||||    
T  10715597 tcgaaatgatg-cgggtgggcatatggacaaaaagagttatcaaagtc-------------aagctccatgtttaatggtgctgtgagagtgcttgaatg 10715682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 17948734 - 17948601
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||| | ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||| |||||||||    
T  17948734 ctctttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattggtggtaacg 17948635  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||| ||| | | ||||||||||||    
T  17948634 ttcttccccaattgaaataacctcaaaccctaat 17948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 363
Target Start/End: Complemental strand, 37418569 - 37418263
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||       
T  37418569 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtcca 37418470  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    ||||||| |||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  |||| |||||| |||||||| | || || |||    
T  37418469 gttcttcgccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaagtttcttgaagcaaaactattgaaattg 37418370  T
Q  258 aatctgaaatgatgaggggtgggtgtaagg-gcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 356  Q
    |||||||||||||| ||||||||  || ||   |||| || ||||||||||| || || |||||  |||| || ||||||||||| ||||||||||||||    
T  37418369 aatctgaaatgatggggggtgggaatatggaaaaaaaacagttatgaaagtcgagtttcatcttcgagcttcaagtttaatggtgttgtgagagtgcttg 37418270  T
Q  357 aatgttg 363  Q
    |||||||    
T  37418269 aatgttg 37418263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 369
Target Start/End: Original strand, 35575 - 35881
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||| | ||||||||| ||||| |||||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   ||||    
T  35575 tttcttccccaattgtataaaattcgaaccttaattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcagttc 35674  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 261  Q
    | |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||||||    
T  35675 tgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatc 35774  T
Q  262 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 361  Q
    |||||||||| || |||||  || ||  |||| |  |||||||||| ||| || ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  35775 tgaaatgatgtggagtgggaatatggaaaaaa-cggttatgaaagttaagtttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgt 35873  T
Q  362 tgatgtcc 369  Q
    || |||||    
T  35874 tggtgtcc 35881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 2359394 - 2359516
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| ||| ||||| | ||||||| ||||||||||||| ||| |||||  ||  |||||||    
T  2359394 tttcttccccaaatctataaaattgaaaccctaattttacaatttgtcatctagagtccaaaa-tcccaaaatttctatcattaattgatgacaacgttc 2359492  T
Q  163 ttccccaattcaaaaagcttcaaa 186  Q
    ||||||||||| |||| |||||||    
T  2359493 ttccccaattctaaaaacttcaaa 2359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 363
Target Start/End: Complemental strand, 42880610 - 42880309
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||| | ||||| |||| ||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||   |    
T  42880610 ctctttcttccccaattgtataacattgaaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtccag 42880511  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 259  Q
    ||||||||||||| ||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || |||||    
T  42880510 ttcttccccaatttaaaaaacttcaaaccctaattttttcgtattaaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 42880411  T
Q  260 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 359  Q
    || ||||| ||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||| ||||| | |||||||||||   || ||||||||||||    
T  42880410 tcagaaatcatgggggttgggaatatgggaaaaaacagttatgaaagtcgagcttcatctttgagctctaagtttaatggtg--ttgcgagtgcttgaat 42880313  T
Q  360 gttg 363  Q
    ||||    
T  42880312 gttg 42880309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 34400628 - 34400762
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  34400628 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 34400727  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34400728 gttcttccccaattcaaaaaacttaaaaccctaat 34400762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 42517877 - 42518011
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| || |||||| ||  ||||  ||  ||     
T  42517877 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaattttcttccatgaattgatgtcaat 42517976  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  42517977 gttcttccccaattcaaaaaacttaaaaccctaat 42518011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 15373683 - 15373554
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggta-acgttct 163  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||  | |||||    
T  15373683 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccaagttct 15373584  T
Q  164 tccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||| ||| ||||||||||    
T  15373583 tccccaattcaaaaaacttaaaaccctaat 15373554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 40150664 - 40150825
Alignment:
Q  160 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaag-caaaattgttcaatttga 258  Q
    ||||||||| |||| |||| |||||||||||| |        ||||||||| |||| |||||||  ||||||||||||||  ||||||||||||  ||||    
T  40150664 ttcttcccctattctaaaaacttcaaaccctattttgttttcattgaatccaaaatccaaaatcttcaaaatttcttcaaatcaaaattgttcagattga 40150763  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctt 320  Q
    |||| |||||||| | |||||  ||| |||||||| ||||| | ||||||||| || |||||    
T  40150764 atctaaaatgatgggtggtggccgtatgggcaaaaacaattctcaaagtcaagtttcatctt 40150825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 271
Target Start/End: Complemental strand, 40152346 - 40152135
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||| | ||||| |||||||||| ||||| |||||| |||| | | ||||||  ||||||||  ||| |||||||| || ||||||     |||    
T  40152346 gctctttctttcccaaatctataaaattgaaacccaaatttttcaatctctcatctacggtccaaaatctccacaatttcttccattaattaac---aac 40152250  T
Q  159 g--ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 256  Q
       |||||||||||||| |||| ||| ||||||||||        |||||||||||||| |||||||   ||||||||||||| ||||||||||||  ||    
T  40152249 catttcttccccaattctaaaaacttaaaaccctaatttgatttgattgaatccgaaatccaaaatcctgaaaatttcttcaaccaaaattgttcagatt 40152150  T
Q  257 gaatctgaaatgatg 271  Q
    |||||  ||||||||    
T  40152149 gaatccaaaatgatg 40152135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 17697903 - 17697776
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||| ||| |||| |  |||    |    
T  17697903 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttc-ttccataaatgatgg----g 17697809  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaa 192  Q
    ||||||||||||||||||| ||| |||||||||    
T  17697808 ttcttccccaattcaaaaaacttaaaaccctaa 17697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 19907036 - 19907170
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  19907036 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 19907135  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  19907136 gttcttcaccaattcaaaaaacttaaaaccctaat 19907170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 42003108 - 42002990
Alignment:
Q  226 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 325  Q
    ||||||||||| |||||||| | || || |  |||||||||||||  ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| ||||    
T  42003108 caaaatttcttgaagcaaaactattgaaataaaatctgaaatgatagggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagc 42003009  T
Q  326 tccatgtttaatggtgatg 344  Q
    |||| ||||||||||||||    
T  42003008 tccaagtttaatggtgatg 42002990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 41708225 - 41708097
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | | ||||| ||||||   ||||||    
T  41708225 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctcccataataagtggtccagttctt 41708126  T
Q  165 ccccaattcaaaaagcttcaaaccctaat 193  Q
    || ||||||||||| ||| ||||||||||    
T  41708125 cctcaattcaaaaaacttaaaaccctaat 41708097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 26581316 - 26581430
Alignment:
Q  79 ataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaa 178  Q
    |||| ||| ||| |||||||||| ||| ||| | ||| | | |||||||||||||||||||| || |||||  ||  |||| | ||||||||||||||||    
T  26581316 ataagattagaatcctaattttataatttgtcacctagagttcaaaattcccaaaatttcttccattaattgatgacaacgctgttccccaattcaaaaa 26581415  T
Q  179 gcttcaaaccctaat 193  Q
     ||||||| ||||||    
T  26581416 acttcaaaacctaat 26581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 16377082 - 16377163
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||||| | |||||| | | |||||||||    
T  16377082 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctacagttcaaaatcctctaaatttctt 16377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 4047758 - 4047703
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatcta 115  Q
    ||||||||||| ||||| |||||||||| ||||||||||||| ||| ||| |||||    
T  4047758 ctctttcttccccaaatctataaaattgaaaccctaattttataatttgtcatcta 4047703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 363547 - 363509
Alignment:
Q  36 aattgatttgtagaaaatgctttgctctttcttcctcaa 74  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  363547 aattgatttgcagaaaatgttttgctctttcttcctcaa 363509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 161854 - 161813
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaatttta 101  Q
    ||||||||||| |||||||| ||| |||||||||||||||||    
T  161854 ctctttcttccccaaatataaaaatttggaaccctaatttta 161813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 2359587 - 2359542
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaat 105  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  2359587 ctctttcttccccaaatctattaaattggaaccctaatttgacaat 2359542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 14387765 - 14387837
Alignment:
Q  121 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||| ||||||||||||| ||||||||  ||  ||  ||||||||||||||||||| |||  |||||||||    
T  14387765 caaaatccccaaaatttcttccaataattgatgtcaattttcttccccaattcaaaaaacttagaaccctaat 14387837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 31474847 - 31474719
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||  | | |||||| | ||| ||||||| ||  ||||||||  || | ||||    
T  31474847 tcttccccaaatatataaatttggaaccctaatattataatttgtgaccttgagttcaaaatcctcaagatttcttccatgaattagtgacaaagatctt 31474748  T
Q  165 ccccaattcaaaaagcttcaaaccctaat 193  Q
     ||||||||||||| | | ||||||||||    
T  31474747 tcccaattcaaaaaacctaaaaccctaat 31474719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 5784666 - 5784366
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5784666 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5784567  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5784566 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 5784467  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5784466 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5784367  T
Q  363 g 363  Q
    |    
T  5784366 g 5784366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 60 - 369
Target Start/End: Original strand, 42558248 - 42558546
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||          |  |||||| ||||| || |||||| ||   |||    
T  42558248 ctctttcttccccaaatctagaaaattggaaccctaattttacaatctgtcatcta----------tctccaaaaattcttccattaattaatgacgacg 42558337  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 259  Q
    ||||| |||||||| |||| ||||||||||||||        ||||||||| |||| |||||||  ||||||||||||||||| |||||||||  |||||    
T  42558338 ttctttcccaattctaaaaacttcaaaccctaat-tcttttgattgaatccaaaatccaaaatccgcaaaatttcttcaagcataattgttcagattgaa 42558436  T
Q  260 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 359  Q
    |||||||||||| | |||||| ||| |||||||| || |||| ||| |  ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  42558437 tctgaaatgatgggtggtgggcgtatgggcaaaatcagttatcaaatttgagcttcatcttcaagctccatgtttaatggtgatgtgagagtgcttgaat 42558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 63 - 293
Target Start/End: Complemental strand, 51123342 - 51123115
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||||||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  51123342 tttcttcctcaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagaggtaacgttc 51123243  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||||| ||| | | ||||||||||||        ||||||||||||    |||||| |||||||| ||||||  |||| ||||  | ||||||||    
T  51123242 ttccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaatcaaaaaatccccaaaattccttcaaataaaactgttgtaattgaatct 51123145  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaa 293  Q
    ||||||||| |||||||||||| ||||||||    
T  51123144 gaaatgatg-ggggtgggtgtatgggcaaaa 51123115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 11152837 - 11153136
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  11152837 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 11152936  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||   ||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11152937 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaactaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11153036  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||| ||| ||||| |  ||||||||||||||||||||||||| ||||||| ||||    
T  11153037 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaaacttcatcttcatcctccatgtttaatggtgatgtgagaatgcttgagtgtt 11153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 25172818 - 25172701
Alignment:
Q  76 tatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaa 175  Q
    ||||||||||| |||||||||||||||||| | |||| ||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  25172818 tatataaaattagaaccctaattttacaatctttaatgtacgctccaaaatctccaaaatttcttccaataattagtggtaacgttcttccccaatttaa 25172719  T
Q  176 aaagcttcaaaccctaat 193  Q
    |||  |||||||||||||    
T  25172718 aaaaattcaaaccctaat 25172701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 369
Target Start/End: Complemental strand, 31803500 - 31803190
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||||||||||||  |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  31803500 gctctttcttccccaattgtataaaattggaacgttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 31803401  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  31803400 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 31803301  T
Q  258 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 357  Q
    |||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| |||||||| ||||||| ||| |||||||||||||||    
T  31803300 aatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagctccaagtttaatagtgttgtgagagtgcttga 31803202  T
Q  358 atgttgatgtcc 369  Q
    |||||| |||||    
T  31803201 atgttggtgtcc 31803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 369
Target Start/End: Original strand, 46637056 - 46637365
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  46637056 gctctttcttccccaatt-tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 46637154  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  46637155 gttctaccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 46637254  T
Q  258 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 357  Q
    ||||| |||||||| ||||||||  || ||  |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  46637255 aatctaaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 46637353  T
Q  358 atgttgatgtcc 369  Q
    |||||| |||||    
T  46637354 atgttggtgtcc 46637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 59 - 344
Target Start/End: Original strand, 45379374 - 45379658
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | ||||||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45379374 gctctgtcttccccaattgtataaaattagaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcta 45379473  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||| ||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  45379474 gttcttccccaattcagaaaacttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 45379573  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| |||||||||||||| |||||| |||||||    
T  45379574 atctgaaatgaag-ggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatctttaagctccaagtttaacggtgatg 45379658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 65 - 344
Target Start/End: Complemental strand, 44159088 - 44158807
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||| | |||||||||| |||||| |||  ||||| || |||||||| || |||||  || ||||||| | ||||||| |||||| | ||||||    
T  44159088 tcttccccaattgtataaaattgaaaccctgattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcaagttctt 44158989  T
Q  165 ccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||    
T  44158988 ccccaattcaaaaaacttgaaaccctaattttttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattgaatct 44158889  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    ||||||| | ||||||||  || ||| ||||  | ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  44158888 gaaatgaaggggggtgggattatgggaaaaaatagttatgaaagtcgagcttcatcttcaagcttcaagtttaatggtgatg 44158807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 344
Target Start/End: Complemental strand, 42136045 - 42135761
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | ||||||||||||| |||||||  ||||| || |||||||| || |||||  || ||||||  | ||||||| |||| |       
T  42136045 gctctatcttccccaattgtataaaattggaatcctaattacacaatctgcaatctacattctaaaatcacctaaattttctccaataataagtgctcca 42135946  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||| ||||| ||||        |||||||| |||| |||||||   ||||||||||| |||||||| | || || ||||    
T  42135945 gttcttccccaattcaaaaaacttgaaacc-taattttttcgtattgaatctgaaagtcaaaattcacaaaatttcttgaagcaaaactattgaaattga 42135847  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  42135846 atctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 42135761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 6576906 - 6576774
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  6576906 gctctttcttccccaattgtataaaattggaaccctaattaaacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 6576807  T
Q  159 gttcttccccaattcaaaaagcttcaaacccta 191  Q
    ||| || ||||||||||||| ||||||||||||    
T  6576806 gttttttcccaattcaaaaaacttcaaacccta 6576774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 369
Target Start/End: Original strand, 18183063 - 18183205
Alignment:
Q  226 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 325  Q
    ||||||||||| |||||||| | || || ||| ||||||||||||| ||||||||   | ||| |||| || ||||||||||| || || ||||| ||||    
T  18183063 caaaatttcttgaagcaaaactattgaaattggatctgaaatgatg-ggggtgggaacatgggaaaaaacagttatgaaagtcgagtttcatcttcaagc 18183161  T
Q  326 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    |||| |||||||||||||||||||  |||||||||||| |||||    
T  18183162 tccaagtttaatggtgatgtgagaaagcttgaatgttggtgtcc 18183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 344
Target Start/End: Original strand, 35478378 - 35478660
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||||||| | | |||||||| ||||||||||  ||||| |   |||||||||| |||||  || ||||||| | ||||||| ||||||       
T  35478378 gctctttcttcctcaattgtttaaaattgaaaccctaattacacaatct---atctacactctaaaatcacctaaatttcctccaataataagtggttta 35478474  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    ||| |||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  |    
T  35478475 gtttttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaacttcttgaagcaaaactattgaaataaa 35478574  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |||  |||||||| ||||||||  || ||| ||||    ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  35478575 atccaaaatgatggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttgaagcttcaagtttaatggtgatg 35478660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 50554500 - 50554634
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| ||| |||||| ||| ||||||||| ||  ||||  ||  ||     
T  50554500 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagacttcaaaatcccccaaatttcttacatgaattgatgtcaat 50554599  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  50554600 gttcttccccaattcaaaaaacttaaaaccctaat 50554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 33679549 - 33679680
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||||||| | || ||||||||||||||||||  ||||| || ||| ||||||| |||||  || ||||||| | ||||||| | | ||       
T  33679549 gctctttcttcctcaattgtacaaaattggaaccctaattacacaatctgcaatatacactctaaaatcacctaaatttcctccaataataactagtcca 33679648  T
Q  159 gttcttccccaattcaaaaagcttcaaaccct 190  Q
    |||||||||||||||||||| |||||||||||    
T  33679649 gttcttccccaattcaaaaaacttcaaaccct 33679680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 31237139 - 31237273
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||  ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||  ||  ||     
T  31237139 gctctttcttccccaaatatataattttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccattaattgatgtcaat 31237238  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  31237239 gttcttccccaattcaaaaaacttaaaaccctaat 31237273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 18058121 - 18058254
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||| ||| ||||| | | |||||| | ||||| |||||  | |||||  ||  |||     
T  18058121 ctctttcttccccaaatttataaaattggaaccttaattttacaatttgtcatctagagttcaaaatcctcaaaacttcttcaattaattgatgacaaca 18058220  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||| |||| ||||||| ||||||    
T  18058221 ttcttccccaattctaaaaacttcaaaacctaat 18058254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 15106116 - 15105986
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||| |||||| |||||| ||| |||  || | ||||| | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  15106116 tttcttccccaaatatataaatttggaatcctaatgttataattcgtcacctacagttcaaaatccccaaaatttcttacatgaattgatgccaaagttc 15106017  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| ||| ||||||||||    
T  15106016 ttccccaattcaaaaaacttaaaaccctaat 15105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 6817200 - 6817333
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| || |||||||||| ||| ||| ||| | ||| | | ||||||||| |||||||||| ||  ||||  ||  || |    
T  6817200 ctctttcttccccaaatatataaatttagaaccctaatgttataatttgttacctagagttcaaaattcctaaaatttcttccatgaattgatgtcaatg 6817299  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||  ||| ||||||||||    
T  6817300 ttcttccccaattcaaaagacttaaaaccctaat 6817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 18180818 - 18180900
Alignment:
Q  110 aatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 192  Q
    |||||||||||||||||  |||||||||| | || |||| ||||||    ||||||||||||||||||| |||||||||||||    
T  18180818 aatctacactccaaaatcaccaaaatttcctccagtaataagtggtccgattcttccccaattcaaaaaacttcaaaccctaa 18180900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 45045232 - 45045365
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| | | |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  45045232 ctctttcttccccaaatatataaatttggaaccctaatgttataatttatcacatagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 45045331  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  45045332 ttcttccccaattcaaaaaacttaaaaccctaat 45045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 27952282 - 27952167
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||| ||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  27952282 tataaaattgtaaccctaattacacaatttttaatctacattctaatatcacttaaatttcctccaataataagtggtccagttcttccccaattcaaaa 27952183  T
Q  178 agcttcaaaccctaat 193  Q
    | ||| ||||||||||    
T  27952182 aacttaaaaccctaat 27952167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 2870845 - 2870712
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||| | ||||||||| || ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  2870845 gctctttctttcccaaatatatcaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 2870746  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  2870745 gttcttccccaattcaaaaa-cttaaaaccctaat 2870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 3012175 - 3012309
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||  ||| ||| | ||| | | ||||||   | ||||||||| ||  ||||  ||  ||     
T  3012175 gctctttcttccccaaatatataaatttggaaccctaatgttctaatttgtcacctatagttcaaaatctaccaaatttcttccatgaattgatgtcaat 3012274  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  3012275 gttcttccccaattcaaaaaacttaaaaccctaat 3012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 33679696 - 33679814
Alignment:
Q  226 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 325  Q
    ||||||||||| |||||||| | || || |  |||| ||||||||| ||||||||  ||  || |||| |  ||||||||||| ||||| ||||| ||||    
T  33679696 caaaatttcttgaagcaaaactattgaaataaaatccgaaatgatggggggtgggaatataggaaaaaactgttatgaaagtcgagcttcatcttcaagc 33679795  T
Q  326 tccatgtttaatggtgatg 344  Q
    |||| ||||||||||||||    
T  33679796 tccaagtttaatggtgatg 33679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 33599542 - 33599580
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaatttta 101  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  33599542 tttcttccacaaatatataaatttggaaccctaatttta 33599580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 7e-65; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 11031643 - 11031828
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaaccctaattttacaatat 107  Q
    |||||||||||||||||||||  ||||| ||||||||| | |||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||| |    
T  11031643 agtgaccaaaatttccaaggactaaatttattgatttgcataaaatgttttgctttttcttccccaaatatataaaattggaagcctaattttacaatct 11031742  T
Q  108 gtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 193  Q
     |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11031743 ataatctacactccaaaatccccaaaatttcttccaataattagtggtaacgttcttccctaattcaaaaaacttcaaaccctaat 11031828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 40019448 - 40019748
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||| |||||| |||||||||  ||| ||||||    
T  40019448 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacaccccaaaatctccaaattttcttccaataattaagggtcacgttc 40019547  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  40019548 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 40019647  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  40019648 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 40019747  T
Q  363 g 363  Q
    |    
T  40019748 g 40019748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 60 - 271
Target Start/End: Original strand, 25356622 - 25356834
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  25356622 ctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaatcaccaaaatttcttccaataataagtggtaacg 25356721  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    ||||||||||||||||||| ||||||||||||| |        |||||||| ||||| ||||||| |||||||||||| |||||||| | || || ||||    
T  25356722 ttcttccccaattcaaaaaacttcaaaccctaatttcttttttattgaatctgaaatccaaaatccccaaaatttcttgaagcaaaactattgaaattga 25356821  T
Q  259 atctgaaatgatg 271  Q
    ||| |||||||||    
T  25356822 atcagaaatgatg 25356834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 369
Target Start/End: Original strand, 33369050 - 33369362
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||| || |||||||||||||||||  |||||| ||||| ||||||| ||||||       
T  33369050 gctctttcttccccaaatatataaaattggaaccctaattacataatctgcaatctacactccaaaatcaccaaaacttcttccaataataagtggtcca 33369149  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 256  Q
    |||||||||||||||||||| |||||||||| ||  |        |||||||| ||||  ||||||  |||||| ||||| |||||||| | || || ||    
T  33369150 gttcttccccaattcaaaaaacttcaaacccgaattttttttcttattgaatctgaaagccaaaattcccaaaacttcttgaagcaaaactattgaaatt 33369249  T
Q  257 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 356  Q
    ||||||||||||||| |  |||||  || | | |||| |  ||||||||||  ||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  33369250 gaatctgaaatgatgggacgtgggaatatgagaaaaaacggttatgaaagttgagctttatcttcaagctccaaatttaatggtgatgtgagagcgcttg 33369349  T
Q  357 aatgttgatgtcc 369  Q
    ||||||| |||||    
T  33369350 aatgttggtgtcc 33369362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 72 - 363
Target Start/End: Original strand, 28432520 - 28432810
Alignment:
Q  72 caaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 171  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||||||||||     
T  28432520 caaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttcttccccaaa 28432619  T
Q  172 tcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatg 271  Q
    |||||||  | |||||| || |        |||||||| ||||  |||||||  |||||||  ||||||||||  |||| || |||||||| ||||||||    
T  28432620 tcaaaaaattgcaaaccgtatttttttttaattgaatctgaaaaccaaaatctacaaaattcattcaagcaaatctgttgaaattgaatctaaaatgatg 28432719  T
Q  272 aggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 363  Q
     |||||||   || ||||||||  |  ||  ||||||||| || ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  28432720 -ggggtggtcatatgggcaaaaagagctaccaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 28432810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 60 - 369
Target Start/End: Complemental strand, 9876361 - 9876053
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||| | |||||||||| |||||||||| |||||| || ||||||||||| | |||  | |||||||| | ||||||| ||||||   |    
T  9876361 ctctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctataatcacaaaaatttcctccaataataagtggtccag 9876262  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 259  Q
    |||| |||||||||||||| ||||||||||||||        | |||||| ||||  |||||||  |||||||| || |||||||| | || || |||||    
T  9876261 ttctgccccaattcaaaaaacttcaaaccctaattttttcgtagtgaatctgaaagccaaaatcctcaaaattttttgaagcaaaactattgaaattgaa 9876162  T
Q  260 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 359  Q
    |||||||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| | |||||| ||||||||||  ||||||| |||||||||    
T  9876161 tctgaaatgatg-ggggtgggaatatgggaaaaaactgttatgaaagtcaagcttcatcttcaggctccaagtttaatggtattgtgagaatgcttgaat 9876063  T
Q  360 gttgatgtcc 369  Q
    |||| |||||    
T  9876062 gttggtgtcc 9876053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 10269336 - 10269206
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||| | ||||||||||||||||||| |||||||||||||| |  ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  10269336 tttctttcccaaatatataaaattggaagcctaattttacaatctacaatctacacaccaaaatccccaaaatttcttccaataattagtggtaacgttc 10269237  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| |||||||| |||||    
T  10269236 ttccccaattcaaaaaacttcaaacgctaat 10269206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 59 - 349
Target Start/End: Original strand, 461467 - 461756
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||||||| | |||||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | |  |||| ||||||       
T  461467 gctctttcttcctcaattgtataaaattgtaaccctaattacacaatctccaatctacactccaaaatcaccaaaatttcctcctgtaataagtggtcca 461566  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||||||| || || ||||| | || || ||||    
T  461567 gttcttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaattt-ttgaaacaaaactattgaaattga 461665  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 349  Q
    ||||||||||||| || |||||  || ||| | || || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  461666 atctgaaatgatggggtgtgggaatatgggaagaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 461756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 63 - 349
Target Start/End: Original strand, 33158951 - 33159236
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  33158951 tttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactccaaaatcaccaaaatttcctccagtaataagtggttcggttc 33159050  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||| ||| || |||||||| | || || ||||||||    
T  33159051 ttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaatttttttgaagcaaaactattgaaattgaatct 33159150  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 349  Q
    ||||||||  ||||||||  | | || ||||||| ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||    
T  33159151 gaaatgatagggggtgggaat-atggaaaaagcagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgaga 33159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 9186432 - 9186302
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||  ||||||||| |||||||||||| ||||||||    
T  9186432 tttcttccccaaatatttaaaattgaaaccctaattttacaatctgtaatctacactccaaaatcccataaatttcttccaataattagtgataacgttc 9186333  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    || ||||||||||||| ||| ||||||||||    
T  9186332 ttacccaattcaaaaaactttaaaccctaat 9186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 60 - 358
Target Start/End: Original strand, 38881691 - 38881992
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||||||||||||||||||||| |||||  |||||||| ||| ||||||||||||   || ||||||||| ||||||| ||||||   |    
T  38881691 ctctttcttccccaaatatataaaattggaaccttaattacacaatatgcaatgtacactccaaaaccacccaaatttcttccaataataagtggtccag 38881790  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 259  Q
    ||||||||||||||||||| ||| ||||||||||          | | ||  |||  |||||||  ||||||||||| |||||||| | || || |||||    
T  38881791 ttcttccccaattcaaaaaacttgaaaccctaattttttttttcttattctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 38881890  T
Q  260 tctgaaatgatgagg-ggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg--tgagagtgcttg 356  Q
    |||||||||||| || |||| |  || ||| |||| |||||||||||||| ||||| ||||| |||||||| |||||| |||||||  ||||||||||||    
T  38881891 tctgaaatgatggggaggtgagaatatgggaaaaaacaattatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatgtatgagagtgcttg 38881990  T
Q  357 aa 358  Q
    ||    
T  38881991 aa 38881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 10268093 - 10268223
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||| ||||||||| ||||||||||| ||||| |||    
T  10268093 tttcttccccaaatatatagaattggaaccctaatttttcaatctataatctacactccaaaatcccccaaatttcttccaataattagtagtaacattc 10268192  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||  ||| | ||||||||||||||    
T  10268193 ttccccaatgtaaataacttcaaaccctaat 10268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 63 - 293
Target Start/End: Complemental strand, 44620472 - 44620244
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||| ||||| |||||||||||||||| ||||    
T  44620472 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcacaaaaattcttccaataattagtggtaatgttc 44620373  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 261  Q
    || ||||||| ||| | | ||||||||||||        ||||||| | ||||   |||||| |||||||| |||||| ||||| ||||  | |||||||    
T  44620372 tt-cccaattgaaataacctcaaaccctaat-ttttttgattgaattcaaaataaaaaaatctccaaaattccttcaaacaaaactgttgtaattgaatc 44620275  T
Q  262 tgaaatgatgaggggtgggtgtaagggcaaaa 293  Q
    |||||||||| ||||||||||||  |||||||    
T  44620274 tgaaatgatg-ggggtgggtgtatcggcaaaa 44620244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 344
Target Start/End: Complemental strand, 1322115 - 1321829
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  1322115 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggttca 1322016  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    |||||||||||||||||||| ||| ||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  1322015 gttcttccccaattcaaaaaacttgaaaccctaatttttttcgtattgaatatgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattg 1321916  T
Q  258 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  1321915 aatctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 1321829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 10770636 - 10770768
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||  ||||||||||| |||||||||||||| | |||||| ||  |||    
T  10770636 gctctttcttccccaaatctataaaattggagccctaattttacaatctgtaatccgcactccaaaatccccaaaatttctttaattaattaatgacaac 10770735  T
Q  159 gttcttccccaattcaaaaagcttcaaacccta 191  Q
    ||| |||| |||||| |||| ||||||||||||    
T  10770736 gtttttcctcaattctaaaaacttcaaacccta 10770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 25373440 - 25373335
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25373440 ctctttcttcctcaaatatatgaaattggaaccctgattgtgctatatgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25373341  T
Q  160 ttcttc 165  Q
    ||||||    
T  25373340 ttcttc 25373335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 25705571 - 25705652
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||    
T  25705571 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaatcaccaaaatttctt 25705652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 314
Target Start/End: Original strand, 42895061 - 42895317
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| |||| |||| || | ||||       
T  42895061 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcttccaattataaatggtcca 42895160  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    |||||||||||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  42895161 gttcttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 42895260  T
Q  258 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctt 314  Q
    |||||||||||||| ||||||||  || ||| |||| || | ||||||||| |||||    
T  42895261 aatctgaaatgatggggggtgggaatatgggaaaaaacagtcatgaaagtcgagctt 42895317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 15684048 - 15684178
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||| | | ||||||||| |||||||||| || |||||  ||  |||||||    
T  15684048 tttcttccccaaatctataaaattggaaccccaattttacaatctgtaatctagagttcaaaattccaaaaatttcttccattaattgatgacaacgttc 15684147  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||| ||||  |||||| ||||||    
T  15684148 ttccccaattctaaaaatttcaaaacctaat 15684178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 25402610 - 25402504
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25402610 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25402511  T
Q  160 ttcttcc 166  Q
    |||||||    
T  25402510 ttcttcc 25402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 25707119 - 25707013
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25707119 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25707020  T
Q  160 ttcttcc 166  Q
    |||||||    
T  25707019 ttcttcc 25707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 12515395 - 12515499
Alignment:
Q  88 gaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaac 187  Q
    ||||| |||||||||||| | |||||||||||||||||| ||||||||||| |||  ||||||| | |||||||||||||| ||||||||| ||||||||    
T  12515395 gaaccgtaattttacaatctttaatctacactccaaaatccccaaaatttc-ttccctaattagcgataacgttcttccccgattcaaaaaacttcaaac 12515493  T
Q  188 cctaat 193  Q
    ||||||    
T  12515494 cctaat 12515499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 11719746 - 11719865
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||| | | | ||| | |||||||| ||||||||||||| || |||||  ||  |||    
T  11719746 gctctttcttccccaaatctataaaattggaaccccaattttacaatttatcacctagagtccaaaatccccaaaatttcttccattaattgatgacaac 11719845  T
Q  159 gttcttccccaattcaaaaa 178  Q
    ||||||||||||||||||||    
T  11719846 gttcttccccaattcaaaaa 11719865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 25370798 - 25370865
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 126  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25370798 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaat 25370865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 369
Target Start/End: Original strand, 33748793 - 33748935
Alignment:
Q  226 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 325  Q
    ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| ||||    
T  33748793 caaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagc 33748891  T
Q  326 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||    
T  33748892 tccaagtttaatagtgttgtgagagtgcttgaatgttggtgtcc 33748935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 17807313 - 17807446
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||| ||| | ||| | | |||||| ||||||| ||||| || |||||  ||  |||     
T  17807313 ctctttcttccacaaatatataaatttggaaccctaattttataatttgtcacctagagttcaaaatccccaaaaattcttccattaattgatgacaaca 17807412  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||||||| ||||||    
T  17807413 ttcttccccaattcaaaaaacttcaaaacctaat 17807446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 369
Target Start/End: Complemental strand, 31823276 - 31822975
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||| |  |||||||||||||       
T  31823276 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttcctcaaataattagtggttca 31823177  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 256  Q
    ||||| |||||||||||||| |||||||||||||  |        | ||||||  |||  |||||||  ||||||||||| |||||||| | || || ||    
T  31823176 gttctgccccaattcaaaaaacttcaaaccctaattttttttcgtagtgaatctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaa-tt 31823078  T
Q  257 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 356  Q
    ||||||||||||||| ||||||||  || ||| |||| |  ||||||||          ||||| || ||||| ||||||||||| ||||||||||||||    
T  31823077 gaatctgaaatgatgtggggtgggaatatgggaaaaaacggttatgaaa----------atcttcaaactccaagtttaatggtgttgtgagagtgcttg 31822988  T
Q  357 aatgttgatgtcc 369  Q
    ||||||| |||||    
T  31822987 aatgttggtgtcc 31822975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 11790627 - 11790496
Alignment:
Q  62 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 161  Q
    ||||||||||||||| ||||||| ||||||| | |||||||||| ||| ||||| | |||||||| ||||||||||||| || |||||  ||  ||| ||    
T  11790627 ctttcttcctcaaatctataaaaatggaaccttgattttacaatttgttatctatagtccaaaatccccaaaatttcttccattaattgatgacaacctt 11790528  T
Q  162 cttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||| ||||| |||| ||||||| ||||||    
T  11790527 cttcccaaattctaaaaacttcaaaacctaat 11790496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 32824072 - 32823938
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | | |||||||||||||||||||  ||||| || ||||||||||  |||||  || ||||||| | ||||||| ||||||       
T  32824072 gctctttcttccccaattgtttaaaattggaaccctaattacacaatctgcaatctacactataaaatcgcctaaatttcctccaataataagtggttca 32823973  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||| |||||||||||||||| ||||||||||||||    
T  32823972 gtttttccccaattcaaaaaacttcaaaccctaat 32823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 25371781 - 25371636
Alignment:
Q  202 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 301  Q
    |||||||| ||||| |||||||   ||||||| ||  ||||||| | || || ||||||| ||||||||||||||||||  || ||| |||| || ||||    
T  25371781 attgaatctgaaatccaaaatccaaaaaatttattgcagcaaaactattgaaattgaatccgaaatgatgaggggtgggcatatgggaaaaaacagttat 25371682  T
Q  302 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtga 347  Q
    ||| ||| ||||| ||||| |||||||| |||||||||||||||||    
T  25371681 gaatgtcgagcttcatcttcaagctccaagtttaatggtgatgtga 25371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 9186522 - 9186447
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaa 83  Q
    |||||||||||||||||| ||  ||||| ||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  9186522 agtgaccaaaatttccaatgactaaattgattgatttgcagaaaatgacttgctctttcttccccaaatatataaa 9186447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 24527184 - 24527303
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  24527184 gctctatcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 24527283  T
Q  159 gttcttccccaattcaaaaa 178  Q
    ||||||||||||||||||||    
T  24527284 gttcttccccaattcaaaaa 24527303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 37525149 - 37525267
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||||| |||| ||| | |||||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | || |||| ||||||       
T  37525149 gctctttattccccaattgtataaaattgtaaccctaattgcacaatcttcaatctacactccaaaatcaccaaaatttcctccactaataagtggttca 37525248  T
Q  159 gttcttccccaattcaaaa 177  Q
    |||||||||||||||||||    
T  37525249 gttcttccccaattcaaaa 37525267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 41041032 - 41041166
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  41041032 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 41041131  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||| | ||| ||||||||||    
T  41041132 gttcttccccaattcaaataacttaaaaccctaat 41041166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 13484831 - 13484964
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  13484831 ctctttcttccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 13484930  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  13484931 ttcttccccaattcaaaaaacttaaaaccctaat 13484964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 37525333 - 37525418
Alignment:
Q  264 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 349  Q
    |||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  37525333 aaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 37525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 8655752 - 8655640
Alignment:
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  8655752 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 8655653  T
Q  259 atctgaaatgatg 271  Q
    |||||||||||||    
T  8655652 atctgaaatgatg 8655640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 41824261 - 41824394
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||| | ||| ||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  41824261 ctctttcttccccaaatatatatatttgaaaccctaatgttataatttgtcacgtagagttcaaaatccccaaaatttcttccatgaattgatgtcaaag 41824360  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  41824361 ttcttccccaattcaaaaaacttaaaaccctaat 41824394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 31199781 - 31199909
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  31199781 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 31199880  T
Q  165 ccccaattcaaaaagcttcaaaccctaat 193  Q
    || |||||||| || ||| ||||||||||    
T  31199881 cctcaattcaacaaacttaaaaccctaat 31199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 33748644 - 33748759
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||    
T  33748644 tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaa 33748743  T
Q  178 agcttcaaaccctaat 193  Q
    |  |||||||||||||    
T  33748744 aaattcaaaccctaat 33748759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 11719994 - 11720047
Alignment:
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||| |||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  11719994 atcttcaagctctatgcttaatggtgatgtgagagtacttgaatgttggtgtcc 11720047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 22273668 - 22273535
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  22273668 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 22273569  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||| || ||| ||| ||||||    
T  22273568 ttcttccccaattcaagaaacttaaaatcctaat 22273535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 29694095 - 29693963
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| | ||| ||||||| ||  ||||  ||  || ||    
T  29694095 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccgcaagatttcttccatgaattgatgacaaagt 29693996  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||| |||||| ||||| ||| ||||||||||    
T  29693995 tcttctccaatttaaaaaacttaaaaccctaat 29693963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 32823863 - 32823816
Alignment:
Q  297 attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  32823863 attatgaaagtcgagctttatcttcaagcttcaagtttaatggtgatg 32823816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 11790370 - 11790317
Alignment:
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||| |||||| || || ||||||||||||||||| ||||||||||| |||||    
T  11790370 atcttcaagctctatcttgaatggtgatgtgagagtacttgaatgttggtgtcc 11790317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 42895321 - 42895353
Alignment:
Q  331 gtttaatggtgatgtgagagtgcttgaatgttg 363  Q
    ||||||||||| |||||||||||||||||||||    
T  42895321 gtttaatggtgttgtgagagtgcttgaatgttg 42895353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 39922806 - 39922506
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39922806 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39922707  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39922706 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39922607  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39922606 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39922507  T
Q  363 g 363  Q
    |    
T  39922506 g 39922506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 39084951 - 39084651
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39084951 tttcttccccaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39084852  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39084851 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39084752  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39084751 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39084652  T
Q  363 g 363  Q
    |    
T  39084651 g 39084651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 39190618 - 39190318
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39190618 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39190519  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  39190518 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 39190419  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39190418 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39190319  T
Q  363 g 363  Q
    |    
T  39190318 g 39190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 42879576 - 42879876
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42879576 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42879675  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42879676 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42879775  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  42879776 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgattgaatgtt 42879875  T
Q  363 g 363  Q
    |    
T  42879876 g 42879876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 43778681 - 43778979
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  43778681 tttcttcgccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 43778780  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  43778781 ttccccaa-tcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 43778878  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  43778879 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 43778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 5485851 - 5485551
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5485851 tttcttccccaaatatataaaattggaaccctaattttaccatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5485752  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5485751 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaaatgttgaaattgaatct 5485652  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | || ||   || ||||||||  |  ||| ||||||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||    
T  5485651 aaaatgatgggaggcggtcatatgggcaaaaagagctatcaaagtcaagcttcgtcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5485552  T
Q  363 g 363  Q
    |    
T  5485551 g 5485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 63 - 362
Target Start/End: Original strand, 44993100 - 44993399
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  44993100 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 44993199  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  44993200 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 44993299  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   || ||||||||  |  ||| ||||||||| || ||||| |  ||||||||||||||||||||||| ||||||||||||||    
T  44993300 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgaaagtgcttgaatgtt 44993399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 13438146 - 13438275
Alignment:
Q  64 ttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 163  Q
    ||||||| |||||||||||||| | ||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  13438146 ttcttccccaaatatataaaatagaaaccctaattttacaatctttaatgtacactccaaaattcccaaaatttcttccaataattagtggtaactttct 13438245  T
Q  164 tccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||| ||||||||||||||    
T  13438246 tccccaattcaaaaaacttcaaaccctaat 13438275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 32653430 - 32653130
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    ||||||||  ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  32653430 tttcttcccaaaatatataaaattgaaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 32653331  T
Q  163 ttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 261  Q
    |||||||| |||||||  | |||||||||| |        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  32653330 ttccccaaatcaaaaaattacaaaccctaatttttttttaattgaatatgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 32653231  T
Q  262 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 361  Q
    | |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  || ||||||||||||||||||||||||||| ||||||    
T  32653230 taaaatgaag-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatccttcatgtttaatggtgatgtgagagtgctcgaatgt 32653132  T
Q  362 tg 363  Q
    ||    
T  32653131 tg 32653130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 74 - 259
Target Start/End: Complemental strand, 25994897 - 25994708
Alignment:
Q  74 aatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattc 173  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||||    
T  25994897 aatatataaaattggaactctaaatttacaatctgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacattcttcctcaattc 25994798  T
Q  174 aaaaagcttcaaaccctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 259  Q
    ||||| || |||||||| |    |        |||||||||||||  || |||| ||||||||||||||||||||| ||||||| |||||    
T  25994797 aaaaaactccaaaccctgatttttttttttttattgaatccgaaaaccagaatccccaaaatttcttcaagcaaaactgttcaaattgaa 25994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 230740 - 230869
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||  ||||||||||||||||| | |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  230740 tttcttctccaaatatataaaattggcatcctaattttacaatctgtaatctacactccaaagtccccaaaatttcttccaataattagtggtaacgttc 230839  T
Q  163 ttccccaattcaaaaagcttcaaaccctaat 193  Q
    || || ||||||||||  |||||||||||||    
T  230840 tt-cctaattcaaaaaatttcaaaccctaat 230869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 369
Target Start/End: Complemental strand, 4520270 - 4519959
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||  ||| |||||||||||||||||||||||  | ||| || ||||||||||| |||||  |||||||||| |   ||||| ||||||       
T  4520270 gctctttcttcgccaattatataaaattggaaccctaattacaaaatttgcaatctacactctaaaatcaccaaaatttcctctgataataagtggttca 4520171  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 256  Q
    ||||||| |||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || ||  |    
T  4520170 gttcttctccaattcaaaaaacttgaaaccctaatttttttttgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaaat 4520071  T
Q  257 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 356  Q
    |||| |||||||||| |||||||   || ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||||||||||||| | ||||||||    
T  4520070 gaatatgaaatgatg-ggggtggaaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtcaaagtgcttg 4519972  T
Q  357 aatgttgatgtcc 369  Q
    ||||||| |||||    
T  4519971 aatgttggtgtcc 4519959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 344
Target Start/End: Original strand, 44556917 - 44557183
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||||||  ||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  44556917 tataaaattggaattctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaa 44557016  T
Q  178 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 277  Q
    | ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  ||||  ||||||||||||||    
T  44557017 aacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaaattcttgaagcaaaactattgaaataaaatccaaaatgatgaggggt 44557116  T
Q  278 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 344  Q
    |||  || ||| |||| |  ||||||||||| ||||| |||||  ||||||| ||||||||||||||    
T  44557117 gggaatatgggaaaaaactgttatgaaagtcgagcttcatcttctagctccaagtttaatggtgatg 44557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 39294625 - 39294553
Alignment:
Q  120 ccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 192  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39294625 ccaaaatccccaaaatttcttccaataattagtggtaacgttcttccccaattcaaaaaacttcaaaccctaa 39294553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 343
Target Start/End: Complemental strand, 27626530 - 27626246
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| |  ||||||||||| |||||     ||||||| | ||||||| ||||||       
T  27626530 gctctttcttccccaattgtataaaattggaaccctaattacacaatctacaatctacactctaaaatcatttaaatttcctccaataataagtggtcca 27626431  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
     ||||||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||||||||| |||||||| | || || |  |    
T  27626430 attcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaatttcttgaagcaaaactattgaaataaa 27626331  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgat 343  Q
    |||  |||||||| ||||||||  || ||  |||| |  ||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  27626330 atccaaaatgatggggggtgggaatatggcaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgat 27626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 349
Target Start/End: Original strand, 51041027 - 51041314
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||| ||||||||  |||  ||||| | |  |||| ||||||   |    
T  51041027 ctctttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacattccaaaatcaccatgatttcctccggtaataagtggttcgg 51041126  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 259  Q
    ||||||||| ||||| ||| |||||||||||||         |||||||| |||| ||||||||  |||||    || |||||||| | || || |||||    
T  51041127 ttcttcccctattcataaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaaaaatttgaagcaaaactattgaaattgaa 51041226  T
Q  260 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 349  Q
    | ||||||||||  |||||||  || ||| |||| || ||||||||||| || || ||||| |||||||| |||||||||||||||||||    
T  51041227 tatgaaatgatg--gggtgggaatatgggaaaaaacagttatgaaagtcgagtttcatcttcaagctccaagtttaatggtgatgtgaga 51041314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 28100865 - 28100977
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||| ||||| |||||||||| ||| |||||| |||||| | ||||||| | |||||||||||||||||||||| || |||||  ||  |||||    
T  28100865 tctttcttccccaaatctataaaattgaaactctaattgtacaatttataatctagagtccaaaattcccaaaatttcttccattaattgatgacaacgt 28100964  T
Q  161 tcttccccaattc 173  Q
    |||||||||||||    
T  28100965 tcttccccaattc 28100977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 13450107 - 13449984
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||  ||||| |||||||||| ||||||||||||||||| | |||| ||||||||||||||         |||| ||||||||| |  |||| |    
T  13450107 tctttcttcaccaaatgtataaaattgaaaccctaattttacaatctttaatgtacactccaaaatt---------tcttccaataattatttttaacat 13450017  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||| ||||||||||||||    
T  13450016 tcttccccaattcaaaaaacttcaaaccctaat 13449984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 2691684 - 2691818
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  |||||||||||| || |||||  ||  ||     
T  2691684 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctccaaaatttcttccattaattgatgacaaa 2691783  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
     ||||||||||||||||||| ||| ||||||||||    
T  2691784 attcttccccaattcaaaaaacttaaaaccctaat 2691818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 20820290 - 20820423
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||| ||| | ||| | |  ||||| ||||||||||||| || |||||  ||  || |    
T  20820290 ctctttctttctcaaatatataaatttggaaccctaattttataatttgtcacctaaagtttaaaatccccaaaatttcttccactaattgatgacaaag 20820389  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||| |||||||||||| ||| ||| ||||||    
T  20820390 ttcttctccaattcaaaaaacttaaaaacctaat 20820423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 337
Target Start/End: Complemental strand, 35997568 - 35997284
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || || ||  || ||||||| | ||||||| ||||||       
T  35997568 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaatataacctaaatttcctccaataataagtggtcca 35997469  T
Q  159 gttc------ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttca 252  Q
    ||||      |||||||||| ||||| ||| |||||||||         |||||||| ||||  |||||||  ||||||||||| |||||||| | || |    
T  35997468 gttccagttcttccccaatttaaaaaacttgaaaccctaaatttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattga 35997369  T
Q  253 atttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaat 337  Q
    | ||||||||||||||||| ||||||||  || ||| |||| |  ||| ||||||| ||||| ||||| ||||| || |||||||    
T  35997368 aattgaatctgaaatgatggggggtgggaatatgggaaaaaactgttaagaaagtcgagcttcatcttcaagctgcaagtttaat 35997284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 39294721 - 39294645
Alignment:
Q  10 tgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaatt 86  Q
    |||||||||||||||| |   ||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  39294721 tgaccaaaatttccaaaggctaaattgattgatttgcagaaaatgcttttctctttcttccccaaatatataaaatt 39294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 47942541 - 47942413
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  47942541 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 47942442  T
Q  165 ccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||| ||| ||||||||||    
T  47942441 ccccaattcaaaaaacttaaaaccctaat 47942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 54387670 - 54387537
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||| ||  ||||||||||| ||||||||||||| ||||||| ||| | ||| | | |||||| | ||||||||||| ||  ||||  ||  || |    
T  54387670 ctctttctgccctaaatatataaatttggaaccctaatgttacaatttgtcacctagagttcaaaatcctcaaaatttcttccatgaattgatgccaaag 54387571  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  54387570 ttcttccccaattcaaaaaacttaaaaccctaat 54387537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 10544605 - 10544498
Alignment:
Q  255 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 354  Q
    |||||| |||||||||| | |||||| ||| |||||||| || || | |||||| | ||| ||||| |||||| ||||||||||||||||| ||| || |    
T  10544605 ttgaatatgaaatgatgggtggtgggcgtatgggcaaaaacagttctcaaagtcgaacttcatcttcaagctctatgtttaatggtgatgtcagaatgtt 10544506  T
Q  355 tgaatgtt 362  Q
    ||||||||    
T  10544505 tgaatgtt 10544498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 44793243 - 44793358
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||||||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  44793243 tataaaattggaaccctaattacacaatctataatctacattctaatatcacataaatttcctccaataataagtggtccagttcttccccaattcaaaa 44793342  T
Q  178 agcttcaaaccctaat 193  Q
    | ||| ||||||||||    
T  44793343 aacttaaaaccctaat 44793358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 11254378 - 11254512
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||| ||||| || |||||  ||  ||     
T  11254378 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaaattcttccattaattgatgtcaat 11254477  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||  ||||||||||    
T  11254478 gttcttccccaattcaaaaaactcaaaaccctaat 11254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 10544778 - 10544693
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatta 150  Q
    |||||| ||||| ||||||||||||||||||||||| ||||   |  |||||| |||||||| ||||||||||||| || ||||||    
T  10544778 tcttccccaaatctataaaattggaaccctaatttttcaatccctcgtctacagtccaaaatccccaaaatttcttccattaatta 10544693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 26397715 - 26397635
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    |||||||||||||||||| ||||||||| ||||||||| |||| ||| ||| ||||| | | |||||| |||||||||||||    
T  26397715 gctctttcttcctcaaatctataaaattagaaccctaa-tttataatttgtcatctagagttcaaaatccccaaaatttctt 26397635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 49524527 - 49524394
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||| |||||||| ||||||||||||| ||| ||| ||| | ||  | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  49524527 ctctttcttccccaagtatataaatttggaaccctaatgttataatttgtcacctggagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 49524428  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  49524427 ttcttccccaattcaaaaaacttaaaaccctaat 49524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 35402069 - 35402202
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | | |||| ||| ||||||||| ||  ||||  ||  ||     
T  35402069 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttc-aaatcccccaaatttcttccatgaattgatgtcaat 35402167  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||| ||||| ||| ||||||||||    
T  35402168 gttcttccccaattaaaaaaacttaaaaccctaat 35402202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 369
Target Start/End: Complemental strand, 27385980 - 27385940
Alignment:
Q  329 atgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  27385980 atgtttaatggtgatgtgagagtacttgaatgttggtgtcc 27385940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 230650 - 230728
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaatt 86  Q
    |||||||| ||||||||||||  || ||   |||||||  |||||||||||||| |||||||| ||| |||||||||||    
T  230650 agtgaccataatttccaaggactaatttggctgatttgctgaaaatgctttgctttttcttccccaattatataaaatt 230728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 369
Target Start/End: Original strand, 28101018 - 28101179
Alignment:
Q  208 tccgaaattcaaaa-tcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaag 306  Q
    |||||||| ||||| || |||||||||||||||||     ||||||  ||||||||||||||||| | |||||   ||  |||||||  | |||| ||||    
T  28101018 tccgaaatccaaaaatctccaaaatttcttcaagctttggtgttcaggttgaatctgaaatgatgggtggtggca-tataggcaaaaatagttatcaaag 28101116  T
Q  307 tcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
     | | ||| ||||| |||||| |||| ||||||||||||||| |||||||||| ||| |||||    
T  28101117 acgatcttcatcttcaagctctatgtataatggtgatgtgagggtgcttgaatattggtgtcc 28101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 42982248 - 42982211
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaat 97  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  42982248 ctctttcttccccaaatatataaatttggaaccctaat 42982211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 20494146 - 20494182
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaa 96  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  20494146 ctctttcttccccaaatatataaatttggaaccctaa 20494182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 17950853 - 17951152
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  17950853 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 17950952  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  17950953 ttccccaaatcaaaaaattacaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 17951051  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| | |||||   |  ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  17951052 aaaatgatgggaggtggtcatttgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 17951151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 35174674 - 35174974
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  35174674 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 35174773  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  35174774 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 35174873  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||| ||| | ||||    || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||| ||||||||| ||||||||    
T  35174874 aaaataatgggaggtgatcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatatgagagtgcctgaatgtt 35174973  T
Q  363 g 363  Q
    |    
T  35174974 g 35174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 357
Target Start/End: Complemental strand, 17936339 - 17936042
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    |||||||||||||||| |||||||||| |||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  17936339 tctttcttcctcaaatctataaaattgaaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 17936240  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 260  Q
    | || || | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  17936239 tattgcctacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 17936140  T
Q  261 ctgaaatgatgaggggtgggtgtaagggc-aaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 357  Q
    | ||||||||| | |||||  ||| |||| |||| || || | |||||| ||||| ||||| ||  |  ||||||||||||||||| ||| |||||||    
T  17936139 ccgaaatgatgggtggtggacgtatgggcaaaaaacagttctcaaagtcgagcttcatcttcaaaatttatgtttaatggtgatgtcagaatgcttga 17936042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 63 - 363
Target Start/End: Complemental strand, 34345123 - 34344824
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  34345123 tttcttcctaaaatatataaaattggaaccctaactttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 34345024  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||| | | |||||  | |||||||||||        |||| ||  ||||  |||||||  |||||||  || |||||||| |||| || ||||||||    
T  34345023 ttccccgaataaaaaaattgcaaaccctaattttttttaattggatatgaaaaccaaaatctgcaaaattcatttaagcaaaagtgttgaaattgaatct 34344924  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||  |||||||   || ||||||||  |  ||| |||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||||||    
T  34344923 aaaatgat-tggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcaacttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 34344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 4289710 - 4289838
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  4289710 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctatactccaaaatctccaaattttcttccaataattaagggtcacgttc 4289809  T
Q  163 ttccccaattcaaaaagcttcaaacccta 191  Q
    |||||||| |||||||  | |||||||||    
T  4289810 ttccccaaatcaaaaaattgcaaacccta 4289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 31210313 - 31210129
Alignment:
Q  12 accaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaa---tatat--------aaaattggaaccctaatttt 100  Q
    |||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||| ||||||    ||| |        || |||| || |||||||||    
T  31210313 accaaaattttcaaggactaaattgattgatttgtagaaaatgctttgctctttctccctcaacggttatttcttccccaaatattgaaaacctaatttt 31210214  T
Q  101 acaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaa 185  Q
    ||||| ||||||||||||||||||||  | ||||| |  | ||||||||||||||||| ||||||||||||||||||| ||||||    
T  31210213 acaatctgtaatctacactccaaaatctcaaaaatattatccaataattagtggtaactttcttccccaattcaaaaaacttcaa 31210129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 33277101 - 33277234
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||||||||| ||||||||||||| |||||||||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |  |||     
T  33277101 gctctttcttc-tcaaatatataaatttggaaccctgattttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatattaaa 33277199  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  33277200 gttcttccccaattcaaaaaacttaaaaccctaat 33277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 7371453 - 7371586
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  7371453 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 7371552  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  7371553 ttcttccccaattcaaaaaacttaaaaccctaat 7371586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 30639903 - 30640027
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    ||||||||||| || | ||||||||||||||| |||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   ||    
T  30639903 tctttcttccttaattgtataaaattggaaccataattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagt 30640002  T
Q  161 tcttccccaattcaaaaagcttcaa 185  Q
    ||||||  |||||||||| ||||||    
T  30640003 tcttccataattcaaaaaacttcaa 30640027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 11356922 - 11356803
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  11356922 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 11356823  T
Q  159 gttcttccccaattcaaaaa 178  Q
    ||||||||||||||||||||    
T  11356822 gttcttccccaattcaaaaa 11356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 33267342 - 33267419
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    |||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||||||||    
T  33267342 tttcttccccaaatatacaaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttctt 33267419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 14337985 - 14338061
Alignment:
Q  73 aaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 149  Q
    ||||||||||| ||||||||||||||||| ||| ||| |  || | | |||||| ||||||||||||| || |||||    
T  14337985 aaatatataaatttggaaccctaattttataatttgtcacatagagttcaaaatccccaaaatttcttccattaatt 14338061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 1344612 - 1344478
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| |||||||| ||||||||    
T  1344612 gctctttcttccctaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttcttccaataattggtggtaac 1344513  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||||||||||||||    
T  1344512 gttcttccccaattcaaaaaacttcaaaccctaat 1344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 42619581 - 42619875
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42619581 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42619680  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42619681 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42619780  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
     |||||||| |||||||   || |||    |||   ||  |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  42619781 aaaatgatggggggtggtcatatggg---gagc---taccaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 42619874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 24497874 - 24497749
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    ||||||||  ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | || ||||||||    
T  24497874 tttcttccctaaatatataaaattgaaactctaattttacaataagtaatctacactccaaaattcccaaaatttcttccaataatcaatgataacgttc 24497775  T
Q  163 ttccccaattcaaaaagcttcaaacc 188  Q
    |||||||||||||||| |||||||||    
T  24497774 ttccccaattcaaaaaccttcaaacc 24497749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 369
Target Start/End: Original strand, 18726853 - 18727164
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| |||||||||||||| | |||    |||||||  | ||||||| ||||||       
T  18726853 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgtaatctacactctataatcatgaaaattttctccaataataagtggttca 18726952  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    ||||| |||||||||||||| ||||||||||||||         | ||||||  |||  |||||||  ||||||||||| |||||| | | || || |||    
T  18726953 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctcaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattg 18727052  T
Q  258 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 357  Q
    |||||||||||||| ||||||||  ||  || |||| |  |||||||||| |||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  18727053 aatctgaaatgatgtggggtgggaatataggaaaaaacggttatgaaagtaaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 18727152  T
Q  358 atgttgatgtcc 369  Q
    |||||| |||||    
T  18727153 atgttggtgtcc 18727164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 361
Target Start/End: Original strand, 38176923 - 38177225
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38176923 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38177022  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38177023 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38177122  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 358  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38177123 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38177222  T
Q  359 tgt 361  Q
    |||    
T  38177223 tgt 38177225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 361
Target Start/End: Original strand, 38204147 - 38204449
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38204147 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38204246  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 258  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38204247 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38204346  T
Q  259 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 358  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38204347 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38204446  T
Q  359 tgt 361  Q
    |||    
T  38204447 tgt 38204449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 369
Target Start/End: Original strand, 35291343 - 35291644
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||||| ||| | |||||||||| |||||| |||  ||||   | |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  35291343 tttcttccccaattgtataaaattgaaaccctgattacacaa---gcaatctacactccaaaatcaccaaaatttcctccagtaataagtggtccggttc 35291439  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 262  Q
    |||||||||||| ||| |||||||||||||         |||||||  |||  ||||||||  ||||||||||| |||||||| | || || ||| ||||    
T  35291440 ttccccaattcacaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatcctcaaaatttcttgaagcaaaactattgaaattggatct 35291538  T
Q  263 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 362  Q
    ||||||||| ||||||||  || ||| |||| || |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  35291539 gaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtcaagtttcatcttcaagctccaagtttaatggtgatgtgatagtgcttgaatgtt 35291637  T
Q  363 gatgtcc 369  Q
    | |||||    
T  35291638 ggtgtcc 35291644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 78 - 369
Target Start/End: Complemental strand, 40330296 - 40330004
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||  | |||||||| | ||||||| ||||||   | ||||||||||||||| |    
T  40330296 tataaaattggaaccctaattacacaatatgcaatctacactccaaaatcacaaaaatttcctccaataataagtggtccagctcttccccaattcaaca 40330197  T
Q  178 agcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 276  Q
    | ||| ||||||||||         |||||||  ||||  |||||||   |||||||||| |||||||| | || || |||| |||||||||||| ||||    
T  40330196 aacttgaaaccctaattttttccgtattgaatatgaaagccaaaatcttgaaaatttcttgaagcaaaactattgaaattgattctgaaatgatgggggg 40330097  T
Q  277 tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    |||   || ||| ||||  | ||||||||||| ||||| ||||| ||  |||| ||||||||||||||||||||||||||||||||| |||||    
T  40330096 tggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcaatttccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 40330004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 369
Target Start/End: Complemental strand, 32089725 - 32089411
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||  | ||||||| || |||       
T  32089725 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttactccaataataagaggttca 32089626  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  32089625 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 32089526  T
Q  258 aat-ctg--aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 354  Q
    ||| ||   |||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  32089525 aatacttcaaaatgatgtggggtgggaatatgggaaaaaacggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgct 32089426  T
Q  355 tgaatgttgatgtcc 369  Q
    ||||||||| |||||    
T  32089425 tgaatgttggtgtcc 32089411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 1343482 - 1343614
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 160  Q
    ||||||||||  |||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  1343482 tctttcttccctaaatatataaaattgacaccctaattttataatctttaaactacactccaaaatctccaaaatttcttccaatagttagtggtaacgt 1343581  T
Q  161 tcttccccaattcaaaaagcttcaaaccctaat 193  Q
    | |||||||||| ||||| || |||||||||||    
T  1343582 ttttccccaatttaaaaaactccaaaccctaat 1343614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 293
Target Start/End: Complemental strand, 27350322 - 27350095
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 162  Q
    |||||| | ||||| |||||||||||||||||||||||| ||| | ||||  |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  27350322 tttctttcccaaatgtataaaattggaaccctaattttataatctttaattcacacgccaaaattcccaaaaattctttcaataattagt-gtaacgttc 27350224  T
Q  163 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 261  Q
     ||||||||| ||| | | |||||||||| |        ||||||||| ||||   |||||| ||||||||||||||| ||||| ||||  | ||||||     
T  27350223 atccccaattgaaataacctcaaaccctatt--ttttttattgaatccaaaataaaaaaatccccaaaatttcttcaaacaaaactgttgtaattgaata 27350126  T
Q  262 tgaaatgatgaggggtgggtgtaagggcaaaa 293  Q
     ||||||||| |||||||||||| ||||||||    
T  27350125 agaaatgatg-ggggtgggtgtatgggcaaaa 27350095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 43317176 - 43317329
Alignment:
Q  216 tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttt 315  Q
    ||||||||  ||||||||||| |||||||| |  | || ||| ||||||||||||| ||||||||  || ||  |||| || ||||||||||| |||||     
T  43317176 tcaaaatcctcaaaatttcttgaagcaaaactagtgaaattggatctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttc 43317275  T
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| |||||    
T  43317276 atcttcaaactccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 43317329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 363
Target Start/End: Original strand, 32836186 - 32836470
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    ||||| |||||||||||||||  ||||| || ||| ||||||  |||||  ||||||| || | |||  || | |||| | |||||||||||||||||||    
T  32836186 tataacattggaaccctaattacacaatctgcaatttacactataaaatcaccaaaatatcctccaaatataaatggtcaagttcttccccaattcaaaa 32836285  T
Q  178 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 277  Q
    | ||||||||||||||        |||||||   |||  |||||||  |||||  | || |||||||| | || || ||||||||||||||||| |||||    
T  32836286 aacttcaaaccctaattttttcgtattgaatttaaaagccaaaatcctcaaaaaattttgaagcaaaactattgaaattgaatctgaaatgatg-ggggt 32836384  T
Q  278 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 363  Q
    |||  || | | |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  32836385 gggaatatgtgaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaatgttg 32836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 293
Target Start/End: Complemental strand, 6116700 - 6116465
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |||| | ||||||||| || ||||| ||||||||||||| || ||||||     |||    
T  6116700 gctctttcttccccaaatctataaaattgaaaccctaatttttcaatctctaatctacagtcaaaaatccccaaaatttcttccattaatta---acaac 6116604  T
Q  159 --gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaat 254  Q
       ||||||||  |||| |||| |||||||||||||  |        |||||||  ||||| ||||||| ||||||||||||||  |||||||||||||     
T  6116603 catttcttccctgattctaaaaacttcaaaccctaatttttgttttgattgaatatgaaatccaaaatccccaaaatttcttcattcaaaattgttcaaa 6116504  T
Q  255 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaa 293  Q
    ||||||| ||||||||| | | ||||||||  |||||||    
T  6116503 ttgaatccgaaatgatgggtgatgggtgtataggcaaaa 6116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 369
Target Start/End: Complemental strand, 18341745 - 18341593
Alignment:
Q  217 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttta 316  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||| | |||||  ||| |||||||| || || | ||| |  ||||| |    
T  18341745 caaaatccccaaaatttcttcaatcaaaattgttcagattgaatctgaaatgatgggtggtggtcgtatgggcaaaaacagttctcaaacttgagcttca 18341646  T
Q  317 tctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    || | || ||| |||||||| |||||||| ||| ||||||||||||| |||||    
T  18341645 tcctcaaactctatgtttaacggtgatgtaagaatgcttgaatgttggtgtcc 18341593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 18623765 - 18623899
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| |||  || | ||| | | |||||| ||||||||||||| ||  ||||  ||  ||     
T  18623765 gctctttcttccccaaatatataaatttggaaccctaatgttataattcgtcacctagagttcaaaatccccaaaatttcttacatgaattgatgccaaa 18623864  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  18623865 gttcttccccaattcaaaaaacttaaaaccctaat 18623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 32134556 - 32134690
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||  |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  32134556 gctctttcttctacaaatatataaatttggaaccctaatgttataatttgtcacctatagttcaaaatcccccaaatttcttccatgaattgatgtcaat 32134655  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  32134656 gttcttccccaattcaaaaaacttaaaaccctaat 32134690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 341
Target Start/End: Complemental strand, 35400489 - 35400226
Alignment:
Q  78 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 177  Q
    |||||||||||||||||||||  |||||||| ||||||||||| | ||||   |||||||| | ||||||| ||||||    ||||  ||||||| ||||    
T  35400489 tataaaattggaaccctaattacacaatatgcaatctacactctataattatgaaaatttcctccaataataagtggtccaattctgtcccaatttaaaa 35400390  T
Q  178 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 277  Q
    | |||||||||  | |        | ||| || ||||  |||||||  ||||||||||| |||||||| | || || ||||||||||||||||| |||||    
T  35400389 aacttcaaacctaatttttttcgtagtgagtctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatggggggt 35400290  T
Q  278 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtg 341  Q
    |||  || ||| ||||    || ||||||||||| || ||||| || ||||| |||||||||||    
T  35400289 gggaatatgggaaaaaaaggttttgaaagtcaagtttcatcttcaaactccaagtttaatggtg 35400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 34328600 - 34328466
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat-tcccaaaatttctttcaataattagtggtaac 158  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| |||   ||| | | ||||||  ||||||||||||| ||  ||||  ||  ||     
T  34328600 ctctttcttccccaaatatataaatttggaaccctaatattataatttgtcgcctagagttcaaaatcccccaaaatttcttccatgaattgatgtcaat 34328501  T
Q  159 gttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34328500 gttcttccccaattcaaaaaacttaaaaccctaat 34328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 12738470 - 12738337
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12738470 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12738371  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12738370 ttcttccccaattcaaaaaacttaaaaccctaat 12738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 12801293 - 12801160
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12801293 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12801194  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12801193 ttcttccccaattcaaaaaacttaaaaccctaat 12801160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 27077256 - 27077123
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||  |||| |||||||||||||||||| ||| ||| |   | | | ||||||  | |||||||||| || |||||  ||  ||||    
T  27077256 ctctttcttccccaaatccataacattggaaccctaattttataatttgtcactgagagttcaaaatctctaaaatttcttccattaattgatgacaacg 27077157  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    ||||||||||||||||||| ||||||| ||||||    
T  27077156 ttcttccccaattcaaaaaacttcaaaacctaat 27077123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 33257559 - 33257426
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| ||| | |||||||||| |||||| |||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   |    
T  33257559 ctctttcttccccaattgtataaaattgtaaccctgattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcag 33257460  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    |||| |||||||||||||| ||||||||||||||    
T  33257459 ttctgccccaattcaaaaaacttcaaaccctaat 33257426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 33257309 - 33257262
Alignment:
Q  322 aagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 369  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  33257309 aagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 33257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 24497947 - 24497885
Alignment:
Q  8 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcc 70  Q
    ||||| |||||||| |||||| |||||| ||||||||| | |||||| |||||||||||||||    
T  24497947 agtgatcaaaatttacaaggaccaaattgattgatttgcataaaatgttttgctctttcttcc 24497885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 41494167 - 41494285
Alignment:
Q  72 caaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 171  Q
    |||||||||||| ||||||||| ||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || |||||||||||||    
T  41494167 caaatatataaatttggaacccgaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgacaaagttcttccccaat 41494266  T
Q  172 tcaaaaagcttcaaaccct 190  Q
    ||||||| ||| |||||||    
T  41494267 tcaaaaaacttaaaaccct 41494285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 30464263 - 30464344
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| |||||||||    
T  30464263 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttctt 30464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 28035772 - 28035852
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    |||||||||||||| ||||||||||||| |||| ||| ||| |||| | |||| |||| |  |||||| ||||||||||||    
T  28035772 ctctttcttcctcagatatataaaattgaaaccttaacttttcaatctctaatttacagtttaaaatttccaaaatttctt 28035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 27077010 - 27076963
Alignment:
Q  316 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 363  Q
    ||||| |||||| || |||||||||||||||||||| |||||||||||    
T  27077010 atcttcaagctctatttttaatggtgatgtgagagtacttgaatgttg 27076963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 28821860 - 28821770
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 149  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||    
T  28821860 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccattaatt 28821770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 29620495 - 29620529
Alignment:
Q  63 tttcttcctcaaatatataaaattggaaccctaat 97  Q
    ||||||||||||||||||||| |||||||||||||    
T  29620495 tttcttcctcaaatatataaatttggaaccctaat 29620529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 8541072 - 8541036
Alignment:
Q  61 tctttcttcctcaaatatataaaattggaaccctaat 97  Q
    |||||||||| |||||||||||| |||||||||||||    
T  8541072 tctttcttccccaaatatataaatttggaaccctaat 8541036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 19998229 - 19998149
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 140  Q
    ||||||||||| ||||| |||||||| | ||||||||||||| ||| ||| | ||| | |  ||||||| |||||||||||    
T  19998229 ctctttcttccccaaatctataaaatggaaaccctaattttataatttgtcacctagagtttaaaattctcaaaatttctt 19998149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 65 - 293
Target Start/End: Complemental strand, 38082 - 37856
Alignment:
Q  65 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 164  Q
    |||||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  38082 tcttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttctt 37983  T
Q  165 ccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 263  Q
    |||||||| ||| | | ||||||||||||        ||||||||||||||   |||||| |||||||| |||||| ||||| ||||  | |||||||||    
T  37982 ccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaaatcaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaatctg 37885  T
Q  264 aaatgatgaggggtgggtgtaagggcaaaa 293  Q
    ||||||||| ||||||||||| ||||||||    
T  37884 aaatgatga-gggtgggtgtatgggcaaaa 37856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 59 - 280
Target Start/End: Original strand, 57669 - 57890
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  57669 gctctttcttccccaaatatataaaattgaaaccctgattatactatctgtaatctacactccaaaataaccaaaatttcttcgaataataagtggtaac 57768  T
Q  159 gttcttcc-ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 257  Q
     ||||||| | |||||||||| ||||||||||| ||        |||||||| ||||| |||||||   ||||||||||  ||||||| | || || |||    
T  57769 attcttcctctaattcaaaaaacttcaaaccct-atttttttttattgaatctgaaatccaaaatccaaaaaatttctttcagcaaaactattgaaattg 57867  T
Q  258 aatctgaaatgatgaggggtggg 280  Q
    |||| ||||| ||||||||||||    
T  57868 aatccgaaatcatgaggggtggg 57890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 2710 - 2643
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 126  Q
    |||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||    
T  2710 gctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaat 2643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 2356 - 2423
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 126  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||| ||  |||||||||||||||||||    
T  2356 gctctttcttccccaaatatataaaattggaaccctcattatactatcagtaatctacactccaaaat 2423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 4446 - 4574
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||| | |  |||||  |||||| ||||| || |||||  ||  |||    
T  4446 gctctttctttctcaaatctataaaattggaactctaattttacaatttgtcatctagagtttaaaatctccaaaa-ttcttccattaattgatgacaac 4544  T
Q  159 gttcttccccaattcaaaaagcttcaaacc 188  Q
    |||||||| |||| | |||| |||||||||    
T  4545 gttcttcctcaatgctaaaaacttcaaacc 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 9666 - 9533
Alignment:
Q  60 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 159  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  9666 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 9567  T
Q  160 ttcttccccaattcaaaaagcttcaaaccctaat 193  Q
    || |||||||||||||||| ||| ||||||||||    
T  9566 tttttccccaattcaaaaaacttaaaaccctaat 9533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 1283 - 1164
Alignment:
Q  59 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 158  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  1283 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 1184  T
Q  159 gttcttccccaattcaaaaa 178  Q
    ||||||||||||||||||||    
T  1183 gttcttccccaattcaaaaa 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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