View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12619_low_7 (Length: 301)

Name: NF12619_low_7
Description: NF12619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12619_low_7
NF12619_low_7
[»] chr8 (30 HSPs)
chr8 (120-291)||(3417355-3417526)
chr8 (7-74)||(3417215-3417282)
chr8 (141-233)||(39205494-39205586)
chr8 (120-174)||(37732824-37732878)
chr8 (125-174)||(32414524-32414573)
chr8 (121-170)||(37064815-37064864)
chr8 (120-176)||(9197818-9197874)
chr8 (120-176)||(11686962-11687018)
chr8 (125-177)||(27441469-27441521)
chr8 (120-176)||(31602014-31602070)
chr8 (120-188)||(38576288-38576356)
chr8 (120-175)||(15198289-15198344)
chr8 (120-171)||(41974638-41974689)
chr8 (124-174)||(8372915-8372965)
chr8 (120-170)||(9197093-9197143)
chr8 (120-170)||(26652291-26652341)
chr8 (120-177)||(3043240-3043297)
chr8 (120-176)||(3043963-3044019)
chr8 (120-176)||(8373691-8373747)
chr8 (120-176)||(26654376-26654432)
chr8 (120-176)||(31641509-31641565)
chr8 (120-176)||(31642085-31642141)
chr8 (120-171)||(3165125-3165176)
chr8 (124-170)||(17724767-17724813)
chr8 (124-170)||(17725658-17725704)
chr8 (120-174)||(22320372-22320426)
chr8 (120-170)||(27442145-27442195)
chr8 (120-170)||(32979828-32979878)
chr8 (120-170)||(39778916-39778966)
chr8 (120-170)||(39779845-39779895)
[»] chr5 (29 HSPs)
chr5 (120-288)||(4084877-4085045)
chr5 (125-177)||(1554080-1554132)
chr5 (120-176)||(19128767-19128823)
chr5 (120-176)||(19360474-19360530)
chr5 (120-176)||(234698-234754)
chr5 (120-176)||(237819-237875)
chr5 (120-176)||(19359701-19359757)
chr5 (120-171)||(29046026-29046077)
chr5 (120-170)||(13306273-13306323)
chr5 (121-175)||(22799759-22799813)
chr5 (120-198)||(28705162-28705240)
chr5 (124-177)||(6476788-6476841)
chr5 (125-173)||(7632097-7632145)
chr5 (120-176)||(17071221-17071277)
chr5 (120-176)||(28705877-28705933)
chr5 (123-171)||(34709040-34709088)
chr5 (120-171)||(29087922-29087973)
chr5 (125-176)||(33471087-33471138)
chr5 (125-176)||(34600263-34600314)
chr5 (132-174)||(1283500-1283542)
chr5 (120-170)||(17071798-17071848)
chr5 (133-174)||(1281846-1281887)
chr5 (132-177)||(10554556-10554601)
chr5 (124-177)||(27364484-27364537)
chr5 (120-153)||(31081996-31082029)
chr5 (120-176)||(235589-235645)
chr5 (120-176)||(236927-236983)
chr5 (120-176)||(33005518-33005574)
chr5 (125-169)||(38056796-38056840)
[»] chr6 (17 HSPs)
chr6 (181-288)||(12345914-12346021)
chr6 (124-198)||(19323743-19323817)
chr6 (124-176)||(2512439-2512491)
chr6 (120-176)||(10171273-10171329)
chr6 (120-176)||(19653967-19654023)
chr6 (120-176)||(26529511-26529567)
chr6 (120-175)||(33435337-33435392)
chr6 (120-170)||(8489284-8489334)
chr6 (121-174)||(33436274-33436327)
chr6 (120-176)||(10171964-10172020)
chr6 (121-173)||(19311828-19311880)
chr6 (120-176)||(21133225-21133281)
chr6 (120-176)||(26528820-26528876)
chr6 (120-169)||(505534-505583)
chr6 (120-176)||(3623172-3623228)
chr6 (120-176)||(8488466-8488522)
chr6 (132-188)||(19322992-19323048)
[»] chr2 (28 HSPs)
chr2 (120-274)||(29559320-29559474)
chr2 (120-177)||(1296377-1296434)
chr2 (120-177)||(9276327-9276384)
chr2 (124-177)||(9540333-9540386)
chr2 (125-193)||(15774205-15774273)
chr2 (125-177)||(22301867-22301919)
chr2 (124-177)||(24933838-24933891)
chr2 (120-188)||(1297109-1297177)
chr2 (120-188)||(9275584-9275652)
chr2 (126-177)||(26752720-26752771)
chr2 (120-171)||(29512369-29512420)
chr2 (120-174)||(33512095-33512149)
chr2 (120-176)||(18174668-18174724)
chr2 (120-176)||(22560566-22560622)
chr2 (125-169)||(27177915-27177959)
chr2 (124-176)||(29719448-29719500)
chr2 (120-174)||(8541749-8541803)
chr2 (120-170)||(11751073-11751123)
chr2 (120-170)||(18174097-18174147)
chr2 (120-170)||(22301192-22301242)
chr2 (121-171)||(23343778-23343828)
chr2 (120-170)||(23857028-23857078)
chr2 (133-174)||(16692974-16693015)
chr2 (120-169)||(36237629-36237678)
chr2 (132-177)||(38361077-38361122)
chr2 (129-177)||(11007238-11007286)
chr2 (120-176)||(11750255-11750311)
chr2 (120-176)||(19918720-19918776)
[»] chr1 (29 HSPs)
chr1 (160-281)||(33504113-33504234)
chr1 (120-176)||(25469085-25469141)
chr1 (120-176)||(30663975-30664031)
chr1 (125-176)||(28181535-28181586)
chr1 (121-170)||(37852521-37852570)
chr1 (120-176)||(7406242-7406298)
chr1 (120-176)||(13262830-13262886)
chr1 (120-176)||(28182071-28182127)
chr1 (120-175)||(50271783-50271838)
chr1 (125-171)||(4439210-4439256)
chr1 (120-177)||(8987787-8987844)
chr1 (120-177)||(25671167-25671224)
chr1 (120-192)||(4135527-4135599)
chr1 (120-176)||(13263515-13263571)
chr1 (125-169)||(17171933-17171977)
chr1 (120-176)||(30663355-30663411)
chr1 (120-176)||(32038474-32038530)
chr1 (124-176)||(34309229-34309281)
chr1 (120-188)||(49680808-49680876)
chr1 (125-171)||(4433851-4433897)
chr1 (120-158)||(12760773-12760811)
chr1 (120-170)||(19172580-19172630)
chr1 (121-171)||(36389773-36389823)
chr1 (120-170)||(36390372-36390422)
chr1 (125-177)||(169625-169677)
chr1 (120-176)||(10121551-10121607)
chr1 (120-176)||(25468507-25468563)
chr1 (133-177)||(30931898-30931942)
chr1 (124-188)||(49681660-49681724)
[»] chr7 (39 HSPs)
chr7 (120-277)||(16664023-16664180)
chr7 (120-277)||(17638383-17638540)
chr7 (8-66)||(18829610-18829668)
chr7 (125-177)||(1417610-1417662)
chr7 (164-264)||(22319973-22320073)
chr7 (125-177)||(38225973-38226025)
chr7 (120-177)||(25343237-25343294)
chr7 (120-169)||(36378809-36378858)
chr7 (120-177)||(46428184-46428241)
chr7 (121-177)||(7668480-7668536)
chr7 (120-188)||(25342494-25342562)
chr7 (120-188)||(25343300-25343368)
chr7 (120-176)||(26636100-26636156)
chr7 (120-176)||(27948443-27948499)
chr7 (120-176)||(45099892-45099948)
chr7 (120-171)||(25599019-25599070)
chr7 (120-171)||(46428821-46428872)
chr7 (124-174)||(13785594-13785644)
chr7 (125-170)||(3029203-3029248)
chr7 (123-176)||(21496982-21497035)
chr7 (120-169)||(23889812-23889861)
chr7 (120-176)||(3772525-3772581)
chr7 (120-188)||(30660590-30660658)
chr7 (124-176)||(30661454-30661506)
chr7 (124-176)||(37949606-37949658)
chr7 (120-188)||(37950454-37950522)
chr7 (120-176)||(40273557-40273613)
chr7 (165-240)||(3163585-3163660)
chr7 (121-176)||(26636859-26636914)
chr7 (13-47)||(44472350-44472384)
chr7 (133-174)||(23901095-23901136)
chr7 (127-172)||(43065119-43065164)
chr7 (121-170)||(45099136-45099185)
chr7 (133-174)||(47719705-47719746)
chr7 (136-176)||(3027987-3028027)
chr7 (121-177)||(18977767-18977823)
chr7 (124-176)||(19067638-19067690)
chr7 (15-47)||(22022449-22022481)
chr7 (125-177)||(24389614-24389666)
[»] chr4 (30 HSPs)
chr4 (123-264)||(7842440-7842581)
chr4 (120-198)||(8247694-8247772)
chr4 (120-177)||(47785797-47785854)
chr4 (125-182)||(142517-142574)
chr4 (120-176)||(8248519-8248575)
chr4 (126-198)||(8265365-8265437)
chr4 (120-176)||(8266184-8266240)
chr4 (120-176)||(24374787-24374843)
chr4 (120-176)||(26147031-26147087)
chr4 (125-176)||(11938714-11938765)
chr4 (120-170)||(598523-598573)
chr4 (125-171)||(599305-599351)
chr4 (120-177)||(9365167-9365224)
chr4 (124-169)||(19080387-19080432)
chr4 (120-177)||(31329715-31329772)
chr4 (7-47)||(6508009-6508049)
chr4 (120-176)||(20774179-20774235)
chr4 (120-176)||(24158819-24158875)
chr4 (120-176)||(30573708-30573764)
chr4 (120-168)||(40495093-40495141)
chr4 (120-176)||(47688478-47688534)
chr4 (124-176)||(56262480-56262532)
chr4 (120-170)||(44792641-44792691)
chr4 (120-170)||(47687907-47687957)
chr4 (132-174)||(55976176-55976218)
chr4 (120-188)||(7841791-7841857)
chr4 (121-170)||(44469491-44469540)
chr4 (127-176)||(55001439-55001488)
chr4 (125-177)||(1866346-1866398)
chr4 (132-176)||(16903642-16903686)
[»] chr3 (35 HSPs)
chr3 (120-176)||(48648201-48648257)
chr3 (120-171)||(14871151-14871202)
chr3 (120-177)||(13477055-13477112)
chr3 (120-177)||(45081401-45081458)
chr3 (120-176)||(20213530-20213586)
chr3 (122-177)||(37520559-37520614)
chr3 (120-171)||(37988222-37988273)
chr3 (121-176)||(51827493-51827548)
chr3 (120-158)||(10847289-10847327)
chr3 (120-170)||(20212978-20213028)
chr3 (124-174)||(21727530-21727580)
chr3 (125-174)||(17603171-17603220)
chr3 (120-177)||(46150727-46150784)
chr3 (132-176)||(981677-981721)
chr3 (120-176)||(27082774-27082830)
chr3 (124-176)||(48507031-48507083)
chr3 (120-176)||(48764475-48764531)
chr3 (120-176)||(52266452-52266508)
chr3 (125-176)||(13349418-13349469)
chr3 (133-176)||(13477777-13477820)
chr3 (121-176)||(48765069-48765124)
chr3 (121-171)||(265102-265152)
chr3 (120-170)||(33276890-33276940)
chr3 (120-170)||(33277509-33277559)
chr3 (120-158)||(44029786-44029824)
chr3 (120-170)||(48413317-48413367)
chr3 (122-176)||(48649172-48649226)
chr3 (125-182)||(8949938-8949995)
chr3 (127-176)||(48506443-48506491)
chr3 (120-177)||(52281764-52281821)
chr3 (120-157)||(52605501-52605538)
chr3 (125-170)||(54458670-54458715)
chr3 (134-174)||(17603962-17604002)
chr3 (125-177)||(31974654-31974706)
chr3 (120-176)||(41458031-41458087)
[»] scaffold0002 (1 HSPs)
scaffold0002 (120-176)||(428900-428956)
[»] scaffold0176 (1 HSPs)
scaffold0176 (120-183)||(26589-26652)
[»] scaffold1207 (1 HSPs)
scaffold1207 (124-170)||(1588-1634)
[»] scaffold0418 (1 HSPs)
scaffold0418 (120-168)||(6891-6939)
[»] scaffold0085 (3 HSPs)
scaffold0085 (120-176)||(15020-15076)
scaffold0085 (133-177)||(15856-15900)
scaffold0085 (121-176)||(15080-15135)
[»] scaffold0504 (1 HSPs)
scaffold0504 (120-169)||(5385-5434)


Alignment Details
Target: chr8 (Bit Score: 156; Significance: 7e-83; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 120 - 291
Target Start/End: Original strand, 3417355 - 3417526
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccg 219  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3417355 gagtcaggatctgttgacatctggtgttaacgaattcgttgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 3417454  T
Q  220 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttcttc 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3417455 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttcttc 3417526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 3417215 - 3417282
Alignment:
Q  7 ctgtggacatccaaggctgaataatataaaaagacttgctacatacaaaagccattactcacaattac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3417215 ctgtggacatccaaggctgaataatataaaaagacttgctacatacaaaagccattactcacaattac 3417282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 39205494 - 39205586
Alignment:
Q  141 tggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaatt 233  Q
    |||||||||||||| ||| |||| ||||||| ||||| | |||||||| ||| ||||||||||||||| | |||||||||||||| |||||||    
T  39205494 tggtgtcaacgaatccgttgacatcaaatctcaaccatctattttatttaatcaaaggtctataatcgcttgttcaccgaataaacttaaatt 39205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 37732824 - 37732878
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||    
T  37732824 gagtcaggatccgttgacacctggtgtcaacggattcgttgacaccaaaacttaa 37732878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 32414573 - 32414524
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  32414573 aggatctgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 32414524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 37064815 - 37064864
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  37064815 agtcaggatctgttgacaccaggtgtcaacgaattcattgacaccaaatc 37064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 9197874 - 9197818
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| |||||||||  |||||||||||||||| ||||||||||| |||||    
T  9197874 gagtcaggatccgttgacaccaagtgtcaacgaattcgttgacaccaaatcctaacc 9197818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 11687018 - 11686962
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||| |||||| ||||    
T  11687018 gagttaggatccgttgacacctggtgtcaacgaattcgttgacactaaatctcaacc 11686962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 27441469 - 27441521
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| ||||||||||||||||| |||| |||||||||||||    
T  27441469 aggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatcttaacca 27441521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 31602014 - 31602070
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  31602014 gagttaggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 31602070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 38576356 - 38576288
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||| | ||||||||    
T  38576356 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 38576288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 15198344 - 15198289
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 175  Q
    |||||||||||  ||||||||||||||||||||||| || |||||||||| |||||    
T  15198344 gagtcaggatcctttgacacctggtgtcaacgaatttgttgacaccaaattttaac 15198289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 41974638 - 41974689
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  41974638 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 41974689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 8372915 - 8372965
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||| ||||    
T  8372915 caggatccgttgacacctggtgtcaacggattcgttgacaccaaatattaa 8372965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 9197093 - 9197143
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||    
T  9197093 gagtcagaatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 9197143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 26652291 - 26652341
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  26652291 gagtcaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 26652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 3043240 - 3043297
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||| |||||| ||||||||||||||||||| ||||| | ||||||||||| ||||||    
T  3043240 gagttaggatccgttgacacctggtgtcaacaaattcattgacaccaaatcctaacca 3043297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 3044019 - 3043963
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| || |||||| ||||||||||||||||| |||||||||| ||||||    
T  3044019 gagttaggatccgtcgacaccaggtgtcaacgaattcgttgacaccaaatgttaacc 3043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 8373747 - 8373691
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| |||||||||  ||||||||| |||||| |||||||||| ||||||    
T  8373747 gagtcaggatccgttgacaccaagtgtcaacggattcgttgacaccaaatattaacc 8373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 26654432 - 26654376
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||| |||| ||||||||| |||||||| | |||||| |||||||||||||||||    
T  26654432 gagtcaagatccgttgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 26654376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 31641509 - 31641565
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||| |||||||| | |||||| |||||||||||||||||    
T  31641509 gagtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 31641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 31642141 - 31642085
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||| | ||||||||||||||| |||||||||||| ||||    
T  31642141 gagtcaggatccattgacaccagatgtcaacgaattcgttgacaccaaatctcaacc 31642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 3165176 - 3165125
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||| | |||||||||| |||||| ||||||||||||    
T  3165176 gagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatct 3165125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 17724767 - 17724813
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||| |||||||||||||||||||  |||||| |||||||||||    
T  17724767 caggatcagttgacacctggtgtcaacagattcgttgacaccaaatc 17724813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 17725704 - 17725658
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  17725704 caggatccgttgacagcaggtgtcaacgaattcgttgacaccaaatc 17725658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 22320372 - 22320426
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||||||| |||||  || |||||||||| |||||| |||||||||||||||    
T  22320372 gagtcaggatccgttgatgccaggtgtcaacggattcgttgacaccaaatcttaa 22320426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 27442195 - 27442145
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||| ||||||||| ||||||||||||| |||  ||||||||||    
T  27442195 gagtcaggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 27442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 32979878 - 32979828
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||| ||||||||| |||||||||||||| ||  ||||||||||    
T  32979878 gagtcaggatccgttgacaccaggtgtcaacgaatttgttaacaccaaatc 32979828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 39778916 - 39778966
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||||    
T  39778916 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 39778966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 39779895 - 39779845
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||||    
T  39779895 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 39779845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 120 - 288
Target Start/End: Original strand, 4084877 - 4085045
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccg 219  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||    
T  4084877 gagtcaggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaaccattcattttattcaattaaaggtctataatcgctggttcaccg 4084976  T
Q  220 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttc 288  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4084977 aataaaattaaattgaaaacacagtattattgtactatttcttttcttctgcaaaatttgacgttcttc 4085045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 1554132 - 1554080
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1554132 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaacca 1554080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 19128767 - 19128823
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||    
T  19128767 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 19128823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 19360530 - 19360474
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  19360530 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatattaacc 19360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 234698 - 234754
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  234698 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaacc 234754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 237875 - 237819
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  237875 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaacc 237819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 19359701 - 19359757
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  19359701 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaacc 19359757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 29046026 - 29046077
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  29046026 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 29046077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 13306323 - 13306273
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  13306323 gagtcaggatccgttgacacctgatgtcaacgaattcgttgacatcaaatc 13306273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 22799813 - 22799759
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 175  Q
    |||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||    
T  22799813 agtcagaatccgttgacaccaggtgtcaatgaattcgttgacaccaaatcttaac 22799759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 28705162 - 28705240
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaagg 198  Q
    ||||||| ||| ||||||||| |||||||||| ||||||  ||||||||||| |||||| |||| |||| ||| |||||    
T  28705162 gagtcagtatccgttgacaccaggtgtcaacggattcgtttacaccaaatctcaaccagacattatatttaatcaaagg 28705240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 6476841 - 6476788
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||    
T  6476841 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacca 6476788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 7632097 - 7632145
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatctta 173  Q
    |||||| ||||||||| |||||||||| |||||| ||||||||||||||    
T  7632097 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctta 7632145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 17071221 - 17071277
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  17071221 gagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 17071277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 28705933 - 28705877
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||| |||||| ||||    
T  28705933 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaacc 28705877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 34709088 - 34709040
Alignment:
Q  123 tcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||||||||||||||| |||||||||| |||||| | ||||||||||    
T  34709088 tcaggatctgttgacaccaggtgtcaacggattcgttggcaccaaatct 34709040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 29087922 - 29087973
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||||| |||||||||| |||| | ||||||||||||    
T  29087922 gagtcaggatccgttgacaccaggtgtcaacggattcattgacaccaaatct 29087973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 33471138 - 33471087
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  33471138 aggatctgttgacaccacgtgtcaacgaattcgttgacaacaaatctcaacc 33471087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 34600263 - 34600314
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  34600263 aggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 34600314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 1283542 - 1283500
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||||| |||||||||| |||||| |||||||||||||||    
T  1283542 gttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 1283500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 17071848 - 17071798
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| |||||| ||||||||| ||||| ||||||||||| |||||||||||    
T  17071848 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 17071798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 1281846 - 1281887
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  1281846 ttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 1281887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 10554556 - 10554601
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||| |||||||||| |||||| |||||||||||| |||||    
T  10554556 gttgacaccaggtgtcaacggattcgttgacaccaaatctcaacca 10554601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 27364537 - 27364484
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||| ||||||||| |||||||| | |||||| |||||||||||| |||||    
T  27364537 caggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaacca 27364484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 31081996 - 31082029
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaa 153  Q
    ||||||||||| ||||||||||||||||||||||    
T  31081996 gagtcaggatccgttgacacctggtgtcaacgaa 31082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 235589 - 235645
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  235589 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 235645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 236983 - 236927
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  236983 gagttaggatccattgacaccaggtgtcaacggattcgtagacaccaaatctcaacc 236927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 33005518 - 33005574
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||| |||| |||||||||  ||||||| |||||||| ||||| |||||||||||    
T  33005518 gagtcatgatccgttgacaccaagtgtcaatgaattcgttgacacaaaatcttaacc 33005574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 38056796 - 38056840
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    |||||||||||||||| |||||||||| ||| || ||||||||||    
T  38056796 aggatctgttgacaccaggtgtcaacggattggttgacaccaaat 38056840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 12346021 - 12345914
Alignment:
Q  181 attttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttga 280  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  12346021 attttattcaatcaaaggtctataatcgttgattcaccgaataaaattaaattgaaaacacagtattattgtactatttcttttcttctgcaaaatttga 12345922  T
Q  281 cgttcttc 288  Q
    ||||||||    
T  12345921 cgttcttc 12345914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 19323817 - 19323743
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaagg 198  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||| | ||||||||  ||||||||    
T  19323817 caggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccatcgattttatttgattaaagg 19323743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 2512439 - 2512491
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  2512439 caggatccgttgacacctgatgtcaacgaattcgttgacaccaaatattaacc 2512491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 10171273 - 10171329
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  10171273 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 10171329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 19653967 - 19654023
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||| ||||||||||||||||||||||| | | |||| |||||||||||||||||    
T  19653967 gagtcaagatctgttgacacctggtgtcaatggactcgttgacaccaaatcttaacc 19654023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 26529567 - 26529511
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  26529567 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 26529511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 33435337 - 33435392
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 175  Q
    |||| |||||| ||||||||||||||| |||| |||||| ||||||||||||||||    
T  33435337 gagttaggatccgttgacacctggtgttaacggattcgttgacaccaaatcttaac 33435392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 8489334 - 8489284
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  8489334 gagtcaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 8489284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 33436327 - 33436274
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||||||| ||||||||| | |||||||| |||||| |||||||||||||||    
T  33436327 agtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatcttaa 33436274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 10172020 - 10171964
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  10172020 gagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaacc 10171964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 19311880 - 19311828
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatctta 173  Q
    |||||||||  ||||||||| |||||||||| |||||| ||||||||||||||    
T  19311880 agtcaggattcgttgacaccaggtgtcaacggattcgttgacaccaaatctta 19311828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 21133281 - 21133225
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| |||||||||  |||| ||||||||||| |||||||||||||||||    
T  21133281 gagttaggatccgttgacaccatgtgttaacgaattcgttgacaccaaatcttaacc 21133225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 26528820 - 26528876
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  26528820 gagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaacc 26528876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 505534 - 505583
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    ||||||||||||||||||| | |||||||||  |||||| ||||||||||    
T  505534 gagtcaggatctgttgacatcaggtgtcaacagattcgttgacaccaaat 505583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 3623172 - 3623228
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||||||| ||||    
T  3623172 gagttaggatccgttgacatcaggtgtcaacgaattctttgacaccaaatctcaacc 3623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 8488466 - 8488522
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  8488466 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 8488522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 19322992 - 19323048
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    ||||||||| |||||||||| |||||| |||||||||||| | ||| | ||||||||    
T  19322992 gttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 19323048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 120 - 274
Target Start/End: Complemental strand, 29559474 - 29559320
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccg 219  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||| || || |||||||||||||| |||||||| |||||||| |||||  |    
T  29559474 gagttaggatctgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaatcatccattttattcaatcaaaggtctgtaatcgtttgttcatgg 29559375  T
Q  220 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaa 274  Q
    |||||| |||||||||||||| |  ||||||| ||| ||||||||||||||||||    
T  29559374 aataaacttaaattgaaaacacattattattgcactctttcttttcttctgcaaa 29559320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 1296377 - 1296434
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||| |||||    
T  1296377 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacca 1296434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 9276384 - 9276327
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||| |||||    
T  9276384 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacca 9276327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 9540333 - 9540386
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  9540333 caggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaacca 9540386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 15774205 - 15774273
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaatt 193  Q
    |||||| |||||||||||||||||||||||| || |||||||||||| ||||| | |||||||| ||||    
T  15774205 aggatccgttgacacctggtgtcaacgaatttgttgacaccaaatctcaaccatcaattttatttaatt 15774273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 22301919 - 22301867
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  22301919 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaacca 22301867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 24933838 - 24933891
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||| |||||    
T  24933838 caggatccgttgacacctggtgtcaacgaattcattgacaccaaatctcaacca 24933891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 1297177 - 1297109
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||| | ||||||||    
T  1297177 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 1297109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 9275584 - 9275652
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||| | ||||||||    
T  9275584 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 9275652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 26752771 - 26752720
Alignment:
Q  126 ggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||| ||||||||| ||||||||||||||||| |||| |||||||||||||    
T  26752771 ggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatcttaacca 26752720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 29512369 - 29512420
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||||||    
T  29512369 gagtcatgatccgttgacacctggtgtcaacgaatttgttgacaccaaatct 29512420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 33512095 - 33512149
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| |||| ||||    
T  33512095 gagtcaggatccgttgacacctagtgtcaacgaattcgttgacactaaatattaa 33512149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 18174724 - 18174668
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  18174724 gagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 18174668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 22560622 - 22560566
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||| | |||||||||| |||||| |||||||||||| ||||    
T  22560622 gagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatctcaacc 22560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 27177915 - 27177959
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||    
T  27177915 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 27177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 29719448 - 29719500
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  29719448 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 29719500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 8541749 - 8541803
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||||||| ||||||| | ||| ||||||||||||| ||||| |||||||||    
T  8541749 gagtcaggatccgttgacatcaggtctcaacgaattcgttgacacaaaatcttaa 8541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 11751123 - 11751073
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| |||||| ||||||||| |||||||||||||||||  ||||||||||    
T  11751123 gagttaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 11751073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 18174097 - 18174147
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| |||||| ||||||||| ||||| ||||||||||| |||||||||||    
T  18174097 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 18174147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 22301192 - 22301242
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||| ||||||||| ||||||||||||| |||  ||||||||||    
T  22301192 gagtcaggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 22301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 23343778 - 23343828
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||||||||||||||||| | |||||||| |||||| |||| |||||||    
T  23343778 agtcaggatctgttgacaccagatgtcaacggattcgttgacatcaaatct 23343828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 23857078 - 23857028
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| |||||| |||||||||||||||||||| ||| || |||||||||||    
T  23857078 gagttaggatccgttgacacctggtgtcaacggattggttgacaccaaatc 23857028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 16693015 - 16692974
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  16693015 ttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 16692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 36237629 - 36237678
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    ||||||||||| ||||||||| |||||||||| |||| | ||||||||||    
T  36237629 gagtcaggatccgttgacaccaggtgtcaacggattcattgacaccaaat 36237678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 38361077 - 38361122
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||| | ||||||||||||||||| |||||||||||| |||||    
T  38361077 gttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacca 38361122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 11007238 - 11007286
Alignment:
Q  129 tctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||||||||| |||||||||| |||||| ||||| |||||| |||||    
T  11007238 tctgttgacaccaggtgtcaacggattcgttgacactaaatctcaacca 11007286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 11750255 - 11750311
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  11750255 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 11750311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 19918776 - 19918720
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||| ||| |||||||| |||||| |||| ||||||| ||||    
T  19918776 gagtcaggatccgttgacatctgatgtcaacggattcgttgacatcaaatctcaacc 19918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 33504113 - 33504234
Alignment:
Q  160 gacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaacaaagcattattgtactattt 259  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| ||| || ||||||||||| |||    
T  33504113 gacaccaaatctcaaccatccattttattcaatcaaaggtctataatcgtttgttcatcgaataaacttaaattgaacacacagtattattgtactcttt 33504212  T
Q  260 cttttcttctgcaaaatttgac 281  Q
    ||||||||||||||||||||||    
T  33504213 cttttcttctgcaaaatttgac 33504234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 25469141 - 25469085
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||    
T  25469141 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 25469085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 30664031 - 30663975
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||||||||| ||||    
T  30664031 gagtcaggatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaacc 30663975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 28181535 - 28181586
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  28181535 aggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaacc 28181586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 37852521 - 37852570
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  37852521 agtcaggatccgttgacacctggtgtcaacgaattcgttaacaccaaatc 37852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 7406242 - 7406298
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| ||||| ||||||||||| |||||||||||| ||||    
T  7406242 gagtcaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatctcaacc 7406298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 13262830 - 13262886
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  13262830 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 13262886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 28182127 - 28182071
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||||||||||||| |||||||||| |||| | |||||||||||||||||    
T  28182127 gagtgaggatctgttgacaccaggtgtcaacggattctttgacaccaaatcttaacc 28182071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 50271838 - 50271783
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 175  Q
    ||||||||||| ||||||||| ||| |||| |||||||| ||||||||||||||||    
T  50271838 gagtcaggatccgttgacaccaggtatcaatgaattcgttgacaccaaatcttaac 50271783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 4439256 - 4439210
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  4439256 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatct 4439210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 8987787 - 8987844
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||| | |||||||||| |||||| |||||||||||| |||||    
T  8987787 gagtcaggatcggttgacatcaggtgtcaacggattcgttgacaccaaatctcaacca 8987844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 25671167 - 25671224
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||||||||| |||| ||||||  |||||||||| ||||||    
T  25671167 gagtcaggatccgttgacacctggtgttaacggattcgttaacaccaaatcctaacca 25671224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 4135599 - 4135527
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaat 192  Q
    |||| |||||| |||| || | |||||||||  |||||| |||||||||||||||||| | ||||||||||||    
T  4135599 gagttaggatccgttggcatcaggtgtcaacatattcgttgacaccaaatcttaaccatcaattttattcaat 4135527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 13263571 - 13263515
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||| | |||||| |||||||||||| ||||    
T  13263571 gagtcaggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaacc 13263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 17171933 - 17171977
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||    
T  17171933 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 17171977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 30663355 - 30663411
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| ||| |||||| |||||| |||||||||||| ||||    
T  30663355 gagtcaggatccgttgacaccaggtatcaacggattcgttgacaccaaatctcaacc 30663411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 32038474 - 32038530
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||| ||| ||||||||||||||||| |||||||||||| ||||    
T  32038474 gagttaggatcggttgataccaggtgtcaacgaattcgttgacaccaaatctcaacc 32038530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 34309281 - 34309229
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  34309281 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 34309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 49680808 - 49680876
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| | ||| | ||||||||    
T  49680808 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 49680876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 4433897 - 4433851
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  4433897 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 4433851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 12760773 - 12760811
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgt 158  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  12760773 gagttaggatccgttgacacctggtgtcaacgaattcgt 12760811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 19172630 - 19172580
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||||||||    
T  19172630 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 19172580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 36389773 - 36389823
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||||||| |||||||||||||||||||| ||| |  ||||||||||||    
T  36389773 agtcaggatccgttgacacctggtgtcaacggatttgctgacaccaaatct 36389823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 36390422 - 36390372
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| |||||| ||||||||| ||||||||||||| ||| |||||||||||    
T  36390422 gagttaggatccgttgacaccaggtgtcaacgaatccgttgacaccaaatc 36390372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 169677 - 169625
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| ||||||||||||||  | |||||||||||| |||||    
T  169677 aggatccgttgacaccaggtgtcaacgaatttattgacaccaaatctcaacca 169625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 10121607 - 10121551
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| |||||||||| ||| || |||||||||||| ||||    
T  10121607 gagttaggatccgttgacaccaggtgtcaacggattggttgacaccaaatctcaacc 10121551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 25468507 - 25468563
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||| |||||||||| |||| | |||||||||||| ||||    
T  25468507 gagtcaggatccattgacaccaggtgtcaacggattcattgacaccaaatctcaacc 25468563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 30931898 - 30931942
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||||| |||||||||| ||||||  |||||||||||||||||    
T  30931898 ttgacaccaggtgtcaacggattcgttaacaccaaatcttaacca 30931942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 49681724 - 49681660
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    ||||||| ||||||||| | | ||||||||| ||| |||||||||||| ||||| | ||||||||    
T  49681724 caggatccgttgacaccagatatcaacgaatccgttgacaccaaatctcaaccatcgattttatt 49681660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 16664180 - 16664023
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccg 219  Q
    |||| |||||| ||||||||| |||||||||| || ||| ||||| |||||| ||||| | ||| || | |||  || | ||||||| ||| |||||||     
T  16664180 gagttaggatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaaccatctattgtaataaatccaatggctataattgtttgttcacca 16664081  T
Q  220 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatt 277  Q
    |||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  16664080 aataaacttaaattgaaaacatagtattattgtactctttcttttcttctgcaaaatt 16664023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 17638540 - 17638383
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccg 219  Q
    |||| |||||| ||||||||| |||||||||| || ||| ||||| |||||| ||||| | ||| || | |||  || | ||||||| ||| |||||||     
T  17638540 gagttaggatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaaccatctattgtaataaatccaatggctataattgtttgttcacca 17638441  T
Q  220 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatt 277  Q
    |||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  17638440 aataaacttaaattgaaaacatagtattattgtactctttcttttcttctgcaaaatt 17638383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18829610 - 18829668
Alignment:
Q  8 tgtggacatccaaggctgaataatataaaaagacttgctacatacaaaagccattactc 66  Q
    |||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  18829610 tgtgaacatccaaggctaaataatataaatagacttgctatatacaaaagccattactc 18829668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 1417610 - 1417662
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1417610 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaacca 1417662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 22319973 - 22320073
Alignment:
Q  164 ccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaacaaagcattattgtactatttcttt 263  Q
    ||||||||  |||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||| |||||||||||||| || | ||||||||| ||| |||    
T  22319973 ccaaatctcgaccatccattgtattcgatcaaaggcctataatcgtttgttcaccaaataaacttaaattgaaaacacagtaatattgtactcttttttt 22320072  T
Q  264 t 264  Q
    |    
T  22320073 t 22320073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 38226025 - 38225973
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  38226025 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaacca 38225973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 25343294 - 25343237
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||| |||||||| |||||||| |||||||||||| |||||    
T  25343294 gagtcaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacca 25343237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 36378809 - 36378858
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  36378809 gagtcaggatctgttgacacctggtgtcgacggattcgttgacaccaaat 36378858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 46428184 - 46428241
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||    
T  46428184 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacca 46428241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 7668480 - 7668536
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||    
T  7668480 agtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacca 7668536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 25342494 - 25342562
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||| | ||||||||    
T  25342494 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 25342562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 25343300 - 25343368
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||| | ||||||||    
T  25343300 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 25343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 26636100 - 26636156
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  26636100 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 26636156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 27948443 - 27948499
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  27948443 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 27948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 45099948 - 45099892
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  45099948 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaattttaacc 45099892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 25599019 - 25599070
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  25599019 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 25599070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 46428872 - 46428821
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||| |||||||    
T  46428872 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatct 46428821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 13785644 - 13785594
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||||||    
T  13785644 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 13785594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 3029248 - 3029203
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||    
T  3029248 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 3029203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 21497035 - 21496982
Alignment:
Q  123 tcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  21497035 tcaggatccgttgacaacaggtgtcaacgaattcgttgacaccaaatctcaacc 21496982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 23889861 - 23889812
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||||||    
T  23889861 gagtcaagatccgttggcacctggtgtcaacgaattcgttgacaccaaat 23889812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 3772581 - 3772525
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  3772581 gagttaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatctcaacc 3772525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 30660590 - 30660658
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| | ||| | ||||||||    
T  30660590 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 30660658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 30661506 - 30661454
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  30661506 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 30661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 37949606 - 37949658
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  37949606 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 37949658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 37950522 - 37950454
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| | ||| | ||||||||    
T  37950522 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 37950454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 40273557 - 40273613
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  40273557 gagttaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 40273613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 3163585 - 3163660
Alignment:
Q  165 caaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaaca 240  Q
    ||||| || |||| ||||| ||||  || ||||| ||||||||| | |||||||||||||| ||||||||||||||    
T  3163585 caaattttgaccatccattgtatttgatcaaaggcctataatcgattgttcaccgaataaatttaaattgaaaaca 3163660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 26636914 - 26636859
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||| ||||||||  |||||||||| |||||| |||||||||||| ||||    
T  26636914 agtcaggatccgttgacacaaggtgtcaacggattcgttgacaccaaatctcaacc 26636859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 44472384 - 44472350
Alignment:
Q  13 acatccaaggctgaataatataaaaagacttgcta 47  Q
    |||||||||||| ||||||||||||||||||||||    
T  44472384 acatccaaggctaaataatataaaaagacttgcta 44472350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 23901136 - 23901095
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||||| ||||||||||||||||| ||||| |||||||||    
T  23901136 ttgacaccaggtgtcaacgaattcgttgacactaaatcttaa 23901095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 43065164 - 43065119
Alignment:
Q  127 gatctgttgacacctggtgtcaacgaattcgtcgacaccaaatctt 172  Q
    |||| ||||||||| |||||||||| |||||| |||||||||||||    
T  43065164 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctt 43065119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 45099136 - 45099185
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||| ||||||| | |||||||||||||||||  ||||||||||    
T  45099136 agtcaggatccgttgacatcaggtgtcaacgaattcgttaacaccaaatc 45099185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 47719746 - 47719705
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  47719746 ttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 47719705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 3027987 - 3028027
Alignment:
Q  136 acacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||| ||||||||||||||||| |||||||||||| ||||    
T  3027987 acaccaggtgtcaacgaattcgttgacaccaaatctcaacc 3028027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 18977823 - 18977767
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||  |||||||| |||||||||| ||||||  ||||||||||| |||||    
T  18977823 agtcaggatccattgacaccaggtgtcaacggattcgttaacaccaaatctcaacca 18977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 19067638 - 19067690
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| |||||||||  ||||||||| |||||| |||||||||||| ||||    
T  19067638 caggatccgttgacaccacgtgtcaacggattcgttgacaccaaatctcaacc 19067690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 22022481 - 22022449
Alignment:
Q  15 atccaaggctgaataatataaaaagacttgcta 47  Q
    |||||||||| ||||||||||||||||||||||    
T  22022481 atccaaggctaaataatataaaaagacttgcta 22022449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 24389666 - 24389614
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||| |||||||||| |||| | |||||||||||| |||||    
T  24389666 aggatccgttgacaccaggtgtcaacggattcattgacaccaaatctcaacca 24389614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 7842581 - 7842440
Alignment:
Q  123 tcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaaggtctataatcgttggttcaccgaat 222  Q
    ||||||||  |||||| | ||||||||||||||||| |||||||||||| ||||| | |||| ||| |||  || | |||||||  || || ||||||||    
T  7842581 tcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccatctatttcattaaatccaatggctataattatttgtacaccgaat 7842482  T
Q  223 aaaattaaattgaaaacaaagcattattgtactatttctttt 264  Q
    ||| ||||||||||| || |  ||||||||||| ||||||||    
T  7842481 aaacttaaattgaaagcacaatattattgtactctttctttt 7842440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 8247694 - 8247772
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaagg 198  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||  | |||||||| ||| |||||    
T  8247694 gagtcaggatccgttgacacctggtgtcaacggattcgttgacacaaaatcttaaccgtctattttatttaatcaaagg 8247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 47785854 - 47785797
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||    
T  47785854 gagtcaggatctgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacca 47785797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 142574 - 142517
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccat 182  Q
    |||||| ||||||||| ||||||||||||||| | |||||||||||||||||| ||||    
T  142574 aggatccgttgacaccgggtgtcaacgaattcattgacaccaaatcttaaccatccat 142517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 8248575 - 8248519
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| | |||||||| |||||| |||||||||||||||||    
T  8248575 gagtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatcttaacc 8248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 8265365 - 8265437
Alignment:
Q  126 ggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttattcaattaaagg 198  Q
    ||||| |||||||||||||||||||| |||||| ||||| |||||||||||  | |||||||| ||| |||||    
T  8265365 ggatccgttgacacctggtgtcaacggattcgttgacacaaaatcttaaccgtctattttatttaatcaaagg 8265437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 8266240 - 8266184
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| | |||||||| |||||| |||||||||||||||||    
T  8266240 gagtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatcttaacc 8266184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 24374787 - 24374843
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||    
T  24374787 gagtcaggatccgttgacaccagctgtcaacgaattcgttgacaccaaatctcaacc 24374843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 26147087 - 26147031
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  26147087 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 26147031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 11938714 - 11938765
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||| ||||    
T  11938714 aggatctgttcacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 11938765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 598523 - 598573
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||||||||||||| | |||||||||||||||  ||||||||||    
T  598523 gagtcaggatctgttgacaccagatgtcaacgaattcgttaacaccaaatc 598573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 599351 - 599305
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  599351 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatct 599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 9365167 - 9365224
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||| ||||| |||||||||||||| || |||||||||||| |||||    
T  9365167 gagtcaggatccgttaacaccaggtgtcaacgaatttgttgacaccaaatctcaacca 9365224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 19080387 - 19080432
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||    
T  19080387 caggatctgttgacaccaggtgtcaacggattcgttgacaccaaat 19080432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 31329772 - 31329715
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||| |||||||||| ||||||  |||||||||| ||||||    
T  31329772 gagtcaggatccgttgacaccaggtgtcaacggattcgttaacaccaaatcctaacca 31329715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 6508009 - 6508049
Alignment:
Q  7 ctgtggacatccaaggctgaataatataaaaagacttgcta 47  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  6508009 ctgtgaacatccaaggctaaataatataaaaagacttgcta 6508049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 20774235 - 20774179
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  20774235 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 20774179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 24158875 - 24158819
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||| |||||||||  |||||| |||||||||||||||||    
T  24158875 gagtcaggatccattgacaccaggtgtcaacagattcgttgacaccaaatcttaacc 24158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 30573764 - 30573708
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  30573764 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 30573708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 40495093 - 40495141
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaa 168  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  40495093 gagtcaggatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 40495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 47688534 - 47688478
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  47688534 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 47688478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 56262480 - 56262532
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  56262480 caggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 56262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 44792691 - 44792641
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||||    
T  44792691 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 44792641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 47687907 - 47687957
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| |||||| ||||||||| ||||| ||||||||||| |||||||||||    
T  47687907 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 47687957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 55976176 - 55976218
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||||| |||||||||| |||||| |||||||||||||||    
T  55976176 gttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 55976218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 7841791 - 7841857
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccattttatt 188  Q
    |||| |||||| |||||||  |||||||||||||||||| |||||||||||| ||| | | ||||||||    
T  7841791 gagttaggatccgttgaca--tggtgtcaacgaattcgttgacaccaaatctcaactatctattttatt 7841857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 44469491 - 44469540
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||| |||| | ||||||| ||||||||||||||||| |||||||||||    
T  44469491 agtcatgatccgatgacaccaggtgtcaacgaattcgttgacaccaaatc 44469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 55001488 - 55001439
Alignment:
Q  127 gatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| ||||||||| |||||||||| |||||| ||||| |||||||||||    
T  55001488 gatccgttgacaccaggtgtcaacggattcgttgacactaaatcttaacc 55001439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 1866346 - 1866398
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| ||||||||  |||||||| |||||||| |||||||||||| |||||    
T  1866346 aggatccgttgacactaggtgtcaatgaattcgttgacaccaaatctcaacca 1866398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 16903686 - 16903642
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  16903686 gttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 16903642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 48648201 - 48648257
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||    
T  48648201 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 48648257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 14871151 - 14871202
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  14871151 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 14871202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 13477055 - 13477112
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||| ||||||||||||||| | ||||||||||| ||||||    
T  13477055 gagtcaggatccgttgacaccaggtgtcaacgaattcattgacaccaaatcctaacca 13477112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 45081458 - 45081401
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| |||||||||| ||||||||| |||||| |||||||||||| |||||    
T  45081458 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcaacca 45081401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 20213586 - 20213530
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| |||||| |||||||||| ||||||||||| |||||    
T  20213586 gagtcaggatccgttgacaccaggtgtcgacgaattcgttgacaccaaatcctaacc 20213530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 37520614 - 37520559
Alignment:
Q  122 gtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||| ||||| ||| ||||||||||||||||| |||||||||||| |||||    
T  37520614 gtcaggatccgttgataccaggtgtcaacgaattcgttgacaccaaatctcaacca 37520559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 37988273 - 37988222
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    |||||||||||  |||||||| ||||||||||||||||| ||||||||||||    
T  37988273 gagtcaggatccattgacaccaggtgtcaacgaattcgttgacaccaaatct 37988222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 51827548 - 51827493
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||| |||| |||||||||||||||||||| |||||| | |||||||||||||||    
T  51827548 agtcaagatccgttgacacctggtgtcaacggattcgttgtcaccaaatcttaacc 51827493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 10847289 - 10847327
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgt 158  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  10847289 gagtcaggatccgttgacacctggtgtcaacgaattcgt 10847327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 20212978 - 20213028
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||    
T  20212978 gagtcagaatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 20213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 21727580 - 21727530
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||||||    
T  21727580 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 21727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 17603171 - 17603220
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    |||||| ||||||||| |||||||||| |||||| |||||||||||||||    
T  17603171 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 17603220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 46150784 - 46150727
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||||||| ||||||||  |||||||||| |||||| |||||||||||| |||||    
T  46150784 gagtcaggatccgttgacactaggtgtcaacggattcgttgacaccaaatctcaacca 46150727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 981677 - 981721
Alignment:
Q  132 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  981677 gttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 27082774 - 27082830
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||||  ||||||||||||||||| ||||||||||| |||||    
T  27082774 gagtcaggatccattgacactaggtgtcaacgaattcgttgacaccaaatcctaacc 27082830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 48507083 - 48507031
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  48507083 caggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 48507031  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 48764475 - 48764531
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||||  |||||| | ||||||||||||||||| |||||||||||| ||||    
T  48764475 gagtcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 48764531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 52266508 - 52266452
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||| ||||| ||||| ||||||||||| |||||||||||| ||||    
T  52266508 gagtcaggatccgttaacaccaggtgttaacgaattcgttgacaccaaatctcaacc 52266452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 13349418 - 13349469
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||| ||||| ||| ||||||||| ||||||| |||||||||||||||||    
T  13349418 aggatcggttgataccaggtgtcaacaaattcgttgacaccaaatcttaacc 13349469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 13477820 - 13477777
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  13477820 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 13477777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 48765124 - 48765069
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||  |||||||| |||||||| | |||||| |||||||||||||||||    
T  48765124 agtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 48765069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 265152 - 265102
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 171  Q
    ||||| |||| ||||||||| |||||||||| |||||| ||||||||||||    
T  265152 agtcatgatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 265102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 33276890 - 33276940
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||||||||||| ||| |||||||||| | |||||| |||||||||||    
T  33276890 gagtcaggatctgttaacatctggtgtcaatggattcgttgacaccaaatc 33276940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 33277559 - 33277509
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||| ||| ||||||||| |||||||||||||||||  ||||||||||    
T  33277559 gagtcagaatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 33277509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 44029824 - 44029786
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgt 158  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  44029824 gagtcaggatccgttgacatctggtgtcaacgaattcgt 44029786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 48413317 - 48413367
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||| ||||| |||||||||| |||||||||| |||||| |||||||||||    
T  48413317 gagtaaggatttgttgacaccaggtgtcaacggattcgttgacaccaaatc 48413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 48649226 - 48649172
Alignment:
Q  122 gtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||  |||||||| |||||||||  |||||| |||||||||||||||||    
T  48649226 gtcaggatccattgacaccaggtgtcaacagattcgttgacaccaaatcttaacc 48649172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 8949938 - 8949995
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccat 182  Q
    |||||| |||||||||  |||||||||||| ||| ||||| |||||||||||| ||||    
T  8949938 aggatccgttgacaccatgtgtcaacgaatccgttgacacaaaatcttaaccatccat 8949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 48506443 - 48506491
Alignment:
Q  127 gatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||| |||||||| |||||||||||||||||| |||||||||||| ||||    
T  48506443 gatccgttgacac-tggtgtcaacgaattcgttgacaccaaatctcaacc 48506491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 52281764 - 52281821
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    ||||||| ||| ||||| |||||||||||||| |||||| ||||||| |||| |||||    
T  52281764 gagtcagaatccgttgatacctggtgtcaacggattcgttgacaccagatctcaacca 52281821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 52605538 - 52605501
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcg 157  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  52605538 gagtcaggatccgttgacaccaggtgtcaacgaattcg 52605501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 54458715 - 54458670
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    |||||| |||||||||||||||||||| ||| || |||||||||||    
T  54458715 aggatccgttgacacctggtgtcaacggattggttgacaccaaatc 54458670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 17604002 - 17603962
Alignment:
Q  134 tgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 174  Q
    ||||||| |||||||||| |||||| |||||||||||||||    
T  17604002 tgacaccaggtgtcaacggattcgttgacaccaaatcttaa 17603962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 31974654 - 31974706
Alignment:
Q  125 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||| |||||||||  ||||||||| |||||| |||||||||||| |||||    
T  31974654 aggatccgttgacaccaagtgtcaacggattcgttgacaccaaatctcaacca 31974706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 41458031 - 41458087
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||  ||||| ||| |||||||||| |||||| |||||||||||| ||||    
T  41458031 gagtcaggattcgttgataccaggtgtcaacggattcgttgacaccaaatctcaacc 41458087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 428956 - 428900
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| ||||||||| ||| ||||||||||||| |||||||||||| ||||    
T  428956 gagtcaggatccgttgacacccggtatcaacgaattcgttgacaccaaatctcaacc 428900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 26589 - 26652
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccagccatt 183  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||  ||||| |||||    
T  26589 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcacaaccatccatt 26652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 1588 - 1634
Alignment:
Q  124 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 170  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  1588 caggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatc 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 6939 - 6891
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaa 168  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  6939 gagtcaggatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 15020 - 15076
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    ||||||||||| |||||||||| ||||||||| |||| | |||||||||||| ||||    
T  15020 gagtcaggatccgttgacacctagtgtcaacggattcattgacaccaaatctcaacc 15076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 15900 - 15856
Alignment:
Q  133 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 177  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||    
T  15900 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacca 15856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 15080 - 15135
Alignment:
Q  121 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 176  Q
    |||||||||| |||||||||| ||||||||| |||| | |||||||||||| ||||    
T  15080 agtcaggatccgttgacacctagtgtcaacggattcattgacaccaaatctcaacc 15135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 5434 - 5385
Alignment:
Q  120 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 169  Q
    ||||||||||| ||||||||| |||||||||| ||| || ||||||||||    
T  5434 gagtcaggatccgttgacaccaggtgtcaacggatttgttgacaccaaat 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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