View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12620_low_12 (Length: 316)
Name: NF12620_low_12
Description: NF12620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12620_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 14 - 307
Target Start/End: Complemental strand, 7735056 - 7734763
Alignment:
| Q |
14 |
agaagaattaggaaatcttctaaggacagagtggccatctctaatatttaagttaagttttccctctaactatattattcaagagaagtgaagaacatcg |
113 |
Q |
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| T |
7735056 |
agaagaattaggaaatcttctaaggacagagtggccatctctaatatttaagttaagttttccctctaacaatattattcaagagaagtgaagaacatcg |
7734957 |
T |
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| Q |
114 |
taaaaaattacttacaggtgtaaaatatgatcaccaacggtcaaaatcttgtccatgagagcacccttcatttcctcgcgggcctcgggcaaatatctaa |
213 |
Q |
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| T |
7734956 |
taaaaaattacttacaggtgtaaaatatgatcaccaacggtcagaatcttgtccatgagagcacccttcatttcctcgcgggcctcgggcaaatatctaa |
7734857 |
T |
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| Q |
214 |
gcacaagtactagatgtgcaccaaatcgtatcatctgaggatctccatgaggcctgtaagaggcacaaaaaatgtttgtcaactgatgtccatc |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7734856 |
gcacaagtactagatgtgcaccaaatcgtatcatctgaggatctccatgaggcctgtaagaggcacaaaaaatgtttgtcaactgatttccatc |
7734763 |
T |
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