View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12620_low_15 (Length: 265)

Name: NF12620_low_15
Description: NF12620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12620_low_15
NF12620_low_15
[»] chr5 (19 HSPs)
chr5 (1-87)||(17875923-17876009)
chr5 (1-84)||(31456717-31456800)
chr5 (152-229)||(30138059-30138136)
chr5 (152-237)||(31456850-31456935)
chr5 (152-227)||(17876093-17876168)
chr5 (5-87)||(30138183-30138265)
chr5 (152-237)||(36508710-36508795)
chr5 (193-265)||(7484933-7485005)
chr5 (5-80)||(21504009-21504084)
chr5 (193-265)||(21300093-21300165)
chr5 (5-85)||(36508845-36508925)
chr5 (197-265)||(19921573-19921641)
chr5 (193-264)||(21405678-21405750)
chr5 (196-264)||(21617979-21618047)
chr5 (5-71)||(265908-265973)
chr5 (5-71)||(17011598-17011663)
chr5 (5-71)||(29448710-29448775)
chr5 (194-237)||(31251968-31252011)
chr5 (224-265)||(20566508-20566549)
[»] chr1 (28 HSPs)
chr1 (1-87)||(44822230-44822316)
chr1 (152-237)||(44822098-44822183)
chr1 (153-245)||(7051991-7052083)
chr1 (152-245)||(24723420-24723513)
chr1 (5-78)||(21188142-21188215)
chr1 (193-265)||(19676642-19676714)
chr1 (193-265)||(21046098-21046170)
chr1 (193-265)||(42912980-42913052)
chr1 (178-264)||(7320644-7320730)
chr1 (9-87)||(22350543-22350621)
chr1 (193-265)||(16058363-16058434)
chr1 (193-265)||(20633680-20633755)
chr1 (178-237)||(51324420-51324479)
chr1 (4-87)||(20708160-20708243)
chr1 (193-264)||(22350647-22350718)
chr1 (5-71)||(46197862-46197927)
chr1 (5-74)||(7702983-7703052)
chr1 (5-85)||(7052115-7052195)
chr1 (208-264)||(13302847-13302903)
chr1 (4-87)||(22823311-22823394)
chr1 (4-87)||(39061188-39061271)
chr1 (5-71)||(29763749-29763814)
chr1 (5-71)||(50001346-50001411)
chr1 (193-225)||(8276079-8276111)
chr1 (193-225)||(38056762-38056794)
chr1 (5-87)||(24723560-24723642)
chr1 (193-225)||(4595935-4595967)
chr1 (35-71)||(34392666-34392702)
[»] chr7 (49 HSPs)
chr7 (5-87)||(14274093-14274175)
chr7 (152-234)||(14274222-14274304)
chr7 (1-74)||(42565945-42566018)
chr7 (152-237)||(47974897-47974982)
chr7 (153-221)||(708523-708591)
chr7 (193-265)||(12465309-12465381)
chr7 (193-265)||(13147521-13147593)
chr7 (193-265)||(12127212-12127284)
chr7 (193-265)||(20214078-20214150)
chr7 (193-265)||(20620217-20620289)
chr7 (1-84)||(33060305-33060388)
chr7 (178-264)||(15095687-15095773)
chr7 (178-264)||(15140129-15140215)
chr7 (193-265)||(8851208-8851280)
chr7 (193-265)||(11067399-11067471)
chr7 (193-265)||(12322979-12323051)
chr7 (193-265)||(12372205-12372277)
chr7 (193-265)||(14180447-14180519)
chr7 (193-265)||(32433638-32433710)
chr7 (193-265)||(8135286-8135358)
chr7 (193-265)||(10277258-10277330)
chr7 (193-265)||(13132370-13132442)
chr7 (185-265)||(15623942-15624022)
chr7 (193-265)||(46386137-46386209)
chr7 (4-87)||(21661124-21661207)
chr7 (194-264)||(12557853-12557923)
chr7 (5-87)||(47974991-47975073)
chr7 (5-85)||(12754767-12754847)
chr7 (193-248)||(48807392-48807447)
chr7 (193-251)||(13698702-13698760)
chr7 (5-71)||(32160317-32160382)
chr7 (179-233)||(33002078-33002132)
chr7 (193-265)||(16999364-16999437)
chr7 (39-75)||(37539352-37539388)
chr7 (194-237)||(41284963-41285006)
chr7 (202-264)||(14218946-14219008)
chr7 (5-71)||(16550119-16550184)
chr7 (5-71)||(16615478-16615543)
chr7 (202-248)||(35771508-35771554)
chr7 (193-264)||(11054643-11054715)
chr7 (39-87)||(19195096-19195144)
chr7 (193-265)||(20586283-20586355)
chr7 (193-265)||(24269996-24270068)
chr7 (202-248)||(4071759-4071805)
chr7 (5-71)||(13315197-13315263)
chr7 (5-78)||(708630-708703)
chr7 (179-220)||(17070384-17070425)
chr7 (193-237)||(19486039-19486084)
chr7 (193-265)||(25943049-25943121)
[»] chr2 (45 HSPs)
chr2 (1-87)||(24884227-24884313)
chr2 (1-87)||(22501726-22501812)
chr2 (1-87)||(22509660-22509746)
chr2 (152-237)||(357771-357856)
chr2 (152-237)||(1383620-1383705)
chr2 (1-78)||(45535792-45535869)
chr2 (1-78)||(19647100-19647177)
chr2 (152-227)||(24884360-24884435)
chr2 (193-265)||(5031178-5031250)
chr2 (193-265)||(9975860-9975932)
chr2 (193-265)||(17307417-17307489)
chr2 (193-265)||(22251497-22251569)
chr2 (9-87)||(18388337-18388415)
chr2 (153-256)||(22501860-22501964)
chr2 (153-256)||(22509794-22509898)
chr2 (193-265)||(24516117-24516189)
chr2 (193-265)||(27484526-27484598)
chr2 (193-265)||(40912251-40912323)
chr2 (1-65)||(45535662-45535726)
chr2 (193-264)||(25142134-25142205)
chr2 (1-78)||(45528407-45528484)
chr2 (193-265)||(19201249-19201321)
chr2 (197-265)||(24436583-24436651)
chr2 (193-265)||(24780889-24780961)
chr2 (5-87)||(1383752-1383834)
chr2 (5-71)||(12626548-12626614)
chr2 (193-265)||(36841195-36841267)
chr2 (1-84)||(20006073-20006158)
chr2 (193-265)||(37270630-37270702)
chr2 (193-248)||(3539767-3539822)
chr2 (190-264)||(2523797-2523871)
chr2 (178-264)||(44072473-44072559)
chr2 (193-264)||(19358821-19358893)
chr2 (200-264)||(27852605-27852669)
chr2 (4-87)||(25584403-25584486)
chr2 (5-74)||(28652664-28652733)
chr2 (39-87)||(28345136-28345184)
chr2 (193-248)||(18388256-18388311)
chr2 (202-237)||(18390291-18390326)
chr2 (197-264)||(22259974-22260040)
chr2 (5-71)||(18358084-18358149)
chr2 (5-71)||(21081086-21081151)
chr2 (5-55)||(21915494-21915544)
chr2 (5-71)||(25184059-25184124)
chr2 (204-264)||(39683153-39683214)
[»] scaffold0156 (1 HSPs)
scaffold0156 (152-256)||(16494-16598)
[»] scaffold0230 (2 HSPs)
scaffold0230 (1-85)||(6896-6980)
scaffold0230 (152-237)||(6762-6847)
[»] scaffold0040 (1 HSPs)
scaffold0040 (153-237)||(106128-106212)
[»] chr6 (27 HSPs)
chr6 (1-85)||(18585545-18585629)
chr6 (193-265)||(7827903-7827975)
chr6 (193-265)||(23150336-23150408)
chr6 (172-237)||(18585715-18585780)
chr6 (1-78)||(18982278-18982355)
chr6 (193-265)||(15890761-15890833)
chr6 (197-265)||(19655280-19655348)
chr6 (193-265)||(27330030-27330102)
chr6 (193-265)||(27390770-27390842)
chr6 (3-74)||(18459174-18459245)
chr6 (197-265)||(18703503-18703571)
chr6 (197-265)||(18709438-18709506)
chr6 (4-87)||(3006974-3007057)
chr6 (197-264)||(27125527-27125594)
chr6 (178-227)||(28948490-28948539)
chr6 (196-264)||(18928614-18928682)
chr6 (196-264)||(19401028-19401096)
chr6 (39-87)||(35057448-35057496)
chr6 (43-86)||(13285656-13285699)
chr6 (214-265)||(24267801-24267852)
chr6 (20-74)||(24506228-24506282)
chr6 (5-71)||(29045134-29045200)
chr6 (197-234)||(23501606-23501643)
chr6 (4-80)||(31166088-31166164)
chr6 (5-71)||(15891686-15891751)
chr6 (5-71)||(15900771-15900836)
chr6 (204-264)||(26923709-26923770)
[»] chr8 (36 HSPs)
chr8 (1-87)||(20517156-20517242)
chr8 (1-87)||(22344989-22345075)
chr8 (1-87)||(22356649-22356735)
chr8 (1-78)||(20879339-20879416)
chr8 (193-265)||(5082261-5082333)
chr8 (197-265)||(5761469-5761537)
chr8 (193-265)||(6573105-6573177)
chr8 (193-265)||(19140696-19140768)
chr8 (193-265)||(20083687-20083759)
chr8 (9-87)||(42265656-42265734)
chr8 (193-265)||(42817956-42818028)
chr8 (193-265)||(6101802-6101874)
chr8 (1-65)||(21676713-21676777)
chr8 (176-264)||(22317961-22318049)
chr8 (193-265)||(37292636-37292708)
chr8 (5-68)||(22483650-22483713)
chr8 (193-265)||(6202707-6202779)
chr8 (193-248)||(31722560-31722615)
chr8 (193-264)||(42265559-42265630)
chr8 (5-71)||(25657631-25657696)
chr8 (197-265)||(39936056-39936127)
chr8 (199-261)||(20178581-20178644)
chr8 (178-237)||(22532209-22532268)
chr8 (178-237)||(22536894-22536953)
chr8 (36-87)||(36305743-36305794)
chr8 (197-248)||(39694343-39694394)
chr8 (193-248)||(45469286-45469341)
chr8 (5-71)||(16198706-16198771)
chr8 (5-70)||(23478952-23479016)
chr8 (193-264)||(3273820-3273892)
chr8 (193-225)||(20022122-20022154)
chr8 (36-87)||(22708425-22708476)
chr8 (5-71)||(19880693-19880758)
chr8 (5-71)||(22610382-22610448)
chr8 (5-71)||(26454576-26454641)
chr8 (36-84)||(21678947-21678995)
[»] scaffold0338 (1 HSPs)
scaffold0338 (152-229)||(127-204)
[»] scaffold0149 (3 HSPs)
scaffold0149 (152-237)||(21501-21586)
scaffold0149 (193-265)||(29622-29694)
scaffold0149 (5-87)||(21410-21492)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-80)||(16973-17052)
scaffold0021 (1-80)||(26504-26583)
[»] chr3 (45 HSPs)
chr3 (1-71)||(48631198-48631268)
chr3 (1-78)||(3160735-3160812)
chr3 (193-265)||(17044897-17044969)
chr3 (193-265)||(40807927-40807999)
chr3 (193-265)||(49900661-49900733)
chr3 (193-264)||(50348076-50348147)
chr3 (196-265)||(40812767-40812836)
chr3 (193-265)||(10563639-10563711)
chr3 (193-265)||(22306632-22306704)
chr3 (193-265)||(41172420-41172492)
chr3 (178-245)||(9510985-9511052)
chr3 (178-245)||(9518960-9519027)
chr3 (1-87)||(13522449-13522534)
chr3 (196-265)||(11259365-11259434)
chr3 (193-265)||(17518922-17518994)
chr3 (193-265)||(17533784-17533856)
chr3 (197-265)||(35064590-35064658)
chr3 (193-265)||(44274349-44274421)
chr3 (4-71)||(12155143-12155210)
chr3 (5-71)||(45803453-45803519)
chr3 (196-265)||(35354536-35354605)
chr3 (193-265)||(17047057-17047129)
chr3 (188-264)||(33565012-33565088)
chr3 (180-264)||(49968909-49968993)
chr3 (193-248)||(11563655-11563710)
chr3 (1-80)||(12151054-12151133)
chr3 (193-264)||(42324022-42324093)
chr3 (5-87)||(6805027-6805109)
chr3 (194-248)||(19568274-19568328)
chr3 (193-265)||(14508777-14508850)
chr3 (193-265)||(10311458-10311530)
chr3 (193-265)||(17539037-17539109)
chr3 (196-264)||(17694001-17694069)
chr3 (188-264)||(35960979-35961055)
chr3 (197-265)||(15931556-15931624)
chr3 (193-256)||(37038979-37039043)
chr3 (36-87)||(6003085-6003136)
chr3 (202-248)||(13185834-13185880)
chr3 (5-71)||(16979782-16979847)
chr3 (193-237)||(22146834-22146879)
chr3 (35-87)||(24177869-24177921)
chr3 (193-264)||(45530652-45530724)
chr3 (5-71)||(22652643-22652708)
chr3 (193-237)||(37641570-37641615)
chr3 (197-225)||(14641638-14641666)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-78)||(59764-59841)
[»] chr4 (26 HSPs)
chr4 (1-74)||(14477498-14477571)
chr4 (193-265)||(16998456-16998528)
chr4 (193-265)||(25091584-25091656)
chr4 (193-265)||(53630523-53630595)
chr4 (194-265)||(10356485-10356556)
chr4 (152-237)||(14549650-14549735)
chr4 (193-265)||(11425874-11425946)
chr4 (1-75)||(18462889-18462963)
chr4 (1-74)||(13164999-13165072)
chr4 (196-265)||(42875731-42875800)
chr4 (193-265)||(15115153-15115225)
chr4 (193-265)||(37019601-37019673)
chr4 (193-265)||(6633586-6633658)
chr4 (188-264)||(9924079-9924155)
chr4 (193-265)||(19610255-19610327)
chr4 (193-265)||(46001580-46001652)
chr4 (196-264)||(11478704-11478772)
chr4 (5-71)||(10694362-10694427)
chr4 (9-87)||(14353899-14353977)
chr4 (5-85)||(14549520-14549600)
chr4 (5-85)||(19434761-19434841)
chr4 (193-251)||(9870508-9870567)
chr4 (193-225)||(9638940-9638972)
chr4 (9-84)||(45314240-45314315)
chr4 (5-71)||(9622357-9622423)
chr4 (5-71)||(16296741-16296807)
[»] scaffold1283 (1 HSPs)
scaffold1283 (193-265)||(517-589)
[»] scaffold0207 (1 HSPs)
scaffold0207 (193-265)||(13441-13513)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-75)||(38554-38628)
[»] scaffold0217 (1 HSPs)
scaffold0217 (5-74)||(28584-28653)
[»] scaffold0007 (4 HSPs)
scaffold0007 (1-78)||(18969-19046)
scaffold0007 (9-85)||(158971-159047)
scaffold0007 (193-248)||(158888-158943)
scaffold0007 (45-87)||(16676-16718)
[»] scaffold1941 (1 HSPs)
scaffold1941 (193-265)||(69-141)
[»] scaffold0737 (1 HSPs)
scaffold0737 (193-265)||(4763-4835)
[»] scaffold0407 (1 HSPs)
scaffold0407 (193-265)||(11323-11395)
[»] scaffold0111 (2 HSPs)
scaffold0111 (193-265)||(12582-12654)
scaffold0111 (193-265)||(5314-5386)
[»] scaffold0077 (1 HSPs)
scaffold0077 (193-265)||(34270-34342)
[»] scaffold0064 (1 HSPs)
scaffold0064 (193-265)||(58677-58749)
[»] scaffold0026 (3 HSPs)
scaffold0026 (193-265)||(146654-146726)
scaffold0026 (5-87)||(21992-22074)
scaffold0026 (36-87)||(9926-9977)
[»] scaffold0004 (1 HSPs)
scaffold0004 (193-265)||(328339-328411)
[»] scaffold0001 (3 HSPs)
scaffold0001 (193-265)||(31925-31997)
scaffold0001 (193-265)||(37232-37304)
scaffold0001 (193-265)||(77618-77690)
[»] scaffold0180 (2 HSPs)
scaffold0180 (9-87)||(28476-28554)
scaffold0180 (193-248)||(28395-28450)
[»] scaffold0116 (2 HSPs)
scaffold0116 (9-87)||(35611-35689)
scaffold0116 (193-264)||(35514-35585)
[»] scaffold0113 (2 HSPs)
scaffold0113 (193-265)||(35423-35493)
scaffold0113 (5-67)||(35362-35424)
[»] scaffold1766 (1 HSPs)
scaffold1766 (197-265)||(745-813)
[»] scaffold1633 (1 HSPs)
scaffold1633 (193-265)||(1136-1208)
[»] scaffold0848 (1 HSPs)
scaffold0848 (180-264)||(2071-2155)
[»] scaffold0632 (1 HSPs)
scaffold0632 (193-265)||(1096-1168)
[»] scaffold0334 (1 HSPs)
scaffold0334 (193-265)||(449-521)
[»] scaffold0241 (2 HSPs)
scaffold0241 (193-265)||(3113-3185)
scaffold0241 (193-256)||(2495-2558)
[»] scaffold0080 (1 HSPs)
scaffold0080 (193-265)||(21842-21914)
[»] scaffold0037 (3 HSPs)
scaffold0037 (196-264)||(81501-81569)
scaffold0037 (193-264)||(113018-113089)
scaffold0037 (193-225)||(117890-117922)
[»] scaffold0020 (2 HSPs)
scaffold0020 (197-265)||(169048-169116)
scaffold0020 (193-265)||(143542-143614)
[»] scaffold1800 (1 HSPs)
scaffold1800 (1-84)||(472-557)
[»] scaffold0555 (1 HSPs)
scaffold0555 (5-87)||(8897-8979)
[»] scaffold0439 (3 HSPs)
scaffold0439 (5-87)||(12111-12192)
scaffold0439 (193-265)||(12325-12398)
scaffold0439 (152-185)||(12220-12253)
[»] scaffold0008 (1 HSPs)
scaffold0008 (178-264)||(135554-135640)
[»] scaffold0036 (1 HSPs)
scaffold0036 (201-265)||(78234-78298)
[»] scaffold0175 (1 HSPs)
scaffold0175 (178-264)||(8557-8644)
[»] scaffold0028 (1 HSPs)
scaffold0028 (193-264)||(3102-3173)
[»] scaffold0019 (1 HSPs)
scaffold0019 (210-265)||(24180-24235)
[»] scaffold1939 (1 HSPs)
scaffold1939 (9-71)||(1-63)
[»] scaffold0394 (1 HSPs)
scaffold0394 (1-74)||(7626-7699)
[»] scaffold0308 (2 HSPs)
scaffold0308 (11-87)||(13269-13345)
scaffold0308 (193-264)||(13371-13442)
[»] scaffold0462 (3 HSPs)
scaffold0462 (5-87)||(11093-11173)
scaffold0462 (39-87)||(1174-1222)
scaffold0462 (39-87)||(6680-6728)
[»] scaffold0083 (3 HSPs)
scaffold0083 (179-233)||(10834-10888)
scaffold0083 (5-71)||(1807-1872)
scaffold0083 (185-225)||(5124-5164)
[»] scaffold0017 (2 HSPs)
scaffold0017 (5-75)||(23483-23553)
scaffold0017 (4-87)||(26560-26643)
[»] scaffold0337 (1 HSPs)
scaffold0337 (5-78)||(3075-3148)
[»] scaffold0046 (1 HSPs)
scaffold0046 (5-70)||(21895-21959)
[»] scaffold0125 (1 HSPs)
scaffold0125 (3-87)||(18212-18296)
[»] scaffold0859 (1 HSPs)
scaffold0859 (197-264)||(4617-4684)
[»] scaffold0251 (1 HSPs)
scaffold0251 (197-264)||(20136-20202)
[»] scaffold0123 (1 HSPs)
scaffold0123 (193-251)||(7206-7265)
[»] scaffold0057 (1 HSPs)
scaffold0057 (8-71)||(69970-70032)
[»] scaffold0515 (1 HSPs)
scaffold0515 (17-71)||(4911-4964)
[»] scaffold0436 (1 HSPs)
scaffold0436 (5-71)||(8830-8895)
[»] scaffold0306 (1 HSPs)
scaffold0306 (17-71)||(4911-4964)
[»] scaffold0138 (1 HSPs)
scaffold0138 (5-71)||(20967-21032)
[»] scaffold0061 (2 HSPs)
scaffold0061 (5-71)||(14703-14768)
scaffold0061 (5-71)||(23761-23826)
[»] scaffold0034 (1 HSPs)
scaffold0034 (5-71)||(29333-29398)
[»] scaffold0165 (1 HSPs)
scaffold0165 (5-74)||(31800-31869)
[»] scaffold0802 (1 HSPs)
scaffold0802 (188-264)||(4760-4836)
[»] scaffold0328 (1 HSPs)
scaffold0328 (193-225)||(18731-18763)
[»] scaffold0220 (1 HSPs)
scaffold0220 (193-225)||(13879-13911)
[»] scaffold0213 (1 HSPs)
scaffold0213 (39-87)||(19019-19066)
[»] scaffold0174 (3 HSPs)
scaffold0174 (193-233)||(11321-11361)
scaffold0174 (196-265)||(19640-19709)
scaffold0174 (193-233)||(5201-5241)
[»] scaffold0628 (1 HSPs)
scaffold0628 (197-264)||(1109-1176)
[»] scaffold0594 (1 HSPs)
scaffold0594 (5-71)||(2110-2176)
[»] scaffold0035 (1 HSPs)
scaffold0035 (5-87)||(43888-43969)
[»] scaffold1434 (1 HSPs)
scaffold1434 (4-77)||(1470-1543)
[»] scaffold0056 (1 HSPs)
scaffold0056 (202-247)||(67060-67105)
[»] scaffold0379 (1 HSPs)
scaffold0379 (197-233)||(10741-10777)
[»] scaffold0074 (1 HSPs)
scaffold0074 (204-256)||(9049-9101)


Alignment Details
Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17875923 - 17876009
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17875923 attgttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 17876009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31456717 - 31456800
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaa 84  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  31456717 attgttattctacaacctgaacatcaattcatatgttaattcattgaattacctacactttcaacaatcaaattgcaattcaaa 31456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 30138136 - 30138059
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcc 229  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  30138136 attaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaatttcc 30138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 31456850 - 31456935
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  31456850 attaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatttccaaatttccaaaacta 31456935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 17876093 - 17876168
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaatt 227  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  17876093 attaacatcttaattccaacaatcaattctacaattaagacaaccaattacaacttctaaacctaattcccaaatt 17876168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30138265 - 30138183
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30138265 ttattctacaacctgaacatcatatcatatgttaattcattggattgcctacactttcaacaatcaaattgcaattcaaaacc 30138183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 36508795 - 36508710
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  36508795 attaacatcttaatttcatcaatcaattctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaacta 36508710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 7484933 - 7485005
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||||||||||||||    
T  7484933 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaactcaatttc 7485005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 21504009 - 21504084
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaat 80  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||| |||||| ||||||||||| || ||||||||    
T  21504009 ttattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaatgaatttgcaaat 21504084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 21300165 - 21300093
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||  | ||||||||||||||||| ||||||    
T  21300165 aaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaacatgctaaacttaatttc 21300093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 36508925 - 36508845
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    ||||||||||||||||||| |||||  ||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  36508925 ttattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaa 36508845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 19921573 - 19921641
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||| |||||| |||||||||||||||||| ||| || || || |||||||||| |||||||||||||    
T  19921573 aattataacttcaaaacctaattcccaaatttccataattacaacctacaacatgttaaactcaatttc 19921641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 21405750 - 21405678
Alignment:
Q  193 aaccaattacaacttctaaacctaatt-cccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| || | ||||| || |||| |||||||    
T  21405750 aaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattt 21405678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 21618047 - 21617979
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| |||||||||| |||||||| |||||||||||||||| || ||||||| || |||| |||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaacttgttaaattcaattt 21617979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 265908 - 265973
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| |||||||||||| |||||||||||| |||| |||||||||    
T  265908 ttattctacagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 265973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 17011598 - 17011663
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  17011598 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 17011663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 29448710 - 29448775
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| |||||||||||||||| |||||||| |||| |||||||||    
T  29448710 ttattctacagcctgaacttcaattcttatgttaattcattggtttacctactcttt-aacaatcaa 29448775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 31252011 - 31251968
Alignment:
Q  194 accaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||||| |||||||||||||||||| |||||||| |||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaacta 31251968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 20566508 - 20566549
Alignment:
Q  224 aattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||| ||||| || ||||||||||||||||||||||||    
T  20566508 aattcccataactacaacctacaacatgctaaactcaatttc 20566549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44822316 - 44822230
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44822316 attgttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 44822230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 44822183 - 44822098
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  44822183 attaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaatttccagaacta 44822098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 7052083 - 7051991
Alignment:
Q  153 ttaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctac 245  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  7052083 ttaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaatttctaaacctaattcccaaatttctaaaactaaaatctac 7051991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 24723513 - 24723420
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctac 245  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||| |||||||    
T  24723513 attaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctac 24723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21188215 - 21188142
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  21188215 ttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaacaatcaaattgcaa 21188142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 19676642 - 19676714
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||||||||||| || ||||| || ||||||||||||||||||||||||    
T  19676642 aaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttc 19676714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 21046170 - 21046098
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  21046170 aaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 21046098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 42912980 - 42913052
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||    
T  42912980 aaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaacatgctaaactcaatttc 42913052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 7320730 - 7320644
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||| ||||||  ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| || |||| |||||||    
T  7320730 ttctactattaaatcaaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaacctgttaaattcaattt 7320644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 22350543 - 22350621
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||||||||||  ||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  22350543 tctacaacctgaacatcaatttttatattaattcattgaattacctacaccttcaacaatcaaattgcaattcaaaacc 22350621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 16058434 - 16058363
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  16058434 aaccaattacaacttc-aaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttc 16058363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 20633755 - 20633680
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattccc---aaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||   | ||||| || ||||||||||||||||||||||||    
T  20633755 aaccaattacaacttcaaaacctaattcccaaattcccataataactataacctacaacatgctaaactcaatttc 20633680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 51324420 - 51324479
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  51324420 ttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaacta 51324479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 20708243 - 20708160
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  |||||| |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  20708243 gttactctacaacctaaacatcaactttcacattaatttattggattacttacactttcaagaatcaaattgcaattcaaaacc 20708160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 22350647 - 22350718
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| || |||||||||| ||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  22350647 aaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattt 22350718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 46197927 - 46197862
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  46197927 ttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaa 46197862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 7702983 - 7703052
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    |||||||||||||||||||||||||   |   | || |||||||||||||||||||||||||||||||||    
T  7702983 ttattctacaacctaaacatcaattttcacaatgatccattggattacctacactttcaacaatcaaatt 7703052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 7052195 - 7052115
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    ||||| |||||||| |||| |||||  ||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  7052195 ttattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaa 7052115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 13302847 - 13302903
Alignment:
Q  208 ctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  13302847 ctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattt 13302903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 22823394 - 22823311
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  ||||||||| | ||||| ||||||||||| ||||||||||||| ||||||||    
T  22823394 gttactctacaacctaaacatcaactttcacattaattcatcgaattacttacactttcaagaatcaaattgcaattcaaaacc 22823311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 39061188 - 39061271
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  ||||||||| ||||||| ||||||||||| ||||||||| ||| ||||||||    
T  39061188 gttactctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattacaattcaaaacc 39061271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 29763814 - 29763749
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  29763814 ttattctacagtctaaacttcaattcttatgttaattcattgtattacctactcttt-aacaatcaa 29763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 50001346 - 50001411
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  50001346 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 50001411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 8276111 - 8276079
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  8276111 aaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 38056794 - 38056762
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  38056794 aaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 24723642 - 24723560
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| |||| |||||  ||  |||||||||   ||||| ||| ||||||||||||||||||||| | ||||||    
T  24723642 ttattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaatcaaattgcaattaaaaacc 24723560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 4595967 - 4595935
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||| ||||||||||||    
T  4595967 aaccaattacaacttctaaatctaattcccaaa 4595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 34392666 - 34392702
Alignment:
Q  35 gttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  34392666 gttaattcaatggattacctactctttcaacaatcaa 34392702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 14274093 - 14274175
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14274093 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 14274175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 14274222 - 14274304
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaa 234  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||    
T  14274222 attaacaccttaattccaacaatcaattctacaattaaaacaacaaattacaacttctaaacctaattcccaattttccaaaa 14274304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42566018 - 42565945
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  42566018 attgttattctacaacctgaacatcaatttctatgttaattcattggattacgtacactttcaacaatcaaatt 42565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 47974982 - 47974897
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||| |||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  47974982 attagcatcttaatttcaacaatcaactctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaacta 47974897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 708591 - 708523
Alignment:
Q  153 ttaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcc 221  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  708591 ttaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcc 708523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 12465381 - 12465309
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  12465381 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 12465309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 13147593 - 13147521
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  13147593 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 13147521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 12127284 - 12127212
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||    
T  12127284 aaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaacatgttaaactcaatttc 12127212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 20214078 - 20214150
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  20214078 aaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 20214150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 20620217 - 20620289
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  20620217 aaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttc 20620289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33060305 - 33060388
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaa 84  Q
    ||||||||||||| |||| ||||||||||  ||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  33060305 attgttattctacgacctgaacatcaatttttatattaattctttggattgcctacactttcaacaatcaaattgcaattcaaa 33060388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 15095773 - 15095687
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  15095773 ttctactattaaatcaactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattt 15095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 15140129 - 15140215
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  15140129 ttctactattaaatcaaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattt 15140215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 8851280 - 8851208
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||| |||||||| || ||||| || ||||||||||||||||||||||||    
T  8851280 aaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaacatgctaaactcaatttc 8851208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 11067399 - 11067471
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||| || || |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  11067399 aaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 11067471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 12323051 - 12322979
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||| ||||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  12323051 aaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttc 12322979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 12372205 - 12372277
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| || || |||||||||||||||||||||    
T  12372205 aaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaacatgctaaactcaatttc 12372277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 14180519 - 14180447
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || |||||| |||||||||||||||||    
T  14180519 aaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaatatgctaaactcaatttc 14180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 32433710 - 32433638
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||||||||||||||    
T  32433710 aaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaacatgctaaactcaatttc 32433638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 8135358 - 8135286
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| || ||||||| || |||| ||||||||    
T  8135358 aaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaatttc 8135286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 10277258 - 10277330
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||||||| ||||||    
T  10277258 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttc 10277330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 13132442 - 13132370
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  | ||||||| || |||| ||||||||    
T  13132442 aaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaacttgttaaattcaatttc 13132370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 15623942 - 15624022
Alignment:
Q  185 attaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |  |||| ||||||||    
T  15623942 attaaactaaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaacctattaaattcaatttc 15624022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 46386209 - 46386137
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| || |||||||||  |||||||||||||    
T  46386209 aaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatattaaactcaatttc 46386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 21661124 - 21661207
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  21661124 gttactctacaacctaaacatcaactttcacattaattcattggattacttacactttcaagaatcaaattgcaattcaaaacc 21661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 12557853 - 12557923
Alignment:
Q  194 accaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| || ||||||| || |||| |||||||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaacctgttaaattcaattt 12557923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 47975073 - 47974991
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| |||| |||||  ||  ||||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  47975073 ttattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaatcaaattgcaattcaaaacc 47974991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 12754847 - 12754767
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    |||||||||||||| |||| |||||  ||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  12754847 ttattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaa 12754767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 48807447 - 48807392
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    |||||||||||||||||  ||| |||||||||||||||||||||| ||||||||||    
T  48807447 aaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaac 48807392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 13698760 - 13698702
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatg 251  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| || ||| ||||||    
T  13698760 aaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacatg 13698702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 32160382 - 32160317
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  32160382 ttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaa 32160317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 33002078 - 33002132
Alignment:
Q  179 tctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaa 233  Q
    ||||| |||| || ||||||||||||||||||| |||||||||||||||||||||    
T  33002078 tctactattacaacaaccaattacaacttctaaccctaattcccaaattcccaaa 33002132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 16999364 - 16999437
Alignment:
Q  193 aaccaattacaacttctaaacctaattccc-aaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||| ||||||||||| ||||||||||||| ||||||||| ||||| ||  || ||||||||||||||||||||    
T  16999364 aaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataacatgctaaactcaatttc 16999437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 37539352 - 37539388
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattg 75  Q
    |||||||||||||||||||||||||||||||||||||    
T  37539352 attcattggattacctacactttcaacaatcaaattg 37539388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 41284963 - 41285006
Alignment:
Q  194 accaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaacta 41285006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 14219008 - 14218946
Alignment:
Q  202 caacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||||||| |||||| |||||||| || ||||||| || |||| |||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaacttgttaaattcaattt 14218946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 16550184 - 16550119
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  16550184 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 16550119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16615478 - 16615543
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  16615478 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 16615543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 35771554 - 35771508
Alignment:
Q  202 caacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaac 35771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 11054643 - 11054715
Alignment:
Q  193 aaccaattacaacttctaaacctaatt-cccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||| || || ||||||| || |||| |||||||    
T  11054643 aaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaacctgttaaattcaattt 11054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 19195096 - 19195144
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| ||||||||||| |||||||||| || ||||||||    
T  19195096 attcattggattacatacactttcaaaaatcaaattgaaattcaaaacc 19195144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 20586283 - 20586355
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||| ||||||| || |||| || || |||||||| ||||| || |||||||||| |||||||||||||    
T  20586283 aaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaacatggtaaactcaatttc 20586355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 24270068 - 24269996
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||| ||||| ||||||||||||||| ||| ||||   | || | ||||||||||||||||||||||    
T  24270068 aaccaattacgacttcaaaacctaattcccaacttcacaaattcacaaacaacaacatgctaaactcaatttc 24269996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 4071759 - 4071805
Alignment:
Q  202 caacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||||||||||||||||| ||||| |||||||||| || |||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaac 4071805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 13315263 - 13315197
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||| |||| |||||  |   |||||||||||| |||||||| ||||||||||||||    
T  13315263 ttattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaacaatcaa 13315197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 708703 - 708630
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    ||||||||||||||||||| |||||  ||  ||||| |||   ||| ||||| |||||||||||||||||||||    
T  708703 ttattctacaacctaaacaccaattattaccttaatccatcatattgcctactctttcaacaatcaaattgcaa 708630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 17070425 - 17070384
Alignment:
Q  179 tctacaattaaaataaccaattacaacttctaaacctaattc 220  Q
    |||||| |||||  ||||||||||||||||||||||||||||    
T  17070425 tctacacttaaatcaaccaattacaacttctaaacctaattc 17070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 19486084 - 19486039
Alignment:
Q  193 aaccaattacaacttctaaacctaatt-cccaaattcccaaaacta 237  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  19486084 aaccaattacaacctctaaccctaatttcccaaattcccaaaacta 19486039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 25943049 - 25943121
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||| ||||| |||||||||| |||||||| ||||   | || | ||||||||||||| ||||||||    
T  25943049 aaccaattacgacttcaaaacctaatttccaaattcacaaattcacaaacaacaacatgctaaattcaatttc 25943121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24884227 - 24884313
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24884227 attgttattctataacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 24884313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22501726 - 22501812
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22501726 attgttattccacaacttgaacatcaattcatatgttaattcattggattacctacactttcaacaaacaaattgcaattcaaaacc 22501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22509660 - 22509746
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22509660 attgttattccacaacttgaacatcaattcatatgttaattcattggattacctacactttcaacaaacaaattgcaattcaaaacc 22509746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 357771 - 357856
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  357771 attaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaatttcaaaaacta 357856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 1383705 - 1383620
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  1383705 attaacatcttaatttctacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaatttccaaaacta 1383620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45535792 - 45535869
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  45535792 attgttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaacaatcaaattgcaa 45535869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19647100 - 19647177
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  19647100 attgttattctacaacctgaacatcaattcttatgttaattcattggattacctacattttcaacaatcaatttgcaa 19647177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 24884360 - 24884435
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaatt 227  Q
    ||||| ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24884360 attaatatcttaattccaacaatcaattctacaattaagacaaccaattacaacttctaaacctaattcccaaatt 24884435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 5031250 - 5031178
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  5031250 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 5031178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 9975860 - 9975932
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  9975860 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 9975932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 17307417 - 17307489
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  17307417 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 17307489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 22251569 - 22251497
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  22251569 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 22251497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 18388415 - 18388337
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18388415 tctacaacctgaacatcaatttttatattaattcattggattacctacaccttcaacaatcaaattgcaattcaaaacc 18388337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 22501860 - 22501964
Alignment:
Q  153 ttaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaa-ttcccaaattcccaaaactaaaatctacaacatg 251  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| ||||| |||||||||||  ||||||| || | ||||||||    
T  22501860 ttaacatcttaattccaacaatcaattttacaattaaaacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatg 22501959  T
Q  252 ctaaa 256  Q
     ||||    
T  22501960 ttaaa 22501964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 22509794 - 22509898
Alignment:
Q  153 ttaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaa-ttcccaaattcccaaaactaaaatctacaacatg 251  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| ||||| |||||||||||  ||||||| || | ||||||||    
T  22509794 ttaacatcttaattccaacaatcaattttacaattaaaacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatg 22509893  T
Q  252 ctaaa 256  Q
     ||||    
T  22509894 ttaaa 22509898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 24516117 - 24516189
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || |||||||||| |||||||||||||    
T  24516117 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttc 24516189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 27484598 - 27484526
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  27484598 aaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 27484526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 40912251 - 40912323
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  40912251 aaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 40912323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45535662 - 45535726
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaac 65  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  45535662 attgttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaac 45535726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 25142134 - 25142205
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  25142134 aaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattt 25142205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45528407 - 45528484
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||| ||||| ||||||||||   ||||||||||||| |||||| |||||||||||||||||||||||||    
T  45528407 attgttattctataacctgaacatcaattttaatgttaattcatttgattacatacactttcaacaatcaaattgcaa 45528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 19201321 - 19201249
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||| | ||||| || |||||||||| |||||||||||||    
T  19201321 aaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaacatgataaactcaatttc 19201249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 24436583 - 24436651
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| |||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||    
T  24436583 aattacaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttc 24436651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 24780961 - 24780889
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||  ||||||||||||||||||    
T  24780961 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacttcatgctaaactcaatttc 24780889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 1383834 - 1383752
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| || | |||||  || |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  1383834 ttattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaatcaaattgcaattcaaaacc 1383752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 12626614 - 12626548
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||| ||||||||||| | ||||||||||| ||||||||||| ||||||||||||||    
T  12626614 ttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaatcaa 12626548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 36841195 - 36841267
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||| | ||||||||| ||||| || |||||||||| |||||||||||||    
T  36841195 aaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaacatgttaaactcaatttc 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20006158 - 20006073
Alignment:
Q  1 attgttattctacaacctaaacatcaattcat--atgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaa 84  Q
    |||||||||||||||| | ||||||| ||  |  || |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  20006158 attgttattctacaacatgaacatcattttttttatattaattcattcgattacctacactttcaacaatcaaattgcaattcaaa 20006073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 37270630 - 37270702
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||| ||||||||||| |||| |||||| ||||||| || ||||| || ||||||||||||||||||||||||    
T  37270630 aacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaacatgctaaactcaatttc 37270702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 3539767 - 3539822
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| || |||||||    
T  3539767 aaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaac 3539822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 2523871 - 2523797
Alignment:
Q  190 aataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||| ||  |||||||||| ||||||||||| || || || |||||||||| ||||||||||||    
T  2523871 aataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaacatgttaaactcaattt 2523797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 44072473 - 44072559
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||| |||||| |||||||   ||||||||||  |||||| ||||||||||||||||| || ||||||| ||||||| |||||||    
T  44072473 ttctactattaaattaaccaaaatcaacttctaacgctaatttccaaattcccaaaactacaacctacaacttgctaaattcaattt 44072559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 19358821 - 19358893
Alignment:
Q  193 aaccaattacaacttctaaacctaa-ttcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| || | ||||| || |||| |||||||    
T  19358821 aaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacttgttaaattcaattt 19358893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 27852605 - 27852669
Alignment:
Q  200 tacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||| |||||||||||||||||||||| | || ||||||| || |||| |||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaacttgttaaattcaattt 27852669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 25584486 - 25584403
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  ||||||||| ||||||| ||||||||||| |||||||||| || ||||||||    
T  25584486 gttactctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattgtaattcaaaacc 25584403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 28652733 - 28652664
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    ||||||||| |||| ||||||||||  ||  ||||||||||||||||||||| |||| |||||| |||||    
T  28652733 ttattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaatt 28652664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 28345184 - 28345136
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||||||||| || |||||||||| || ||||||||    
T  28345184 attcattggattacctacacttttaaaaatcaaattgaaattcaaaacc 28345136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 18388311 - 18388256
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||| || |||||||||| | ||||||||||||||||||||||| || |||||||    
T  18388311 aaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaac 18388256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 18390326 - 18390291
Alignment:
Q  202 caacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||||||| |||||||||||||||||||||||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaacta 18390291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 22259974 - 22260040
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||| ||||||||||||||| || |||||| || ||||||| || |||| |||||||    
T  22259974 aattacaacttctaagcctaattcccaaatt-cctaaactacaacctacaacctgttaaattcaattt 22260040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 18358149 - 18358084
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||| ||| |||| |||||||||    
T  18358149 ttattctacagcctgaacttcaattcttatgttaattcattgaattacatactcttt-aacaatcaa 18358084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 21081151 - 21081086
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  21081151 ttattctacagcctgaacttcaattcttatgttaattcattgttttacctactcttt-aacaatcaa 21081086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 21915494 - 21915544
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattaccta 55  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||    
T  21915494 ttattctacagcctgaacttcaattcttatgttaattcattgaattaccta 21915544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 25184059 - 25184124
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||||  || ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  25184059 ttattctacagtctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 25184124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 39683153 - 39683214
Alignment:
Q  204 acttctaaacctaattcccaaattc-ccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||| ||| |||||||||||||||| | |||||||||| |||||||||| |||| |||||||    
T  39683153 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattt 39683214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 16494 - 16598
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatg 251  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||    
T  16494 attaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacatg 16593  T
Q  252 ctaaa 256  Q
     ||||    
T  16594 ttaaa 16598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6980 - 6896
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  6980 attgttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaaattgcaattcaaaa 6896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 6847 - 6762
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  6847 attaacatcttaatttcaaaaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcctaaatttccaaaacta 6762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 106212 - 106128
Alignment:
Q  153 ttaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  106212 ttaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacgtctaaacctaattcccaaatttccaaaacta 106128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 18585545 - 18585629
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  18585545 attgttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaaattgcaattcaaaa 18585629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 7827903 - 7827975
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  7827903 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 7827975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 23150408 - 23150336
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  23150408 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 23150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 18585715 - 18585780
Alignment:
Q  172 aatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  18585715 aatcaattctacaattaaaacaaccaattacaacttctaaacctaattcctaaatttccaaaacta 18585780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18982278 - 18982355
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||| |||||| |||  ||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  18982278 attgttattctacaacctgaacatcgatttttatattagttcattggattacctacgctttcaacaatcaaattgcaa 18982355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 15890833 - 15890761
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||||||||||  |||||||| || |||||||||| |||||||||||||    
T  15890833 aaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaacatgttaaactcaatttc 15890761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 19655348 - 19655280
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| |||||||||||||||||||||| ||||| || |||||||||| |||||||||||||    
T  19655348 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttc 19655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 27330102 - 27330030
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||| || |||||||||| |||||||||||||    
T  27330102 aaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatttc 27330030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 27390842 - 27390770
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||| || |||||||||| |||||||||||||    
T  27390842 aaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatttc 27390770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 18459174 - 18459245
Alignment:
Q  3 tgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    |||||||||||||||| |||| || ||  ||||||||||||||||||| |||||||||||||||||||||||    
T  18459174 tgttattctacaacctgaacaacagtttttatgttaattcattggatttcctacactttcaacaatcaaatt 18459245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 18703503 - 18703571
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| ||| |||||||||||||||||| ||||| || ||||||||| ||||||||||||||    
T  18703503 aattacaacttcaaaatctaattcccaaattcccataactacaacctacaacattctaaactcaatttc 18703571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 18709438 - 18709506
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| ||| |||||||||||||||||| ||||| || ||||||||| ||||||||||||||    
T  18709438 aattacaacttcaaaatctaattcccaaattcccataactacaacctacaacattctaaactcaatttc 18709506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 3007057 - 3006974
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  3007057 gttactctacaacctaaacatcaactttcacattaattcattggattacttacactttcaagaatcaaattgcaattcaaaacc 3006974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 27125594 - 27125527
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||| |||||||| ||||||||||||| ||||| || |||||||||||||| ||||||||    
T  27125594 aattacaacttcaaaacctaagtcccaaattcccataactacaacctacaacatgctaatctcaattt 27125527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 28948490 - 28948539
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaatt 227  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  28948490 ttctactattaaaacaaccaattacaacttctaaacctaattcccaaatt 28948539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 18928614 - 18928682
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||||||||||| ||||||||||||||||  || ||||||| || |||| |||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattt 18928682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 19401028 - 19401096
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||| |||||||||||| |||||||||||||||| || ||||||| || |||| |||||||    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattt 19401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 35057448 - 35057496
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  35057448 attcattggattacctacactttcaacaatcaaattgaaattcaaaacc 35057496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 13285656 - 13285699
Alignment:
Q  43 attggattacctacactttcaacaatcaaattgcaaatcaaaac 86  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  13285656 attggattacctacactttcaacaatcaaattgaaattcaaaac 13285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 24267801 - 24267852
Alignment:
Q  214 ctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacatgctaaactcaatttc 24267852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 24506282 - 24506228
Alignment:
Q  20 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    ||||||||||  |||  |||||||||||||||||||||||||||||||| |||||    
T  24506282 aacatcaatttttatactaattcattggattacctacactttcaacaattaaatt 24506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 29045134 - 29045200
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||| ||||||||||  ||  ||| ||||| ||||||||||| ||||||||||||||    
T  29045134 ttattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaatcaa 29045200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 23501606 - 23501643
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaa 234  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  23501606 aattacaacttctaaacctaattcccaaatttccaaaa 23501643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 31166088 - 31166164
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaat 80  Q
    |||| ||||||||||||||||||| |   |  ||||||||||||||||  |||||||| || |||||||||||||||    
T  31166088 gttactctacaacctaaacatcaactttcacattaattcattggattagttacactttaaagaatcaaattgcaaat 31166164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 15891751 - 15891686
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||| |||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  15891751 ttattttacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 15891686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 15900836 - 15900771
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||| |||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  15900836 ttattttacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 15900771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 26923770 - 26923709
Alignment:
Q  204 acttctaaacctaattcccaaattc-ccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||| ||| |||||||||||||||| | |||||||||| |||||||||| |||| |||||||    
T  26923770 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattt 26923709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20517242 - 20517156
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||| |||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20517242 attgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 20517156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22344989 - 22345075
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||| |||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22344989 attgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 22345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22356649 - 22356735
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||| |||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22356649 attgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaatcaaattgcaattcaaaacc 22356735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20879339 - 20879416
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  20879339 attgttattctacaacctgaacatcaattcttatgttaattcattggattacctacacttttaacaatcaatttgcaa 20879416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 5082333 - 5082261
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  5082333 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 5082261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 5761469 - 5761537
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  5761469 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 5761537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 6573177 - 6573105
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  6573177 aaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaacatgctaaactcaatttc 6573105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 19140696 - 19140768
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||    
T  19140696 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacttgctaaactcaatttc 19140768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 20083759 - 20083687
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||||||||||| || ||||| || ||||||||||||||||||||||||    
T  20083759 aaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttc 20083687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 42265734 - 42265656
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  42265734 tctacaacctgaacatcaatttttatattaattcattggattacatacaccttcaacaatcaaattgcaattcaaaacc 42265656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 42818028 - 42817956
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||| |||||| ||||||||||| ||||| || ||||||||||||||||||||||||    
T  42818028 aaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaacatgctaaactcaatttc 42817956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 6101874 - 6101802
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||| |||||| |||||| ||||||||||||||| ||||| || |||||||||||||||| |||||||    
T  6101874 aaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaacatgctaaacacaatttc 6101802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21676777 - 21676713
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaac 65  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||| ||||||||    
T  21676777 attgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaac 21676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 22318049 - 22317961
Alignment:
Q  176 aattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||||| |||||| || ||| ||| || |||| |||||||    
T  22318049 aattctactattaaaccaaccaattacaacttctaaacctaaatcccaaattcccgaaactacaacctagaacctgttaaattcaattt 22317961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 37292636 - 37292708
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||||||| ||||||    
T  37292636 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttc 37292708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 22483650 - 22483713
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaat 68  Q
    |||||||||||||| ||||||||||| |||||||||||||  |||||||||| |||||||||||    
T  22483650 ttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaat 22483713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 6202707 - 6202779
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||| ||| ||||||||    
T  6202707 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgcaaaattcaatttc 6202779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 31722615 - 31722560
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| || |||||||    
T  31722615 aaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctacaac 31722560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 42265630 - 42265559
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| || |||||||||| ||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  42265630 aaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattt 42265559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 25657696 - 25657631
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||||||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  25657696 ttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 25657631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 39936127 - 39936056
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatct---acaacatgctaaactcaatttc 265  Q
    |||||||||||| ||||||||||| |||||||||| ||||| || ||   ||||||||||||||||||||||    
T  39936127 aattacaacttcaaaacctaattcgcaaattcccataactacaacctacaacaacatgctaaactcaatttc 39936056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 20178644 - 20178581
Alignment:
Q  199 ttacaacttctaaacctaattcccaaattcccaaaactaaaatctacaaca-tgctaaactcaa 261  Q
    |||||||||| ||||||||||||||||||| || ||||| || |||||||| ||||||||||||    
T  20178644 ttacaacttcaaaacctaattcccaaattctcataactacaacctacaacattgctaaactcaa 20178581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 22532268 - 22532209
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||| ||||||| || |||||||||||| |||||||||||||||| || |||||||||    
T  22532268 ttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaacta 22532209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 22536953 - 22536894
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    |||||| ||||||| || |||||||||||| |||||||||||||||| || |||||||||    
T  22536953 ttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaacta 22536894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 36305743 - 36305794
Alignment:
Q  36 ttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||    
T  36305743 ttaattcatcggattacttacactttcaagaatcaaattgcaattcaaaacc 36305794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 39694394 - 39694343
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  39694394 aattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaac 39694343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 45469341 - 45469286
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||||||||||||||||||| |||||||||||||  |||||||| || |||||||    
T  45469341 aaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaac 45469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16198706 - 16198771
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  16198706 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 16198771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 23478952 - 23479016
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatca 70  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| ||||||||    
T  23478952 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatca 23479016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 3273820 - 3273892
Alignment:
Q  193 aaccaattacaacttctaaacctaatt-cccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||| || | ||||| || |||| |||||||    
T  3273820 aaccaatcacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattt 3273892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 20022154 - 20022122
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  20022154 aaccaattacaacttctaaacctaattcccaaa 20022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 22708476 - 22708425
Alignment:
Q  36 ttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||| | ||||||    
T  22708476 ttaattcattgtattacttacactttcaagaatcaaattgcaatttaaaacc 22708425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 19880693 - 19880758
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||  ||||||||| |||| |||||||||    
T  19880693 ttattctacagcctgaacttcaattcttatgttaattcatttaattacctactcttt-aacaatcaa 19880758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 22610448 - 22610382
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||||| || ||| ||| | | || ||||||||| |||||||||||| ||||||||||||||    
T  22610448 ttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaa 22610382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 26454576 - 26454641
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| | ||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  26454576 ttattctacagcctgaactttaattcttatgttaattcattgaattacctactcttt-aacaatcaa 26454641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 21678995 - 21678947
Alignment:
Q  36 ttaattcattggattacctacactttcaacaatcaaattgcaaatcaaa 84  Q
    ||||||||||| ||||||||| |||||||| ||| |||||||| |||||    
T  21678995 ttaattcattgaattacctactctttcaaccatccaattgcaattcaaa 21678947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 127 - 204
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcc 229  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  127 attaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatttccaatttcc 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 21501 - 21586
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  21501 attaacatcttaatttaaacaatcaattctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaacta 21586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 29694 - 29622
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || |||| |||||||||||||||||||    
T  29694 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacatgctaaactcaatttc 29622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 21410 - 21492
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| |||| |||||  ||  |||||||||  |||||||||| ||||||||||| ||||||||| ||||||||    
T  21410 ttattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaatgaaattgcaattcaaaacc 21492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16973 - 17052
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaat 80  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  16973 attgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaat 17052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26504 - 26583
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaat 80  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  26504 attgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaat 26583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48631198 - 48631268
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  48631198 attgttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaatcaa 48631268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3160812 - 3160735
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  3160812 attgttattctacaacctaaacatcaatttttatattaattcattgaattacctactctttcaacaatcaaattgcaa 3160735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 17044897 - 17044969
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  17044897 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 17044969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 40807927 - 40807999
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  40807927 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 40807999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 49900661 - 49900733
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  49900661 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 49900733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 50348147 - 50348076
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  50348147 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt 50348076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 40812767 - 40812836
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  40812767 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 40812836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 10563639 - 10563711
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  10563639 aaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaacatgctaaactcaatttc 10563711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 22306704 - 22306632
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  22306704 aaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacatgctaaactcaatttc 22306632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 41172492 - 41172420
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||    
T  41172492 aaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacatgctaaactcaatttc 41172420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 9511052 - 9510985
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctac 245  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9511052 ttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctac 9510985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 9519027 - 9518960
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctac 245  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9519027 ttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctac 9518960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13522534 - 13522449
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| ||| || ||||||||    
T  13522534 attgttattctacaacctgaacatcaattcttatgttaattcattggattacctactcttt-aacgatcaatttgaaattcaaaacc 13522449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 11259365 - 11259434
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||| ||||||||    
T  11259365 caattacaacttcaaaacctaattcccaaattctcataactacaatctacaacatgctaaattcaatttc 11259434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 17518994 - 17518922
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||| ||||| ||||||||    
T  17518994 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacattctaaagtcaatttc 17518922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 17533856 - 17533784
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||| ||||| ||||||||    
T  17533856 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacattctaaagtcaatttc 17533784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 35064658 - 35064590
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttc 35064590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 44274349 - 44274421
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  44274349 aaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaacatgctaaactcaatttc 44274421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 12155210 - 12155143
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||||||||| ||||||||||   ||||||||||||||| |||||||||||||||||||||||    
T  12155210 gttattctacaacctcaacatcaattttcatgttaattcattgggttacctacactttcaacaatcaa 12155143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 45803519 - 45803453
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  45803519 ttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaacaatcaa 45803453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 35354536 - 35354605
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||||| |||||||||| ||||||||||| ||||| || | ||||||||||||||||||||||    
T  35354536 caattacaacttcaaaacctaatttccaaattcccataactacaaccaacaacatgctaaactcaatttc 35354605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 17047057 - 17047129
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| ||||||||||||||  | ||||| || ||||||||||||||||||||||||    
T  17047057 aaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaacatgctaaactcaatttc 17047129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 33565012 - 33565088
Alignment:
Q  188 aaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||  || ||||||| || |||| |||||||    
T  33565012 aaaatcaccaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattt 33565088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 49968993 - 49968909
Alignment:
Q  180 ctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||| ||||||  ||||||||||||||| |||||||||||||||||||| |||||||| || ||||||| || |||| |||||||    
T  49968993 ctactattaaatcaaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattt 49968909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 11563655 - 11563710
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  11563655 aaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaac 11563710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12151133 - 12151054
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaat 80  Q
    |||||||||||| ||| ||| ||||||||   ||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  12151133 attgttattctaaaacataagcatcaattttcatgttaattcattgggttacctacactttcaacaatcaatttgaaaat 12151054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 42324093 - 42324022
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||  ||| |||||||    
T  42324093 aaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacatgtcaaattcaattt 42324022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6805109 - 6805027
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| |||| |||||  ||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||||    
T  6805109 ttattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaacc 6805027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 19568328 - 19568274
Alignment:
Q  194 accaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  19568328 accaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaac 19568274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 14508777 - 14508850
Alignment:
Q  193 aaccaattacaacttctaaa-cctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||| ||||||||| ||||||||| ||||| || |||||||||||||| |||||||||    
T  14508777 aaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacatgctaacctcaatttc 14508850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 10311458 - 10311530
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||| ||| ||||||||    
T  10311458 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgcaaaattcaatttc 10311530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 17539037 - 17539109
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||| || |||||||||| |||| ||||||||    
T  17539037 aaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaacatgataaaatcaatttc 17539109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 17694001 - 17694069
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||| ||| ||||||| |||||| ||| ||||| || |||||||||||||||||||||||    
T  17694001 caattacaacttcaaaatctaattcacaaatttccataactacaacctacaacatgctaaactcaattt 17694069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 35961055 - 35960979
Alignment:
Q  188 aaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||  || ||||||| || |||| |||||||    
T  35961055 aaaatcaccaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaacttgttaaattcaattt 35960979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 15931624 - 15931556
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| |||||||||||| |||||| || ||||| || ||| |||||||||||||| |||||    
T  15931624 aattacaacttcgaaacctaattccaaaattctcataactacaacctaaaacatgctaaactctatttc 15931556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 37038979 - 37039043
Alignment:
Q  193 aaccaattacaacttctaaacctaatt-cccaaattcccaaaactaaaatctacaacatgctaaa 256  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||| || |||||||||| ||||    
T  37038979 aaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacatgttaaa 37039043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 6003085 - 6003136
Alignment:
Q  36 ttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||| ||||||||||| |||||||||| || ||||||||    
T  6003085 ttaattcattggattacttacactttcaagaatcaaattgtaattcaaaacc 6003136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 13185834 - 13185880
Alignment:
Q  202 caacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaac 13185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16979782 - 16979847
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  16979782 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 16979847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 22146879 - 22146834
Alignment:
Q  193 aaccaattacaacttctaaacctaa-ttcccaaattcccaaaacta 237  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  22146879 aaccaattacaacttctaaccctaatttcccaaattcccaaaacta 22146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 24177921 - 24177869
Alignment:
Q  35 gttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||| ||| || ||||| ||||||||||||||||||||| ||||||||    
T  24177921 gttaattcaatggtttgcctactctttcaacaatcaaattgcaattcaaaacc 24177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 45530724 - 45530652
Alignment:
Q  193 aaccaattacaacttctaaacctaa-ttcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||| || | ||||| || |||| |||||||    
T  45530724 aaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaacctgttaaattcaattt 45530652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 22652643 - 22652708
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| |||||||||||| | |||||||||| |||| |||||||||    
T  22652643 ttattctacagcctgaacttcaattcttatgttaattcactagattacctactcttt-aacaatcaa 22652708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 37641615 - 37641570
Alignment:
Q  193 aaccaattacaacttctaaacctaatt-cccaaattcccaaaacta 237  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  37641615 aaccaattacaacctctaaccctaatttcccaaattcccaaaacta 37641570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 14641666 - 14641638
Alignment:
Q  197 aattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||    
T  14641666 aattacaacttctaaacctaattcccaaa 14641638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 59841 - 59764
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||  ||||||||||||||||||||    
T  59841 attgttattctacaacctaaacatcaatttttatattaattcattggattacctactatttcaacaatcaaattgcaa 59764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14477498 - 14477571
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  14477498 attgttattctacaatctgaacatcaatttctatgttaattcattggattacctacactttcaacaatcaaatt 14477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 16998456 - 16998528
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  16998456 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 16998528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 25091584 - 25091656
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  25091584 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 25091656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 53630595 - 53630523
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  53630595 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 53630523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 10356556 - 10356485
Alignment:
Q  194 accaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  10356556 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 10356485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 14549650 - 14549735
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaacta 237  Q
    ||||||||| ||| |  ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||||    
T  14549650 attaacatcctaattttaacaatcaattctacaattaaaacacctaattacaacttctaaacctaattcccaaatttccaaaacta 14549735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 11425874 - 11425946
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  11425874 aaccaattacaatttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 11425946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18462889 - 18462963
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattg 75  Q
    |||||| |||||||| || ||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  18462889 attgttgttctacaatctgaacatcaattttcatgttaattcattggattacctacactttcaacaatcaaattg 18462963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13164999 - 13165072
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    ||||||||||||||||||  |||||||||   |||||||||||||||||| |||||||||||||||||||||||    
T  13164999 attgttattctacaacctggacatcaattttcatgttaattcattggatttcctacactttcaacaatcaaatt 13165072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 42875731 - 42875800
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||    
T  42875731 caattacaacttcaaaacctatttcccaaattcccataactacaacctacaacatgctaaactcaatttc 42875800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 15115153 - 15115225
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  15115153 aaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaacatgctaaactcaatttc 15115225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 37019601 - 37019673
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| || |||||||||| |||||||||||||    
T  37019601 aaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgttaaactcaatttc 37019673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 6633658 - 6633586
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||||||| ||||||    
T  6633658 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttc 6633586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 9924079 - 9924155
Alignment:
Q  188 aaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||  || ||||||| || |||| |||||||    
T  9924079 aaaatcaccaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattt 9924155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 19610255 - 19610327
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||||||| || |||| |||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  19610255 aaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaacatgctaaactcaatttc 19610327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 46001652 - 46001580
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||||||| ||||||    
T  46001652 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttc 46001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 11478772 - 11478704
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||| |||||||||||||| ||||||||||||||||  |||||||||| || |||| |||||||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaacttgttaaattcaattt 11478704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 10694427 - 10694362
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  10694427 ttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaa 10694362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 14353977 - 14353899
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||||| |   |  ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||    
T  14353977 tctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattgcaattcaaaacc 14353899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 14549520 - 14549600
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    |||||||||||||| |||| |||||  ||  |||||||||  |||||| ||| ||||||||||||||||||||| ||||||    
T  14549520 ttattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaatcaaattgcaattcaaaa 14549600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 19434841 - 19434761
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    |||||||||||||| |||| |||||  |   |||||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  19434841 ttattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaa 19434761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 9870567 - 9870508
Alignment:
Q  193 aaccaattacaacttctaaacctaa-ttcccaaattcccaaaactaaaatctacaacatg 251  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||    
T  9870567 aaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacatcatg 9870508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 9638940 - 9638972
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  9638940 aaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 45314315 - 45314240
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaa 84  Q
    ||||||||||||||||||| |   |  ||||||||| | ||||| ||||||||||| ||||||||||||| |||||    
T  45314315 tctacaacctaaacatcaactttcacattaattcatcgaattacttacactttcaagaatcaaattgcaattcaaa 45314240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 9622357 - 9622423
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||||||| || ||| ||| | | || ||||||||| |||||||||||| ||||||||||||||    
T  9622357 ttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaa 9622423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16296741 - 16296807
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||| ||||||| |||| |||||  ||  ||||||||| ||||||||||| ||||||||||||||    
T  16296741 ttattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaa 16296807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 589 - 517
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  589 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 13513 - 13441
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13513 aaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaacatgctaaactcaatttc 13441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38628 - 38554
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattg 75  Q
    |||||||||| ||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  38628 attgttattccacaacctgaacatcaattttcatgttaattcattggattacctacactttcaacaatcaaattg 38554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28584 - 28653
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    |||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  28584 ttattctacaacctgaacatcaatttttatgttaattcattagattacctacactttcaacaatcaaatt 28653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19046 - 18969
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||||||||||||| |||||| |||  ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  19046 attgttattctacaacctgaacatcgatttttatattagttcattggattacctacactttcaacaatcaaattgcaa 18969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 159047 - 158971
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaa 85  Q
    |||||||||| ||||||||||  ||| |||||||||||||| |||||||| ||||||||||||||| ||| ||||||    
T  159047 tctacaacctgaacatcaatttttatattaattcattggatcacctacaccttcaacaatcaaatttcaattcaaaa 158971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 158943 - 158888
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||| || |||||||||| ||||||||||||||||||||||||| || |||||||    
T  158943 aaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 16718 - 16676
Alignment:
Q  45 tggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||| |||||||||||||||| | ||||||    
T  16718 tggattacctacactttgaacaatcaaattgcaatttaaaacc 16676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 69 - 141
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || |||||||||| |||||||||||||    
T  69 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttc 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 4835 - 4763
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| |||||  | ||||||||||||||||||||||||    
T  4835 aaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaacatgctaaactcaatttc 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 11395 - 11323
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  11395 aaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 11323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 12654 - 12582
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||    
T  12654 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaaactcaatttc 12582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 5314 - 5386
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||    
T  5314 aaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaacttaatttc 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 34270 - 34342
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  34270 aaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaacatgctaaactcaatttc 34342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 58677 - 58749
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  58677 aaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgctaaactcaatttc 58749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 146654 - 146726
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  146654 aaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 146726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 21992 - 22074
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| |||| |||||| ||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||||    
T  21992 ttattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaacc 22074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 9926 - 9977
Alignment:
Q  36 ttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||  |||||||||| ||||||||||||||||||||| ||||||||    
T  9926 ttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaacc 9977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 328411 - 328339
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||    
T  328411 aaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaacatgctaaactcaatttc 328339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 31925 - 31997
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||    
T  31925 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaaactcaatttc 31997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 37232 - 37304
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||    
T  37232 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaaactcaatttc 37304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 77618 - 77690
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||| ||||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  77618 aacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgctaaactcaatttc 77690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 28554 - 28476
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| | ||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  28554 tctacaacctgaccatcaatttttatattaattcattggattacctacaccttcaacaatcaaattgcaattcaaaacc 28476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 28450 - 28395
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaac 248  Q
    ||||| || |||||||||| ||||||| ||||||||||||||||| || |||||||    
T  28450 aaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaac 28395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 35689 - 35611
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||||||||||  ||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  35689 tctacaacctcaacatcaatttttatattaattcattggattatctacaccttcaacaatcaaattgcaattcaaaacc 35611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 35585 - 35514
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| || |||||||||| | ||||||||||||||||||||||| || ||||||  || |||| |||||||    
T  35585 aaccatttgcaacttctaaccttaattcccaaattcccaaaactacaacctacaagttgttaaattcaattt 35514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 35423 - 35493
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||| ||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  35423 aaccaattacgacttcaaaacctaattcccaaattcccaaaact--aacctacaacatgctaaactcaatttc 35493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 35362 - 35424
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaa 67  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||||    
T  35362 ttattctacaacctgaacatcaattcttatgttaatttattggattacatacacttttaacaa 35424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 813 - 745
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||| |||||||||||||||||||||| ||||| || |||||||||| |||||||||||||    
T  813 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttc 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 1136 - 1208
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||| | | ||||| || ||||||||||||||||||||||||    
T  1136 aaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaacatgctaaactcaatttc 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 2155 - 2071
Alignment:
Q  180 ctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||| ||||||  ||||||||||||||| ||||||||||||||||||| ||||||||| || |||||||||| |||| |||||||    
T  2155 ctactattaaaccaaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacatgttaaattcaattt 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 1096 - 1168
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||| ||||||||||| ||||||||    
T  1096 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaacatgctaaattcaatttc 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 449 - 521
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||| |||||||| || ||||| || ||||||||||||||||||||||||    
T  449 aaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaacatgctaaactcaatttc 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 3113 - 3185
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||| ||||| ||||||||    
T  3113 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatactaaagtcaatttc 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 2495 - 2558
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaa 256  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || |||||||||||||||    
T  2495 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaa 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 21914 - 21842
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||||||||||||||||||||| || || || ||||||||||||||| ||||||||    
T  21914 aaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaacatgctaaattcaatttc 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 81501 - 81569
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattt 81569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 113089 - 113018
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||| |||||||    
T  113089 aaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgttaaattcaattt 113018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 117922 - 117890
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  117922 aaccaattacaacttctaaacctaattcccaaa 117890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 169116 - 169048
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||| ||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  169116 aattacaagttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 143542 - 143614
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||| |||| |||||||||||||   | ||||| || ||||||||||||||||||||||||    
T  143542 aaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaacatgctaaactcaatttc 143614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 472 - 557
Alignment:
Q  1 attgttattctacaacctaaacatcaattca--tatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaa 84  Q
    |||||||||||||||||  ||||||||||    ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  472 attgttattctacaacccgaacatcaattgtattatattaattcattgaattacctacactttcaacaatcaaattgcaattcaaa 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 8979 - 8897
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| ||||||||||| || ||||||||||| || ||||||| || ||||||||||||||| || ||||||||    
T  8979 ttattctacaacctgaacatcaattcttacgttaattcattcgactacctactctctcaacaatcaaattgaaattcaaaacc 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 12111 - 12192
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||| || ||||||||    
T  12111 ttattctacaacctgaacatcaattcttatgttaattcattgggttacctactcttt-aacaatcaatttgaaattcaaaacc 12192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 12325 - 12398
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaa-catgctaaactcaatttc 265  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||| || |||||| |||| |||| ||||||||    
T  12325 aacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaatttc 12398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 12220 - 12253
Alignment:
Q  152 attaacatcttaactccaacaatcaattctacaa 185  Q
    ||||||||||||| ||||||||||||||||||||    
T  12220 attaacatcttaattccaacaatcaattctacaa 12253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 135640 - 135554
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||||| || ||||||| || |||| |||||||    
T  135640 ttctactattaaattaaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattt 135554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 78298 - 78234
Alignment:
Q  201 acaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||| |||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttc 78234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 8557 - 8644
Alignment:
Q  178 ttctacaattaaaataaccaattacaacttctaaacctaatt-cccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||| || |||| |||||||    
T  8557 ttctactattaaatcaaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattt 8644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 3173 - 3102
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||| || |||| |||||||    
T  3173 aaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaacttgttaaattcaattt 3102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 24235 - 24180
Alignment:
Q  210 aaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 24180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 1 - 63
Alignment:
Q  9 tctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  1 tctacaacatgaacatcaattcttatgttaattctttggattacctactctttcaacaatcaa 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7699 - 7626
Alignment:
Q  1 attgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    |||||||||||||||||| ||||||||||   | |||||||||||||||| |||||| || |||||||||||||    
T  7699 attgttattctacaacctgaacatcaattttcacgttaattcattggatttcctacatttccaacaatcaaatt 7626  T

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Target: scaffold0308 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13269 - 13345
Alignment:
Q  11 tacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||| ||||||||||  ||| | |||||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  13269 tacaacctgaacatcaatttttatatcaattcattgggttacctacatcttcaacaatcaaattgcaattcaaaacc 13345  T

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Target: scaffold0308; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 13371 - 13442
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| || |||||| ||| ||||||||||||||||||||||||  || ||||||| || |||| |||||||    
T  13371 aaccatttgcaacttttaaccctaattcccaaattcccaaaacttcaacctacaacttgttaaattcaattt 13442  T

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Target: scaffold0462 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 11093 - 11173
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| ||||||| |||| ||||||||||||    
T  11093 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatc-aattccaaatcaaaacc 11173  T

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Target: scaffold0462; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 1174 - 1222
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  1174 attcattggattacctagactttcaacaaccaaattgaaattcaaaacc 1222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 6680 - 6728
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  6680 attcattggattacctagactttcaacaaccaaattgaaattcaaaacc 6728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 10888 - 10834
Alignment:
Q  179 tctacaattaaaataaccaattacaacttctaaacctaattcccaaattcccaaa 233  Q
    ||||| |||| || ||||||||||||||||||| |||||||||||||||||||||    
T  10888 tctactattacaacaaccaattacaacttctaaccctaattcccaaattcccaaa 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 1807 - 1872
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  1807 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 5164 - 5124
Alignment:
Q  185 attaaaataaccaattacaacttctaaacctaattcccaaa 225  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  5164 attacaataaccaattacaacttctaaccctaattcccaaa 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 23483 - 23553
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattg 75  Q
    |||||||||||||| || |||||||   ||||||||||||| ||||||||||||||| |||||| ||||||    
T  23483 ttattctacaacctgaaaatcaattttcatgttaattcatttgattacctacacttttaacaataaaattg 23553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 26560 - 26643
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||| ||||||||||||||||||| |   |  |||||||||  |||||| ||||||||||| ||||||||||||| ||||||||    
T  26560 gttactctacaacctaaacatcaactttcacattaattcatcagattacttacactttcaagaatcaaattgcaattcaaaacc 26643  T

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Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3075 - 3148
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaa 78  Q
    |||||||| ||||  ||||||||||  |||  |||||||||| ||||||||||||||||||||| |||||||||    
T  3075 ttattctaaaaccagaacatcaatttttatactaattcattgaattacctacactttcaacaattaaattgcaa 3148  T

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Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 21959 - 21895
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatca 70  Q
    |||||||||| ||| ||||||||||| ||||||||||||||| ||||||||| |||| ||||||||    
T  21959 ttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt-aacaatca 21895  T

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Target: scaffold0125 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 18296 - 18212
Alignment:
Q  3 tgttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    ||||| ||||||||||||||||||| |   |  ||||||||| ||||||| ||||||||||| ||||||||| ||| ||||||||    
T  18296 tgttactctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaataatcaaattacaattcaaaacc 18212  T

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Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 4617 - 4684
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    |||||||||||||||||||||||| |||||||||||||| | || ||| ||| || |||| |||||||    
T  4617 aattacaacttctaaacctaattctcaaattcccaaaaccacaacctaaaacctgttaaattcaattt 4684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 20202 - 20136
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||||| |||||||||||||||| |||||| || ||||||| || |||| |||||||    
T  20202 aattacaacttctaaacataattcccaaattccc-aaactataacctacaacctgttaaattcaattt 20136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 7206 - 7265
Alignment:
Q  193 aaccaattacaacttctaaacctaa-ttcccaaattcccaaaactaaaatctacaacatg 251  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| || ||||||||||    
T  7206 aaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacatg 7265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 70032 - 69970
Alignment:
Q  8 ttctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    ||||||| ||| ||| ||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  70032 ttctacagcctgaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaa 69970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 4911 - 4964
Alignment:
Q  17 ctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  4911 ctaaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaa 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 8830 - 8895
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  8830 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 4911 - 4964
Alignment:
Q  17 ctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  4911 ctaaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaa 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 20967 - 21032
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  20967 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 21032  T

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Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 14768 - 14703
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||| ||| ||||||| |||||||||| ||| |||||||||| |||| |||||||||    
T  14768 ttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt-aacaatcaa 14703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 23826 - 23761
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||| ||| ||||||| |||||||||| ||| |||||||||| |||| |||||||||    
T  23826 ttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt-aacaatcaa 23761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 29398 - 29333
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  29398 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 29333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 31800 - 31869
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 74  Q
    |||||||||||||  ||||||||||   || |||||||||||||||  |||||||||||| |||||||||    
T  31800 ttattctacaaccagaacatcaattttcattttaattcattggattttctacactttcaaaaatcaaatt 31869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 4836 - 4760
Alignment:
Q  188 aaaataaccaattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||| |||||| ||||||||||||||||||| |||||||||  |||||  || ||||||| || |||| |||||||    
T  4836 aaaatcaccaatgacaacttctaaacctaatttccaaattccacaaacttcaacctacaacttgttaaattcaattt 4760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 18763 - 18731
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  18763 aaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 13879 - 13911
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  13879 aaccaattacaacttctaaacctaattcccaaa 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 19019 - 19066
Alignment:
Q  39 attcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||    
T  19019 attcattggattacctacac-ttcaacaatcaaattgaaattcaaaacc 19066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11321 - 11361
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaa 233  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  11321 aaccaattacaacttcaaaacctaattcccaaattcacaaa 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 19640 - 19709
Alignment:
Q  196 caattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaatttc 265  Q
    |||||||||||||  |||||||||| ||||||| ||||   | || | ||||||||||||||||||||||    
T  19640 caattacaacttcataacctaattctcaaattcacaaattcacaaacaacaacatgctaaactcaatttc 19709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 5201 - 5241
Alignment:
Q  193 aaccaattacaacttctaaacctaattcccaaattcccaaa 233  Q
    |||||||||||||||| |||| |||||||||||||| ||||    
T  5201 aaccaattacaacttcaaaacgtaattcccaaattcacaaa 5241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 1176 - 1109
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaactcaattt 264  Q
    ||||||||||||||| ||||| |||||||||| |||||||  || ||||||| || |||| |||||||    
T  1176 aattacaacttctaaccctaaatcccaaattctcaaaactccaacctacaacttgttaaattcaattt 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 2110 - 2176
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 71  Q
    |||||||||||||| |||| |||||  ||  ||| ||||| ||||||||||| ||||||||||||||    
T  2110 ttattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaatcaa 2176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 43969 - 43888
Alignment:
Q  5 ttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaaatcaaaacc 87  Q
    |||||||||||||||||||||||||  ||   ||||| |||| |||| ||||  ||||||||||| |||| ||||||||||||    
T  43969 ttattctacaacctaaacatcaatttgtacactaattaattgaattatctactttttcaacaatc-aattccaaatcaaaacc 43888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 1543 - 1470
Alignment:
Q  4 gttattctacaacctaaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgca 77  Q
    |||| ||||||||||||||||||| |   |  |||||||||  |||||| ||||||||||| ||||||||||||    
T  1543 gttactctacaacctaaacatcaactttcacattaattcatcagattacttacactttcaagaatcaaattgca 1470  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 67060 - 67105
Alignment:
Q  202 caacttctaaacctaattcccaaattcccaaaactaaaatctacaa 247  Q
    |||||||||||||| ||||||||||||| ||||||| || ||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaa 67105  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 10741 - 10777
Alignment:
Q  197 aattacaacttctaaacctaattcccaaattcccaaa 233  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  10741 aattacaacttcaaaacctaattcccaaattcacaaa 10777  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 9049 - 9101
Alignment:
Q  204 acttctaaacctaattcccaaattcccaaaactaaaatctacaacatgctaaa 256  Q
    |||| ||| |||||||||||||||| ||||| | ||| |||||||||||||||    
T  9049 acttttaaccctaattcccaaattctcaaaaattaaacctacaacatgctaaa 9101  T

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