View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12617_low_15 (Length: 275)

Name: NF12617_low_15
Description: NF12617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12617_low_15
NF12617_low_15
[»] chr5 (37 HSPs)
chr5 (14-261)||(31447510-31447763)
chr5 (10-202)||(27604535-27604728)
chr5 (10-202)||(5291657-5291849)
chr5 (10-202)||(40399989-40400180)
chr5 (10-183)||(39361270-39361443)
chr5 (10-187)||(15768362-15768539)
chr5 (10-187)||(37731057-37731234)
chr5 (10-187)||(6985320-6985497)
chr5 (10-187)||(9345562-9345739)
chr5 (10-187)||(14039619-14039796)
chr5 (10-187)||(14448131-14448308)
chr5 (10-187)||(14559163-14559340)
chr5 (10-187)||(17616641-17616818)
chr5 (10-187)||(17728498-17728675)
chr5 (10-187)||(22685025-22685202)
chr5 (10-187)||(23305868-23306045)
chr5 (10-187)||(23371531-23371708)
chr5 (10-187)||(23706378-23706555)
chr5 (10-187)||(27043314-27043491)
chr5 (10-187)||(27469583-27469760)
chr5 (10-187)||(31358115-31358292)
chr5 (10-187)||(36583604-36583781)
chr5 (10-187)||(42052390-42052567)
chr5 (10-187)||(24589159-24589336)
chr5 (10-187)||(30228551-30228728)
chr5 (10-187)||(39491992-39492169)
chr5 (10-187)||(24817946-24818123)
chr5 (10-180)||(22156074-22156244)
chr5 (10-187)||(35225084-35225261)
chr5 (10-186)||(15994389-15994565)
chr5 (10-186)||(31842987-31843163)
chr5 (17-185)||(20796650-20796818)
chr5 (39-185)||(1110295-1110441)
chr5 (10-126)||(36697196-36697312)
chr5 (96-187)||(36697303-36697394)
chr5 (122-181)||(19477001-19477060)
chr5 (20-182)||(23405403-23405565)
[»] chr7 (23 HSPs)
chr7 (12-262)||(19992966-19993221)
chr7 (10-202)||(21001956-21002148)
chr7 (10-202)||(9434409-9434601)
chr7 (10-202)||(5686704-5686897)
chr7 (10-202)||(6876791-6876982)
chr7 (10-187)||(1988726-1988903)
chr7 (10-187)||(8011635-8011812)
chr7 (10-182)||(22090372-22090544)
chr7 (10-187)||(24735911-24736088)
chr7 (10-186)||(2715185-2715361)
chr7 (10-180)||(4213219-4213389)
chr7 (10-180)||(17959623-17959793)
chr7 (10-187)||(9086415-9086592)
chr7 (10-187)||(26399644-26399821)
chr7 (10-187)||(40051652-40051829)
chr7 (10-187)||(11097198-11097376)
chr7 (10-187)||(11006375-11006552)
chr7 (10-187)||(26698677-26698854)
chr7 (10-187)||(42867016-42867193)
chr7 (10-178)||(8618587-8618755)
chr7 (10-180)||(168090-168260)
chr7 (10-187)||(466541-466718)
chr7 (19-181)||(15887203-15887365)
[»] chr3 (33 HSPs)
chr3 (12-261)||(16390427-16390682)
chr3 (10-202)||(37867645-37867838)
chr3 (10-202)||(37876163-37876356)
chr3 (10-183)||(19779600-19779773)
chr3 (10-253)||(6499864-6500113)
chr3 (10-182)||(6219538-6219710)
chr3 (10-261)||(9992794-9993052)
chr3 (10-180)||(20682617-20682787)
chr3 (10-186)||(13382153-13382329)
chr3 (10-186)||(13392747-13392923)
chr3 (10-187)||(4744897-4745074)
chr3 (10-187)||(5511853-5512030)
chr3 (10-187)||(5546505-5546682)
chr3 (10-187)||(24661074-24661251)
chr3 (10-187)||(5626861-5627038)
chr3 (10-187)||(5875146-5875323)
chr3 (10-187)||(12295704-12295881)
chr3 (10-187)||(16477438-16477615)
chr3 (10-187)||(24392956-24393133)
chr3 (10-187)||(41684833-41685010)
chr3 (10-180)||(14466815-14466985)
chr3 (10-187)||(8775863-8776040)
chr3 (10-187)||(18485196-18485373)
chr3 (10-187)||(38195930-38196107)
chr3 (10-187)||(39373260-39373437)
chr3 (10-186)||(23758440-23758616)
chr3 (10-180)||(13122889-13123059)
chr3 (10-187)||(28323701-28323878)
chr3 (17-185)||(29470675-29470843)
chr3 (10-186)||(12248329-12248505)
chr3 (10-104)||(10635920-10636014)
chr3 (100-187)||(10654248-10654335)
chr3 (122-182)||(13072979-13073039)
[»] chr6 (27 HSPs)
chr6 (10-245)||(27373866-27374107)
chr6 (10-245)||(27464219-27464460)
chr6 (10-202)||(9122013-9122205)
chr6 (12-270)||(25590268-25590532)
chr6 (10-186)||(12856097-12856273)
chr6 (10-186)||(26865940-26866116)
chr6 (10-187)||(3662491-3662668)
chr6 (10-187)||(12726317-12726494)
chr6 (10-187)||(17983618-17983795)
chr6 (10-187)||(25788875-25789052)
chr6 (10-187)||(26026566-26026743)
chr6 (10-187)||(27342874-27343051)
chr6 (10-187)||(27403614-27403791)
chr6 (10-187)||(16931541-16931718)
chr6 (10-180)||(34816655-34816825)
chr6 (10-178)||(32971358-32971526)
chr6 (93-184)||(7669375-7669466)
chr6 (19-181)||(12359298-12359460)
chr6 (10-126)||(27385644-27385760)
chr6 (10-126)||(27476057-27476173)
chr6 (10-126)||(4632118-4632234)
chr6 (10-126)||(32310543-32310659)
chr6 (96-187)||(4632036-4632127)
chr6 (96-187)||(27385562-27385653)
chr6 (96-187)||(27475975-27476066)
chr6 (96-187)||(32310650-32310741)
chr6 (17-182)||(32780124-32780289)
[»] chr2 (20 HSPs)
chr2 (10-202)||(43083816-43084009)
chr2 (10-252)||(29245316-29245567)
chr2 (10-202)||(24337264-24337454)
chr2 (10-186)||(40223475-40223651)
chr2 (10-187)||(11404345-11404522)
chr2 (10-187)||(43346540-43346717)
chr2 (10-179)||(4211085-4211254)
chr2 (10-187)||(10268123-10268300)
chr2 (10-187)||(10278700-10278877)
chr2 (10-187)||(27222561-27222738)
chr2 (10-187)||(35254174-35254351)
chr2 (10-187)||(35264783-35264960)
chr2 (10-180)||(22959203-22959373)
chr2 (10-261)||(9907060-9907308)
chr2 (10-186)||(9772231-9772407)
chr2 (40-186)||(34803301-34803447)
chr2 (10-44)||(34799692-34799726)
chr2 (17-182)||(21171305-21171470)
chr2 (17-182)||(28730751-28730916)
chr2 (10-43)||(35759242-35759275)
[»] scaffold1216 (1 HSPs)
scaffold1216 (12-270)||(176-439)
[»] chr1 (17 HSPs)
chr1 (10-202)||(4168384-4168575)
chr1 (10-202)||(19180067-19180259)
chr1 (10-202)||(5649257-5649448)
chr1 (10-182)||(21864824-21864996)
chr1 (10-187)||(38096206-38096383)
chr1 (10-187)||(51655375-51655552)
chr1 (10-187)||(7508420-7508597)
chr1 (10-187)||(36245931-36246108)
chr1 (10-187)||(35400043-35400220)
chr1 (10-187)||(35647568-35647745)
chr1 (10-187)||(47617437-47617614)
chr1 (10-180)||(12622677-12622847)
chr1 (10-187)||(5834347-5834524)
chr1 (10-187)||(3172743-3172920)
chr1 (10-186)||(12731631-12731807)
chr1 (10-186)||(12742224-12742400)
chr1 (17-185)||(153158-153326)
[»] chr8 (20 HSPs)
chr8 (10-184)||(19129938-19130112)
chr8 (10-202)||(26112451-26112642)
chr8 (10-187)||(15766081-15766258)
chr8 (10-187)||(15790218-15790395)
chr8 (10-187)||(36294108-36294285)
chr8 (10-187)||(209087-209264)
chr8 (10-187)||(242991-243168)
chr8 (10-187)||(722710-722887)
chr8 (10-187)||(796361-796538)
chr8 (10-187)||(3358139-3358316)
chr8 (10-187)||(9342313-9342490)
chr8 (10-187)||(29077889-29078066)
chr8 (10-187)||(32087203-32087380)
chr8 (10-187)||(13687498-13687675)
chr8 (10-187)||(36079113-36079290)
chr8 (10-180)||(6152292-6152462)
chr8 (19-181)||(19226134-19226296)
chr8 (19-181)||(30324171-30324333)
chr8 (10-126)||(44482387-44482503)
chr8 (96-187)||(44482305-44482396)
[»] chr4 (16 HSPs)
chr4 (12-270)||(40469482-40469745)
chr4 (10-184)||(24026926-24027100)
chr4 (10-182)||(17919294-17919466)
chr4 (10-202)||(19953843-19954036)
chr4 (10-187)||(55754716-55754893)
chr4 (10-187)||(10750056-10750233)
chr4 (10-187)||(10963825-10964002)
chr4 (10-187)||(18761969-18762146)
chr4 (10-187)||(24641490-24641667)
chr4 (10-187)||(36019510-36019687)
chr4 (10-180)||(16257112-16257282)
chr4 (10-186)||(21997592-21997768)
chr4 (10-187)||(27657823-27658000)
chr4 (10-186)||(451752-451928)
chr4 (10-186)||(30935979-30936155)
chr4 (122-182)||(16306388-16306448)
[»] scaffold0133 (1 HSPs)
scaffold0133 (10-187)||(32312-32489)
[»] scaffold0105 (1 HSPs)
scaffold0105 (10-187)||(46482-46659)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-185)||(52481-52649)
[»] scaffold0906 (1 HSPs)
scaffold0906 (10-185)||(3424-3599)
[»] scaffold0747 (1 HSPs)
scaffold0747 (12-85)||(3556-3629)
[»] scaffold0398 (2 HSPs)
scaffold0398 (19-185)||(3250-3416)
scaffold0398 (107-185)||(11593-11671)
[»] scaffold1002 (2 HSPs)
scaffold1002 (96-185)||(2863-2952)
scaffold1002 (17-124)||(2763-2870)
[»] scaffold0251 (1 HSPs)
scaffold0251 (114-181)||(23758-23825)
[»] scaffold0454 (2 HSPs)
scaffold0454 (10-126)||(2526-2642)
scaffold0454 (96-187)||(2444-2535)


Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 31447510 - 31447763
Alignment:
Q  14 catcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaag 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| ||    
T  31447510 catcactcctttctatccagaagaagagtacattacaagggctgctagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttcag 31447609  T
Q  114 aagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg------tttttgttc 207  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      |||||||||    
T  31447610 aagaaggatgagcaaattaagtatattttggaacagatgtataagcaagcccaaccttagttgcacacccaacattctttgcttgttttaatttttgttc 31447709  T
Q  208 taagttgttagtagctttgcctttgtatcttgacttatctatataaatattatc 261  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  31447710 taagttgttagtagctttgcctttgtatcttaacttatctatataaatgttatc 31447763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 27604728 - 27604535
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  27604728 tggacatcactcctttctatccagaagaagagtacatcacaaggactgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 27604629  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact-ttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||||    
T  27604628 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacccatttattctttgcttgtttt 27604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 5291849 - 5291657
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  5291849 tggacatcactcctttctatccagaagaagagtacattataagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 5291750  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  5291749 taagaagaaggatgagcaaattaagtatctcttggaatagatgtataagcaagcccaaccttagttgcacacccagttttctttgcttgtttt 5291657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 40399989 - 40400180
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  40399989 tggacatcactcctttctatccagaagaagaatacattacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 40400088  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||| ||| ||||||||||||    
T  40400089 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccctagttgcaca-ccaattttttttgcttgtttt 40400180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 39361270 - 39361443
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  39361270 tggacatcactcctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 39361369  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccc 183  Q
     |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  39361370 caagaagaatgatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 39361443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 15768362 - 15768539
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||||||||||||||||||||    
T  15768362 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 15768461  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  15768462 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 15768539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 37731234 - 37731057
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||||||||||||||||||||    
T  37731234 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 37731135  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  37731134 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 37731057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 6985320 - 6985497
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  6985320 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 6985419  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  6985420 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 6985497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 9345562 - 9345739
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  9345562 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 9345661  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  9345662 ttagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 9345739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 14039619 - 14039796
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  14039619 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 14039718  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  14039719 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 14039796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 14448308 - 14448131
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  14448308 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 14448209  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  14448208 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 14448131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 14559340 - 14559163
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  14559340 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 14559241  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  14559240 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 14559163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 17616641 - 17616818
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |  ||||||||||||||||||||||||||||||||    
T  17616641 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctact 17616740  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  17616741 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 17616818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 17728498 - 17728675
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |  ||||||||||||||||||||||||||||||||    
T  17728498 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctact 17728597  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  17728598 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 17728675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 22685025 - 22685202
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  22685025 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 22685124  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  22685125 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 22685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 23305868 - 23306045
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  23305868 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 23305967  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  23305968 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 23306045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 23371531 - 23371708
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  23371531 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 23371630  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  23371631 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 23371708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 23706378 - 23706555
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  23706378 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 23706477  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  23706478 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 23706555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 27043491 - 27043314
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  27043491 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 27043392  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  27043391 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 27043314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 27469583 - 27469760
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  27469583 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 27469682  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  27469683 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 27469760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 31358115 - 31358292
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |  ||||||||||||||||||||||||||||||||    
T  31358115 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctact 31358214  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  31358215 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 31358292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 36583781 - 36583604
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  36583781 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 36583682  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  36583681 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 36583604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 42052390 - 42052567
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  42052390 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 42052489  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  42052490 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 42052567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 24589336 - 24589159
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||  ||||||||||||||||    
T  24589336 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgaggtaaaaggatgagctact 24589237  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  24589236 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 24589159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 30228728 - 30228551
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  30228728 tggacattactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 30228629  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  30228628 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 30228551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 39492169 - 39491992
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| ||||||||||  ||||||||||||||||    
T  39492169 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgaggaaaaaggatgagctact 39492070  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  39492069 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 39491992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 24818123 - 24817946
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  24818123 tggacatcaatcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 24818024  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  24818023 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 24817946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 22156074 - 22156244
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| ||||| |||||||||||    
T  22156074 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 22156173  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  22156174 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 35225084 - 35225261
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||| || |||| ||||  |  |||||||||||| |||||||||||||||||    
T  35225084 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35225183  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  35225184 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 35225261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 15994565 - 15994389
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || ||||| |||||||||||    
T  15994565 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaatgatgagctact 15994466  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  15994465 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 15994389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 31842987 - 31843163
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  31842987 tggacatcactccttactatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 31843086  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || |||||  | || ||| || ||||||||||||||||||||||||||||||||||||    
T  31843087 tcagaagaaagatgatcagatcaagtatttcttagaatagttgtataagcaagcccaaccttagttgcacacccaac 31843163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 20796650 - 20796818
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||| ||||||||  ||||  |||  ||||| || |  ||||| ||||||||| |||||| ||||||||| | |||| |||||    
T  20796650 cactcctttctatccagaagatgagtacatttcaagaactgttagaattcaagccgggttgaaaagaagactgagagcaaaggatgaacaacttcagaag 20796749  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    ||||||||||| ||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  20796750 aaggatgagcagattaaatatcttttggaacagatgtataagctagccaaaccttagttgcacacccaa 20796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 1110441 - 1110295
Alignment:
Q  39 gagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatgagcaaattaagtacc 138  Q
    ||||||||  ||||| |||| ||||| |||| |||||| ||||| ||| |||||| ||||||||| | |||| ||||||||||||||||||||||||| |    
T  1110441 gagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaaggatgagcaaattaagtatc 1110342  T
Q  139 ttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    | ||||||||| |||||||||||||| ||||||||||||||||||||    
T  1110341 tattggaacagttgtataagcaagccaaaccttagttgcacacccaa 1110295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 36697196 - 36697312
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||  ||| ||||  ||| || |   | ||||| ||||| || |||||    
T  36697196 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 36697295  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  36697296 tcagaagaaggatgagc 36697312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 36697303 - 36697394
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  36697303 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaact 36697394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 19477001 - 19477060
Alignment:
Q  122 tgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacac 181  Q
    |||||| ||||| ||| || |||||||||||| ||||| |||| ||||||||||||||||    
T  19477001 tgagcagattaaatactttatggaacagatgtctaagctagccaaaccttagttgcacac 19477060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 23405403 - 23405565
Alignment:
Q  20 tcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaag 119  Q
    |||||||||||||||||  || |||||| |||||||||  ||||| || |  ||| | | ||||||| ||||||  ||||||||   |||| ||||| ||    
T  23405403 tcctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaagcag 23405502  T
Q  120 gatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
      |||||| ||||| ||| | ||||||||  ||| ||||| | || |||||||||||||||||    
T  23405503 tctgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagttgcacacc 23405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 12 - 262
Target Start/End: Original strand, 19992966 - 19993221
Alignment:
Q  12 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctactta 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||||||||||||||||||||| ||||||    
T  19992966 gacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcatgctggattcaaaagaagaatgagagaaaaggatgagttactta 19993065  T
Q  112 agaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg-----tttttgtt 206  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||     ||||||||    
T  19993066 agaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgtttaatttttgtt 19993165  T
Q  207 ctaagttgttagtagctttgcctttgtatcttgacttatctatataaatattatct 262  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  19993166 ctaagttgttagtagctttgcctttgtatcttatcttatctatataaatattatct 19993221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 21001956 - 21002148
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  21001956 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 21002055  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21002056 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaattttctttgcttgtttt 21002148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 9434601 - 9434409
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  9434601 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 9434502  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9434501 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccatttttctttgcttgtttt 9434409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 5686897 - 5686704
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  5686897 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 5686798  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccca-actttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  5686797 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccattttttctttgcttgtttt 5686704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 6876791 - 6876982
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  6876791 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 6876890  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  6876891 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc-attttttttgcttgtttt 6876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 1988903 - 1988726
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||||||||||||||||||||    
T  1988903 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 1988804  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  1988803 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 1988726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 8011635 - 8011812
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||||||||||||||||||||    
T  8011635 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 8011734  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  8011735 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 8011812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 22090544 - 22090372
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  22090544 tggacatcactcctttctatccagaagaagagtacatcacaagggcaaccagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 22090445  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||||    
T  22090444 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 22090372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 24736088 - 24735911
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  24736088 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 24735989  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  24735988 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 24735911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 2715185 - 2715361
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||||||||||||||    
T  2715185 tggacatcactccttactatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 2715284  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | | ||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  2715285 tcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 2715361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 4213389 - 4213219
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||| ||||| ||||||||||||||| ||||| |||||||||||    
T  4213389 tggacatcactcctttctatccagaagaagagtacattacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaatgatgagctact 4213290  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     ||||||||||||||| |||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  4213289 caagaagaaggatgagaaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 4213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 17959623 - 17959793
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  |||||||||||||| |||||||||||||||||    
T  17959623 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagaatgagggaaaaggatgagctact 17959722  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  17959723 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 17959793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 9086592 - 9086415
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  9086592 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 9086493  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  9086492 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 9086415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 26399644 - 26399821
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  26399644 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 26399743  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||| | |||||||||||||||||||||||||||||||||||||    
T  26399744 tcagaagaaggatgatcagatcaagtatctcttagaactgttgtataagcaagcccaaccttagttgcacacccaact 26399821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 40051652 - 40051829
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||| |||||| |||||||||||||||||    
T  40051652 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaataatgagggaaaaggatgagctact 40051751  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  40051752 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 40051829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 11097376 - 11097198
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaag-ggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctac 108  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||| ||||| || | ||| | ||||||||||||||| ||||||||||||||||    
T  11097376 tggacatcactcctttctatccagaagaagagtacatcactagtggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctac 11097277  T
Q  109 ttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    || ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  11097276 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 11097198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 11006552 - 11006375
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  11006552 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 11006453  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  11006452 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 11006375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 26698677 - 26698854
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  26698677 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 26698776  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || ||| || |||||||||||||||||||||||||||||| ||||||    
T  26698777 tcagaagaaggatgatcagatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacatccaact 26698854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 42867193 - 42867016
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  42867193 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 42867094  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  42867093 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 42867016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 8618755 - 8618587
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  |||| ||||||||| |||||||||||||||||    
T  8618755 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaataagaatgagggaaaaggatgagctact 8618656  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgca 178  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||    
T  8618655 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 8618587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 168260 - 168090
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| ||||| |||||||||||    
T  168260 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 168161  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  168160 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 168090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 466541 - 466718
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  466541 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 466640  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  466641 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 466718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 15887203 - 15887365
Alignment:
Q  19 ctcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaa 118  Q
    ||||||| ||||||||||| || ||||   |||||||||  ||||| || | |||| | ||||||||| |||||| | || | || | |||| |||||||    
T  15887203 ctcctttttatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgagagcacagaaagaacaacttcagaagaa 15887302  T
Q  119 ggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacac 181  Q
     ||||||||  |||| || || ||||||||||||| ||||| |||| ||||||||||||||||    
T  15887303 tgatgagcaggttaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 15887365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 261
Target Start/End: Original strand, 16390427 - 16390682
Alignment:
Q  12 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctactta 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||     
T  16390427 gacatcactcctttctatccagaagaagagtacatcacaagggcagccagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttc 16390526  T
Q  112 agaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg------tttttgt 205  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||      ||||||     
T  16390527 agaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccgacattctttgcttgttttaatttttgc 16390626  T
Q  206 tctaagttgttagtagctttgcctttgtatcttgacttatctatataaatattatc 261  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  16390627 tctaagttgttagtagctttgcctttgtatcttaacttatctatataaatgttatc 16390682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 37867838 - 37867645
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  37867838 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 37867739  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact-ttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||  | |||||||||||||||    
T  37867738 taagaagaaggatgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacacccatttattctttgcttgtttt 37867645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 37876356 - 37876163
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  37876356 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 37876257  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact-ttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||  | |||||||||||||||    
T  37876256 taagaagaaggatgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacacccatttattctttgcttgtttt 37876163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 10 - 183
Target Start/End: Complemental strand, 19779773 - 19779600
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  19779773 tggacatcactcctttctatccagaagaagagtacatcataagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 19779674  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccc 183  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19779673 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 19779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 6499864 - 6500113
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  6499864 tggacatcactcctttctatcaagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctact 6499963  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt------t 203  Q
    | ||||||||||||| || || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  | || |||||||||      |    
T  6499964 tcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaacacttttagcttgtttttacttgt 6500063  T
Q  204 gttctaagttgttagtagctttgcctttgtatcttgacttatctatataa 253  Q
    ||||||| || | ||||||||| |||||||||||| |||| || ||||||    
T  6500064 gttctaaattatcagtagcttttcctttgtatcttaacttgtcaatataa 6500113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 6219538 - 6219710
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  6219538 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 6219637  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
    |||| |||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  6219638 taagcagaaggatgaacaaattaagtatctcttggaacagatgtacaagcaagcccaaccttagttgcacacc 6219710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 9992794 - 9993052
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||    
T  9992794 tggacatcactcctttctatcccgaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaagaagaatgagagaaaaggatgagctact 9992893  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgttttt------ 203  Q
    ||||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||  |||| ||||||||||          
T  9992894 taagaagaaggatgatcatatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactcttagcttgtttttactttg 9992993  T
Q  204 gttct-aagttgttagtagctttgcctttgtatcttgacttatctatataaatattatc 261  Q
    ||||| || || | ||||||||||||| |||||||| | || || ||||||||||||||    
T  9992994 gttctaaatttatcagtagctttgcctctgtatcttaatttgtcaatataaatattatc 9993052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 20682617 - 20682787
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  20682617 tggacatcactcctttctatacagaagaagagtacatcacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 20682716  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     |||||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  20682717 caagaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 20682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 13382153 - 13382329
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||||||||||||||    
T  13382153 tggacatcactcctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 13382252  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  13382253 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 13382329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 13392747 - 13392923
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||||||||||||||    
T  13392747 tggacatcactcctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 13392846  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  13392847 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 13392923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 4745074 - 4744897
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  4745074 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 4744975  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  4744974 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 4744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 5512030 - 5511853
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  5512030 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 5511931  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  5511930 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 5511853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 5546505 - 5546682
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  5546505 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 5546604  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  5546605 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 5546682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 24661251 - 24661074
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  24661251 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 24661152  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  24661151 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 24661074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 5626861 - 5627038
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  5626861 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 5626960  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  5626961 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 5627038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 5875146 - 5875323
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| ||||||  ||||||||| |||||||||||||||||    
T  5875146 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacaaagaatgagggaaaaggatgagctact 5875245  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  5875246 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 5875323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 12295704 - 12295881
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  12295704 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 12295803  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  12295804 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 12295881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 16477615 - 16477438
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  16477615 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 16477516  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  16477515 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 16477438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 24392956 - 24393133
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  24392956 tggacatcactcctttctattcagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 24393055  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  24393056 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 24393133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 41685010 - 41684833
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  41685010 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 41684911  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  41684910 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 41684833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 14466985 - 14466815
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| |||||||||||||||||    
T  14466985 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctact 14466886  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  14466885 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 14466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 8776040 - 8775863
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  8776040 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 8775941  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  8775940 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 8775863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 18485373 - 18485196
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  18485373 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 18485274  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  18485273 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 18485196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 38196107 - 38195930
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  38196107 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 38196008  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  38196007 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 38195930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 39373437 - 39373260
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  39373437 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 39373338  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  39373337 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 39373260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 23758616 - 23758440
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  23758616 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 23758517  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  23758516 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 23758440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 13123059 - 13122889
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||  |||||  ||||||||| |||| |||||||||||||||||    
T  13123059 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcattctgggtacaaaagaagattgagggaaaaggatgagctact 13122960  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  13122959 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 13122889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 28323701 - 28323878
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  28323701 tggacatcactcctttctatcctgaagaagagtatatctcaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 28323800  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  28323801 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 28323878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 29470675 - 29470843
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||| ||| ||||  ||||| |||| ||||| |||| |||||| ||||| ||| |||||| ||||||||| | |||| |||||    
T  29470675 cactcctttctatccagaagatgaggacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaag 29470774  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||    
T  29470775 aaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 29470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 12248329 - 12248505
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  12248329 tggacatcactccttactatccagaagaagaatacatcacaagggctgctagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12248428  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||| | || || |||||| ||| ||||||||||||||||||||||||||||||||    
T  12248429 tcagaagaaggatgatcagatcaagcatctcttagaacagttgtttaagcaagcccaaccttagttgcacacccaac 12248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 10635920 - 10636014
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgag 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | |||||||||||||||||||    
T  10635920 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgag 10636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 10654248 - 10654335
Alignment:
Q  100 atgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||| ||||||| ||||| ||||| ||||| || || ||| || |||||||||||||||||||||||||||||||||||||    
T  10654248 atgagctacttcagaagaaagatgatcaaatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacacccaact 10654335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 13073039 - 13072979
Alignment:
Q  122 tgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
    |||||| |||||||||||  |||||||  ||| ||||| |||| |||||||||||||||||    
T  13073039 tgagcagattaagtacctaatggaacaagtgtctaagctagccaaaccttagttgcacacc 13072979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 27374107 - 27373866
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  27374107 tggacatcactcctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 27374008  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg------ttttt 203  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||      |||||    
T  27374007 tcagaagaaggatgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgttttaattttt 27373908  T
Q  204 gttctaagttgttagtagctttgcctttgtatcttgacttat 245  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  27373907 gttctaagttgttagtagttttgcctttgtatcttaacttat 27373866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 27464460 - 27464219
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  27464460 tggacatcactcctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 27464361  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg------ttttt 203  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||      |||||    
T  27464360 tcagaagaaggatgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgttttaattttt 27464261  T
Q  204 gttctaagttgttagtagctttgcctttgtatcttgacttat 245  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  27464260 gttctaagttgttagtagttttgcctttgtatcttaacttat 27464219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 9122013 - 9122205
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  9122013 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 9122112  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9122113 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaattttctttgcttgtttt 9122205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 270
Target Start/End: Complemental strand, 25590532 - 25590268
Alignment:
Q  12 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctactta 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| || ||||    
T  25590532 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgctgggtttaaaagaaggatgagagagaaggatgaacttctta 25590433  T
Q  112 agaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtt------tttgt 205  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||| ||||| |||      |||||    
T  25590432 agaagaaggatgagcaaattaagtacctcttagaacagatgtataagcaagcccaaccttagttgcacacccatttttc-ttgctagttttaatctttgt 25590334  T
Q  206 tctaagt-tgttagtagctttgcctttgtatcttgacttatctatataaatattatctctgcttct 270  Q
    |||||||   ||| | | ||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  25590333 tctaagtactttaattgatttgcttttgtatcttaacttatctatataaatattatctttgcttct 25590268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 12856273 - 12856097
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||||||||||||||    
T  12856273 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 12856174  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  12856173 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12856097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 26866116 - 26865940
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  26866116 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 26866017  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  26866016 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 26865940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 3662668 - 3662491
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  3662668 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 3662569  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  3662568 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 3662491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 12726317 - 12726494
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  12726317 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 12726416  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  12726417 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 12726494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 17983618 - 17983795
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  17983618 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 17983717  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  17983718 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 17983795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 25789052 - 25788875
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  25789052 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 25788953  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  25788952 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 25788875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 26026743 - 26026566
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  26026743 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 26026644  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  26026643 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 26026566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 27343051 - 27342874
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  27343051 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 27342952  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  27342951 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 27342874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 27403791 - 27403614
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  27403791 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 27403692  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  27403691 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 27403614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 16931718 - 16931541
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  16931718 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 16931619  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || ||||||  ||||||||||||||||||||||||||||||||||||    
T  16931618 tcagaagaaggatgatcagatcaagtatctcttagaacagtngtataagcaagcccaaccttagttgcacacccaact 16931541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 34816655 - 34816825
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| ||||| |||||||||||    
T  34816655 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 34816754  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  34816755 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 34816825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 32971358 - 32971526
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| ||||| |||||||||||    
T  32971358 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaatgatgagctact 32971457  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgca 178  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||    
T  32971458 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 32971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 7669375 - 7669466
Alignment:
Q  93 gaaaaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccca 184  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  7669375 gaaaaggatgagctactcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 7669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 12359460 - 12359298
Alignment:
Q  19 ctcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaa 118  Q
    ||||||||||||||||||| || ||||   |||||||||  ||||| || |  ||| | ||||| ||| |||||| |||| ||||   |||| |||||||    
T  12359460 ctcctttctatccagaagatgattacacttcaagggctgatagaattcaagcagggctgaaaagcagattgagagcaaagaatgaagaacttcagaagaa 12359361  T
Q  119 ggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacac 181  Q
    |||||| || ||||| || || ||||||||||||| ||||| |||| ||||||||||||||||    
T  12359360 ggatgatcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 12359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 27385760 - 27385644
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||| |||| ||||  ||| || |   | ||||| ||||| || |||||    
T  27385760 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactact 27385661  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  27385660 tcagaagaaggatgagc 27385644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 27476173 - 27476057
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||| |||| ||||  ||| || |   | ||||| ||||| || |||||    
T  27476173 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactact 27476074  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  27476073 tcagaagaaggatgagc 27476057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 4632234 - 4632118
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||  ||| ||||  ||| || |   | ||||| ||||| || |||||    
T  4632234 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 4632135  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  4632134 tcagaagaaggatgagc 4632118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 32310543 - 32310659
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||  ||| ||||  ||| || |   | ||||| ||||| || |||||    
T  32310543 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 32310642  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  32310643 tcagaagaaggatgagc 32310659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 4632127 - 4632036
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  4632127 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaact 4632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 27385653 - 27385562
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  27385653 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaact 27385562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 27476066 - 27475975
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  27476066 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaact 27475975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 32310650 - 32310741
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  32310650 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaact 32310741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 32780124 - 32780289
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||  || |||||| |||||||||  ||||| || |  ||| | | ||||||| ||||||  ||||||||   |||| |||||    
T  32780124 cactcctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaag 32780223  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
     ||  |||||| ||||| ||| | ||||||||  ||| ||||| | || |||||||||| ||||||    
T  32780224 cagtctgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagtttcacacc 32780289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 166; Significance: 7e-89; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 43084009 - 43083816
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43084009 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctact 43083910  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact-ttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||||    
T  43083909 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacccatttattctttgcttgtttt 43083816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 10 - 252
Target Start/End: Complemental strand, 29245567 - 29245316
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  29245567 tggacatcactcctttctatccagaagaagagtacattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 29245468  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccca--actttctttgcttgtttt----- 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||||||||||         
T  29245467 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacccatttttttctttgcttgttttaatct 29245368  T
Q  203 -tgttctaagt-tgttagtagctttgcctttgtatcttgacttatctatata 252  Q
     |||||||||| | ||||| || |||| |||||||||| |||| ||||||||    
T  29245367 ctgttctaagtattttagttgccttgcatttgtatcttaacttttctatata 29245316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 24337264 - 24337454
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  24337264 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 24337363  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
     |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  | ||| ||||||||||||    
T  24337364 caagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc--aatttttttgcttgtttt 24337454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 40223651 - 40223475
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||||||||||||||    
T  40223651 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 40223552  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||||||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  40223551 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 40223475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 11404345 - 11404522
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  11404345 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 11404444  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  11404445 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 11404522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 43346717 - 43346540
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  43346717 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 43346618  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  43346617 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 43346540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 4211254 - 4211085
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| ||| |  ||||||||||||||||||||||||||||||||    
T  4211254 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagagaaaaggatgagctact 4211155  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcac 179  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||    
T  4211154 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcac 4211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 10268300 - 10268123
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  10268300 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 10268201  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | |||| |||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  10268200 tcagaaaaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 10268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 10278877 - 10278700
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  10278877 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 10278778  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | |||| |||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  10278777 tcagaaaaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 10278700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 27222738 - 27222561
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  27222738 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 27222639  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  27222638 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 27222561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 35254351 - 35254174
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  35254351 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35254252  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  35254251 taagaagaaagatgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 35254174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 35264960 - 35264783
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  35264960 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35264861  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  35264860 taagaagaaagatgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 35264783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 22959203 - 22959373
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| ||||| |||||||||||    
T  22959203 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 22959302  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  22959303 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22959373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 9907060 - 9907308
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  9907060 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 9907159  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttttgttcta 209  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||| |||||||||||||||||||||||||||     | ||||||||||    |     
T  9907160 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagtaagcccaaccttagttgcacacccaac---actagcttgttttttacttt 9907256  T
Q  210 agttgttagtagctttgcctttgtatcttgacttatctatataaatattatc 261  Q
     ||| |||||||||||| ||||||||||| || | ||| |||||||||||||    
T  9907257 tgttcttagtagctttgtctttgtatcttaacctttctttataaatattatc 9907308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 9772231 - 9772407
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  9772231 tggacatcactccttactatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 9772330  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  9772331 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 9772407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 34803301 - 34803447
Alignment:
Q  40 agtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatgagcaaattaagtacct 139  Q
    ||||||||||||||| ||| ||||| || | ||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| || || ||||| ||    
T  34803301 agtacatcacaagggttgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgaactacttcagaagaaggatgatcagatcaagtatct 34803400  T
Q  140 tttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
     || |||||| ||||||||||||||||||||||||||||||||||||    
T  34803401 cttagaacagttgtataagcaagcccaaccttagttgcacacccaac 34803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 34799692 - 34799726
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtac 44  Q
    |||||||||||||||||||||||||||||||||||    
T  34799692 tggacatcactcctttctatccagaagaagagtac 34799726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 21171305 - 21171470
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||  || |||||| |||||||||  ||||| || |  ||| | | ||||||| ||||||  ||||||||   |||| |||||    
T  21171305 cactcctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaag 21171404  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
     ||  |||||| ||||| ||| | ||||||||  ||| ||||| | || |||||||||||||||||    
T  21171405 cagtctgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagttgcacacc 21171470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 28730751 - 28730916
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||  || |||||| |||||||||  ||||| || |  ||| | | ||||||| ||||||  ||||||||   |||| |||||    
T  28730751 cactcctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaag 28730850  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
     ||  |||||| ||||| ||| | ||||||||  ||| ||||| | || |||||||||||||||||    
T  28730851 tagtctgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagttgcacacc 28730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 35759242 - 35759275
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  35759242 tggacatcactcctttctatccagaagaagagta 35759275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 12 - 270
Target Start/End: Complemental strand, 439 - 176
Alignment:
Q  12 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctactta 111  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||     
T  439 gacaacactcctttctatccataagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttc 340  T
Q  112 agaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg-----tttttgtt 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||     ||||||||    
T  339 agaagaaggatgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacacccatc-ttctttgcttgtttaatttttgtt 241  T
Q  207 ctaagt-tgttagtagctttgcctttgtatcttgacttatctatataaatattatctctgcttct 270  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||    
T  240 ctaagtattttagtagctttgcctttgtatcttgacttatctttataaatgttatcattgcttct 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 4168575 - 4168384
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  4168575 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 4168476  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  4168475 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc-attttttttgcttgtttt 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 19180259 - 19180067
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  19180259 tggacatcactcctttctatctagaagaagagtatattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 19180160  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  19180159 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccagttttctttgcttgtttt 19180067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 5649257 - 5649448
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  5649257 tggacatcactcctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 5649356  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
     || |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  5649357 caataagaaggatgagcagattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcaca-ccaattttttttgcttgtttt 5649448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 21864996 - 21864824
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  21864996 tggacatcactcctttctatccagaagaagagtacatcacaagggcaacaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 21864897  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||||    
T  21864896 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 21864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 38096383 - 38096206
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||||||||||||||||||||    
T  38096383 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 38096284  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | | ||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  38096283 tcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 38096206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 51655375 - 51655552
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  51655375 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 51655474  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  51655475 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 51655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 7508597 - 7508420
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  7508597 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 7508498  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  7508497 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 7508420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 36245931 - 36246108
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  36245931 tggacatcactcctttctatccataagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 36246030  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  36246031 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 36246108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 35400043 - 35400220
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  35400043 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35400142  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  35400143 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 35400220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 35647568 - 35647745
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  35647568 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35647667  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  35647668 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 35647745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 47617437 - 47617614
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  47617437 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 47617536  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  47617537 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 47617614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 12622677 - 12622847
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| ||| |  |||||||||||||| |||||||||||||||||    
T  12622677 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagggaaaaggatgagctact 12622776  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || |||||||| |||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  12622777 caaaaagaaggacgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 12622847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 5834524 - 5834347
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||| || |||| ||||  |  |||||||||||| |||||||||||||||||    
T  5834524 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 5834425  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  5834424 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 5834347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 3172920 - 3172743
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||| || |||| ||||  |  |||||||||||| |||||||||||||||||    
T  3172920 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 3172821  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||| ||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  3172820 taaaaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 3172743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 12731807 - 12731631
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  12731807 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12731708  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  12731707 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 12742400 - 12742224
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  12742400 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12742301  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  12742300 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12742224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 153158 - 153326
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||| ||||||||  ||||| |||| ||||| |||| |||||| ||||| ||| |||||| |||| |||| | |||| |||||    
T  153158 cactcctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaagaatgaacaacttcagaag 153257  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||    
T  153258 aaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 19130112 - 19129938
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19130112 tggacatcactcctttctatccagaagaagagtacattacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctact 19130013  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccca 184  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  19130012 taagaagaaggatcagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 19129938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 26112642 - 26112451
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  26112642 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 26112543  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttgtttt 202  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  26112542 taagcagaaggatgaacaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc-attttttttgcttgtttt 26112451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 15766081 - 15766258
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||| ||||||||||    
T  15766081 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaagaatgagctact 15766180  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  15766181 ttagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 15766258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 15790218 - 15790395
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||| |||||||||||||||||    
T  15790218 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 15790317  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| |  || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  15790318 ttagaagaaggatgatcggatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 15790395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 36294285 - 36294108
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| ||||||||||||||||||||||||||||    
T  36294285 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagagaaaaggatgagctact 36294186  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  36294185 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 36294108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 209087 - 209264
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  209087 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 209186  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  209187 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 209264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 243168 - 242991
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  243168 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 243069  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  243068 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 242991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 722710 - 722887
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  722710 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 722809  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  722810 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 722887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 796538 - 796361
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  796538 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 796439  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  796438 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 796361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 3358139 - 3358316
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  3358139 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 3358238  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  3358239 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 3358316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 9342490 - 9342313
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  9342490 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 9342391  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  9342390 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 9342313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 29078066 - 29077889
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  29078066 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 29077967  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  29077966 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 29077889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 32087203 - 32087380
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | ||||||||||||||| |||||||||||||||||    
T  32087203 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 32087302  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  32087303 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 32087380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 13687498 - 13687675
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  13687498 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 13687597  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  13687598 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 13687675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 36079290 - 36079113
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  36079290 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 36079191  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  36079190 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 36079113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 6152462 - 6152292
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| |||||||||||||||||    
T  6152462 tggacatcactcctttctatcgagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctact 6152363  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || |||||| |||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  6152362 caaaaagaagaatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 6152292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 19226296 - 19226134
Alignment:
Q  19 ctcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaa 118  Q
    ||||||||||||||||||| || ||||   |||||||||  ||||| || | |||| | ||||||||| |||||| | || | || | |||| |||||||    
T  19226296 ctcctttctatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgagagcacagaaagaacaacttcagaagaa 19226197  T
Q  119 ggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacac 181  Q
    ||||||||| ||||| || || ||||||||||||| ||||| |||| ||||||||||||||||    
T  19226196 ggatgagcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 19226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 30324171 - 30324333
Alignment:
Q  19 ctcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaa 118  Q
    ||||||| ||||||||||| || ||||   |||||||||  ||||| || | |||| | ||||||||| |||||| | ||  ||| | |||| |||||||    
T  30324171 ctcctttttatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagagtgagagcacagactgaacaacttcagaagaa 30324270  T
Q  119 ggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacac 181  Q
    ||||||||| ||||| || |||||||||||||||| ||||| |||| ||||||||||||||||    
T  30324271 ggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 30324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 44482503 - 44482387
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||  ||| ||||  ||| || |   | ||||| ||||| || |||||    
T  44482503 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 44482404  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  44482403 tcagaagaaggatgagc 44482387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 44482396 - 44482305
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  44482396 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagctgaagaagcaagcccaaccttagttgcacacccaact 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 9e-79; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 12 - 270
Target Start/End: Original strand, 40469482 - 40469745
Alignment:
Q  12 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctactta 111  Q
    |||| |||||| ||||||| ||||||||||||||| ||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||     
T  40469482 gacaacactcccttctatctagaagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttc 40469581  T
Q  112 agaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaactttctttgcttg-----tttttgtt 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| | ||| ||||||||     ||||||||    
T  40469582 agaagaaggatgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccc-attttttttgcttgtttaatttttgtt 40469680  T
Q  207 ctaagt-tgttagtagctttgcctttgtatcttgacttatctatataaatattatctctgcttct 270  Q
    |||| | | ||||||||||||||||||||||||||||| ||| ||||||| |||||  |||||||    
T  40469681 ctaaatattttagtagctttgcctttgtatcttgacttgtctttataaatgttatcattgcttct 40469745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 24026926 - 24027100
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  24026926 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 24027025  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacaccca 184  Q
     |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  24027026 caagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 24027100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 17919466 - 17919294
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  17919466 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 17919367  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
     |||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||    
T  17919366 caagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagaaagcccaaccttagttgcacacc 17919294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 19953843 - 19954036
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||||| || |||||||||||||||||    
T  19953843 tggacatcactcctttctacccagaagaatagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaataagggaaaaggatgagctact 19953942  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact-ttctttgcttgtttt 202  Q
     |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||  | |||||||||||||||    
T  19953943 caagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagtccaaccttagttgcacacccatttattctttgcttgtttt 19954036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 55754716 - 55754893
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||||||||||||||||||||||||||||||||    
T  55754716 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 55754815  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  55754816 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 55754893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 10750056 - 10750233
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  10750056 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 10750155  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| ||| |||||||||||||||||||||||||||||||||    
T  10750156 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaact 10750233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 10963825 - 10964002
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  10963825 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 10963924  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||| ||| |||||||||||||||||||||||||||||||||    
T  10963925 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaact 10964002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 18761969 - 18762146
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  18761969 tggacatcactcctttctatccagaagaggaatacatcacatgggctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 18762068  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| ||||| ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  18762069 taagaagaaagatgaacaaatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 18762146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 24641667 - 24641490
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  24641667 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 24641568  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  24641567 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 24641490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 36019687 - 36019510
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| | |||| |||||||||| |||||||||||||||||    
T  36019687 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 36019588  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | ||||||||||||| || || ||||| || || |||||  |||||||||||||||||||||||||||||||||||||    
T  36019587 tcagaagaaggatgatcagatcaagtatctcttagaacaattgtataagcaagcccaaccttagttgcacacccaact 36019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 16257282 - 16257112
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||| |||||  ||||||||| |||| ||||| |||||||||||    
T  16257282 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 16257183  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcaca 180  Q
     || ||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  16257182 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 16257112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 21997768 - 21997592
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| | | | || |||||||||||||||||    
T  21997768 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgttgggcataaaaggaaattaagggaaaaggatgagctact 21997669  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  21997668 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 21997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 27658000 - 27657823
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||| || |||| ||||  |  |||||||||||| |||||||||||||||||    
T  27658000 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 27657901  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||| ||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  27657900 taaaaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 27657823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 451928 - 451752
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  451928 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 451829  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  451828 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 451752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 30935979 - 30936155
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| | | | || |||||||||||||||||    
T  30935979 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 30936078  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaac 186  Q
    | ||||||| ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||    
T  30936079 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 30936155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 16306448 - 16306388
Alignment:
Q  122 tgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 182  Q
    |||||| |||||||||||  |||||||  ||| ||||| |||| |||||||||||||||||    
T  16306448 tgagcagattaagtacctaatggaacaagtgtctaagctagccaaaccttagttgcacacc 16306388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 32489 - 32312
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||| |||||| |||||||||| |||||||||||||||||    
T  32489 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 32390  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    | | ||||||||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  32389 tcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaact 32312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 46482 - 46659
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||  |  |||||||||||| |||||||||||||||||    
T  46482 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 46581  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||| ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||    
T  46582 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaact 46659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 52481 - 52649
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||| ||||||||  ||||| |||| ||||| |||| |||||| ||||| ||| |||||| ||||||||| | |||| |||||    
T  52481 cactcctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaag 52580  T
Q  117 aaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||||||||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||    
T  52581 aaggatgagcaaattaagtatctattggaacagatgtataagcaagtcaaaccttagttgcacacccaa 52649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 3424 - 3599
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    |||| |||||||| ||||| ||||| ||||| ||||||||||| ||||||||||| |||| ||||  ||| |||| | | || |||||||||||||||||    
T  3424 tggatatcactcccttctacccagaggaagaatacatcacaagagctgcaagaattcatgctgggcataagagaaaattaagggaaaaggatgagctact 3523  T
Q  110 taagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    | ||||||||||||| || || |  || || || || ||| |||||||||||||||||||||||||||||||||||    
T  3524 tcagaagaaggatgatcagatcagatatctcttagagcagttgtataagcaagcccaaccttagttgcacacccaa 3599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 3629 - 3556
Alignment:
Q  12 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaag 85  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  3629 gacatcactcctttctatccagaagaagagtacatcacaagagctgcaagaatacatgctgggtttaaaagaag 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 3250 - 3416
Alignment:
Q  19 ctcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaa 118  Q
    ||||||| ||||||||||| || |||||  |||| ||||  ||||| || | |||| | ||||||||| | |||| | || |||| | |||| |||||||    
T  3250 ctcctttttatccagaagatgattacatttcaagagctgatagaattcaagctgggctgaaaagaagactaagagcacagaatgaacaacttcagaagaa 3349  T
Q  119 ggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    ||||||||| ||||| || || ||||||||||||||||||| |||| ||||||||||||||||||||    
T  3350 ggatgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 3416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 11593 - 11671
Alignment:
Q  107 acttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||| |||||||||||||||| ||||| || || ||||||||||||||||||| |||| ||||||||||||||||||||    
T  11593 acttcagaagaaggatgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 11671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 2863 - 2952
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||| | |||| |||||||||||||||| ||||| || ||  |||||||||||| ||||| |||| ||||||||||||||||||||    
T  2863 aaggatgaacaacttcagaagaaggatgagcagattaaatatctactggaacagatgtctaagctagccaaaccttagttgcacacccaa 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 2763 - 2870
Alignment:
Q  17 cactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaag 116  Q
    ||||||||||||||||||||| || ||||   |||||||||  ||||| || | |||| | ||||||||| ||| || |||| |||| | |||| |||||    
T  2763 cactcctttctatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgaaagcaaagaatgatcaacttcagaag 2862  T
Q  117 aaggatga 124  Q
    ||||||||    
T  2863 aaggatga 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 23825 - 23758
Alignment:
Q  114 aagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacac 181  Q
    |||||||||||||| ||||| || |||||||||||||||| ||||| |||| ||||||||||||||||    
T  23825 aagaaggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 23758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 2642 - 2526
Alignment:
Q  10 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgttgggtttaaaagaagaatgagagaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||  ||| ||||  ||| || |   | ||||| ||||| || |||||    
T  2642 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 2543  T
Q  110 taagaagaaggatgagc 126  Q
    | |||||||||||||||    
T  2542 tcagaagaaggatgagc 2526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 2535 - 2444
Alignment:
Q  96 aaggatgagctacttaagaagaaggatgagcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaact 187  Q
    ||||||||||||||| ||||||||||||| || ||||     || || |||||| || | ||||||||||||||||||||||||||||||||    
T  2535 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaact 2444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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