View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12619_high_4 (Length: 226)
Name: NF12619_high_4
Description: NF12619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12619_high_4 |
 | |
|
| [»] scaffold0162 (1 HSPs) |
| | |
|
| [»] scaffold0012 (2 HSPs) |
| | |
|
| [»] scaffold0132 (1 HSPs) |
| | |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0686 (1 HSPs) |
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|
| [»] scaffold0342 (1 HSPs) |
| | |
|
| [»] scaffold0124 (1 HSPs) |
| | |
|
| [»] scaffold0158 (1 HSPs) |
| | |
|
| [»] scaffold0833 (1 HSPs) |
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| [»] scaffold0075 (1 HSPs) |
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| [»] scaffold0066 (1 HSPs) |
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| [»] scaffold0125 (1 HSPs) |
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| [»] scaffold0361 (1 HSPs) |
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| [»] scaffold1427 (1 HSPs) |
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| [»] scaffold0138 (2 HSPs) |
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| [»] scaffold0244 (1 HSPs) |
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| [»] scaffold0057 (1 HSPs) |
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| [»] scaffold0561 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 23985481 - 23985697
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23985481 |
ttttgtatgactatatggaagtatatgattgatagttgagaattgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
23985580 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23985581 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
23985680 |
T |
|
| Q |
201 |
tgaattgttggtgatgt |
217 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
23985681 |
tgaattgttggtgatgt |
23985697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 25003940 - 25003729
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25003940 |
ttttgtatgtctatatggaagtatttgattgatagttgagtattgaatgtgatgtttatcttaaggtgacgtattttcctctttacttggaatgtgagca |
25003841 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||| | | |||||||| ||||||| ||||||||||| |
|
|
| T |
25003840 |
aatcatgtatttgatatgaaattacgtgaaggtgatgatattggtgaatccat--atacattgtttgttatgatatggtgggtgaatatatatgttgttg |
25003743 |
T |
|
| Q |
201 |
tgaattgttggtga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
25003742 |
tgaattgttggtga |
25003729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34938514 - 34938303
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
34938514 |
ttttgtatgactatatggaagtatttgattgttagttgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtgggca |
34938415 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||| ||||||||||| |
|
|
| T |
34938414 |
aatcatgtatttgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatgttgttg |
34938317 |
T |
|
| Q |
201 |
tgaattgttggtga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
34938316 |
tgaattgttggtga |
34938303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 29191285 - 29191487
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| | |||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| || || ||| |
|
|
| T |
29191285 |
ttttgtatgactatatggaagtatttgatggttagttgagtattgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttgaaaagtaggca |
29191384 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| ||||||||||| |
|
|
| T |
29191385 |
aatcatgtatttgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atatattgtttattatgatatggtgggtgaatatatatgttgttg |
29191482 |
T |
|
| Q |
201 |
tgaat |
205 |
Q |
| |
|
||||| |
|
|
| T |
29191483 |
tgaat |
29191487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 2030904 - 2030714
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
2030904 |
ttttgtatgactatatggaagtattggattgatagttgaatatggaatgagatgtttatcttaaggtgacgtattatcctctttacttggaatgtgagca |
2030805 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||| |||| |
|
|
| T |
2030804 |
aatcatgtaattgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatat |
2030714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23112168 - 23112371
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
23112168 |
ttttgtatgactatatggaagtatttgattgatagatgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtgagca |
23112267 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgat-attggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgtt |
199 |
Q |
| |
|
|||||| ||| |||| |||| |||||| ||||||||||| |||||||||| ||| || ||||||||| | |||||||| ||||||| |||||||||| |
|
|
| T |
23112268 |
aatcatatatctgatgtgaaattatgtaaaggtgatgataattggtgaatacat--ctacattgtttattatgatatggtgggtgaatatatatgttgtt |
23112365 |
T |
|
| Q |
200 |
gtgaat |
205 |
Q |
| |
|
|||||| |
|
|
| T |
23112366 |
gtgaat |
23112371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 32950069 - 32949943
Alignment:
| Q |
2 |
tttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaa |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||| || |||| |||||| || ||| |||| ||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
32950069 |
tttgtatgactatatggaagtacttgattattaattgaatgttgaatgagaagtt-atctcaaggtgatgtactttcctttttacttggaatgtgagcaa |
32949971 |
T |
|
| Q |
102 |
atcatgtatttgatatgaagttatgtgaa |
130 |
Q |
| |
|
||||||||||||||||||| ||||||||| |
|
|
| T |
32949970 |
atcatgtatttgatatgaa-ttatgtgaa |
32949943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 23414222 - 23414167
Alignment:
| Q |
43 |
ctgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
|||||| |||||||||| ||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
23414222 |
ctgaatatgatgtttattataaggtgttgtattttctcctttacttggaatgtgag |
23414167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 16836509 - 16836593
Alignment:
| Q |
50 |
tgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgat |
136 |
Q |
| |
|
||||||| ||| ||||||| ||||||| ||||||||||||||||||| | || ||||||| ||||||| | |||||||||| |||| |
|
|
| T |
16836509 |
tgatgttcatcataaggtgttgtattt-cctctttacttggaatgtgggaaattcatgta-ttgatattgaattatgtgaagatgat |
16836593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 139; Significance: 7e-73; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 35010415 - 35010626
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
35010415 |
ttttgtatgactatatggaagtatttgattgttagttgagttttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtgagca |
35010514 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
||||||||||||||| |||| |||||||||||| ||||||||||||||||||| ||| ||||||||| | |||||||||||||||| |||| |||||| |
|
|
| T |
35010515 |
aatcatgtatttgatgtgaaattatgtgaaggtaatgatattggtgaatccat--atacattgtttattatgatatggtgagtgaatatatatcttgttg |
35010612 |
T |
|
| Q |
201 |
tgaattgttggtga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
35010613 |
tgaattgttggtga |
35010626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 27740075 - 27739868
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
27740075 |
ttttgtatgactatatggaagtaatggattgatagttgagtattgaatgtgatgtttatcttaaggtgacatattttcctctttatttggaatgtgagca |
27739976 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||||| ||||||| ||||| ||||| |
|
|
| T |
27739975 |
aatcatgtatttgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atacattgtttattataatatggtgggtgaatatatatgatgttg |
27739878 |
T |
|
| Q |
201 |
tgaattgttg |
210 |
Q |
| |
|
|||||||||| |
|
|
| T |
27739877 |
tgaattgttg |
27739868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 14627151 - 14627353
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||| |||| ||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| || ||| |
|
|
| T |
14627151 |
ttttgaatgattatatggaagtatttgattgttagttgagtgttgaatgtaatgtttatcttaaggtgatgtattttcctcttgacttggaaagtaggca |
14627250 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| ||||||||||| |
|
|
| T |
14627251 |
aatcatgtatttgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atatattgtttattatgatatggtgggtgaatatatatgttgttg |
14627348 |
T |
|
| Q |
201 |
tgaat |
205 |
Q |
| |
|
||||| |
|
|
| T |
14627349 |
tgaat |
14627353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14151540 - 14151330
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14151540 |
ttttgtatgactatatggaagtatttgaatgatagttaagtgtggaatgtgatgtttatcttaaggtgatgtattttcctctttgcttggaatgtgagca |
14151441 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
||||||||||||||| || | |||||||||| |||||||||||||||||| | |||| ||||||||| | ||||| | ||||||| ||||||||||| |
|
|
| T |
14151440 |
aatcatgtatttgatgtggaattatgtgaagatgatgatattggtgaatc--tacatacattgtttatgatgatatgattggtgaatatatatgttgttg |
14151343 |
T |
|
| Q |
201 |
tgaattgttggtg |
213 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14151342 |
agaattgttggtg |
14151330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 222186 - 221983
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgta-ttttcctctttacttggaatgtgagc |
99 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||| | |
|
|
| T |
222186 |
ttttgtatgactatatggaagtatttgattgttagttgagtgttgaatgtgatgtttatcttaaggtgatgtatttttcctcttgacttggaaagtggac |
222087 |
T |
|
| Q |
100 |
aaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgtt |
199 |
Q |
| |
|
||||||| ||| |||| |||| |||||| ||||||||||| ||||||||||||| ||| ||||||||| | |||||||| ||||||| |||||||||| |
|
|
| T |
222086 |
aaatcatatatctgatgtgaaattatgtaaaggtgatgatgttggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatgttgtt |
221989 |
T |
|
| Q |
200 |
gtgaat |
205 |
Q |
| |
|
|||||| |
|
|
| T |
221988 |
gtgaat |
221983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 16301184 - 16301286
Alignment:
| Q |
45 |
gaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattgg |
144 |
Q |
| |
|
||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |
|
|
| T |
16301184 |
gaatgtgatgtttatcttaagatgacgtatcttcctctttacttggaatgtgagcaaatcatgtaattgatgtgaaattatgtgaaggtgatgatattgg |
16301283 |
T |
|
| Q |
145 |
tga |
147 |
Q |
| |
|
||| |
|
|
| T |
16301284 |
tga |
16301286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 1555077 - 1554888
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||| |||||| || ||| |||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1555077 |
ttttgtatgactatatggaagtacttgattattaattgaatgttgaatgagaagtt-atctcaaggtgatgtattttcctttttacttggaatgtgagca |
1554979 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
||||||||| |||| |||| |||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||| ||||||| |||| |
|
|
| T |
1554978 |
aatcatgtaagtgatgtgaaattatgtgaaggtgatgattttggtgaatccat--atacattgtttattatgatatggtgggtgaatatatat |
1554888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 29665183 - 29665087
Alignment:
| Q |
56 |
ttatcttaaggtgatgtatt-ttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatcca |
152 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| || ||| |||| | |||||||||||||| |||| |
|
|
| T |
29665183 |
ttatctcaaggtgatgtattcttcctttttacttggaatgtgagcaaatcatgtatttgatatcaa-ttacatgaatgagatgatattggtgagtcca |
29665087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 1651111 - 1651164
Alignment:
| Q |
3 |
ttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtt |
56 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| | ||||| ||||||| |
|
|
| T |
1651111 |
ttgtatgactatatggaagtatttgattgttagttgagtattgaatatgatgtt |
1651164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1658869 - 1658928
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatc |
60 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| |||| ||||| ||||||||||| |
|
|
| T |
1658869 |
ttttgtatgactatatggaagtatttgattgttaggtgagtgttgaatatgatgtttatc |
1658928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 22463303 - 22463358
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcct-ctttacttggaatgtgag |
98 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
22463303 |
tgaatatgatgtttatcataaggtgttgtattttcctcctttacttggattgtgag |
22463358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 22594519 - 22594607
Alignment:
| Q |
50 |
tgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgata |
140 |
Q |
| |
|
||||||| ||| ||||||| ||||||| ||||||||||||||||||| | || ||||||| ||||||| | |||||||||| ||||||| |
|
|
| T |
22594519 |
tgatgttcatcataaggtgttgtattt-cctctttacttggaatgtgggaaattcatgta-ttgatattgaattatgtgaagaagatgata |
22594607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15861720 - 15861683
Alignment:
| Q |
3 |
ttgtatgactatatggaagtatatgattgatagttgag |
40 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
15861720 |
ttgtatgactatatggaagtatttgattgttagttgag |
15861683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 47482040 - 47482253
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
47482040 |
ttttgtatgactatatggaagtatttgactgatagttgaatatggaatgtgatgtttatcttaaggtgacgtatttccctctttacttggaatgtgagca |
47482139 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgt |
198 |
Q |
| |
|
||||||||||||||| |||| |||| |||| |||||||||||||||||||||| ||||||||||||| | |||||||| |||| ||| ||||||||| |
|
|
| T |
47482140 |
aatcatgtatttgatgtgaaattatatgaatgtgatgatattggtgaatccat--atatattgtttattatgatatggtgggtgaatatatatatgttgt |
47482237 |
T |
|
| Q |
199 |
tgtgaattgttggtga |
214 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
47482238 |
tgtgaattgttggtga |
47482253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 13320319 - 13320168
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
13320319 |
ttttgtatgactatatggaagtatttgattgatagtcgagtgtcgaatgtgatgtttatcttaaggtgacgtatttttctctttacttggaatgtgagca |
13320220 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | |||||||||||||| ||||| |
|
|
| T |
13320219 |
aatcatgtatttgatatgaa-ttatgtgaatgagatgatattggtgagtccat |
13320168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 7285610 - 7285780
Alignment:
| Q |
45 |
gaatgtgatgtttatcttaaggtgatgt-attttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattg |
143 |
Q |
| |
|
||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||| |
|
|
| T |
7285610 |
gaatgtgatgtttatcttaagatgacgttatcttcctctttacttggaatgtgagcaaatcatgtgtttgatgtgaaattatgtgaaggtgatgatattg |
7285709 |
T |
|
| Q |
144 |
gtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgttgtgaattgttggtga |
214 |
Q |
| |
|
||| || ||| ||| ||||||||| | |||||||| |||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
7285710 |
gtggattcat--atacattgtttattatgatatggtgggtgaatatatatatgatgttgtgaattgttggtga |
7285780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 15761298 - 15761487
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||| |||||| || ||| |||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15761298 |
ttttgtatgactatatggaagtacttgattattaattgaatgttgaatgagaagtt-atctcaaggtgatgtattttcctttttacttggaatgtgagca |
15761396 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
||||||||| |||| |||| |||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||| ||||||| |||| |
|
|
| T |
15761397 |
aatcatgtaagtgatgtgaaattatgtgaaggtgatgattttggtgaatccat--atacattgtttattatgatatggtgggtgaatatatat |
15761487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16479988 - 16480047
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatc |
60 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||| |
|
|
| T |
16479988 |
ttttgtatgactatatggaagtatttgattgttagttgagtgttgaatatgatgtttatc |
16480047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 14276139 - 14276233
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgata |
140 |
Q |
| |
|
||||| ||||||||||| ||||||| |||| |||| ||||||||||||||||| | || ||||||| ||||||| | |||||||||| ||||||| |
|
|
| T |
14276139 |
tgaatatgatgtttatcataaggtgttgta-tttcatctttacttggaatgtggggaactcatgta-ttgatattgaattatgtgaagaagatgata |
14276233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 13617822 - 13617767
Alignment:
| Q |
43 |
ctgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
|||||| |||||||||| ||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
13617822 |
ctgaatatgatgtttattataaggtgttgtattttctcctttacttggaatgtgag |
13617767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 9195 - 9408
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9195 |
ttttgtatgactatatggaagtatttgattgatagttgagtgtcgaatgtgatgtttatcttaaggtgacgtattttcctctttacttggaatgtgagca |
9294 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgt |
198 |
Q |
| |
|
||||||| | || || |||| |||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||| |||| ||| ||||| ||| |
|
|
| T |
9295 |
aatcatgaaattaatgtgaaattatgtgaaggtgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatatgatgt |
9392 |
T |
|
| Q |
199 |
tgtgaattgttggtga |
214 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
9393 |
tgtgaattgttggtga |
9408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 223192 - 223394
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
223192 |
ttttgtatgactatatggaagtatttgattgttagttgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtgggca |
223291 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
|||||| ||| |||| |||| |||||| ||||||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||| ||||||||||| |
|
|
| T |
223292 |
aatcatatatctgatgtgaaattatgtaaaggtgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatgttgttg |
223389 |
T |
|
| Q |
201 |
tgaat |
205 |
Q |
| |
|
||||| |
|
|
| T |
223390 |
tgaat |
223394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 35078 - 35126
Alignment:
| Q |
105 |
atgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
||||| |||||| ||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
35078 |
atgtaattgataggaaattatgagaaggtgatgatattggtgaatccat |
35126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 12874 - 12661
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
12874 |
ttttgtatgattatatggaagtattggattgatagttgaatacggaatgagatgtttatcttaaggtgacgtattttcctctttacttagaatgtgagca |
12775 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgt |
198 |
Q |
| |
|
||||||||| ||||| |||| ||||||| |||||||||||||||||||||||| ||| ||||||||| | |||||||| |||| ||| ||||| ||| |
|
|
| T |
12774 |
aatcatgtaattgatgtgaaattatgtgcaggtgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatatgatgt |
12677 |
T |
|
| Q |
199 |
tgtgaattgttggtga |
214 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
12676 |
tgtgaattgttggtga |
12661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 6e-58; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 32465008 - 32464818
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32465008 |
ttttgtatgactatatggaagtatttgattgacagttgagtattgaatatgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
32464909 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
||||||||| ||||| |||| ||||||||| ||||||||||||||||||||| |||| |||||||| | |||||||| |||||| |||| |
|
|
| T |
32464908 |
aatcatgtaattgatgtgaaattatgtgaaattgatgatattggtgaatccat--atatgttgtttattatgatatggtggatgaatatatat |
32464818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7512961 - 7513043
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctt |
83 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
7512961 |
ttttgtatgactatatggaagtatttgattgttagttgagtgttgaatgtgatgtttatcttaaagtgatgtcttttcctctt |
7513043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 24561949 - 24562003
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
24561949 |
tgaatatgatgtttatcataaggtgttgtattttctcctttacttggattgtgag |
24562003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 25133181 - 25133133
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcct-ctttacttgga |
91 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
25133181 |
tgaatgtgatgtttatcacaaggtgttgtattttcctcctttacttgga |
25133133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 25266477 - 25266524
Alignment:
| Q |
105 |
atgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||||||||||| ||||| |
|
|
| T |
25266477 |
atgtatttgatatgaa-ttatgtgaatgagatgatattggtgagtccat |
25266524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 18738865 - 18738653
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18738865 |
ttttttatgactatatggaagtatttgattgatagttgagtgttcaatgtgatgtttatcttaaggtgacgtattttcctctttacttggaatgtgagca |
18738766 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgt |
198 |
Q |
| |
|
||||||||| ||||| |||| ||||||| |||||||||||||||||||||||| ||| ||| |||| | ||||||||| |||| ||| ||||| ||| |
|
|
| T |
18738765 |
aatcatgtaattgatgtgaaattatgtggaggtgatgatattggtgaatccat--atactttg-ttattataatatggtgggtgaatatatatatgatgt |
18738669 |
T |
|
| Q |
199 |
tgtgaattgttggtga |
214 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
18738668 |
tgtgagttgttggtga |
18738653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 51962305 - 51962457
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| | || ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
51962305 |
ttttgtatgactatatggaagtattggattgatagttgaatatggattgtgacgtttatcttaaggtgacgtattttcctctttacttggaatgtgagca |
51962404 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
51962405 |
aatcatgtaattgatgtgaaattatgtgaaggtgatgatattggtgaatccat |
51962457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 54039731 - 54039896
Alignment:
| Q |
47 |
atgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtg |
146 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
54039731 |
atgtgatgtttatcttaaggtgacatattttcctctttacttggaatgtgagcaaatcatgtatttgatgtgaaactatatgaaggtgatgatattggtg |
54039830 |
T |
|
| Q |
147 |
aatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttgtgaattgttggtga |
214 |
Q |
| |
|
||||||| ||| ||||||||| | ||| |||| ||||||| |||||| |||||||||||||||||| |
|
|
| T |
54039831 |
aatccat--atacattgtttattatgatagggtgtgtgaatatatatgtcgttgtgaattgttggtga |
54039896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 23174731 - 23174534
Alignment:
| Q |
7 |
atgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagc-aaatca |
105 |
Q |
| |
|
|||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||||| ||| || |||||| |
|
|
| T |
23174731 |
atgactatatggaagtatttaattgatagatgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgatttggaaagtgggcaaaatca |
23174632 |
T |
|
| Q |
106 |
tgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttgtgaat |
205 |
Q |
| |
|
| ||| |||| |||| |||||| ||||||||||||||||||||||||| ||| |||||||| | |||||||| ||||||| |||||||||||||||| |
|
|
| T |
23174631 |
tatatctgatgtgaaattatgtaaaggtgatgatattggtgaatccat--atactttgtttattatgatatggtgggtgaatatatatgttgttgtgaat |
23174534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 18892967 - 18892814
Alignment:
| Q |
50 |
tgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaat |
149 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||| |||||||| || | |||||| ||||||||||||||||||||| |
|
|
| T |
18892967 |
tgatgttcatcttaaggtgatgtattttcctcttgacttggaaagtgggcaaatcatatatttgatgtgtaattatgtaaaggtgatgatattggtgaat |
18892868 |
T |
|
| Q |
150 |
ccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttgtgaat |
205 |
Q |
| |
|
|||| ||| ||||||||| | |||||||| ||||||| |||||||||||||||| |
|
|
| T |
18892867 |
ccat--atacattgtttattatgatatggtgggtgaatatatatgttgttgtgaat |
18892814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 17937229 - 17937102
Alignment:
| Q |
26 |
tgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttat |
125 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
17937229 |
tgattgatagttgagtgttgaatgtgatgttcatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatgtgaaattat |
17937130 |
T |
|
| Q |
126 |
gtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
| ||||||||||||||||| ||||| |
|
|
| T |
17937129 |
atattggtgatgatattggtgagtccat |
17937102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 18889741 - 18889587
Alignment:
| Q |
50 |
tgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtat-ttgatatgaagttatgtgaaggtgatgatattggtgaa |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||| ||| ||||||||| ||| ||| |||| |||||| |||||||||||||||||||| |
|
|
| T |
18889741 |
tgatgtttatcttaaggtgatgtattttccttttgacttggaaagtgggcaaatcatatatcaagatgtgaaattatgtaaaggtgatgatattggtgaa |
18889642 |
T |
|
| Q |
149 |
tccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttgtgaat |
205 |
Q |
| |
|
||||| ||| ||||||||| | ||| |||| ||||||| |||||||||||||||| |
|
|
| T |
18889641 |
tccat--atacattgtttattatgatacggtgggtgaatatatatgttgttgtgaat |
18889587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 11987363 - 11987483
Alignment:
| Q |
56 |
ttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgc |
155 |
Q |
| |
|
|||||| ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||| | ||| |
|
|
| T |
11987363 |
ttatctcaaggtgatgtattttcccttctacttggaatgtgaggaaatcatgtatttgatatgaa-ttatgtgaatgagatgatattggtgagttcat-- |
11987459 |
T |
|
| Q |
156 |
atatattgtttataacaatatggt |
179 |
Q |
| |
|
||| ||||||||| | |||||||| |
|
|
| T |
11987460 |
atacattgtttattataatatggt |
11987483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 9303921 - 9303976
Alignment:
| Q |
100 |
aaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgc |
155 |
Q |
| |
|
|||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
9303921 |
aaatcatgtaattgatatgaaattatgagaaggtgatgatattggtgaatccatgc |
9303976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 8603709 - 8603655
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
8603709 |
tgaatatgatgtttatcataaggtgttgtattttctcctttacttggattgtgag |
8603655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 15575039 - 15574986
Alignment:
| Q |
3 |
ttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtt |
56 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||| || | ||||| ||||||| |
|
|
| T |
15575039 |
ttgtatgactatatggaagtatttgattgttagttcagtattgaatatgatgtt |
15574986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 15614058 - 15614005
Alignment:
| Q |
3 |
ttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtt |
56 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||| || | ||||| ||||||| |
|
|
| T |
15614058 |
ttgtatgactatatggaagtatttgattgttagttcagtattgaatatgatgtt |
15614005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 11516683 - 11516731
Alignment:
| Q |
50 |
tgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
|||| |||||||||| |||||||||||| |||||||||||| |||||| |
|
|
| T |
11516683 |
tgatatttatcttaatatgatgtattttcttctttacttggattgtgag |
11516731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 110; Significance: 1e-55; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32650676 - 32650474
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||| ||| |
|
|
| T |
32650676 |
ttttgtatgactatatggaagtatttgattgatagatgagtgttgaatgtgatgtttatcttaaggtgatgtatttttctcttgacttggaaagtgggca |
32650577 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
|||||| ||| |||| |||| |||||| | ||||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||| ||||||||||| |
|
|
| T |
32650576 |
aatcatatatctgatgtgaaattatgtaagggtgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatgttgttg |
32650479 |
T |
|
| Q |
201 |
tgaat |
205 |
Q |
| |
|
||||| |
|
|
| T |
32650478 |
tgaat |
32650474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 20253127 - 20253073
Alignment:
| Q |
100 |
aaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatg |
154 |
Q |
| |
|
|||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
20253127 |
aaatcatgtaattgatatgaaattatgagaaggtgatgacattggtgaatccatg |
20253073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 20193095 - 20193043
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtg |
96 |
Q |
| |
|
||||| ||||||||||| ||||||| || |||||| |||||||||||||||| |
|
|
| T |
20193095 |
tgaatatgatgtttatcataaggtgttgcattttctcctttacttggaatgtg |
20193043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 167334 - 167486
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
167334 |
ttttgtatggctatatggaagtattggattgatagttgaatatggattgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
167433 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
167434 |
aatcatgtaattgatgtgaaattatgtgaaggtgatgatattggtgaatccat |
167486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0686 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0686
Description:
Target: scaffold0686; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 7132 - 7284
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
7132 |
ttttgtatgactatatggaagtattggattgatagttgaatatggattgtgatgtttatcttaaggtgacgtattttcctctttatttggaatgtgagca |
7231 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7232 |
aatcatgtaattgatgtgaaattatgtgaaggtgatgatattggtgaatccat |
7284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 102; Significance: 8e-51; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14911162 - 14910960
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
14911162 |
ttttgtatgactatatggaagtaattgattgatagatgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtgggca |
14911063 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
|||||| ||| |||| |||| |||||| |||||||||||||||||| ||| || ||| ||||||||| | || ||||| ||||||| ||||||||||| |
|
|
| T |
14911062 |
aatcatatatctgatgtgaaattatgtaaaggtgatgatattggtgtatcgat--atacattgtttattatgatttggtgggtgaatatatatgttgttg |
14910965 |
T |
|
| Q |
201 |
tgaat |
205 |
Q |
| |
|
||||| |
|
|
| T |
14910964 |
tgaat |
14910960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 55377879 - 55378025
Alignment:
| Q |
45 |
gaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattgg |
144 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
55377879 |
gaatgtgatgtttatcttaagatgacgtattttcctctttacttggaatgtgagcaaatcatgtatttgatgtgaaattatgtgaaggtgatgatattgg |
55377978 |
T |
|
| Q |
145 |
tgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
|| |||||| ||| ||| ||||| | |||||||| ||||||| |||| |
|
|
| T |
55377979 |
tggatccat--atacattatttattatgatatggtgggtgaatatatat |
55378025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 23271341 - 23271449
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattg |
143 |
Q |
| |
|
||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
23271341 |
tgaatgtgaggtttatctcaaggtgatgtactttcctctttacctggaatgtgagcaaatcatgtatttgatatgagattatgtgaagg-ggtgatattg |
23271439 |
T |
|
| Q |
144 |
gtgaatccat |
153 |
Q |
| |
|
|||||||||| |
|
|
| T |
23271440 |
gtgaatccat |
23271449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 7849200 - 7849123
Alignment:
| Q |
12 |
tatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttg |
89 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7849200 |
tatatagaagtatatgattgatagttgagtgttgacttagatgtttatcttaaggtgatgtattttcctctttgcttg |
7849123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 19019270 - 19019216
Alignment:
| Q |
100 |
aaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatg |
154 |
Q |
| |
|
|||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
19019270 |
aaatcatgtaattgatatgaaattatgagaaggtgatgatattggtgaatccatg |
19019216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 8044027 - 8043937
Alignment:
| Q |
124 |
atgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgttgtgaattgttggtga |
214 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| ||||||||| | || ||||| |||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
8044027 |
atgtggagatgatgatattggtgaatccat--atacattgtttattatgatgtggtgggtgaatatatatatgatgttgtgaattgttggtga |
8043937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0342 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0342
Description:
Target: scaffold0342; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 1815 - 1965
Alignment:
| Q |
2 |
tttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaa |
101 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
1815 |
tttgtatgactatatggaagtattggattgatagttgaatatggaatgtgatgtttatcttaaggtgacgtattttcctctttacttggaatgtaagcaa |
1914 |
T |
|
| Q |
102 |
atcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
||||||||||||||||||| ||||||||| | |||||||||||||| ||||| |
|
|
| T |
1915 |
atcatgtatttgatatgaa-ttatgtgaatgagatgatattggtgagtccat |
1965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 36414 - 36616
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
36414 |
ttttgtatgactatatgaaagtatttgattgatagatgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtgggca |
36513 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgttg |
200 |
Q |
| |
|
|||||| ||| | || |||| |||||| |||||||||||||||||| ||| || ||| ||||||||| | || ||||| ||||||| |||||||||| |
|
|
| T |
36514 |
aatcatatatctaatgtgaaattatgtaaaggtgatgatattggtgtatcgat--atacattgtttattatgatttggtgggtgaatatatatgttgtta |
36611 |
T |
|
| Q |
201 |
tgaat |
205 |
Q |
| |
|
||||| |
|
|
| T |
36612 |
tgaat |
36616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0158
Description:
Target: scaffold0158; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 23861 - 23720
Alignment:
| Q |
71 |
gtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataa |
170 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| | |
|
|
| T |
23861 |
gtattttcctctttacttggaatgtgagcaaatcatgtaattgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atacattgtttatta |
23764 |
T |
|
| Q |
171 |
caatatggtgagtgaatacatatgttgttgtgaattgttggtga |
214 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| ||||||| |
|
|
| T |
23763 |
tgatatggtgggtgaatatatatgttgttgtgaattattggtga |
23720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0833 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0833
Description:
Target: scaffold0833; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 2187 - 2018
Alignment:
| Q |
45 |
gaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattgg |
144 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
2187 |
gaatgtgatgtttatcttaaggtgacgtattttcttctctacttggaatgtgagcaaatcacgtatttgacgtgaaattatatgaaggtgatgatattgg |
2088 |
T |
|
| Q |
145 |
tgaatccatgcatatattgtttataacaatatggtgagtga----atacatatgttgttgtgaattgttggt |
212 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||| |||| ||| ||||||||||||||||||||||| |
|
|
| T |
2087 |
tgaatccat--atatattgtttattatgatatggtgggtgaatatatatatatgttgttgtgaattgttggt |
2018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 24217 - 24349
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||| |
|
|
| T |
24217 |
ttttgtatgactatatggaagtatttgatggttagttgactgttgaatgtgatgtttatcttaaggtgatgtattttcctcttgacttggaaagtaggca |
24316 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggt |
133 |
Q |
| |
|
||||||||||||||| | || |||||||||||| |
|
|
| T |
24317 |
aatcatgtatttgatgtaaaattatgtgaaggt |
24349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 18618380 - 18618191
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagca |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||| |||||| || ||| |||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18618380 |
ttttgtatgactatatggaagtacttgattattaattgaatgttgaatgagaagtt-atctcaaggtgatgtattttcctttttacttggaatgtgagca |
18618282 |
T |
|
| Q |
101 |
aatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
||||||||| |||| | || |||||||||||||||||| || |||||||||| ||| ||||||||| | |||||||| ||||||| |||| |
|
|
| T |
18618281 |
aatcatgtaagtgatgtcaaattatgtgaaggtgatgatttttgtgaatccat--atacattgtttattatgatatggtgggtgaatatatat |
18618191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 41508235 - 41508350
Alignment:
| Q |
74 |
ttttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaa |
173 |
Q |
| |
|
||||||||||||||||||||| || |||||||| | ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| | | |
|
|
| T |
41508235 |
ttttcctctttacttggaatg--agtaaatcatgcaattgatgtgaaattatgtgaaggtgatgatattggtgaatccat--atacattgtttattatga |
41508330 |
T |
|
| Q |
174 |
tatggtgagtgaatacatat |
193 |
Q |
| |
|
||||||| ||||||| |||| |
|
|
| T |
41508331 |
tatggtgggtgaatatatat |
41508350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 24548218 - 24548165
Alignment:
| Q |
3 |
ttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtt |
56 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| | ||||| ||||||| |
|
|
| T |
24548218 |
ttgtatgactatatggaagtatttgattgttagttgagtattgaatatgatgtt |
24548165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 17501015 - 17500921
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgata |
140 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||| | || ||||||| ||||||| | |||||||||| ||||||| |
|
|
| T |
17501015 |
tgaatatgatgtttatcataaggtgttgtattt-catctttacttggaatgtgggaaattcatgta-ttgatattgaattatgtgaagaagatgata |
17500921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 3845224 - 3845278
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
||||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||| |
|
|
| T |
3845224 |
tgaatatgatgtttatcctaatgtgatgtattttctcctttacttggattgtgag |
3845278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 19332695 - 19332749
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
||||| ||||||||||| ||| |||| |||||||| |||||||||||| |||||| |
|
|
| T |
19332695 |
tgaatatgatgtttatcataatgtgaagtattttcttctttacttggattgtgag |
19332749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 193
Target Start/End: Complemental strand, 53478 - 53332
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattg |
143 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| ||| |
|
|
| T |
53478 |
tgaatgtgatgtttatcttaaggtgatgt-ttctcctctttacttggaatgtgagcaaatcatgtaagtgatgtgaaattatgagaaggtgatgattttg |
53380 |
T |
|
| Q |
144 |
gtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat |
193 |
Q |
| |
|
| ||||||| ||| ||| ||||| | |||||||| ||||||| |||| |
|
|
| T |
53379 |
attaatccat--atacattctttattatgatatggtgggtgaatatatat |
53332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0125
Description:
Target: scaffold0125; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34746 - 34650
Alignment:
| Q |
1 |
ttttgtatgactatatggaagtatatgattgatagttgagaactgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
34746 |
ttttgtatgactatatggaagtatttgattgttagttgagtgttgaatgtgatgtttatcttaaggtgatgtattttcctc-ttacttggaatatgag |
34650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0361 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0361
Description:
Target: scaffold0361; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 2740 - 2644
Alignment:
| Q |
56 |
ttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccat |
153 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| | ||||||||||||| ||||| |
|
|
| T |
2740 |
ttatctcaaggtgatgtattttcctctttacttggaatgtgagtaaatcatgtatttgatatgaa-ttgtgtgaatgaaatgatattggtgagtccat |
2644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1427 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1427
Description:
Target: scaffold1427; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 1486 - 1382
Alignment:
| Q |
99 |
caaatcatgtatttgatatgaagttatgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatatgttgt |
198 |
Q |
| |
|
|||||||| ||| |||| |||| |||||| | |||||||||||||||| ||| || ||| ||||||||| | |||||||| ||||||| ||||||||| |
|
|
| T |
1486 |
caaatcatatatctgatgtgaaattatgtaagggtgatgatattggtgtatcgat--atacattgtttattatgatatggtgggtgaatatatatgttgt |
1389 |
T |
|
| Q |
199 |
tgtgaat |
205 |
Q |
| |
|
||||||| |
|
|
| T |
1388 |
tgtgaat |
1382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0138 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0138
Description:
Target: scaffold0138; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 28267 - 28177
Alignment:
| Q |
124 |
atgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat--gttgttgtgaattgttggtga |
214 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||| |||| ||||||||||||||||||||| |
|
|
| T |
28267 |
atgtggagatgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatatgttgttgtgaattgttggtga |
28177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 40263 - 40173
Alignment:
| Q |
124 |
atgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtgaatacatat--gttgttgtgaattgttggtga |
214 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||| |||| ||||||||||||||||||||| |
|
|
| T |
40263 |
atgtggagatgatgatattggtgaatccat--atacattgtttattatgatatggtgggtgaatatatatatgttgttgtgaattgttggtga |
40173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0244 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0244
Description:
Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 24210 - 24300
Alignment:
| Q |
124 |
atgtgaaggtgatgatattggtgaatccatgcatatattgtttataacaatatggtgagtga--atacatatgttgttgtgaattgttggtga |
214 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| ||||||||| | || ||||| |||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
24210 |
atgtggagatgatgatattggtgaatccat--atacattgtttattatgatgtggtgggtgaatatatatatgatgttgtgaattgttggtga |
24300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 4943 - 4889
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgag |
98 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
4943 |
tgaatatgatgtttatcataaggtgttgtattttctcctttacttggattgtgag |
4889 |
T |
|
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Target: scaffold0561 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0561
Description:
Target: scaffold0561; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 4003 - 4097
Alignment:
| Q |
44 |
tgaatgtgatgtttatcttaaggtgatgtattttcctctttacttggaatgtgagcaaatcatgtatttgatatgaagttatgtgaaggtgatgata |
140 |
Q |
| |
|
||||| ||||||| ||| ||||||| |||||| ||||||||||||||||||| | || ||||||| ||||||| | ||||||||| | ||||||| |
|
|
| T |
4003 |
tgaatatgatgttcatcataaggtgtggtattt-cctctttacttggaatgtgggaaattcatgta-ttgatattgaattatgtgaatgagatgata |
4097 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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