View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12614_high_12 (Length: 227)
Name: NF12614_high_12
Description: NF12614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12614_high_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 32530707 - 32530933
Alignment:
| Q |
1 |
aaaaatcggacgctccacggttaaatctggatccgcaccaataatcattgctgcggctccatcaccgaagagcgcctgtcctacaagtgaatctaaatga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32530707 |
aaaaatcggacgctccacggttaaatctggatccgcaccaataatcattgctgcggctccatcaccgaagagcgcctgtcctacaagtgaatctaaatga |
32530806 |
T |
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| Q |
101 |
gtatctgatggaccacggaaagtaactgcagtgatttcagaacaaacaacaagaactcttgcatttttgttattctcagcaagatctttcgctaagcgga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32530807 |
gtatctgatggaccacggaaagtaactgcagtgatttcagaacaaacaacaagaactcttgcatttttgttattctcagcaagatctttcgctaagcgga |
32530906 |
T |
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| Q |
201 |
gaactgtgccgcctgcaaaacaacctt |
227 |
Q |
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|||||||||||||||| |||||||||| |
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| T |
32530907 |
gaactgtgccgcctgcgaaacaacctt |
32530933 |
T |
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