View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1261_high_17 (Length: 270)

Name: NF1261_high_17
Description: NF1261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1261_high_17
NF1261_high_17
[»] chr5 (24 HSPs)
chr5 (15-200)||(23539896-23540081)
chr5 (129-200)||(23110934-23111005)
chr5 (70-183)||(22827554-22827667)
chr5 (129-200)||(22337775-22337847)
chr5 (129-200)||(22341313-22341385)
chr5 (91-200)||(23669409-23669519)
chr5 (91-200)||(26496934-26497044)
chr5 (129-200)||(38144269-38144341)
chr5 (92-200)||(30344430-30344537)
chr5 (129-200)||(22751389-22751461)
chr5 (91-200)||(23694504-23694614)
chr5 (27-146)||(21495986-21496107)
chr5 (98-146)||(21900798-21900845)
chr5 (94-156)||(18407738-18407800)
chr5 (21-200)||(21662878-21663058)
chr5 (24-141)||(17021715-17021835)
chr5 (98-146)||(18820064-18820112)
chr5 (101-146)||(21830689-21830733)
chr5 (159-200)||(42961852-42961894)
chr5 (101-146)||(23443168-23443213)
chr5 (94-146)||(428370-428422)
chr5 (94-146)||(9777314-9777366)
chr5 (94-146)||(19512601-19512653)
chr5 (94-146)||(28369842-28369894)
[»] chr4 (33 HSPs)
chr4 (15-200)||(4829894-4830079)
chr4 (15-200)||(4833189-4833374)
chr4 (15-200)||(24046215-24046401)
chr4 (21-200)||(15747292-15747472)
chr4 (23-183)||(13447684-13447844)
chr4 (79-200)||(4828434-4828554)
chr4 (23-183)||(2583902-2584062)
chr4 (91-200)||(13043528-13043636)
chr4 (129-200)||(18214018-18214090)
chr4 (91-200)||(28386435-28386545)
chr4 (91-200)||(53386651-53386761)
chr4 (129-200)||(2757579-2757651)
chr4 (91-200)||(10314743-10314853)
chr4 (91-200)||(41792721-41792831)
chr4 (206-265)||(49011307-49011367)
chr4 (89-200)||(9333286-9333398)
chr4 (89-200)||(9387069-9387181)
chr4 (91-200)||(14699753-14699863)
chr4 (159-200)||(14036007-14036048)
chr4 (91-200)||(15712445-15712555)
chr4 (94-156)||(15408345-15408407)
chr4 (91-189)||(1101534-1101633)
chr4 (98-146)||(14822542-14822590)
chr4 (101-169)||(14486883-14486951)
chr4 (94-146)||(15535330-15535382)
chr4 (159-200)||(32490998-32491040)
chr4 (98-167)||(8835101-8835169)
chr4 (159-200)||(15447132-15447173)
chr4 (132-200)||(18230988-18231056)
chr4 (159-198)||(13511254-13511294)
chr4 (94-146)||(14555012-14555064)
chr4 (94-146)||(49546736-49546788)
chr4 (94-146)||(53904288-53904340)
[»] chr7 (39 HSPs)
chr7 (21-200)||(34958698-34958877)
chr7 (23-200)||(831370-831547)
chr7 (23-200)||(1196550-1196727)
chr7 (15-200)||(11662236-11662422)
chr7 (15-200)||(13256824-13257000)
chr7 (23-183)||(3288535-3288694)
chr7 (75-200)||(35367258-35367381)
chr7 (75-200)||(16921925-16922049)
chr7 (75-200)||(16929018-16929142)
chr7 (128-200)||(10895514-10895587)
chr7 (128-200)||(16009835-16009908)
chr7 (91-200)||(13394426-13394536)
chr7 (128-200)||(15168441-15168514)
chr7 (129-200)||(18873608-18873680)
chr7 (139-200)||(148885-148947)
chr7 (129-200)||(14113584-14113656)
chr7 (129-200)||(14423235-14423307)
chr7 (101-183)||(15691147-15691228)
chr7 (101-183)||(15698740-15698821)
chr7 (98-146)||(16475069-16475116)
chr7 (98-146)||(19153037-19153084)
chr7 (98-146)||(20752436-20752483)
chr7 (111-200)||(21064184-21064272)
chr7 (91-200)||(41285222-41285332)
chr7 (59-146)||(41780838-41780924)
chr7 (101-146)||(14249470-14249514)
chr7 (101-146)||(14264940-14264984)
chr7 (98-146)||(19146716-19146763)
chr7 (98-146)||(20746115-20746162)
chr7 (91-173)||(21518079-21518161)
chr7 (101-146)||(46347696-46347740)
chr7 (159-189)||(14188061-14188091)
chr7 (159-189)||(14190650-14190680)
chr7 (159-200)||(14567504-14567546)
chr7 (94-146)||(11304398-11304450)
chr7 (101-156)||(13679701-13679757)
chr7 (94-146)||(16184395-16184447)
chr7 (94-146)||(23663914-23663966)
chr7 (94-146)||(46626170-46626222)
[»] scaffold0021 (1 HSPs)
scaffold0021 (15-200)||(147752-147937)
[»] chr6 (22 HSPs)
chr6 (15-200)||(29415292-29415478)
chr6 (129-200)||(2286501-2286573)
chr6 (129-200)||(23839448-23839520)
chr6 (129-200)||(23058193-23058265)
chr6 (139-200)||(21347064-21347126)
chr6 (91-198)||(22593331-22593439)
chr6 (101-183)||(21470982-21471063)
chr6 (94-155)||(9187710-9187771)
chr6 (101-200)||(25773745-25773844)
chr6 (134-200)||(10985843-10985911)
chr6 (94-146)||(14615229-14615281)
chr6 (101-171)||(23106389-23106458)
chr6 (91-146)||(25348702-25348757)
chr6 (159-200)||(4478160-4478202)
chr6 (101-183)||(21477482-21477562)
chr6 (159-200)||(25598916-25598958)
chr6 (101-146)||(14132034-14132078)
chr6 (101-146)||(23232368-23232412)
chr6 (122-155)||(24512631-24512664)
chr6 (91-156)||(9184774-9184839)
chr6 (94-146)||(25397388-25397440)
chr6 (94-146)||(28288294-28288346)
[»] scaffold0001 (1 HSPs)
scaffold0001 (15-200)||(391461-391647)
[»] chr3 (38 HSPs)
chr3 (15-200)||(10953395-10953581)
chr3 (15-200)||(10952466-10952652)
chr3 (15-200)||(18893812-18894009)
chr3 (15-200)||(18898105-18898304)
chr3 (23-200)||(34851038-34851216)
chr3 (101-200)||(14646778-14646878)
chr3 (75-189)||(10988583-10988695)
chr3 (21-88)||(10833155-10833222)
chr3 (135-200)||(10833098-10833164)
chr3 (128-200)||(14762474-14762547)
chr3 (129-200)||(38310533-38310605)
chr3 (129-200)||(20247525-20247597)
chr3 (129-200)||(23370221-23370293)
chr3 (134-200)||(16801282-16801349)
chr3 (87-146)||(35985841-35985900)
chr3 (91-200)||(53225879-53225989)
chr3 (98-146)||(14287979-14288026)
chr3 (122-200)||(19444819-19444898)
chr3 (94-200)||(19451430-19451537)
chr3 (98-146)||(13062540-13062587)
chr3 (27-146)||(24283389-24283510)
chr3 (98-146)||(42110379-42110426)
chr3 (101-146)||(11643750-11643794)
chr3 (101-146)||(17497373-17497417)
chr3 (94-146)||(11304713-11304765)
chr3 (94-146)||(12478650-12478702)
chr3 (94-146)||(13693106-13693157)
chr3 (101-156)||(17240292-17240347)
chr3 (92-146)||(12536679-12536733)
chr3 (92-146)||(14543286-14543340)
chr3 (128-200)||(54974473-54974545)
chr3 (128-200)||(54977083-54977155)
chr3 (128-200)||(54979693-54979765)
chr3 (94-146)||(9534543-9534595)
chr3 (94-146)||(12154038-12154090)
chr3 (94-146)||(12364563-12364615)
chr3 (111-198)||(54042694-54042781)
chr3 (94-146)||(54521971-54522023)
[»] chr2 (29 HSPs)
chr2 (15-200)||(41300666-41300851)
chr2 (15-200)||(21072424-21072610)
chr2 (106-198)||(44089961-44090051)
chr2 (91-200)||(28350360-28350468)
chr2 (128-200)||(19661172-19661245)
chr2 (129-200)||(9243213-9243285)
chr2 (91-200)||(21238067-21238177)
chr2 (91-200)||(21240617-21240727)
chr2 (139-200)||(6259899-6259961)
chr2 (91-200)||(31504646-31504756)
chr2 (91-200)||(31507212-31507322)
chr2 (91-200)||(37380697-37380807)
chr2 (98-146)||(17635079-17635126)
chr2 (98-146)||(25351527-25351574)
chr2 (94-146)||(10683724-10683776)
chr2 (106-146)||(21120555-21120594)
chr2 (101-156)||(23265362-23265417)
chr2 (101-156)||(23280430-23280485)
chr2 (92-146)||(19036671-19036725)
chr2 (159-200)||(19664801-19664843)
chr2 (94-156)||(21908574-21908636)
chr2 (104-156)||(22842140-22842191)
chr2 (159-200)||(24272769-24272811)
chr2 (94-146)||(6483934-6483986)
chr2 (94-146)||(6487401-6487453)
chr2 (111-198)||(12626872-12626959)
chr2 (94-146)||(24653509-24653561)
chr2 (94-146)||(24659995-24660047)
chr2 (94-146)||(25106400-25106452)
[»] scaffold0819 (1 HSPs)
scaffold0819 (15-200)||(22-199)
[»] chr1 (15 HSPs)
chr1 (21-200)||(28313484-28313655)
chr1 (129-200)||(16373213-16373285)
chr1 (129-200)||(20436760-20436832)
chr1 (73-146)||(21985836-21985908)
chr1 (91-199)||(20580513-20580622)
chr1 (206-265)||(38183955-38184014)
chr1 (91-189)||(14431325-14431423)
chr1 (94-156)||(18713013-18713075)
chr1 (98-146)||(21733355-21733402)
chr1 (159-200)||(21180026-21180068)
chr1 (94-156)||(32651787-32651849)
chr1 (98-146)||(5381818-5381864)
chr1 (101-146)||(19665660-19665704)
chr1 (91-146)||(23194303-23194358)
chr1 (159-200)||(22219724-22219766)
[»] chr8 (18 HSPs)
chr8 (91-200)||(44433117-44433225)
chr8 (129-200)||(8727470-8727542)
chr8 (91-200)||(7300025-7300135)
chr8 (98-146)||(21931905-21931952)
chr8 (98-156)||(19750771-19750828)
chr8 (91-200)||(17615965-17616075)
chr8 (98-146)||(22744897-22744944)
chr8 (98-141)||(33090070-33090112)
chr8 (159-200)||(19883211-19883253)
chr8 (98-146)||(20004646-20004693)
chr8 (98-146)||(25623597-25623644)
chr8 (101-146)||(20257943-20257989)
chr8 (159-200)||(25657260-25657302)
chr8 (159-200)||(27940580-27940622)
chr8 (101-146)||(36444694-36444738)
chr8 (111-198)||(10833867-10833954)
chr8 (94-146)||(21299100-21299152)
chr8 (98-146)||(38184501-38184548)
[»] scaffold0586 (1 HSPs)
scaffold0586 (75-200)||(4928-5052)
[»] scaffold0413 (1 HSPs)
scaffold0413 (128-200)||(15615-15688)
[»] scaffold0207 (1 HSPs)
scaffold0207 (128-200)||(7672-7745)
[»] scaffold0241 (1 HSPs)
scaffold0241 (129-200)||(15509-15581)
[»] scaffold0127 (1 HSPs)
scaffold0127 (129-200)||(10507-10579)
[»] scaffold0023 (1 HSPs)
scaffold0023 (91-198)||(163519-163625)
[»] scaffold0502 (1 HSPs)
scaffold0502 (129-200)||(12576-12648)
[»] scaffold0422 (1 HSPs)
scaffold0422 (91-200)||(4146-4255)
[»] scaffold0019 (3 HSPs)
scaffold0019 (140-200)||(34702-34763)
scaffold0019 (91-156)||(135655-135720)
scaffold0019 (98-146)||(13799-13846)
[»] scaffold0337 (1 HSPs)
scaffold0337 (129-200)||(8503-8575)
[»] scaffold0042 (1 HSPs)
scaffold0042 (59-146)||(54005-54091)
[»] scaffold0553 (1 HSPs)
scaffold0553 (139-200)||(9910-9972)
[»] scaffold0544 (1 HSPs)
scaffold0544 (139-200)||(1240-1302)
[»] scaffold0132 (2 HSPs)
scaffold0132 (159-200)||(3424-3465)
scaffold0132 (159-200)||(11384-11425)
[»] scaffold0485 (1 HSPs)
scaffold0485 (101-183)||(3956-4037)
[»] scaffold0309 (1 HSPs)
scaffold0309 (98-146)||(9345-9392)
[»] scaffold0249 (2 HSPs)
scaffold0249 (98-146)||(5716-5763)
scaffold0249 (159-198)||(1979-2019)
[»] scaffold0180 (1 HSPs)
scaffold0180 (98-146)||(13615-13662)
[»] scaffold0165 (1 HSPs)
scaffold0165 (98-146)||(724-771)
[»] scaffold1992 (1 HSPs)
scaffold1992 (134-200)||(82-148)
[»] scaffold0104 (1 HSPs)
scaffold0104 (92-146)||(40597-40651)
[»] scaffold0077 (1 HSPs)
scaffold0077 (128-200)||(29146-29219)
[»] scaffold0011 (5 HSPs)
scaffold0011 (73-183)||(20563-20673)
scaffold0011 (94-146)||(253013-253064)
scaffold0011 (94-146)||(259619-259670)
scaffold0011 (101-146)||(148143-148187)
scaffold0011 (101-146)||(155296-155340)
[»] scaffold0298 (1 HSPs)
scaffold0298 (92-200)||(812-919)
[»] scaffold0124 (1 HSPs)
scaffold0124 (92-200)||(15715-15822)
[»] scaffold0012 (1 HSPs)
scaffold0012 (92-200)||(221929-222036)
[»] scaffold0669 (1 HSPs)
scaffold0669 (98-146)||(698-746)
[»] scaffold0490 (1 HSPs)
scaffold0490 (98-146)||(6090-6137)
[»] scaffold0462 (1 HSPs)
scaffold0462 (98-146)||(8165-8212)
[»] scaffold0297 (1 HSPs)
scaffold0297 (98-146)||(721-768)
[»] scaffold0201 (1 HSPs)
scaffold0201 (98-146)||(27491-27538)
[»] scaffold0139 (2 HSPs)
scaffold0139 (98-146)||(1863-1910)
scaffold0139 (101-146)||(27067-27111)
[»] scaffold0046 (1 HSPs)
scaffold0046 (98-146)||(71748-71795)
[»] scaffold0039 (1 HSPs)
scaffold0039 (98-146)||(2721-2768)
[»] scaffold0028 (2 HSPs)
scaffold0028 (98-146)||(2268-2315)
scaffold0028 (98-146)||(91543-91590)
[»] scaffold0026 (2 HSPs)
scaffold0026 (98-146)||(36748-36795)
scaffold0026 (102-146)||(143856-143899)
[»] scaffold0008 (1 HSPs)
scaffold0008 (98-146)||(123867-123914)
[»] scaffold0583 (1 HSPs)
scaffold0583 (99-146)||(5617-5663)
[»] scaffold0266 (2 HSPs)
scaffold0266 (99-146)||(13632-13678)
scaffold0266 (98-146)||(24186-24233)
[»] scaffold0010 (1 HSPs)
scaffold0010 (92-200)||(106505-106614)
[»] scaffold0222 (1 HSPs)
scaffold0222 (94-156)||(17034-17096)
[»] scaffold0117 (1 HSPs)
scaffold0117 (159-200)||(22124-22166)
[»] scaffold0114 (1 HSPs)
scaffold0114 (101-154)||(46787-46839)
[»] scaffold0005 (1 HSPs)
scaffold0005 (98-146)||(17119-17167)
[»] scaffold0751 (1 HSPs)
scaffold0751 (94-146)||(1584-1636)
[»] scaffold0053 (3 HSPs)
scaffold0053 (94-146)||(78881-78933)
scaffold0053 (98-146)||(45674-45721)
scaffold0053 (98-146)||(71845-71892)
[»] scaffold0178 (1 HSPs)
scaffold0178 (99-146)||(26625-26671)
[»] scaffold0146 (1 HSPs)
scaffold0146 (101-156)||(13853-13908)
[»] scaffold0131 (1 HSPs)
scaffold0131 (91-145)||(2764-2818)
[»] scaffold0962 (1 HSPs)
scaffold0962 (21-200)||(351-531)
[»] scaffold0453 (1 HSPs)
scaffold0453 (91-183)||(6790-6882)
[»] scaffold0324 (1 HSPs)
scaffold0324 (92-146)||(1800-1854)
[»] scaffold0278 (1 HSPs)
scaffold0278 (159-200)||(23462-23504)
[»] scaffold0169 (1 HSPs)
scaffold0169 (98-156)||(7166-7223)
[»] scaffold0156 (2 HSPs)
scaffold0156 (159-200)||(33026-33068)
scaffold0156 (94-146)||(26765-26817)
[»] scaffold0151 (1 HSPs)
scaffold0151 (159-200)||(10358-10400)
[»] scaffold0107 (1 HSPs)
scaffold0107 (159-200)||(4152-4194)
[»] scaffold0102 (1 HSPs)
scaffold0102 (92-146)||(30984-31038)
[»] scaffold0067 (3 HSPs)
scaffold0067 (92-146)||(46526-46580)
scaffold0067 (92-146)||(55541-55595)
scaffold0067 (92-146)||(61927-61981)
[»] scaffold0050 (1 HSPs)
scaffold0050 (98-171)||(14000-14073)
[»] scaffold0022 (2 HSPs)
scaffold0022 (101-146)||(37612-37658)
scaffold0022 (101-146)||(135672-135718)
[»] scaffold0235 (1 HSPs)
scaffold0235 (122-155)||(22380-22413)
[»] scaffold0205 (1 HSPs)
scaffold0205 (101-146)||(28425-28470)
[»] scaffold0091 (2 HSPs)
scaffold0091 (101-146)||(21707-21752)
scaffold0091 (101-146)||(25904-25949)
[»] scaffold0923 (1 HSPs)
scaffold0923 (94-146)||(1005-1057)
[»] scaffold0610 (1 HSPs)
scaffold0610 (94-146)||(6711-6763)
[»] scaffold0556 (1 HSPs)
scaffold0556 (94-146)||(3941-3993)
[»] scaffold0367 (1 HSPs)
scaffold0367 (94-146)||(12622-12674)
[»] scaffold0317 (1 HSPs)
scaffold0317 (101-156)||(1594-1650)
[»] scaffold0243 (1 HSPs)
scaffold0243 (94-146)||(11270-11322)
[»] scaffold0154 (1 HSPs)
scaffold0154 (94-146)||(17375-17427)
[»] scaffold0138 (1 HSPs)
scaffold0138 (98-146)||(12515-12562)
[»] scaffold0051 (1 HSPs)
scaffold0051 (94-146)||(61050-61102)
[»] scaffold0035 (1 HSPs)
scaffold0035 (94-146)||(11592-11644)
[»] scaffold0017 (1 HSPs)
scaffold0017 (94-146)||(127912-127964)


Alignment Details
Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 23539896 - 23540081
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23539896 aacctctgtttgtacgtgaaactggttctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 23539995  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  23539996 ttctaatttaaatccccaaactccaaaataattctattactccacttattctattaaataatgaaaatagccattaataaaataca 23540081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 23111005 - 23110934
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23111005 cccacactccaaaataattctatttctccacttattctattaaataatgaaaatagccattaataaaataca 23110934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 183
Target Start/End: Complemental strand, 22827667 - 22827554
Alignment:
Q  70 tattgtaacctcccaaatatt-cttaactcctcttaattc-tattaattctaatttaaatccccaaactcc-aaaataattctatttctccgcttattct 166  Q
    |||||||||||||||| |||| |||||||||||||||  | |||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||    
T  22827667 tattgtaacctcccaa-tattacttaactcctcttaaaccctattaattctaatttaa--ccccaaactcccaaaataattctatttctccacttattct 22827571  T
Q  167 attaaataatgaaaata 183  Q
    |||||||||| ||||||    
T  22827570 attaaataataaaaata 22827554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 22337775 - 22337847
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  22337775 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 22337847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 22341313 - 22341385
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  22341313 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 22341385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 23669409 - 23669519
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||||||     
T  23669409 cttaactcctcttaattctattaaattctaattt-aacccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaatagccat 23669506  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  23669507 ttaataaaataca 23669519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 26496934 - 26497044
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||||||||||| ||| ||| |||||| |||||||||||||||| | ||||||||||     
T  26496934 cttaactcctcttaattctattaaattccaattt-aacccccaaactccaaaataaatcctaattctcc-cttattctattaaatactaaaaatagccat 26497031  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  26497032 ttaataaaataca 26497044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 38144341 - 38144269
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  38144341 cccacactccaaaataattatatttctccacttattctattaaataatgaaaataaccatttaataaaataca 38144269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 30344537 - 30344430
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-tta 190  Q
    |||||||| |||||||||||||||||| ||||||  ||| |||||||||   ||| ||| |||||  ||||||||||||||||||||||||||||| |||    
T  30344537 ttaactccccttaattctattaattctcatttaac-cccgaaactccaattaaatcctaattctca-cttattctattaaataatgaaaatagccattta 30344440  T
Q  191 ataaaataca 200  Q
    ||||||||||    
T  30344439 ataaaataca 30344430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 22751389 - 22751461
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  22751389 cccacactctaaaataattctatttctccacttattctattaaataatgaaaataatcatttaataaaataca 22751461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 23694504 - 23694614
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||| ||     
T  23694504 cttaactcctcttaattctattaaattctaattt-aacccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaatagtcat 23694601  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  23694602 ttaataaaataca 23694614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 21495986 - 21496107
Alignment:
Q  27 tacgtgaaactgattctgactcttagttt-ctatttttcc--aacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaattt 123  Q
    |||||||||||| |||||||| | ||||| |||||||||   ||| || ||||||||||||| ||  ||||||||| |||||||||||||||||||| ||    
T  21495986 tacgtgaaactgcttctgactgtcagttttctatttttctctaacttaatgtaacctcccaattacacttaactccacttaattctattaattctaa-tt 21496084  T
Q  124 aaatccccaaactccaaaataat 146  Q
    ||||| ||| |||| ||||||||    
T  21496085 aaatctccagactctaaaataat 21496107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 21900845 - 21900798
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21900845 cctcttaattctattaattctaatt-aaatccccaaactccaaaataat 21900798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 18407800 - 18407738
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||| |||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||    
T  18407800 aactccccttaattctattaattcttaattaactccccacactccaaaataactctatttctc 18407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 21663058 - 21662878
Alignment:
Q  21 tgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaa-atattcttaactcct-cttaattctattaattct 118  Q
    |||||||| ||||||||| ||||||||||||| ||||| |||||  |   |   ||||||||||| || |  ||||||||  ||||||||  ||||||||    
T  21663058 tgtttgtatgtgaaactgcttctgactcttaggttctaattttctcagtaaacataacctcccaatatctaattaactcccacttaattcatttaattct 21662959  T
Q  119 aatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
     ||||||  ||| ||||||||||  ||||||| |||||  ||||||||||||||||||||||||| ||| |||||||||||||    
T  21662958 tatttaac-cccaaaactccaaataaattctaattctca-cttattctattaaataatgaaaataaccatttaataaaataca 21662878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 17021835 - 17021715
Alignment:
Q  24 ttgtacgtgaaactgattctgactcttagtttctatttttcc--aacctattgtaacctcccaaatatt-cttaactcctcttaat-tctattaattcta 119  Q
    |||||||||||| || ||||||||   ||||||||||||||   ||| || ||||||||||||| |||| ||||||||||| |||  |||||||||||||    
T  17021835 ttgtacgtgaaaatgcttctgactgacagtttctatttttctttaacttaatgtaacctcccaa-tattacttaactcctcataaactctattaattcta 17021737  T
Q  120 atttaaatccccaaactccaaa 141  Q
    ||||||  ||| ||||||||||    
T  17021736 atttaacccccaaaactccaaa 17021715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 18820064 - 18820112
Alignment:
Q  98 cctcttaattctattaattctaatttaaatcccc-aaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18820064 cctcttaattctattaattctaa-ttaaatccccaaaactccaaaataat 18820112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 21830689 - 21830733
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  21830689 cttaattctattaattctaa-ttaactccccaaactccaaaataat 21830733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 42961852 - 42961894
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  42961852 cttattctattaaataatgaaaataaccatttaataaaataca 42961894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 23443213 - 23443168
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||  | |||| ||||||||||||||||||||    
T  23443213 cttaattctattaattcctaattaactccccaaactccaaaataat 23443168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 428370 - 428422
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  428370 aactccccttaattctattaattcataattaactccccaacctccaaaataat 428422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 9777314 - 9777366
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  9777314 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 9777366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 19512601 - 19512653
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  19512601 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 19512653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 28369894 - 28369842
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  28369894 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 28369842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 3e-91; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 4830079 - 4829894
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4830079 aacctctgtttgtacgtgaaactggttctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 4829980  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  4829979 ttctaatttaaatccccaaactccaaaataattctattactccacttattctattaaataatgaaaatagccattaataaaataca 4829894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 4833374 - 4833189
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4833374 aacctctgtttgtacgtgaaactggttctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 4833275  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  4833274 ttctaatttaaatccccaaactccaaaataattctattactccacttattctattaaataatgaaaatagccattaataaaataca 4833189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 24046401 - 24046215
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24046401 aacctctgtttgtacgtgaaactggttatgactctcagtttctatttttccaacctattgtaacctccaaaatattcttaactcctcttaattctattaa 24046302  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  24046301 ttctaatttaaatccccaaactccaaaataattctatttctccacttattctattaaataataaaaatagccatttaataaaataca 24046215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 15747472 - 15747292
Alignment:
Q  21 tgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaa 120  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15747472 tgtttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaa 15747373  T
Q  121 tttaaatccccaaactccaaaataattcta-tttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  15747372 tttaaatccccaaactccaaaataattttattttctccacttattctattaaataatgaaaataaccattaatgaaataca 15747292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 13447684 - 13447844
Alignment:
Q  23 tttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaata-ttcttaactcctcttaa-ttctattaattctaa 120  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  13447684 tttgtacgtaaaactgattctgactctcagtttctattttcccaacctattgtaacctcccaaatatttcttaactcctcttaatttctattaattccaa 13447783  T
Q  121 tttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||  || ||||||||  ||||||||||||||||   ||||||||||||||||| ||||||    
T  13447784 tttaa--cctcaaactccttaataattctatttctcacattattctattaaataataaaaata 13447844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 4828554 - 4828434
Alignment:
Q  79 ctcccaaatattcttaactcctcttaatt-ctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatg 177  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||  || ||||||||  |||||||||||||||||||||||||||||||||||||    
T  4828554 ctcccaaatattcttaactcctcttaatttctattaattccaatttaa--cctcaaactccttaataattctatttctccgcttattctattaaataatg 4828457  T
Q  178 aaaatagccattaataaaataca 200  Q
    |||||||||||||||||||||||    
T  4828456 aaaatagccattaataaaataca 4828434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 2584062 - 2583902
Alignment:
Q  23 tttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaata-ttcttaactcctcttaa-ttctattaattctaa 120  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  2584062 tttgtacgtaaaactgattctgactctcagtttctattttcccaacctattgtaacctcccaaatatttcttaactcctcttaatttctattaattccaa 2583963  T
Q  121 tttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||  || |||||| |  ||||||||||||||||   |||||||| |||||||| ||||||    
T  2583962 tttaa--cctcaaacttcttaataattctatttctcacattattctaataaataataaaaata 2583902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 13043636 - 13043528
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaataatgaaaatagcca-t 188  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||| | ||||||| |||||||||| |||||||||| |    
T  13043636 cttaactcctcttaattctattaattctaatttaa--ccccaaactccaaaataattcctaattct-cacttattccattaaataataaaaatagccatt 13043540  T
Q  189 taataaaataca 200  Q
    ||||||||||||    
T  13043539 taataaaataca 13043528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 18214018 - 18214090
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  18214018 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 18214090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 28386435 - 28386545
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||||||     
T  28386435 cttaactcctcttaattctattaaattctaattt-aatccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaatagccat 28386532  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  28386533 ttaataaaataca 28386545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 53386761 - 53386651
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| || || |||| | |||||||||||||||| | ||||||||||     
T  53386761 cttaactcctcttaattctattaaattctaattt-aatccccaaactccaaaataaatcataattct-cacttattctattaaatactaaaaatagccat 53386664  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  53386663 ttaataaaataca 53386651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 2757579 - 2757651
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  2757579 cccacactccaaaatgattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 2757651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 10314743 - 10314853
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||||||     
T  10314743 cttaactcctcttaattctattaaattctaattt-aacccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaatagccat 10314840  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  10314841 ttaataaaataca 10314853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 41792721 - 41792831
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||||||||||| ||| ||| |||||| |||||||||||||||| | ||||||||||     
T  41792721 cttaactcctcttaattctattaaattccaattt-aacccccaaactccaaaataaatcctaattctcc-cttattctattaaatactaaaaatagccat 41792818  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  41792819 ttaataaaataca 41792831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 49011307 - 49011367
Alignment:
Q  206 accacagacagaagaa-cgaagccatatatcccacataaaatgtgacatattctagctact 265  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  49011307 accacagacagaagaaacgaagccatatatcccacataaaatttgacatattctagctact 49011367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 200
Target Start/End: Complemental strand, 9333398 - 9333286
Alignment:
Q  89 ttcttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcc 186  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | |||||||||    
T  9333398 ttcttaattcctcttaattctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagcc 9333301  T
Q  187 a-ttaataaaataca 200  Q
    | |||||||||||||    
T  9333300 atttaataaaataca 9333286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 200
Target Start/End: Complemental strand, 9387181 - 9387069
Alignment:
Q  89 ttcttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcc 186  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | |||||||||    
T  9387181 ttcttaattcctcttaattctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagcc 9387084  T
Q  187 a-ttaataaaataca 200  Q
    | |||||||||||||    
T  9387083 atttaataaaataca 9387069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 14699753 - 14699863
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | ||||||||||     
T  14699753 cttaactcctcttatttctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagccat 14699850  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  14699851 ttaataaaataca 14699863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 14036007 - 14036048
Alignment:
Q  159 cttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14036007 cttattctattaaataatgaaaatagccattaataaaataca 14036048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 15712555 - 15712445
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||| ||     
T  15712555 cttaactcctcttaattctattaaattatagttt-aatccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaatagtcat 15712458  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  15712457 ttaataaaataca 15712445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 15408345 - 15408407
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||| |||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||    
T  15408345 aactccccttaattctattaattcttaattaactccccacactccaaaataactctatttctc 15408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 1101633 - 1101534
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaat--aattctatttctccgcttattctattaaataatgaaaatagcca 187  Q
    ||||||||||||||||||||| || |||||||||||  |||||||||||||||   ||| ||| |||||  |||||||||||||||| | ||||||||||    
T  1101633 cttaactcctcttaattctataaaattctaatttaac-ccccaaactccaaaaataaatcctaattctca-cttattctattaaatactaaaaatagcca 1101536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 14822542 - 14822590
Alignment:
Q  98 cctcttaattctattaattctaatttaaatcccc-aaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  14822542 cctcttaattctattaattctaa-ttaaatccccaaaactccaaaataat 14822590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 14486883 - 14486951
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctatt 169  Q
    |||||||||||||||||  | |||| |||||| |||||||||||| ||||||||||   ||||||||||    
T  14486883 cttaattctattaattcccaattaactccccatactccaaaataactctatttctcatattattctatt 14486951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 15535330 - 15535382
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||| | |||| ||||||| ||||||||||||    
T  15535330 aactccccttaattctattaattcttaattaactccccaacctccaaaataat 15535382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 32490998 - 32491040
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  32490998 cttattctattaaataataaaaatagccatttaataaaataca 32491040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 8835101 - 8835169
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattcta 167  Q
    ||||||||||| ||||||||||| |||||||| | ||||||||||||||  || |||||  |||||||||    
T  8835101 cctcttaattccattaattctaa-ttaaatcctctaactccaaaataataataattctcaccttattcta 8835169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 15447173 - 15447132
Alignment:
Q  159 cttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||| ||||| | ||||||||    
T  15447173 cttattctattaaataatgaaaataaccatttaaaaaataca 15447132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 18230988 - 18231056
Alignment:
Q  132 aaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||  ||||||| |||||  |||||||||||||||||| ||||||| || |||||||||||||    
T  18230988 aaactccaaataaattctaattctca-cttattctattaaataataaaaatagtcatttaataaaataca 18231056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 13511294 - 13511254
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaata 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  13511294 cttattctattaaataatgaaaataaccatttaataaaata 13511254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 14555064 - 14555012
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  14555064 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 14555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 49546788 - 49546736
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  49546788 aactccccttaattctattaattcctaattaactccccaatctccaaaataat 49546736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 53904340 - 53904288
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  53904340 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 53904288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 34958698 - 34958877
Alignment:
Q  21 tgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaa 120  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34958698 tgtttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaa 34958797  T
Q  121 tttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  34958798 tttaaatccccaaactccaaaataattctatttctccacttattctattaaataatgaaaatagtcattaataaaataca 34958877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 831547 - 831370
Alignment:
Q  23 tttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaatt 122  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  831547 tttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaatt 831448  T
Q  123 taaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  831447 taaattcccaaacttcaaaataattctatttatccacttattctattaaataatgaaaatagccattaataaaataca 831370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 1196727 - 1196550
Alignment:
Q  23 tttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaatt 122  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1196727 tttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaatt 1196628  T
Q  123 taaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  1196627 taaattcccaaacttcaaaataattctatttatccacttattctattaaataatgaaaatagccattaataaaataca 1196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 11662236 - 11662422
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11662236 aacctctgtttgtacgtgaaactggttctaactctcagtttctatttttccaacctattgtaacctccaaaatattcttaactcctcttaattctattaa 11662335  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||    
T  11662336 ttctaatttaaatccccaaactccaaaataattctatttctccacttattctattaaataataaaaatagtcatttaataaaataca 11662422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 13256824 - 13257000
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||         ||||    
T  13256824 aacctctgtttgtacgtgaaactggttctgactcttagtttctatttttccaacctattgtaacctctcaaatattcttaactcctc---------ttaa 13256914  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13256915 ttctaatttaaatccacaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccaataataaaataca 13257000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 3288694 - 3288535
Alignment:
Q  23 tttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaata-ttcttaactcctcttaa-ttctattaattctaa 120  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  3288694 tttgtacgtaaaactgattctgactctcagtttctattttcccaacctattgtaacctcccaaatatttcttaactcctcttaatttctattaattccaa 3288595  T
Q  121 tttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||  || ||||||||  ||||| ||||||||||   ||||||||||||||||| ||||||    
T  3288594 tttaa--cctcaaactccttaataa-tctatttctcacattattctattaaataataaaaata 3288535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 35367258 - 35367381
Alignment:
Q  75 taacctcccaaatatt-cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaat 173  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| | |||||||||||||||    
T  35367258 taacctccc-aatattccttaactcctcttaattctattaattctaatttaa--ccccaaactccaaaatagttctaattct-cacttattctattaaat 35367353  T
Q  174 aatgaaaatagcca-ttaataaaataca 200  Q
    ||| |||||||||| |||||||||||||    
T  35367354 aataaaaatagccatttaataaaataca 35367381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 16922049 - 16921925
Alignment:
Q  75 taacctcccaaatatt-cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  16922049 taacctccc-aatattccttaactcctcttaattctattaattctgatttaa--ccccaaactccaaaataattcctaattct-cacttattctattaaa 16921954  T
Q  173 taatgaaaatagcca-ttaataaaataca 200  Q
    |||| ||||||| || |||||||||||||    
T  16921953 taataaaaatagtcatttaataaaataca 16921925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 16929142 - 16929018
Alignment:
Q  75 taacctcccaaatattctt-aactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaa 172  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  16929142 taacctcccaa-tattctttaactcctcttaattctattaattctgatttaa--ccccaaactccaaaataattcctaattct-cacttattctattaaa 16929047  T
Q  173 taatgaaaatagcca-ttaataaaataca 200  Q
    |||| ||||| |||| |||||||||||||    
T  16929046 taataaaaatggccatttaataaaataca 16929018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 10895587 - 10895514
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  10895587 ccccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 10895514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 16009835 - 16009908
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  16009835 ccccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 16009908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 13394536 - 13394426
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||||||     
T  13394536 cttaactcctcttaattctattaaattctaattt-aatccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaatagccat 13394439  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  13394438 ttaataaaataca 13394426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 15168441 - 15168514
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  15168441 ccccacactccaaaataattctatttatccacttattctattaaataatgaaaataaccatttaataaaataca 15168514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 18873608 - 18873680
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  18873608 cccacactctaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 18873680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 148885 - 148947
Alignment:
Q  139 aaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  148885 aaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 148947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 14113584 - 14113656
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| |||||||||||||    
T  14113584 cccacactccaaaataattctatttctccacttattttattaaataataaaaataaccatttaataaaataca 14113656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 14423235 - 14423307
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| |||||||||||||    
T  14423235 cccacactccaaaataattctatttctccacttattttattaaataataaaaataaccatttaataaaataca 14423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 15691147 - 15691228
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactcc-aaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   ||||||||||||||| | ||||||    
T  15691147 cttaattctattaattcttatttaa--ccccaaactcccaaaataattctatttctcacattattctattaaatactaaaaata 15691228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 15698740 - 15698821
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactcc-aaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   ||||||||||||||| | ||||||    
T  15698740 cttaattctattaattcttatttaa--ccccaaactcccaaaataattctatttctcacattattctattaaatactaaaaata 15698821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 16475116 - 16475069
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16475116 cctcttaattctattaattctaattt-aatccccaaactccaaaataat 16475069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 19153037 - 19153084
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19153037 cctcttaattctattaattctaa-ttaaatccccaaactccaaaataat 19153084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 20752436 - 20752483
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20752436 cctcttaattctattaattctaa-ttaaatccccaaactccaaaataat 20752483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 21064272 - 21064184
Alignment:
Q  111 ttaattctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||  |||||||||||||| |||||| || |||||  |||||||||||||||||| |||||||||| |||||||||||||    
T  21064272 ttaattctaatttaa--ccccaaactccaaactaattcctaattctca-cttattctattaaataataaaaatagccatttaataaaataca 21064184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 41285222 - 41285332
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||| |||| |  |||||| |||||||| | ||||||| ||     
T  41285222 cttaactcctcttaattctattaaattctaattt-aatccccaaactccaaaataaatcctaattct-catttattccattaaatactaaaaatagtcat 41285319  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  41285320 ttaataaaataca 41285332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 41780924 - 41780838
Alignment:
Q  59 tttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| ||| ||||| ||||||| || || |||||| ||| || |||||||||||||||||||| |||| |||||||||||||||||    
T  41780924 tttttctaacttattgcaacctcctaattactcttaattccactaaattctattaattctaattt-aatctccaaactccaaaataat 41780838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 14249514 - 14249470
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14249514 cttaattctattaattctaattt-aatccccaaactccaaaataat 14249470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 14264984 - 14264940
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14264984 cttaattctattaattctaattt-aatccccaaactccaaaataat 14264940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 19146716 - 19146763
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  19146716 cctcttaattctattaattctaa-ttaaatccccaaacttcaaaataat 19146763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 20746115 - 20746162
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  20746115 cctcttaattctattaattctaa-ttaaatccccaaacttcaaaataat 20746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 21518161 - 21518079
Alignment:
Q  91 cttaactcct-cttaattctattaattctaatttaaatccccaaactcc-aaaataattctatttctccgcttattctattaaat 173  Q
    |||||||||| |||||||||||||||||| ||||||  ||| ||||||| ||||||||||||||||||   |||||||| |||||    
T  21518161 cttaactcctacttaattctattaattcttatttaa--ccctaaactcctaaaataattctatttctcacattattctaataaat 21518079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 46347740 - 46347696
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  46347740 cttaattctattaattctaa-ttaactccccaaactccaaaataat 46347696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 14188091 - 14188061
Alignment:
Q  159 cttattctattaaataatgaaaatagccatt 189  Q
    |||||||||||||||||||||||||||||||    
T  14188091 cttattctattaaataatgaaaatagccatt 14188061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 14190680 - 14190650
Alignment:
Q  159 cttattctattaaataatgaaaatagccatt 189  Q
    |||||||||||||||||||||||||||||||    
T  14190680 cttattctattaaataatgaaaatagccatt 14190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 14567504 - 14567546
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  14567504 cttattctattaaataatgaaaataaccatttaataaaataca 14567546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 11304398 - 11304450
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  11304398 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 11304450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 13679701 - 13679757
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaact-ccaaaataattctatttctc 156  Q
    |||||||||||||||||| | |||| |||||| ||| ||||||||| ||||||||||    
T  13679701 cttaattctattaattcttaattaactccccacactcccaaaataactctatttctc 13679757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 16184447 - 16184395
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||| |||||||||| ||  | |||| ||||||||||||||||||||    
T  16184447 aactcctcttcattctattaaatcctaattaactccccaaactccaaaataat 16184395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 23663966 - 23663914
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  23663966 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 23663914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 46626170 - 46626222
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||||  | |||| ||||||| ||| ||||||||    
T  46626170 aactcctcttaattctattaattcctaattaactccccaacctctaaaataat 46626222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 147752 - 147937
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  147752 aacctctgtttgtacgtgaaactggctctgactcttagtttctatttttccaacctattgtaacctcacaaatattcttaactcctcttaattctattaa 147851  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  147852 ttctaatttaaatccccaaactccaaaataattctatttctacacttattctattaaataatgaaaatagccattaataaaataca 147937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 29415478 - 29415292
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaatt-ctatta 113  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29415478 aacctctgtttgtacgtgaaactggttctgacacttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaatttctatta 29415379  T
Q  114 attctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29415378 attctaatttaaatccccaaactccaaaataattatatttctccgcttattctatttaataatgaaaatagccattaataaaataca 29415292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 2286573 - 2286501
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  2286573 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 2286501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 23839448 - 23839520
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  23839448 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 23839520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 23058193 - 23058265
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  23058193 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataatcatttaataaaataca 23058265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 21347064 - 21347126
Alignment:
Q  139 aaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  21347064 aaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 21347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 22593331 - 22593439
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||||||||||| ||| ||| |||||| |||||||||||||||| | ||||||||||     
T  22593331 cttaactcctcttaattctattaaattccaattt-aacccccaaactccaaaataaatcctaattctcc-cttattctattaaatactaaaaatagccat 22593428  T
Q  188 ttaataaaata 198  Q
    |||||||||||    
T  22593429 ttaataaaata 22593439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 21470982 - 21471063
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||  ||||||||| |||||||||||||||| | ||||||    
T  21470982 cttaattctattaattataatataac-ccccaaactccaaaataatcttatttctccacttattctattaaatattaaaaata 21471063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 9187710 - 9187771
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttct 155  Q
    |||||| |||||||||||||||||  | |||| |||||| ||||||||||||||||||||||    
T  9187710 aactccccttaattctattaattcctaattaactccccacactccaaaataattctatttct 9187771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 25773745 - 25773844
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgctta-ttctattaaataatgaaaat-agccattaataaaata 198  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| | | |||| | |||| |||||||||||||| ||||| |||  |||||||||||    
T  25773745 cttaattccattaattctaatttaa-tccccaaactccaaaataataccaattct-cacttatttctattaaataataaaaataagcatttaataaaata 25773842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 10985911 - 10985843
Alignment:
Q  134 actccaaaataattctatttctccgcttattct-attaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||||||| ||| |||||||||||||    
T  10985911 actccaaaataattctatttctcatattattctaattaaataatgaaaataaccatttaataaaataca 10985843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 14615281 - 14615229
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||| |||||| ||||||||||||||||||||    
T  14615281 aactccccttaattctattaaatcttatttaactccccaaactccaaaataat 14615229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 23106389 - 23106458
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaa 171  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||  || |||||   ||||||||||||    
T  23106389 cttaattctattaattctaa-ttaaatccccaaattccaaaataataataattctcgcattattctattaa 23106458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 25348702 - 25348757
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  25348702 cttaactccccttaattctattaattcctaattaactccccaacctccaaaataat 25348757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 4478160 - 4478202
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  4478160 cttattctattaaataatgaaaataaccatttaataaaataca 4478202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 21477482 - 21477562
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||||||||||||| |||| |||  ||||||||| ||||||| | |||||||| | |||||||||||||||| | ||||||    
T  21477482 cttaattctattaattataatataac-ccccaaacttcaaaata-tcctatttcttcacttattctattaaatattaaaaata 21477562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 25598916 - 25598958
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  25598916 cttattctattaaataatgaaaataaccatttaataaaataca 25598958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 14132078 - 14132034
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||    
T  14132078 cttaattctattaattctaa-ttaactccccaacctccaaaataat 14132034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 23232412 - 23232368
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||    
T  23232412 cttaattctcttaattctaatt-aactccccaaactccaaaataat 23232368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 24512664 - 24512631
Alignment:
Q  122 ttaaatccccaaactccaaaataattctatttct 155  Q
    |||| |||||||||||||||||||||||||||||    
T  24512664 ttaactccccaaactccaaaataattctatttct 24512631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 9184839 - 9184774
Alignment:
Q  91 cttaactcctcttaat-tctattaattctaatttaaatccccaaact-ccaaaataattctatttctc 156  Q
    ||||||||||| |||  |||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  9184839 cttaactcctcataaactctattaattctaatttaa--ccccaaactcccaaactaattctatttctc 9184774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 25397388 - 25397440
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  25397388 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 25397440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 28288346 - 28288294
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  28288346 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 28288294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 391461 - 391647
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctccc-aaatattcttaactcctcttaattctatta 113  Q
    ||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  391461 aacctctgtttatacgtgaaactggttcagactcttagtttctatttttccaacctattgtaacctccccaaatattcttaactcctcttaattctatta 391560  T
Q  114 attctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  391561 attctaatttaaatcctcaaactccaaaataattctatttctccacttattctattaaataatgaaaatagccattaataaaataca 391647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 6e-80; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 10953581 - 10953395
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10953581 aacctgtgtttgtacgtgaaactggttctgactctcaatttctatttttacaacctattgtaacctccaaaatattcttaactcctcttaattctattaa 10953482  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  10953481 ttctaatttaaatctccaaactccaaaataattctatttctccacttattctattaaataatgaaaatagccatttaataaaataca 10953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 10952652 - 10952466
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10952652 aacctgtatttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctccaaaatattcttaactcctcttaattctattaa 10952553  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  10952552 ttctaatttaaattcccatactccaaaataattctatttctccacttattctattaaataatgaaaatagtcatttaataaaataca 10952466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 18893812 - 18894009
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttt-----------tccaacctattgtaacctcccaaatattcttaactcctctt 103  Q
    ||||| |||||||||||||||||  |||||||||| ||||||||||||           |||||||||||||||||||| ||||||||||||||||||||    
T  18893812 aacctctgtttgtacgtgaaactagttctgactctcagtttctattttttttttttttttccaacctattgtaacctccaaaatattcttaactcctctt 18893911  T
Q  104 aattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18893912 aattctattaattctaatttaaatcctcaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccatttaataaaataca 18894009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 18898105 - 18898304
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctat-----------ttttccaacctattgtaacctcccaaatattcttaactcctctt 103  Q
    ||||| |||||||||||||||||| |||||||||| | |||||||           ||||||||||||||||||||||| ||||||||||||||||||||    
T  18898105 aacctctgtttgtacgtgaaactgtttctgactctcaatttctatattttttttctttttccaacctattgtaacctccaaaatattcttaactcctctt 18898204  T
Q  104 aattctattaattctaatttaaatccccaaactccaaaataattctatttctccgctta--ttctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||||||    
T  18898205 aattctattaattctaatttaaatccccaaactccaaaataattctatttctccacttattttctattaaataatgaaaatagccatttaataaaataca 18898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 34851216 - 34851038
Alignment:
Q  23 tttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatatt-cttaactcctcttaa-ttctattaattctaa 120  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||    
T  34851216 tttgtacgtaaaactgattctgaccctcagtttctattttcccaacctattgtaacctcccaaatattccttaactcctcttaatttctattaattccaa 34851117  T
Q  121 tttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaat-agccattaataaaataca 200  Q
    |||||  || ||||||||  ||||||| ||||||||   ||||||||||||||||| ||||| |  |||||||||||||||    
T  34851116 tttaa--cctcaaactccttaataattatatttctcacattattctattaaataataaaaataaatcattaataaaataca 34851038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 14646878 - 14646778
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaatac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| || ||||||||||||    
T  14646878 cttaattctattaattctaatttaaatccccaaactccaaaataactctatttctccacttattctattaaataatacaaatagtcatttaataaaatac 14646779  T
Q  200 a 200  Q
    |    
T  14646778 a 14646778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 10988695 - 10988583
Alignment:
Q  75 taacctcccaaatatt-cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  10988695 taacctccc-aatattccttaactcctcttaattctattaattctaatttaa--ccccaaactccaaaataattcctaattct-cacttattctattaaa 10988600  T
Q  173 taatgaaaatagccatt 189  Q
    |||| ||||||||||||    
T  10988599 taataaaaatagccatt 10988583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 10833222 - 10833155
Alignment:
Q  21 tgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaata 88  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  10833222 tgtttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctccaaaata 10833155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 10833164 - 10833098
Alignment:
Q  135 ctccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  10833164 ctccaaaataattctatttctccacttattctattaaataatgaaaatagccatttaataaaataca 10833098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 14762547 - 14762474
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  14762547 ccccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 14762474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 38310605 - 38310533
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  38310605 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 38310533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 20247597 - 20247525
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | | |||||||||||||    
T  20247597 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataacaatttaataaaataca 20247525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 23370293 - 23370221
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  23370293 cccacactctaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 23370221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 16801282 - 16801349
Alignment:
Q  134 actccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||    
T  16801282 actccaaaataattctatttctccacttattctattaaataataaaaatagtcatttaataaaataca 16801349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 35985841 - 35985900
Alignment:
Q  87 tattcttaactcc-tcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  35985841 tattcttaactccctcttaattctattaattctaattt-aatccccaaactccaaaataat 35985900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 53225879 - 53225989
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||| ||||| || ||||||||| |||||| ||| ||| |||||| |||||||||||||||| | ||||||||||     
T  53225879 cttaactcctcttaattctattaaattccaattt-aacccccaaacttcaaaataaatcctaattctcc-cttattctattaaatactaaaaatagccat 53225976  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  53225977 ttaataaaataca 53225989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 14288026 - 14287979
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14288026 cctcttaattctattaattctaattt-aatccccaaactccaaaataat 14287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 19444819 - 19444898
Alignment:
Q  122 ttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| ||||| |||| |||||||| ||||||||||| ||||||||||||||||||  |||||| || |||||||||||||    
T  19444819 ttaactcccctaacttcaaaataactctatttctccacttattctattaaataatacaaatagtcatttaataaaataca 19444898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 19451430 - 19451537
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaat 192  Q
    |||||| |||||||||| ||| ||  | |||| ||||| |||| |||||||| ||||||||| | ||||||||||||||||||  |||||| || |||||    
T  19451430 aactccccttaattctaataaatcctaattaactcccctaacttcaaaataactctatttcttcacttattctattaaataatacaaatagacatttaat 19451529  T
Q  193 aaaataca 200  Q
    ||||||||    
T  19451530 aaaataca 19451537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 13062540 - 13062587
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  13062540 cctcttaattctattaattttaattt-aatccccaaactccaaaataat 13062587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 24283510 - 24283389
Alignment:
Q  27 tacgtgaaactgattctgactcttagtttctattt--ttccaacctattgtaacctcccaaatatt-cttaactcctcttaat-tctattaattctaatt 122  Q
    |||||||||||| ||||||||   | |||||||||  ||  ||| || ||||||||||||| |||| ||||||||||| |||  ||||||||||||||||    
T  24283510 tacgtgaaactgcttctgactgacaatttctatttatttttaacttaatgtaacctcccaa-tattacttaactcctcataaactctattaattctaatt 24283412  T
Q  123 taaatccccaaactccaaaataat 146  Q
    ||| ||||||||||||||||||||    
T  24283411 taa-tccccaaactccaaaataat 24283389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 42110379 - 42110426
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  42110379 cctcttaattctattaattctaa-ttaaatcctcaaactccaaaataat 42110426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 11643794 - 11643750
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  11643794 cttaattctattaattctaa-ttaactccccaaactccaaaataat 11643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 17497373 - 17497417
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  17497373 cttaattctattaattctaa-ttaactccccaaactccaaaataat 17497417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 11304765 - 11304713
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||||||||||||||||    
T  11304765 aactccccttaattctattaattcctaattaactccccaaactccaaaataat 11304713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 12478702 - 12478650
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||| ||  | |||| ||||||||||||||||||||    
T  12478702 aactcctcttaattctattaaatcctaattaactccccaaactccaaaataat 12478650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 13693106 - 13693157
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||||| |||| ||||||| ||||||||||||    
T  13693106 aactccccttaattctattaattctaa-ttaactccccaacctccaaaataat 13693157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 17240347 - 17240292
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||||||||||| ||  | |||| |||||| |||||||||||||||||||||||    
T  17240347 cttaattctattaactcctaattaactccccacactccaaaataattctatttctc 17240292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 12536733 - 12536679
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  12536733 ttaactccccttaattctattaattcctaattaactccccaacctccaaaataat 12536679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 14543340 - 14543286
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||| |||||||  | |||| ||||||| ||||||||||||    
T  14543340 ttaactcctcttaattctcttaattcctaattaattccccaacctccaaaataat 14543286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 54974473 - 54974545
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||   ||| |||||||||  |||||||||||||||| | |||||||||| |||||||||||||    
T  54974473 ccccaaactccaattaaatcctatttctca-cttattctattaaatactaaaaatagccatttaataaaataca 54974545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 54977083 - 54977155
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||   ||| |||||||||  |||||||||||||||| | |||||||||| |||||||||||||    
T  54977083 ccccaaactccaattaaatcctatttctca-cttattctattaaatactaaaaatagccatttaataaaataca 54977155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 54979693 - 54979765
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||   ||| |||||||||  |||||||||||||||| | |||||||||| |||||||||||||    
T  54979693 ccccaaactccaattaaatcctatttctca-cttattctattaaatactaaaaatagccatttaataaaataca 54979765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 9534543 - 9534595
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  9534543 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 9534595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 12154038 - 12154090
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  12154038 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 12154090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 12364563 - 12364615
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  12364563 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 12364615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 54042694 - 54042781
Alignment:
Q  111 ttaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaata 198  Q
    |||||||| || |||  ||| |||||||||   |||||||||||||  |||||||||||||||||| ||||||| || |||||||||||    
T  54042694 ttaattctcatataacccccaaaactccaattaaattctatttctca-cttattctattaaataataaaaatagtcatttaataaaata 54042781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 54521971 - 54522023
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  54521971 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 54522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 41300851 - 41300666
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41300851 aacctctgtttgtacgtgaaactggttcttactctcagtttctatttttccaatctattgtaacctcccaaatattcttaactcctcttaattctattaa 41300752  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaataca 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  41300751 ttctaatttaaatccccaaactccaaaaaaattctatttctccaattattctattaaataatgaaaatagtcattaataaaataca 41300666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 21072610 - 21072424
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21072610 aacctctgtttgtatgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctccaaaatattcttaactcctcttaattctattaa 21072511  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  21072510 ttctagtttaaatccccaaactccaaaataattatatttctccacttattctattaaataatgaaaataatcatttaataaaataca 21072424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 44090051 - 44089961
Alignment:
Q  106 ttctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccattaataaaata 198  Q
    |||||||||||| |||||||  || ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44090051 ttctattaattccaatttaa--cctcaaactccttaataattctatttctccacttattctattaaataatgaaaatagccattaataaaata 44089961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 28350360 - 28350468
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaataatgaaaatagcca-t 188  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||| |||| | |||||||||||||||||| |||||||||| |    
T  28350360 cttaactcctcttaattctattaattctaatttaa--ccccaaacttcaaaataattcctaattct-cacttattctattaaataataaaaatagccatt 28350456  T
Q  189 taataaaataca 200  Q
    ||||||||||||    
T  28350457 taataaaataca 28350468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 19661245 - 19661172
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  19661245 ccccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 19661172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 9243213 - 9243285
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  9243213 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 9243285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 21238177 - 21238067
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||||||||||| ||| ||| |||||| |||||||||||||||| | ||||||||||     
T  21238177 cttaactcctcttaattctattaaattccaattt-aacccccaaactccaaaataaatcctaattctcc-cttattctattaaatactaaaaatagccat 21238080  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  21238079 ttaataaaataca 21238067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 21240727 - 21240617
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||||||||||| ||| ||| |||||| |||||||||||||||| | ||||||||||     
T  21240727 cttaactcctcttaattctattaaattccaattt-aacccccaaactccaaaataaatcctaattctcc-cttattctattaaatactaaaaatagccat 21240630  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  21240629 ttaataaaataca 21240617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 6259961 - 6259899
Alignment:
Q  139 aaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  6259961 aaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 6259899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 31504646 - 31504756
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | ||||||||||     
T  31504646 cttaactcctcttatttctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagccat 31504743  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  31504744 ttaataaaataca 31504756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 31507212 - 31507322
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | ||||||||||     
T  31507212 cttaactcctcttatttctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagccat 31507309  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  31507310 ttaataaaataca 31507322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 37380697 - 37380807
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || || |||||   ||||||||||||||| | ||||||| ||     
T  37380697 cttaactcctcttaattctattaaattctaatttaa-tccccaaactccaaaataaatcctaattctcat-ttattctattaaatactaaaaatagtcat 37380794  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  37380795 ttaataaaataca 37380807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 17635079 - 17635126
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17635079 cctcttaaatctattaattctaatt-aaatccccaaactccaaaataat 17635126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 25351574 - 25351527
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  25351574 cctcttaattctattaattctaattt-aatctccaaactccaaaataat 25351527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 10683776 - 10683724
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||| | |||| ||||||| ||||||||||||    
T  10683776 aactccccttaattctattaattcttaattaactccccaacctccaaaataat 10683724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 21120594 - 21120555
Alignment:
Q  106 ttctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  21120594 ttctattaattctaatttaa-tccccaaactccaaaataat 21120555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 23265362 - 23265417
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||||||||||||| | | |||| |||||| |||||||||||| ||||||||||    
T  23265362 cttaattctattaattattaattaactccccacactccaaaataactctatttctc 23265417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 23280430 - 23280485
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||||||||||||| | | |||| |||||| |||||||||||| ||||||||||    
T  23280430 cttaattctattaattattaattaactccccacactccaaaataactctatttctc 23280485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 19036671 - 19036725
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  19036671 ttaactccccttaattctattaattcctaattaactccccaacctccaaaataat 19036725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 19664843 - 19664801
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  19664843 cttattctattaaataatgaaaataaccatttaataaaataca 19664801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 21908574 - 21908636
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||| |||||||||||||| ||  | |||| |||||| |||||||||||| ||||||||||    
T  21908574 aactccccttaattctattaaatcctaattaactccccacactccaaaataactctatttctc 21908636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22842140 - 22842191
Alignment:
Q  104 aattctattaattctaatttaaatccccaaactcc-aaaataattctatttctc 156  Q
    ||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||    
T  22842140 aattctattaattcttatttaa--ccccaaactcctaaaataattctatttctc 22842191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 24272811 - 24272769
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  24272811 cttattctattaaataataaaaatagccatttaataaaataca 24272769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 6483934 - 6483986
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  6483934 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 6483986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 6487401 - 6487453
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  6487401 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 6487453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 12626959 - 12626872
Alignment:
Q  111 ttaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaata 198  Q
    |||||||| || |||  ||| |||||||||   |||||||||||||  |||||||||||||||||| ||||||| || |||||||||||    
T  12626959 ttaattctcatataacccccaaaactccaattaaattctatttctca-cttattctattaaataataaaaatagtcatttaataaaata 12626872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 24653509 - 24653561
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  24653509 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 24653561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 24659995 - 24660047
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  24659995 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 24660047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 25106452 - 25106400
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  25106452 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 25106400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 22 - 199
Alignment:
Q  15 aacctgtgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaa 114  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||    
T  22 aacctctgtttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctccaaaatattcttaactcctc---------ttaa 112  T
Q  115 ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  113 ttctaatttaaatccccaaactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 28313484 - 28313655
Alignment:
Q  21 tgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaa 120  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||         ||||||    
T  28313484 tgtttgtacgtgaaactggttctgactctcagtttctatttttccaacctattgtaacctccaaaacattcttaactcctcttaa---------ttctaa 28313574  T
Q  121 tttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  28313575 tttaaatcctcaaactccaaaataattctatttctccacttattctattaaataatgaaaatagccatttaataaaataca 28313655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 16373213 - 16373285
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  16373213 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 16373285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 20436832 - 20436760
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||    
T  20436832 cccacactccaaaataattctatttctccacttattctataaaataatgaaaataaccatttaataaaataca 20436760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 21985908 - 21985836
Alignment:
Q  73 tgtaacctcccaaatattcttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  21985908 tgtaacctcccaattacacttaactccacttaattctattaattctaattt-aatccccaaactctaaaataat 21985836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 20580513 - 20580622
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||| ||||||||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | ||||||||||     
T  20580513 cttaactcttcttaattctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagccat 20580610  T
Q  188 ttaataaaatac 199  Q
    ||||||||||||    
T  20580611 ttaataaaatac 20580622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 38183955 - 38184014
Alignment:
Q  206 accacagacagaagaacgaagccatatatcccacataaaatgtgacatattctagctact 265  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||    
T  38183955 accacagacagaagaaagaaacaatatatcccacataaaatgtgacacattctagctact 38184014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 14431423 - 14431325
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagccat 188  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||| ||| |||| | |||||||||||||||| | |||||| ||||    
T  14431423 cttaactcctcttaattctattaaattctaattt-aacccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaataaccat 14431326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 18713013 - 18713075
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||| |||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||    
T  18713013 aactccccttaattctattaattcttaattaactccccacactccaaaataactctatttctc 18713075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 21733402 - 21733355
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  21733402 cctcttaattctattaattttaatt-aaatccccaaactccaaaataat 21733355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 21180068 - 21180026
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  21180068 cttattctattaaataatgaaaatagccatttaataaaataca 21180026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 32651787 - 32651849
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||| |||||||||||||||| | | |||| |||||| |||||||||||| ||||||||||    
T  32651787 aactccccttaattctattaattattaattaattccccacactccaaaataactctatttctc 32651849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 5381818 - 5381864
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  5381818 cctcttaattctattaattctaatttaa--tcccaaactccaaaataat 5381864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 19665704 - 19665660
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  19665704 cttaattctattaattctaa-ttaactccccaaactccaaaataat 19665660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 23194358 - 23194303
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  23194358 cttaactccccttaattctattaattcctaattaactccccaacctccaaaataat 23194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 22219724 - 22219766
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  22219724 cttattctattaaataatgaaaataaccatttaataaaataca 22219766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 44433117 - 44433225
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaataatgaaaatagcca-t 188  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||| | |||||||||||||||||| |||||||||| |    
T  44433117 cttaactcctcttaattctattaattctaatttaa--ccccaaactccaaaataattcctaattct-cacttattctattaaataataaaaatagccatt 44433213  T
Q  189 taataaaataca 200  Q
    ||||||||||||    
T  44433214 taataaaataca 44433225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 8727542 - 8727470
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  8727542 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 8727470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 7300135 - 7300025
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||||||||| || || |||||  |||||||||||||||| | ||||||||||     
T  7300135 cttaactcctcttatttctattaaattctaatttaac-ccccaaactccaaaataaatcctaattctca-cttattctattaaatactaaaaatagccat 7300038  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  7300037 ttaataaaataca 7300025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 21931905 - 21931952
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21931905 cctcttaattctattaattctaa-ttaaatccccaaactccaaaataat 21931952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 19750771 - 19750828
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  19750771 cctctcaattctattaattctaatt-aaatccccacactccaaaataactctatttctc 19750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 17615965 - 17616075
Alignment:
Q  91 cttaactcctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca- 187  Q
    |||||||||||||| ||||||||| |||| ||||||  |||||| ||||||||||| || || |||||  |||||||||||||||| | ||||||||||     
T  17615965 cttaactcctcttatttctattaaattctgatttaac-ccccaatctccaaaataaatcctaattctca-cttattctattaaatactaaaaatagccat 17616062  T
Q  188 ttaataaaataca 200  Q
    |||||||||||||    
T  17616063 ttaataaaataca 17616075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 22744897 - 22744944
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  22744897 cctcttaattctattaattctaa-ttaaatccccaacctccaaaataat 22744944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 33090070 - 33090112
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaa 141  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  33090070 cctcttaattctattaattctaa-ttaaatccccaaactccaaa 33090112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 19883211 - 19883253
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  19883211 cttattctattaaataatgaaaatagccatttaataaaataca 19883253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 20004693 - 20004646
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  20004693 cctcttaattatattaattctaatt-aaatccccaacctccaaaataat 20004646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 25623644 - 25623597
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||    
T  25623644 cctcttaattctattaattctaa-ttaaatccctagactccaaaataat 25623597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 20257989 - 20257943
Alignment:
Q  101 cttaattctattaattc-taatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||    
T  20257989 cttaattctattaaatcctaatttaactccccaaactccaaaataat 20257943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 25657302 - 25657260
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||||||||||| || |||||||||||||    
T  25657302 cttattctattaaataatgaaaatagtcatttaataaaataca 25657260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 27940622 - 27940580
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  27940622 cttattctattaaataatgaaaataaccatttaataaaataca 27940580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 36444738 - 36444694
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  36444738 cttaattctattaattctaa-ttaactccccgaactccaaaataat 36444694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 10833954 - 10833867
Alignment:
Q  111 ttaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaata 198  Q
    |||||||| || |||  ||| |||||||||   |||||||||||||  |||||||||||||||||| ||||||| || |||||||||||    
T  10833954 ttaattctcatataacccccaaaactccaattaaattctatttctca-cttattctattaaataataaaaatagtcatttaataaaata 10833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 21299152 - 21299100
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  21299152 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 21299100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 38184548 - 38184501
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  38184548 cctcttaattctattaattataa-ttaaacccccaacctccaaaataat 38184501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 4928 - 5052
Alignment:
Q  75 taacctcccaaatatt-cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaa 172  Q
    ||||||||| |||||| |||||||||||||||||| || |||||||||||||  |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  4928 taacctccc-aatattccttaactcctcttaattccataaattctaatttaa--ccccaaactccaaaataattcctaattct-ctcttattctattaaa 5023  T
Q  173 taatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||| |||||||||||||    
T  5024 taataaaaatagccatttaataaaataca 5052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 15688 - 15615
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  15688 ccccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 7672 - 7745
Alignment:
Q  128 ccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  7672 ccccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 7745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 15581 - 15509
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  15581 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 15509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 10507 - 10579
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  10507 cccacactccaaaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 10579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 163519 - 163625
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataa-ttctatttctccgcttattctattaaataatgaaaatagcca-t 188  Q
    |||||||||| | ||||||||||||||||||||||  |||||||||||||||||| ||||| |||| | |||||||||||||||||| ||||||| || |    
T  163519 cttaactcctttaaattctattaattctaatttaa--ccccaaactccaaaataatttctaattct-cacttattctattaaataataaaaatagtcatt 163615  T
Q  189 taataaaata 198  Q
    ||||||||||    
T  163616 taataaaata 163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 12648 - 12576
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  12648 cccacactccaaaataattctatttttccacttattctattaaataatgaaaataaccatttaataaaataca 12576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 4146 - 4255
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataatt-ctatttctccgcttattctattaaataatgaaaatagcca-t 188  Q
    |||||||||||||||||| ||  |||||||||| || |||||||||||||||||||| ||| |||| | |||||||||||||||||| ||||||| || |    
T  4146 cttaactcctcttaattccatagattctaattt-aacccccaaactccaaaataattcctaattct-cacttattctattaaataataaaaatagtcatt 4243  T
Q  189 taataaaataca 200  Q
    ||||||||||||    
T  4244 taataaaataca 4255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 34702 - 34763
Alignment:
Q  140 aaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  34702 aaataattctatttctccacttattctattaaataatgaaaataaccatttaataaaataca 34763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 135655 - 135720
Alignment:
Q  91 cttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    ||||||||| |||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||    
T  135655 cttaactccccttaattctattaattcttaattaactccccacactccaaaataactctatttctc 135720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 13799 - 13846
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13799 cctcttaattctattaattctaattt-aatccccaaactccaaaataat 13846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 8575 - 8503
Alignment:
Q  129 cccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||| |||||||||||| | ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  8575 cccacactccaaaataactatatttctccacttattctattaaataatgaaaataaccatttaataaaataca 8503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 54005 - 54091
Alignment:
Q  59 tttttccaacctattgtaacctcccaaatattcttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| ||| ||||| ||||||| || | ||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  54005 tttttctaacttattgcaacctcctaatttttcttaactccacttaactcttttaattctaattt-aatccccaaactccaaaataat 54091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 9972 - 9910
Alignment:
Q  139 aaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  9972 aaaataattatatttctccacttattctattaaataatgaaaataaccatttaataaaataca 9910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 1302 - 1240
Alignment:
Q  139 aaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  1302 aaaataattatatttctccacttattctattaaataatgaaaataaccatttaataaaataca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 3465 - 3424
Alignment:
Q  159 cttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3465 cttattctattaaataatgaaaatagccattaataaaataca 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 11425 - 11384
Alignment:
Q  159 cttattctattaaataatgaaaatagccattaataaaataca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11425 cttattctattaaataatgaaaatagccattaataaaataca 11384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 3956 - 4037
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactcc-aaaataattctatttctccgcttattctattaaataatgaaaata 183  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   ||||||||||||||| | ||||||    
T  3956 cttaattctattaattcttatttaa--ccccaaactcccaaaataattctatttctcacattattctattaaatactaaaaata 4037  T

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Target: scaffold0309 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 9345 - 9392
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9345 cctcttaattctattaattctaa-ttaaatccccaaactccaaaataat 9392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 5763 - 5716
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5763 cctcttaattctattaattctaattt-aatccccaaactccaaaataat 5716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 2019 - 1979
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaata 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  2019 cttattctattaaataatgaaaataaccatttaataaaata 1979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 13615 - 13662
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13615 cctcttaattctattaattctaa-ttaaatccccaaactccaaaataat 13662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 724 - 771
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  724 cctcttaattctattaattctaattt-aatccccaaactccaaaataat 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 82 - 148
Alignment:
Q  134 actccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||| |||||||||||||    
T  82 actccaaaataattctatttatccacttattctattaaataatg-aaataaccatttaataaaataca 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 40651 - 40597
Alignment:
Q  92 ttaactcc-tcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  40651 ttaactccatcttaattctattaattctaatt-aaatccccaaactccaaaataat 40597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 29146 - 29219
Alignment:
Q  128 ccccaaactccaaaataattc-tatttctccgcttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||| || |||||  |||||||||||||||||| |||||||||| |||||||||||||    
T  29146 ccccaaactccaaaataattcctaattctca-cttattctattaaataataaaaatagccatttaataaaataca 29219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 20673 - 20563
Alignment:
Q  73 tgtaacctcccaaatatt-cttaactcctcttaat-tctattaattctaatttaaatccccaaactccaaaa-taattctatttctccgcttattctatt 169  Q
    ||||||||||||| |||| ||||||||||| |||  |||||||||||||||||||  ||||||||||| ||| ||||||||||||||   ||||||||||    
T  20673 tgtaacctcccaa-tattacttaactcctcataaactctattaattctaatttaa--ccccaaactcccaaactaattctatttctcacattattctatt 20577  T
Q  170 aaataatgaaaata 183  Q
    ||||| | ||||||    
T  20576 aaatactaaaaata 20563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 253013 - 253064
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  253013 aactccccttaattctattaattctaa-ttaactccccaaactccaaaataat 253064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 259619 - 259670
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  259619 aactccccttaattctattaattctaa-ttaactccccaaactccaaaataat 259670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 148143 - 148187
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  148143 cttaattctattaattctaa-ttaactccccaaactccaaaataat 148187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 155296 - 155340
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  155296 cttaattctattaattctaa-ttaactccccgaactccaaaataat 155340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 812 - 919
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-tta 190  Q
    |||||||| |||||||||||||||||| ||||||  | | ||||| |||   ||| ||| |||||  ||||||||||||||||||||||||||||| |||    
T  812 ttaactccccttaattctattaattctcatttaac-cacaaaactacaattaaatcctaattctca-cttattctattaaataatgaaaatagccattta 909  T
Q  191 ataaaataca 200  Q
    ||||||||||    
T  910 ataaaataca 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 15822 - 15715
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-tta 190  Q
    |||||||| |||||||||||||||||| ||||||  | | ||||| |||   ||| ||| |||||  ||||||||||||||||||||||||||||| |||    
T  15822 ttaactccccttaattctattaattctcatttaac-ctcaaaacttcaattaaatcctaattctca-cttattctattaaataatgaaaatagccattta 15725  T
Q  191 ataaaataca 200  Q
    ||||||||||    
T  15724 ataaaataca 15715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 222036 - 221929
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagcca-tta 190  Q
    |||||||| |||||||||||||||| | |||||| |||  |||||||||   ||| |||  ||||  ||||||||||||||||||||||||||||| |||    
T  222036 ttaactccccttaattctattaattttcatttaactcca-aaactccaattaaatcctaactctca-cttattctattaaataatgaaaatagccattta 221939  T
Q  191 ataaaataca 200  Q
    ||||||||||    
T  221938 ataaaataca 221929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 746 - 698
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  746 cctcttaattctattaattataatttaatcccccaaactccaaaataat 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 6090 - 6137
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6090 cctcttaattctattaattctaa-ttaaattcccaaactccaaaataat 6137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 8212 - 8165
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  8212 cctcttaattctattaattctaattt-aatccctaaactccaaaataat 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 768 - 721
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  768 cctcttaattctattaattctaattt-aatccccaaagtccaaaataat 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 27491 - 27538
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27491 cctcttaattctattaattctaa-ttaaatccccaaactccaacataat 27538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 1910 - 1863
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1910 cctcttaattctattaattctaattt-aatccccaaattccaaaataat 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 27067 - 27111
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||    
T  27067 cttaattctattaactctaatt-aactccccaaactccaaaataat 27111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 71748 - 71795
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  71748 cctcttaattctattaattataattt-aatccccaaactccaaaataat 71795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 2768 - 2721
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  2768 cctcttaattctattaattctaattt-aatacccaaactccaaaataat 2721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 2268 - 2315
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2268 cctctaaattctattaattctaatt-aaatccccaaactccaaaataat 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 91590 - 91543
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  91590 cctcttaattttattaattctaattt-aatccccaaactccaaaataat 91543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 36748 - 36795
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36748 cctcttaattctattaattctaattt-aatccgcaaactccaaaataat 36795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 143856 - 143899
Alignment:
Q  102 ttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  143856 ttaattctattaattctaattt-aatccccaaattccaaaataat 143899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 123914 - 123867
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  123914 cctcttaattctattaattctagttt-aatccccaaactccaaaataat 123867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 5617 - 5663
Alignment:
Q  99 ctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5617 ctcttaattctattaattctaattt-aatcctcaaactccaaaataat 5663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 13632 - 13678
Alignment:
Q  99 ctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  13632 ctcttaattctattaattctaattt-aatcccctaactccaaaataat 13678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 24186 - 24233
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  24186 cctcttaattctattaattctaattt-aatcccctaaccccaaaataat 24233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 106505 - 106614
Alignment:
Q  92 ttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaatagccatt 189  Q
    ||||||||||||||||||||| ||||| ||||| || ||||||||| |||||| ||| ||| |||| | |||||||||||||||| | ||||||| ||||    
T  106505 ttaactcctcttaattctattaaattccaattt-aacccccaaacttcaaaataaatcctaattct-cacttattctattaaatactaaaaatagtcatt 106602  T
Q  190 -aataaaataca 200  Q
     |||||||||||    
T  106603 caataaaataca 106614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 17034 - 17096
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||| |||||||||||||||| | | |||| |||||| |||||||||||| ||||||||||    
T  17034 aactccccttaattctattaattattaattaactccccacactccaaaataactctatttctc 17096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 22124 - 22166
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  22124 cttattctattaaataatgaaaatagccatttaataaaataca 22166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 46839 - 46787
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttc 154  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||| ||||||    
T  46839 cttaattctattaattctaa-ttaactccccaaattccaaaataattttatttc 46787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 17167 - 17119
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaa-ctccaaaataat 146  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  17167 cctcttaattctattaattctaatt-aaatccccaaaactccaaaataat 17119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 1584 - 1636
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||||||||||| ||||||||||||    
T  1584 aactccccttaattctattaattcctaattaaatccccaacctccaaaataat 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 78933 - 78881
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||||||||||||||||    
T  78933 aactccccttaattctattaattcctaattaactccccaaactccaaaataat 78881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 45721 - 45674
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||| |||||||||||| |||||||||||| || |||||||||    
T  45721 cctcttaattatattaattctaa-ttaaatccccaaccttcaaaataat 45674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 71892 - 71845
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||  ||||||||    
T  71892 cctcttaattctattaattctaa-ttaaatccccaacctttaaaataat 71845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 26625 - 26671
Alignment:
Q  99 ctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||    
T  26625 ctcttaattctattaattctaattt-aatctctaaactccaaaataat 26671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 13853 - 13908
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    |||||||||||||| ||  | |||| |||||| |||||||||||||||||||||||    
T  13853 cttaattctattaactcctaattaactccccacactccaaaataattctatttctc 13908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 2764 - 2818
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaataa 145  Q
    ||||||||||||||||| |||| ||||||||||| || ||||||||||||||||||    
T  2764 cttaactcctcttaattatattaaattctaattt-aacccccaaactccaaaataa 2818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 531 - 351
Alignment:
Q  21 tgtttgtacgtgaaactgattctgactcttagtttctatttttccaacctattgtaacctcccaa-atattcttaactcct-cttaattctattaattct 118  Q
    |||||||| ||||||||| ||||||||||||| ||||| |||||  |   |   ||||||||||| || |  ||||||||  ||||||||  ||||||||    
T  531 tgtttgtatgtgaaactgcttctgactcttaggttctaattttctcagtaaacataacctcccaatatctaattaactcccacttaattcatttaattct 432  T
Q  119 aatttaaatccccaaactccaaaataattctatttctccgcttattctattaaataatgaaaatagccat-taataaaataca 200  Q
     ||||||  ||| ||||||||||  ||||||| |||||  |||||||||||||||||| ||||||  ||| ||||||||||||    
T  431 tatttaac-cccaaaactccaaataaattctaattctca-cttattctattaaataataaaaataatcatctaataaaataca 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 6882 - 6790
Alignment:
Q  91 cttaactcctcttaattctatt-aattctaatttaaatccccaaactccaaaat-aattctatttctccgcttattctattaaataatgaaaata 183  Q
    ||||||||||||||||| |||| |||| |||||| || |||||||||||||||| ||| ||| |||| | |||||||||||||||| | ||||||    
T  6882 cttaactcctcttaattatattaaattataattt-aacccccaaactccaaaataaatcctaattct-cacttattctattaaatactaaaaata 6790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 1854 - 1800
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  1854 ttaactccccttaattctattaattcctaattaactccccaacctccaaaataat 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 23504 - 23462
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  23504 cttattctattaaataataaaaatagccatttaataaaataca 23462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 7166 - 7223
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataattctatttctc 156  Q
    ||||||||||||||||||| |||| |||  ||| ||||||| |||||||||||||||||    
T  7166 cctcttaattctattaattataatataacccccaaaactcc-aaataattctatttctc 7223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 33026 - 33068
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  33026 cttattctattaaataatgaaaataaccatttaataaaataca 33068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 26765 - 26817
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  26765 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 26817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 10358 - 10400
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  10358 cttattctattaaataataaaaatagccatttaataaaataca 10400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 4152 - 4194
Alignment:
Q  159 cttattctattaaataatgaaaatagcca-ttaataaaataca 200  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  4152 cttattctattaaataataaaaatagccatttaataaaataca 4194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 30984 - 31038
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  30984 ttaactccccttaattctattaattcctaattaactccccaacctccaaaataat 31038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 46580 - 46526
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||| |||||||  | |||| ||||||| ||||||||||||    
T  46580 ttaactcctcttaattctcttaattcctaattaattccccaacctccaaaataat 46526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 55595 - 55541
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||| |||||||  | |||| ||||||| ||||||||||||    
T  55595 ttaactcctcttaattctcttaattcctaattaattccccaacctccaaaataat 55541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 61981 - 61927
Alignment:
Q  92 ttaactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||||| |||||||  | |||| ||||||| ||||||||||||    
T  61981 ttaactcctcttaattctcttaattcctaattaattccccaacctccaaaataat 61927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 14000 - 14073
Alignment:
Q  98 cctcttaattctattaa-ttctaatttaaatccccaaactccaaaataattctatttctccgcttattctattaa 171  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||  || |||||   ||||||||||||    
T  14000 cctcttaattctattaatttctaa-ttaaatccccaacctccaaaataataataattctcacattattctattaa 14073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 37658 - 37612
Alignment:
Q  101 cttaattctattaattc-taatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||    
T  37658 cttaattctattaaatcctaatttaactccccaaactccaaaataat 37612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 135718 - 135672
Alignment:
Q  101 cttaattctattaattc-taatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||    
T  135718 cttaattctattaaatcctaatttaactccccaaactccaaaataat 135672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 22413 - 22380
Alignment:
Q  122 ttaaatccccaaactccaaaataattctatttct 155  Q
    |||| |||||||||||||||||||||||||||||    
T  22413 ttaactccccaaactccaaaataattctatttct 22380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 28425 - 28470
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||||||||||||||| || |||| ||||||| ||||||||||||    
T  28425 cttaattctattaattccaaattaactccccaacctccaaaataat 28470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 21752 - 21707
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||| | | |||||||||||| ||||||||||||    
T  21752 cttaattctattaatttttaattaaatccccaacctccaaaataat 21707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 25949 - 25904
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||||||||||||| | | |||||||||||| ||||||||||||    
T  25949 cttaattctattaatttttaattaaatccccaacctccaaaataat 25904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 1005 - 1057
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  1005 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 6711 - 6763
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  6711 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 6763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 3993 - 3941
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  3993 aactccccttaattctattaattcccaattaactccccaacctccaaaataat 3941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 12674 - 12622
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  12674 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 12622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 1594 - 1650
Alignment:
Q  101 cttaattctattaattctaatttaaatccccaaact-ccaaaataattctatttctc 156  Q
    |||||||||||||||||| | |||| |||||| ||| ||||||||| ||||||||||    
T  1594 cttaattctattaattcttaattaactccccacactcccaaaataactctatttctc 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 11322 - 11270
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||| ||  | |||| ||||||||||||||||||||    
T  11322 aactccccttaattctattaaatcctaattaactccccaaactccaaaataat 11270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 17427 - 17375
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  17427 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 17375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 12515 - 12562
Alignment:
Q  98 cctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    ||||| ||||||||||||||||| |||||||| ||||||| ||||||||    
T  12515 cctctaaattctattaattctaa-ttaaatcctcaaactcgaaaataat 12562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 61050 - 61102
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  61050 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 11592 - 11644
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  11592 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 11644  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 127912 - 127964
Alignment:
Q  94 aactcctcttaattctattaattctaatttaaatccccaaactccaaaataat 146  Q
    |||||| |||||||||||||||||  | |||| ||||||| ||||||||||||    
T  127912 aactccccttaattctattaattcctaattaactccccaacctccaaaataat 127964  T

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