View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1262-Insertion-7 (Length: 674)
Name: NF1262-Insertion-7
Description: NF1262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1262-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 632; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 632; E-Value: 0
Query Start/End: Original strand, 7 - 674
Target Start/End: Original strand, 14758672 - 14759339
Alignment:
| Q |
7 |
actaagatctacaggaaatgtttaatatagttaacatgattgccaataatattgtaaatccttttaaggatgtaaaaataagtatatacccctataattg |
106 |
Q |
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| T |
14758672 |
actaagatctacaggaaatgtttgatatagttaacatgattgccaataatattgtaaatccttttaaggatgtaaaaataagtatatacctctataattg |
14758771 |
T |
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| Q |
107 |
ttttaatttcgctaacttcttgtgctgcatcctccgcagacctgtatttatttttctcattttgcagttctacgtaccacttaatcaaatctcgttgctt |
206 |
Q |
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| T |
14758772 |
ttttaatttcgctaacttcttgcgctgcatcctccgcagacctgtatttatttttctcattttgcagttctacgtaccacttaatcaaatctcgttgctt |
14758871 |
T |
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| Q |
207 |
cattccggacaaaccagttcctgcaacacaatgcctcagaaaattcacctttcaatatgtgatcacattcgacacttggtagtatccctgacaaaatatt |
306 |
Q |
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| T |
14758872 |
cattccggacaaaccagttcctgcaatacaatgccgcagaaaattcacctttcaatatgtgatcacattcgacacttggtagtatccctgacaaaatatt |
14758971 |
T |
|
| Q |
307 |
catataaataaatcttatctacatcagagacaatggtatgcaagtttcagaacctgaatagtatggtatggaattaatttttacaatgtacaataattaa |
406 |
Q |
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| T |
14758972 |
catataaataaatcttatctacatcagagacaatggtaggcaagtttcagaacctgaatagtatggtatggaattaatttttacaatgtacaataattaa |
14759071 |
T |
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| Q |
407 |
actttgaagtataatataacatatgatcgtatatattattaccttcttgcacctcagtctcttcgttctgtctaaggcgctccacgttctcttcgtgctg |
506 |
Q |
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| T |
14759072 |
actatgaagtataatataacatatgatcatatatattattaccttcttgcacctcagtctcttcgttctgtctaaggcgctccacgttctcttcgtgctg |
14759171 |
T |
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| Q |
507 |
tctaaggcgcactacaagggccctagtaatcttctgaaatttttcatagcttatagtaattttcttcccttgggggtaagatccatcatctgctggactt |
606 |
Q |
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| T |
14759172 |
tctaaggtgcactacaagggccctagtaatcttctgaaatttttcatagcttatagtaattttcttcccttgggggtaagatccatcatctgctggactt |
14759271 |
T |
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| Q |
607 |
tctgcaaggtaattacactaataaataattagtgtaattatttaacatcagcatcttcattattatca |
674 |
Q |
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| T |
14759272 |
tctgcaaggtaattacactaataaataattagtgtaattatttaacatcagcatcttcattattatca |
14759339 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 37645554 - 37645615
Alignment:
| Q |
148 |
ctgtatttatttttctcattttgcagttctacgtaccacttaatcaaatctcgttgcttcat |
209 |
Q |
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| T |
37645554 |
ctgtaattatttttctcattttgctggtctacataccatttaatcaaatcccgttgcttcat |
37645615 |
T |
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