View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12620_low_17 (Length: 246)

Name: NF12620_low_17
Description: NF12620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12620_low_17
NF12620_low_17
[»] chr6 (14 HSPs)
chr6 (59-223)||(19235048-19235206)
chr6 (112-223)||(30673371-30673481)
chr6 (115-223)||(19167822-19167929)
chr6 (55-195)||(15890708-15890844)
chr6 (55-191)||(7827892-7828024)
chr6 (139-223)||(18982572-18982655)
chr6 (55-191)||(23150287-23150419)
chr6 (121-195)||(24267831-24267905)
chr6 (55-174)||(27329998-27330113)
chr6 (55-174)||(27390738-27390853)
chr6 (121-181)||(18703550-18703610)
chr6 (121-181)||(18709485-18709545)
chr6 (55-191)||(19655231-19655363)
chr6 (55-89)||(19167935-19167969)
[»] chr7 (21 HSPs)
chr7 (55-223)||(24269916-24270079)
chr7 (58-182)||(25943041-25943161)
chr7 (114-182)||(13744667-13744735)
chr7 (55-182)||(10277247-10277370)
chr7 (55-191)||(12372194-12372326)
chr7 (55-191)||(12465260-12465392)
chr7 (55-191)||(32433589-32433721)
chr7 (55-195)||(46386084-46386220)
chr7 (55-191)||(8851159-8851291)
chr7 (121-195)||(12127159-12127233)
chr7 (121-195)||(20586334-20586408)
chr7 (55-181)||(20620206-20620328)
chr7 (55-191)||(11067388-11067520)
chr7 (59-191)||(13147472-13147600)
chr7 (55-195)||(20214067-20214203)
chr7 (121-191)||(12322930-12323000)
chr7 (139-192)||(4690662-4690715)
chr7 (55-195)||(14180394-14180530)
chr7 (137-195)||(44374841-44374899)
chr7 (137-195)||(44383706-44383764)
chr7 (139-195)||(48807321-48807377)
[»] scaffold0112 (1 HSPs)
scaffold0112 (101-219)||(2851-2968)
[»] chr1 (10 HSPs)
chr1 (99-223)||(21168893-21169016)
chr1 (101-178)||(45499354-45499431)
chr1 (55-191)||(19676631-19676763)
chr1 (55-191)||(21046049-21046181)
chr1 (55-195)||(42912969-42913105)
chr1 (121-195)||(16058310-16058384)
chr1 (121-191)||(20633631-20633701)
chr1 (139-216)||(24723327-24723403)
chr1 (139-195)||(7051918-7051974)
chr1 (139-195)||(12710867-12710923)
[»] scaffold0100 (1 HSPs)
scaffold0100 (101-223)||(26603-26725)
[»] chr8 (17 HSPs)
chr8 (117-223)||(20397479-20397584)
chr8 (103-182)||(36305819-36305898)
chr8 (55-182)||(37292625-37292748)
chr8 (121-195)||(6101749-6101823)
chr8 (118-191)||(39936007-39936080)
chr8 (55-191)||(20083638-20083770)
chr8 (116-192)||(23889776-23889852)
chr8 (55-174)||(6202696-6202811)
chr8 (101-192)||(22583659-22583750)
chr8 (55-181)||(5082222-5082344)
chr8 (121-191)||(42817907-42817977)
chr8 (55-174)||(6573073-6573188)
chr8 (139-192)||(4380616-4380669)
chr8 (139-195)||(20022036-20022092)
chr8 (139-195)||(22532128-22532184)
chr8 (139-195)||(22536813-22536869)
chr8 (139-195)||(31722489-31722545)
[»] scaffold0174 (3 HSPs)
scaffold0174 (59-181)||(19630-19748)
scaffold0174 (101-182)||(5224-5305)
scaffold0174 (101-182)||(11344-11425)
[»] chr5 (8 HSPs)
chr5 (55-195)||(31622045-31622173)
chr5 (68-182)||(22111761-22111871)
chr5 (55-195)||(21300040-21300176)
chr5 (55-182)||(7484922-7485045)
chr5 (121-195)||(20566528-20566602)
chr5 (139-195)||(6551286-6551342)
chr5 (139-195)||(18744874-18744930)
chr5 (121-181)||(19921620-19921680)
[»] scaffold0379 (1 HSPs)
scaffold0379 (101-182)||(10760-10841)
[»] scaffold0004 (3 HSPs)
scaffold0004 (99-182)||(75746-75829)
scaffold0004 (101-182)||(72898-72979)
scaffold0004 (122-192)||(328287-328359)
[»] chr4 (13 HSPs)
chr4 (55-195)||(37019590-37019726)
chr4 (55-182)||(6633546-6633669)
chr4 (55-191)||(25091573-25091705)
chr4 (55-191)||(53630474-53630606)
chr4 (55-174)||(46001548-46001663)
chr4 (121-195)||(15115204-15115278)
chr4 (55-191)||(11425863-11425995)
chr4 (55-191)||(19610244-19610376)
chr4 (55-180)||(10356447-10356568)
chr4 (55-191)||(42875717-42875849)
chr4 (55-174)||(16998445-16998560)
chr4 (55-89)||(26921719-26921753)
chr4 (139-195)||(19434555-19434611)
[»] chr3 (21 HSPs)
chr3 (55-195)||(10563628-10563764)
chr3 (55-195)||(40807916-40808052)
chr3 (55-195)||(40812753-40812889)
chr3 (55-191)||(17044886-17045018)
chr3 (55-191)||(22306583-22306715)
chr3 (55-195)||(49900650-49900786)
chr3 (55-182)||(10311447-10311570)
chr3 (114-181)||(35354577-35354644)
chr3 (55-195)||(44274338-44274474)
chr3 (59-191)||(11259355-11259483)
chr3 (55-191)||(17047046-17047178)
chr3 (55-195)||(17518869-17519005)
chr3 (55-195)||(17533731-17533867)
chr3 (139-195)||(35960924-35960980)
chr3 (55-191)||(41172371-41172503)
chr3 (128-191)||(17541423-17541486)
chr3 (121-191)||(17539088-17539158)
chr3 (121-174)||(14508829-14508882)
chr3 (121-174)||(17694049-17694102)
chr3 (139-195)||(15566744-15566800)
chr3 (139-195)||(19568204-19568260)
[»] chr2 (14 HSPs)
chr2 (55-195)||(17307406-17307542)
chr2 (55-191)||(5031129-5031261)
chr2 (55-195)||(24516106-24516242)
chr2 (55-192)||(40912240-40912373)
chr2 (55-191)||(9975849-9975981)
chr2 (55-182)||(37270619-37270742)
chr2 (121-191)||(24436630-24436700)
chr2 (55-191)||(24780840-24780972)
chr2 (55-170)||(22251469-22251580)
chr2 (55-192)||(19201199-19201332)
chr2 (139-195)||(3539837-3539893)
chr2 (121-191)||(2523747-2523817)
chr2 (139-196)||(25142204-25142261)
chr2 (139-195)||(27852668-27852724)
[»] scaffold0111 (2 HSPs)
scaffold0111 (55-182)||(5303-5426)
scaffold0111 (55-195)||(12529-12665)
[»] scaffold1941 (1 HSPs)
scaffold1941 (55-195)||(58-194)
[»] scaffold1283 (1 HSPs)
scaffold1283 (55-191)||(468-600)
[»] scaffold0064 (1 HSPs)
scaffold0064 (55-191)||(58666-58798)
[»] scaffold0001 (3 HSPs)
scaffold0001 (55-195)||(77607-77743)
scaffold0001 (56-191)||(31915-32046)
scaffold0001 (56-191)||(37222-37353)
[»] scaffold0207 (1 HSPs)
scaffold0207 (55-195)||(13388-13524)
[»] scaffold0017 (1 HSPs)
scaffold0017 (139-216)||(26727-26803)
[»] scaffold0007 (2 HSPs)
scaffold0007 (162-223)||(18670-18730)
scaffold0007 (139-223)||(16388-16471)
[»] scaffold0241 (1 HSPs)
scaffold0241 (55-195)||(3102-3238)
[»] scaffold1633 (1 HSPs)
scaffold1633 (121-191)||(1187-1257)
[»] scaffold0956 (1 HSPs)
scaffold0956 (121-195)||(2537-2611)
[»] scaffold0113 (1 HSPs)
scaffold0113 (121-195)||(35472-35546)
[»] scaffold0036 (1 HSPs)
scaffold0036 (121-191)||(78185-78255)
[»] scaffold0019 (1 HSPs)
scaffold0019 (121-191)||(24131-24201)
[»] scaffold0020 (2 HSPs)
scaffold0020 (121-182)||(169008-169069)
scaffold0020 (121-191)||(143593-143663)
[»] scaffold0737 (1 HSPs)
scaffold0737 (55-191)||(4714-4846)
[»] scaffold0334 (1 HSPs)
scaffold0334 (55-195)||(438-574)
[»] scaffold0026 (1 HSPs)
scaffold0026 (55-195)||(146643-146779)
[»] scaffold1766 (1 HSPs)
scaffold1766 (55-182)||(705-828)
[»] scaffold0285 (1 HSPs)
scaffold0285 (121-216)||(19735-19829)
[»] scaffold0149 (1 HSPs)
scaffold0149 (124-195)||(29569-29640)
[»] scaffold0080 (1 HSPs)
scaffold0080 (55-191)||(21793-21925)
[»] scaffold0256 (1 HSPs)
scaffold0256 (116-182)||(1856-1922)
[»] scaffold0047 (1 HSPs)
scaffold0047 (121-191)||(79031-79101)
[»] scaffold0059 (1 HSPs)
scaffold0059 (166-223)||(49756-49812)
[»] scaffold0407 (1 HSPs)
scaffold0407 (55-191)||(11274-11406)
[»] scaffold0203 (1 HSPs)
scaffold0203 (139-195)||(17936-17992)
[»] scaffold0077 (1 HSPs)
scaffold0077 (55-191)||(34259-34391)
[»] scaffold0041 (1 HSPs)
scaffold0041 (130-182)||(5716-5768)
[»] scaffold0516 (1 HSPs)
scaffold0516 (143-192)||(5304-5353)
[»] scaffold0802 (1 HSPs)
scaffold0802 (139-195)||(4705-4761)
[»] scaffold0213 (1 HSPs)
scaffold0213 (139-195)||(19207-19263)
[»] scaffold0056 (1 HSPs)
scaffold0056 (139-195)||(67121-67177)
[»] scaffold0032 (1 HSPs)
scaffold0032 (139-195)||(61844-61900)


Alignment Details
Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 19235048 - 19235206
Alignment:
Q  59 tattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaaccta 158  Q
    ||||||||| |||||||||||||||||||||      || |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  19235048 tattaacaaccaattacgacttcaaaacctaa-----tcccaaattcacaaattcacaaacaacaacatcctaaaatcaatttcagaattatacaaccta 19235142  T
Q  159 aagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctacaagcttt 223  Q
    || ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  19235143 aaattagagaaagttaatcccacccttaacttaga-ttggttgattacaaggttctacaagcttt 19235206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 30673481 - 30673371
Alignment:
Q  112 tcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggt 211  Q
    |||||||||||| ||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  30673481 tcacaaacaacatcatgctaaactcaatttcaaaattatacaacctaaaattagagaaagttaatcccacccttaccttaga-ttggttgattacaaggt 30673383  T
Q  212 tctacaagcttt 223  Q
    ||||||||||||    
T  30673382 tctacaagcttt 30673371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 19167929 - 19167822
Alignment:
Q  115 caaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttct 214  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||  ||||| ||||||||| ||||| ||| |||||| ||||||||||||||||||||    
T  19167929 caaacaacaacatgctaaactcaatatcagaattatacaacctaatattagacaaagttaattccacccttaccttaga-ttggttgattacaaggttct 19167831  T
Q  215 acaagcttt 223  Q
    |||||||||    
T  19167830 acaagcttt 19167822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 15890844 - 15890708
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    ||||||||||||| ||||||| |||||||||||||    | || |||||| |||||   |||| | |||||||| |||| | ||||||||||||||||||    
T  15890844 actctattaacaaccaattacaacttcaaaaccta----attcccaaattaacaaaactacaacctacaacatgttaaactcaatttcagaattatacaa 15890749  T
Q  155 cctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    | || | ||||||||||||| ||||||| ||| ||||||||    
T  15890748 cttagaattagagaaagttagtcccacccttaccttagatt 15890708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 7827892 - 7828024
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  7827892 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 7827986  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  7827987 acttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 18982572 - 18982655
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctacaagcttt 223  Q
    |||||||||||||||||| |   ||||| ||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||    
T  18982572 tttcagaattatacaacccattattagataaagttaatcccaccgttaccttaga-ttgattgattacaaggttctacaagcttt 18982655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 23150419 - 23150287
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  23150419 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 23150325  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  23150324 acttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 24267831 - 24267905
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||| ||||    
T  24267831 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctttgatt 24267905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 27330113 - 27329998
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||  || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  27330113 actctattaacaaccaattacaacttcaaaaccta----attcccaaattgccataact-acaacctacaacatgttaaactcaatttcagaattataca 27330019  T
Q  154 acctaaagttagagaaagtta 174  Q
    ||||| | |||||||||||||    
T  27330018 acctagaattagagaaagtta 27329998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 27390853 - 27390738
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||  || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  27390853 actctattaacaaccaattacaacttcaaaaccta----attcccaaattgccataact-acaacctacaacatgttaaactcaatttcagaattataca 27390759  T
Q  154 acctaaagttagagaaagtta 174  Q
    ||||| | |||||||||||||    
T  27390758 acctagaattagagaaagtta 27390738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 18703550 - 18703610
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccac 181  Q
    ||||||| ||||| | ||||||||||||||||||| || | ||||||||||||| ||||||    
T  18703550 acaacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccac 18703610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 18709485 - 18709545
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccac 181  Q
    ||||||| ||||| | ||||||||||||||||||| || | ||||||||||||| ||||||    
T  18709485 acaacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccac 18709545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 19655363 - 19655231
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    |||||||||||||  |||||| |||||||||||||    | || ||||||| || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  19655363 actctattaacaactaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgttaaactcaatttcagaattataca 19655269  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| || |||| ||| ||||    
T  19655268 acttagaattagagaaagttagtctcacccttacctta 19655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 19167969 - 19167935
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaaccta 89  Q
    ||||||||||||| |||||||||||||||||||||    
T  19167969 actctattaacaaccaattacgacttcaaaaccta 19167935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 24270079 - 24269916
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    ||||||||||||| |||||||||||||||||||||    | || ||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  24270079 actctattaacaaccaattacgacttcaaaaccta----attcccaacttcacaaattcacaaacaacaacatgctaaactcaatttcagaattatacaa 24269984  T
Q  155 cctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctacaagcttt 223  Q
    | |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  24269983 cttaaaattagagaaagttaatcccacccttaccttaga-ttggttgattacaaggttctacaagcttt 24269916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 25943041 - 25943161
Alignment:
Q  58 ctattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacct 157  Q
    |||||||||| |||||||||||||||||||||    | |  |||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||     
T  25943041 ctattaacaaccaattacgacttcaaaaccta----atttccaaattcacaaattcacaaacaacaacatgctaaattcaatttcagaattatacaaccc 25943136  T
Q  158 aaagttagagaaagttaatcccacc 182  Q
    ||| |||||||||||||||||||||    
T  25943137 aaaattagagaaagttaatcccacc 25943161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 13744735 - 13744667
Alignment:
Q  114 acaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||    
T  13744735 acaaacaacaacatgctaaacttaatttcagaattatacaacctaaaattagagaaagttaatcccacc 13744667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 10277247 - 10277370
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  10277247 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgctaaacttaatttcagaattataca 10277341  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  10277342 acgtagaattagagaaagttagtcccacc 10277370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 12372194 - 12372326
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| |  |||||||||||| | |||||||||||||||||    
T  12372194 actctattaacaaccaattacaacttcaaaaccta----attctcaaattcccataact-acaacctgcaacatgctaaactcaatttcagaattataca 12372288  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  12372289 acttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 12465392 - 12465260
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  12465392 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 12465298  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  12465297 acttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 32433721 - 32433589
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || |||||||||| |||| |||| | ||||||||||||| | |||||||||||||||||    
T  32433721 actctattaacaaccaattacaacttcaaaaccta----attcacaaattcacataact-acaacctacaacatgctaaactcaatttcagaattataca 32433627  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| || |||| ||| ||||    
T  32433626 acttagaattagagaaagttagtctcacccttacctta 32433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 46386220 - 46386084
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | |||||||  |||| | |||||||||||||||||    
T  46386220 actctattaacaaccaattacaacttcaaaaccta----attctcaaattcccataact-acaacctacaacatattaaactcaatttcagaattataca 46386126  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||| ||| ||||||||||||    
T  46386125 acttagaattagagaaagttagtcctacccttatcttagatt 46386084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 8851291 - 8851159
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |  ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  8851291 actctattaacaaccaattacaacttcaaaaccta----atttccaaattctcataact-acaacctacaacatgctaaactcaatttcagaattataca 8851197  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  8851196 acttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 12127233 - 12127159
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||| |||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  12127233 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagatt 12127159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 20586334 - 20586408
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||| |||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  20586334 acaacatggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagatt 20586408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 20620206 - 20620328
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||  || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  20620206 actctattaacaaccaattacaacttcaaaaccta----attcccaaatttccataact-acaacctacaacatgctaaactcaatttcagaattataca 20620300  T
Q  154 acctaaagttagagaaagttaatcccac 181  Q
    || || | ||||||||||||| ||||||    
T  20620301 acttagaattagagaaagttagtcccac 20620328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 11067388 - 11067520
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| || ||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  11067388 actctattaacaaccaattactacatcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 11067482  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| || |||| ||| ||||    
T  11067483 acttagaattagagaaagttagtctcacccttacctta 11067520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 13147600 - 13147472
Alignment:
Q  59 tattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattatacaacct 157  Q
    ||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | ||||||||||||||| ||| |    
T  13147600 tattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattatataactt 13147506  T
Q  158 aaagttagagaaagttaatcccacctttatctta 191  Q
    | | ||||||||||||| ||||||| ||| ||||    
T  13147505 agaattagagaaagttagtcccacccttacctta 13147472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 20214067 - 20214203
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||| ||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  20214067 actctattaacaaccaattacaacttcaaaactta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 20214161  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||  | | || |||||||||| ||||||| ||| ||||||||    
T  20214162 actcagaatttgagaaagttagtcccacccttaccttagatt 20214203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 12323000 - 12322930
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| | ||||| ||| ||||    
T  12323000 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttacctta 12322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 4690715 - 4690662
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttag 192  Q
    ||||||||||||||||| || | ||||||||||||| ||||||||||| |||||    
T  4690715 tttcagaattatacaacttagaattagagaaagttagtcccacctttaccttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 14180530 - 14180394
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||| ||    | || ||||||| || |||| |||| | |||| |||||||| | |||||||||||||||||    
T  14180530 actctattaacaaccaattacaacttcaaaacata----attcccaaattcccataact-acaacctacaatatgctaaactcaatttcagaattataca 14180436  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||| ||| || |||| ||| ||||||||    
T  14180435 acttagaattagagaaaattagtcacacccttaccttagatt 14180394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 44374841 - 44374899
Alignment:
Q  137 aatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||||| || | ||||||||||||| || |||| ||| ||||||||    
T  44374841 aatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagatt 44374899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 44383706 - 44383764
Alignment:
Q  137 aatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||||| || | ||||||||||||| || |||| ||| ||||||||    
T  44383706 aatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagatt 44383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 48807377 - 48807321
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || || | ||||||||||||| ||||||| ||| ||||||||    
T  48807377 tttcagaattataccacttagaattagagaaagttagtcccacccttaccttagatt 48807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 2851 - 2968
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggtt 200  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||||    
T  2851 aattcacaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttaga-ttggtt 2949  T
Q  201 gattacaaggttctacaag 219  Q
     ||||||||||||||||||    
T  2950 aattacaaggttctacaag 2968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 21168893 - 21169016
Alignment:
Q  99 caaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttgg 198  Q
    |||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| ||||| ||| |||||| ||||    
T  21168893 caaattcacaaattcacaaacaacaacatgctaaactcaattttagaattatacaacctaaaattagagaaagttaattccacccttaccttaga-ttgg 21168991  T
Q  199 ttgattacaaggttctacaagcttt 223  Q
    |||||||||||||||||| ||||||    
T  21168992 ttgattacaaggttctacgagcttt 21169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 45499354 - 45499431
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcc 178  Q
    ||||| |||| ||||||| ||||| |||||||| | |||||||||||||||||||||||| ||||||| |||||||||    
T  45499354 aattcccaaattcacaaataacaatatgctaaactcaatttcagaattatacaacctaaaattagagagagttaatcc 45499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 19676631 - 19676763
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  19676631 actctattaacaaccaattacaacttcaaaaccta----attcccaaattctcataact-acaacctacaacatgctaaactcaatttcagaattataca 19676725  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  19676726 acttagaattagagaaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 21046181 - 21046049
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||| ||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  21046181 actctattaacaaccaattacaacttcaaaactta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 21046087  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  21046086 acttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 42912969 - 42913105
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | ||  |||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  42912969 actctattaacaaccaattacaacttcaaaaccta----attcctaaattcccacaact-acaacctacaacatgctaaactcaatttcagaattataca 42913063  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| || |||| ||| ||||||||    
T  42913064 acttagaattagagaaagttagtctcacccttaccttagatt 42913105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 16058384 - 16058310
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||| ||| ||||||| ||| ||||||||    
T  16058384 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagatt 16058310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 20633701 - 20633631
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | |||||| |||||| ||||||| ||||||||    
T  20633701 acaacatgctaaactcaatttcagaattatacaacttagaattagagcaagttagtcccacccttatctta 20633631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 24723403 - 24723327
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctac 216  Q
    ||||||||| ||||||| || | ||||||||||||| ||||||| ||| |||||| ||| |||||  |||||||||||    
T  24723403 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaga-ttgattgatcgcaaggttctac 24723327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 7051974 - 7051918
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||| ||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  7051974 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagatt 7051918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 12710867 - 12710923
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||||||| ||  |||||||||| || ||||| ||||| ||||||||    
T  12710867 tttcagaattatacaacccaatattagagaaagctagtcccatctttaccttagatt 12710923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 26725 - 26603
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaattt-cagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggt 199  Q
    ||||| |||| |||||||||||||||||||||| | ||||| ||||||||||||||||||| ||| ||||||||||||||||| |||  ||||| |||||    
T  26725 aattcccaaattcacaaacaacaacatgctaaactcaattttcagaattatacaacctaaaattaaagaaagttaatcccacccttactttaga-ttggt 26627  T
Q  200 tgattacaaggttctacaagcttt 223  Q
    ||||||||||||||||||||||||    
T  26626 tgattacaaggttctacaagcttt 26603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 20397584 - 20397479
Alignment:
Q  117 aacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctac 216  Q
    ||||||||||||||||| | ||||||||||||||||||| || | ||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  20397584 aacaacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttaatcccacccttaccttaga-ttggttgattacaaggttctac 20397486  T
Q  217 aagcttt 223  Q
    |||||||    
T  20397485 aagcttt 20397479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 36305819 - 36305898
Alignment:
Q  103 ttcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    |||||||| |||||||||||||||||||||| | ||||||| |||||||||||||||| ||| |||||||||||| ||||    
T  36305819 ttcacaaattcacaaacaacaacatgctaaactcaatttcataattatacaacctaaaattaaagaaagttaatcacacc 36305898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 37292625 - 37292748
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  37292625 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgctaaacttaatttcagaattataca 37292719  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  37292720 acgtagaattagagaaagttagtcccacc 37292748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 6101823 - 6101749
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||   ||||||||||||||||||| || | ||||||||||||| ||||||||||| ||||||||    
T  6101823 acaacatgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttaccttagatt 6101749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 39936080 - 39936007
Alignment:
Q  118 acaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    |||||||||||||||| | ||||||| ||||||||||| || | ||||||||||||||||||||| ||| ||||    
T  39936080 acaacaacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttacctta 39936007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 20083770 - 20083638
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  20083770 actctattaacaaccaattacaacttcaaaaccta----attcccaaattctcataact-acaacctacaacatgctaaactcaatttcagaattataca 20083676  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| || |||| ||| ||||    
T  20083675 acttagaattagagaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 23889776 - 23889852
Alignment:
Q  116 aaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttag 192  Q
    ||||||| ||||| |||| | |||||||||||||||||||||| | |||||||||||||||| |||| ||| |||||    
T  23889776 aaacaactacatgttaaattcaatttcagaattatacaacctagaattagagaaagttaatctcacccttagcttag 23889852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 6202696 - 6202811
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||| ||| | |||||||||||||||||    
T  6202696 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgcaaaattcaatttcagaattataca 6202790  T
Q  154 acctaaagttagagaaagtta 174  Q
    || || | |||||||||||||    
T  6202791 acgtagaattagagaaagtta 6202811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 22583750 - 22583659
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttag 192  Q
    ||||| |||| ||| ||||||| ||||| |||| | |||||||||||||||||||||| | ||| |||| |||||||||||| ||| |||||    
T  22583750 aattcccaaattcataaacaactacatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttaccttag 22583659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 5082344 - 5082222
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | ||||||| |||||||||    
T  5082344 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcataattataca 5082250  T
Q  154 acctaaagttagagaaagttaatcccac 181  Q
    || || | ||||||||||||| ||||||    
T  5082249 acttagaattagagaaagttagtcccac 5082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 42817977 - 42817907
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||| | ||||||| ||| ||||    
T  42817977 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttacctta 42817907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 6573188 - 6573073
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| ||||||||||||     | || ||||||| || |||| |||| | ||||||||||||| | ||||||| |||||||||    
T  6573188 actctattaacaaccaattacaacttcaaaacctc----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcaaaattataca 6573094  T
Q  154 acctaaagttagagaaagtta 174  Q
    || || | |||||||||||||    
T  6573093 acttagaattagagaaagtta 6573073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 4380669 - 4380616
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttag 192  Q
    ||||||||||||||||| || | ||||||||||||| ||||||| ||| |||||    
T  4380669 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 20022092 - 20022036
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || || | ||||||||||||| ||||||| ||| ||||||||    
T  20022092 tttcagaattataccacttagaattagagaaagttagtcccacccttaccttagatt 20022036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 22532184 - 22532128
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||| ||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  22532184 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagatt 22532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 22536869 - 22536813
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||| ||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  22536869 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagatt 22536813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 31722545 - 31722489
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||| |||||||| || || | ||||||||||||| ||||||| ||||||||||||    
T  31722545 tttcaaaattataccacttagaattagagaaagttagtcccacccttatcttagatt 31722489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 19630 - 19748
Alignment:
Q  59 tattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaaccta 158  Q
    ||||||||||||||||| |||||| ||||||    | ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||    
T  19630 tattaacaatcaattacaacttcataaccta----attctcaaattcacaaattcacaaacaacaacatgctaaactcaatttcagaattatataaccta 19725  T
Q  159 aagttagagaaagttaatcccac 181  Q
    |  ||||||||| ||||||||||    
T  19726 agattagagaaatttaatcccac 19748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 5224 - 5305
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    ||||| |||| |||||||||||||||||| ||| | |||||||||||||||||||||||  |||||||||||||||||||||    
T  5224 aattcccaaattcacaaacaacaacatgcaaaactcaatttcagaattatacaacctaagattagagaaagttaatcccacc 5305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 11344 - 11425
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    ||||| |||| |||||||||||||||||| ||| | ||||||||||| |||||||||||  |||||||||||||||||||||    
T  11344 aattcccaaattcacaaacaacaacatgcaaaactcaatttcagaatgatacaacctaagattagagaaagttaatcccacc 11425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 31622045 - 31622173
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    ||||||||||||| |||||||||||||||||||||            |||| |||| | |||||||||||||||||||| | ||||||||||||||||||    
T  31622045 actctattaacaaccaattacgacttcaaaaccta------------attcccaaatttacaaacaacaacatgctaaactcaatttcagaattatacaa 31622132  T
Q  155 cctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||| ||||||||||||||||||||| ||| ||||||||    
T  31622133 cctaaaattagagaaagttaatcccacccttaccttagatt 31622173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 22111761 - 22111871
Alignment:
Q  68 tcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagag 167  Q
    ||||||||||||| ||||||||    | |||||||||| |||| |||||||||||||||||||||| | ||||||| |||||||||||| ||| ||||||    
T  22111761 tcaattacgacttgaaaaccta----attctcaaattcgcaaattcacaaacaacaacatgctaaactcaatttcaaaattatacaaccaaaaattagag 22111856  T
Q  168 aaagttaatcccacc 182  Q
    |||||||||||||||    
T  22111857 aaagttaatcccacc 22111871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 21300176 - 21300040
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| || | | ||||||||||||| | |||||||||||||||||    
T  21300176 actctattaacaaccaattacaacttcaaaaccta----attctcaaattcccataact-actacctacaacatgctaaacttaatttcagaattataca 21300082  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || |||| ||||||||||||| ||||||| ||| ||||||||    
T  21300081 acttaaaattagagaaagttagtcccacccttaccttagatt 21300040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 7484922 - 7485045
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  7484922 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgctaaactcaatttcagaattataca 7485016  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  7485017 acgtagaattagagaaagttagtcccacc 7485045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 20566528 - 20566602
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||| | ||||||||||||||||||| |  | ||||||||||||| || |||| ||| ||||||||    
T  20566528 acaacatgctaaactcaatttcagaattatacaactttgaattagagaaagttagtctcacccttaccttagatt 20566602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 6551342 - 6551286
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||| || | ||||||||||||| || |||| ||| ||||||||    
T  6551342 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagatt 6551286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 18744874 - 18744930
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||||||| |   ||||||||||||| ||||||| ||| ||||||||    
T  18744874 tttcagaattatacaacccattattagagaaagttagtcccacccttaccttagatt 18744930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 19921620 - 19921680
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccac 181  Q
    |||||||| |||| | ||||||||||||||||||| || | |||||||||| || ||||||    
T  19921620 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaaggtagtcccac 19921680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 10760 - 10841
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    ||||| |||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||    
T  10760 aattcccaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacc 10841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 75746 - 75829
Alignment:
Q  99 caaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    |||||||||||| | |||||||||||||||||| | | |||||||||||||||||||||||  |||||||||||||||||||||    
T  75746 caaattcacaaatttacaaacaacaacatgctacactcaatttcagaattatacaacctaagattagagaaagttaatcccacc 75829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 72898 - 72979
Alignment:
Q  101 aattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    |||||||||| |||| ||||||||||| ||||| | ||||| |||||||||||||||||  || ||||||||||||||||||    
T  72898 aattcacaaattcactaacaacaacatactaaactcaattttagaattatacaacctaagattggagaaagttaatcccacc 72979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 328359 - 328287
Alignment:
Q  122 caacatgctaaaatgaatttcagaattatacaacctaaag--ttagagaaagttaatcccacctttatcttag 192  Q
    |||||||||||| | ||||||||||||||||||| || ||  ||||||||||||| ||||||| ||| |||||    
T  328359 caacatgctaaactcaatttcagaattatacaacttagagaattagagaaagttagtcccacccttaccttag 328287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 37019590 - 37019726
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  37019590 actctattaacaaccaattacaacttcaaaaccta----attctcaaattcccataact-acaacctacaacatgttaaactcaatttcagaattataca 37019684  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || |||| ||||||||||||| || |||| ||| ||||||||    
T  37019685 acttaaaattagagaaagttagtcacacccttaccttagatt 37019726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 6633669 - 6633546
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  6633669 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgctaaacttaatttcagaattataca 6633575  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  6633574 acgtagaattagagaaagttagtcccacc 6633546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 25091573 - 25091705
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  25091573 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 25091667  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  25091668 acttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 53630606 - 53630474
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  53630606 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 53630512  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  53630511 acttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 46001663 - 46001548
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  46001663 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgctaaacttaatttcagaattataca 46001569  T
Q  154 acctaaagttagagaaagtta 174  Q
    || || | |||||||||||||    
T  46001568 acgtagaattagagaaagtta 46001548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 15115204 - 15115278
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  15115204 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagatt 15115278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 11425863 - 11425995
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| | |||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  11425863 actctattaacaaccaattacaatttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 11425957  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  11425958 acttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 19610244 - 19610376
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| || ||||||| ||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  19610244 actctattaacaaccaattacaacgtcaaaactta----attctcaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 19610338  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || |||| ||||||||||||| || |||| ||| ||||    
T  19610339 acttaaaattagagaaagttagtctcacccttacctta 19610376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 10356568 - 10356447
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||| | ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  10356568 actctattaactaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 10356474  T
Q  154 acctaaagttagagaaagttaatccca 180  Q
    || || | ||||||||||||| |||||    
T  10356473 acttagaattagagaaagttagtccca 10356447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 42875717 - 42875849
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||||||||||| ||||||||||    |||  || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  42875717 actctattaacaatcaattacaacttcaaaac----ctatttcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 42875811  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||| | ||||||| ||||||| ||| ||||    
T  42875812 acttagaattatataaagttagtcccacccttacctta 42875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 16998445 - 16998560
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | ||||||| |||||||||    
T  16998445 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcataattataca 16998539  T
Q  154 acctaaagttagagaaagtta 174  Q
    || || | |||||||||||||    
T  16998540 acttagaattagagaaagtta 16998560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 26921753 - 26921719
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaaccta 89  Q
    ||||||||||||| |||||||||||||||||||||    
T  26921753 actctattaacaaccaattacgacttcaaaaccta 26921719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 19434611 - 19434555
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||| ||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  19434611 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagatt 19434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 10563628 - 10563764
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||  || |||| |||||| ||||||||||||| | ||||||| |||||||||    
T  10563628 actctattaacaaccaattacaacttcaaaaccta----attcccaaatttccataact-acaaactacaacatgctaaactcaatttcataattataca 10563722  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || |||| ||||||||||||| ||||||| ||| ||||||||    
T  10563723 acttaaaattagagaaagttagtcccaccattaccttagatt 10563764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 40807916 - 40808052
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  40807916 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 40808010  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||||||||    
T  40808011 acttagaattagagaaagttagtcccacccttaccttagatt 40808052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 40812753 - 40812889
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||||||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||| ||    
T  40812753 actctattaacaatcaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattatgca 40812847  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||||||||    
T  40812848 acttagaattagagaaagttagtcccacccttaccttagatt 40812889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 17044886 - 17045018
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  17044886 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 17044980  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  17044981 acttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 22306715 - 22306583
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  22306715 actctattaacaaccaattacaacttcaaaaccta----attcacaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 22306621  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  22306620 acttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 49900650 - 49900786
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  49900650 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 49900744  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||| ||| ||||||| ||| ||||||||    
T  49900745 acttagaattagagaaaattagtcccacccttaccttagatt 49900786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 10311447 - 10311570
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||| ||| | |||||||||||||||||    
T  10311447 actctattaacaaccaattacaacttcaaaaccta----attctcaaattctcataact-acaacctacaacatgcaaaattcaatttcagaattataca 10311541  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  10311542 acgtagaattagagaaagttagtcccacc 10311570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 35354577 - 35354644
Alignment:
Q  114 acaaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccac 181  Q
    |||| ||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||| ||||||    
T  35354577 acaaccaacaacatgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtcccac 35354644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 44274338 - 44274474
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||  ||  ||| || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  44274338 actctattaacaaccaattacaacttcaaaa--ta--taattcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 44274432  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||||||||    
T  44274433 acttagaattagagaaagttagtcccacccttaccttagatt 44274474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 11259355 - 11259483
Alignment:
Q  59 tattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattatacaacct 157  Q
    ||||||||||||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | ||||||||||||||||||| |    
T  11259355 tattaacaatcaattacaacttcaaaaccta----attcccaaattctcataact-acaatctacaacatgctaaattcaatttcagaattatacaactt 11259449  T
Q  158 aaagttagagaaagttaatcccacctttatctta 191  Q
    | | ||||||||||||| || |||| ||| ||||    
T  11259450 agaattagagaaagttagtctcacccttacctta 11259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 17047046 - 17047178
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||| ||    | || |||||||| | |||| |||| | ||||||||||||| | |||||||||||||||||    
T  17047046 actctattaacaaccaattacaacttcaaaactta----attcccaaattcaaataact-acaacctacaacatgctaaactcaatttcagaattataca 17047140  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  17047141 acttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 17519005 - 17518869
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||| ||||| | |||||||||||||||||    
T  17519005 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacattctaaagtcaatttcagaattataca 17518911  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||  ||||||||    
T  17518910 acttagaattagagaaagttagtcccacccttgccttagatt 17518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 17533867 - 17533731
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||| ||||| | |||||||||||||||||    
T  17533867 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacattctaaagtcaatttcagaattataca 17533773  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||  ||||||||    
T  17533772 acttagaattagagaaagttagtcccacccttgccttagatt 17533731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 35960980 - 35960924
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || || | ||||||||||||||||||||| ||| ||||||||    
T  35960980 tttcagaattataccacatagaattagagaaagttaatcccacccttaccttagatt 35960924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 41172503 - 41172371
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || | ||||| || |||| |||| | ||||||||||||| | ||||||||| |||||||    
T  41172503 actctattaacaaccaattacaacttcaaaaccta----attccctaattcccataact-acaacctacaacatgctaaactcaatttcagagttataca 41172409  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || |  |||||||||||| ||||||| ||| ||||    
T  41172408 acttataagtagagaaagttagtcccacccttacctta 41172371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 17541423 - 17541486
Alignment:
Q  128 gctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    |||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||    
T  17541423 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 17539088 - 17539158
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    |||||||| |||||| ||||||||||||||||||| || | ||||| ||||||| || |||| ||| ||||    
T  17539088 acaacatgataaaatcaatttcagaattatacaacttagaattagataaagttagtctcacccttacctta 17539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 14508829 - 14508882
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagtta 174  Q
    ||||||||||||  | ||||||||||||||||||| || | |||||||||||||    
T  14508829 acaacatgctaacctcaatttcagaattatacaacttagaattagagaaagtta 14508882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 17694049 - 17694102
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagtta 174  Q
    ||||||||||||| | ||||| ||||||||||||| || | |||||||||||||    
T  17694049 acaacatgctaaactcaattttagaattatacaacttagaattagagaaagtta 17694102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 15566744 - 15566800
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||| || | ||||||||||||| ||||||| |||  |||||||    
T  15566744 tttcagaattatacaacttagaattagagaaagttagtcccacccttactttagatt 15566800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 19568260 - 19568204
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||| ||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  19568260 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagatt 19568204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 17307406 - 17307542
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  17307406 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 17307500  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||||||||    
T  17307501 acttagaattagagaaagttagtcccacccttaccttagatt 17307542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 5031261 - 5031129
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  5031261 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 5031167  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  5031166 acttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 24516106 - 24516242
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  24516106 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgttaaactcaatttcagaattataca 24516200  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||||||||    
T  24516201 acttagaattagagaaagttagtcccacccttaccttagatt 24516242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 40912240 - 40912373
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||| ||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  40912240 actctattaacaaccaactacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 40912334  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttag 192  Q
    || || | ||||||||||||| ||||||| ||| |||||    
T  40912335 acttagaattagagaaagttagtcccacccttaccttag 40912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 9975849 - 9975981
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  9975849 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 9975943  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||| ||| ||| ||||    
T  9975944 acttagaattagagaaagttagtccaacccttacctta 9975981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 37270619 - 37270742
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| | ||||| |||||||||| ||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  37270619 actctattaacaacccattacaacttcaaaactta----attctcaaattctcataact-acaacctacaacatgctaaactcaatttcagaattataca 37270713  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  37270714 acgtagaattagagaaagttagtcccacc 37270742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 24436630 - 24436700
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | || |||||||||| ||||||| ||||||||    
T  24436630 acaacatgctaaactcaatttcagaattatacaacttagaattcgagaaagttagtcccacccttatctta 24436700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 24780972 - 24780840
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||  ||||||||| | |||||||||||||||||    
T  24780972 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacttcatgctaaactcaatttcagaattataca 24780878  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  24780877 acttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 22251580 - 22251469
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  22251580 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 22251486  T
Q  154 acctaaagttagagaaa 170  Q
    || || | |||||||||    
T  22251485 acttagaattagagaaa 22251469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 19201332 - 19201199
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || |||||||  | |||| |||| | |||||||| |||| | |||||||||||||||||    
T  19201332 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcctataact-acaacctacaacatgataaactcaatttcagaattataca 19201238  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttag 192  Q
    || || | ||||||||||||| || |||| ||| |||||    
T  19201237 acttagaattagagaaagttagtctcacccttaacttag 19201199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 3539837 - 3539893
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || |||| ||||||||||||| ||||||| ||| ||||||||    
T  3539837 tttcagaattataccacttaaaattagagaaagttagtcccacccttaccttagatt 3539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 2523817 - 2523747
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    |||||||| |||| | ||||| ||||||||||||| || | ||||||||||||| ||||||| ||| ||||    
T  2523817 acaacatgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttacctta 2523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 25142204 - 25142261
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagattt 196  Q
    |||||||||||||| || || | ||||||||||||| ||||||| ||| |||||||||    
T  25142204 tttcagaattataccacttagaattagagaaagttagtcccacccttaccttagattt 25142261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 27852668 - 27852724
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || || | ||||||||||||| ||||||| ||| ||||||||    
T  27852668 tttcagaattataccacttagaattagagaaagttagtcccacccttaccttagatt 27852724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 5303 - 5426
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| |||||||||||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  5303 actctattaacaaccaattacgacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaacttaatttcagaattataca 5397  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  5398 acttagaattagagaaagttagtcccacc 5426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 12665 - 12529
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | | ||||||||||| | |||||||||||||||||    
T  12665 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctataacatgctaaactcaatttcagaattataca 12571  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||| ||||    
T  12570 acttagaattagagaaagttattcccacccttaccttggatt 12529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 58 - 194
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  58 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgttaaactcaatttcagaattataca 152  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||||||| ||| ||||||||    
T  153 acttagaattagagaaagttagtcccacccttaccttagatt 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 600 - 468
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  600 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 506  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  505 acttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 58666 - 58798
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||| ||||    
T  58666 actctattaacaaccaattacaacttcaaaaccta----attctcaaattcccataact-acaacctacaacatgctaaactcaatttcagaattgtaca 58760  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||||||| ||| ||||    
T  58761 acttagaattagagaaagttagtcccacccttacctta 58798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 77607 - 77743
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| | ||||| |||||||||||||    | |||||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  77607 actctattaacaacctattacaacttcaaaaccta----attctcaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 77701  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| || |||| ||| ||||||||    
T  77702 acttagaattagagaaagttagtctcacccttaccttagatt 77743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 31915 - 32046
Alignment:
Q  56 ctctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    |||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | | ||||||||||| | ||||||||||||||||||    
T  31915 ctctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctataacatgctaaactcaatttcagaattatacaa 32009  T
Q  155 cctaaagttagagaaagttaatcccacctttatctta 191  Q
    | || | ||||||||||||| || |||| ||| ||||    
T  32010 cttagaattagagaaagttagtcacacccttacctta 32046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 37222 - 37353
Alignment:
Q  56 ctctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    |||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | | ||||||||||| | ||||||||||||||||||    
T  37222 ctctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctataacatgctaaactcaatttcagaattatacaa 37316  T
Q  155 cctaaagttagagaaagttaatcccacctttatctta 191  Q
    | || | ||||||||||||| || |||| ||| ||||    
T  37317 cttagaattagagaaagttagtcacacccttacctta 37353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 13524 - 13388
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    ||||||||||||| ||||||  |||||||||||||    | || ||||||| ||||   |||| | ||||||||||||| | ||||||||||||||||||    
T  13524 actctattaacaaccaattataacttcaaaaccta----attcccaaattcccaaaactacaacctacaacatgctaaactcaatttcagaattatacaa 13429  T
Q  155 cctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    | |  | ||||||||||||| ||||||| ||| ||||||||    
T  13428 cttggaattagagaaagttagtcccacccttaccttagatt 13388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 26727 - 26803
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctac 216  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| | |||| ||| |||||  |||||||||||    
T  26727 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccgtaga-ttgattgatcgcaaggttctac 26803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 18730 - 18670
Alignment:
Q  162 ttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctacaagcttt 223  Q
    ||||||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||    
T  18730 ttagagaaagttaatcccaccctcaccttagatt-ggttgattacaaggttctacaagcttt 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 16471 - 16388
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctacaagcttt 223  Q
    |||||||||||||||||| |   ||||| |||||||||| |||| ||| |||||| ||| ||||| |||||||||||||||||||    
T  16471 tttcagaattatacaacccattattagataaagttaatctcacccttaccttaga-ttgattgatcacaaggttctacaagcttt 16388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 3102 - 3238
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| |||| | ||||||| ||||| | |||||||||||||||||    
T  3102 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatactaaagtcaatttcagaattataca 3196  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| ||| ||| ||| ||||||||    
T  3197 acttagaattagagaaagttagtccaacccttaccttagatt 3238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 1187 - 1257
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||    
T  1187 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 2537 - 2611
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| | ||||||    
T  2537 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagatt 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 35472 - 35546
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| || |||| ||| ||||||||    
T  35472 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagatt 35546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 78255 - 78185
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||    
T  78255 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 24201 - 24131
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||    
T  24201 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 169069 - 169008
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| |||||||    
T  169069 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacc 169008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 143593 - 143663
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| || |||| ||| ||||    
T  143593 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 4846 - 4714
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |||| || | | ||||||||||||| | |||||||||||||||||    
T  4846 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataact-acgacctacaacatgctaaactcaatttcagaattataca 4752  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| ||| ||| ||| ||||    
T  4751 acttagaattagagaaagttagtccgacccttacctta 4714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 438 - 574
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||||||    | |  ||||||| || |||| |||| | ||||||||||||| | ||||||||||| |||||    
T  438 actctattaacaaccaattacaacttcaaaaccta----atttccaaattctcataact-acaacctacaacatgctaaactcaatttcagaatgataca 532  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | ||||||||||||| || |||| ||| ||||||||    
T  533 acttagaattagagaaagttagtctcacccttaccttagatt 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 146643 - 146779
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||  |||||||||||||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||||||||||    
T  146643 actctattaacaaccaattataacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattataca 146737  T
Q  154 acctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    || || | |||||| |||||| |||||||  || ||||||||    
T  146738 acttagaattagagtaagttagtcccacccataccttagatt 146779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 828 - 705
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    |||||||||||||  |||||| |||||||||||||    | || ||||||| || |||| |||| | |||||||| |||| | |||||||||||||||||    
T  828 actctattaacaactaattacaacttcaaaaccta----attcccaaattcccataact-acaacctacaacatgttaaactcaatttcagaattataca 734  T
Q  154 acctaaagttagagaaagttaatcccacc 182  Q
    || || | ||||||||||||| |||||||    
T  733 acttagaattagagaaagttagtcccacc 705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 19735 - 19829
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatttggttgattacaaggttctac 216  Q
    ||||| ||||||| | ||||| ||||||||||||| || | ||||||||||| | || |||| ||| |||||| |||||||||| |||||||||||    
T  19735 acaacttgctaaactcaatttgagaattatacaacttagaattagagaaagtcagtctcacccttaccttaga-ttggttgattgcaaggttctac 19829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 29640 - 29569
Alignment:
Q  124 acatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||| | ||||||||||||||||||| || | ||| ||||||||| ||||||| ||| ||||||||    
T  29640 acatgctaaactcaatttcagaattatacaacttagaattatagaaagttagtcccacccttaccttagatt 29569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 21925 - 21793
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcacaaactcacaaacaacaacatgctaaaatgaatttcagaattatacaa 154  Q
    ||||||||||||| ||||||| |||||||||||||    | || ||||||| || |   |||| | ||||||||||||| | |||||||||| |||||||    
T  21925 actctattaacaaccaattacaacttcaaaaccta----attcccaaattcccataaatacaacctacaacatgctaaattcaatttcagaactatacaa 21830  T
Q  155 cctaaagttagagaaagttaatcccacctttatctta 191  Q
    | || | ||||||||| ||| ||||||| ||| ||||    
T  21829 cttagaattagagaaatttagtcccaccattacctta 21793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 1922 - 1856
Alignment:
Q  116 aaacaacaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    ||||||||||||| |||| | |||||||||||||||| || || | ||||||||||||| |||||||    
T  1922 aaacaacaacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccacc 1856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 79031 - 79101
Alignment:
Q  121 acaacatgctaaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacctttatctta 191  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||| || |||| ||| ||||    
T  79031 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 79101  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 49756 - 49812
Alignment:
Q  166 agaaagttaatcccacctttatcttagatttggttgattacaaggttctacaagcttt 223  Q
    |||| |||| ||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  49756 agaaggttagtcccacccttaccttagatt-ggttgattacaaggttctacaagcttt 49812  T

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Target: scaffold0407 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 11406 - 11274
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| |||||||||| ||    | || ||||||| || |||| |||| | ||||||||||||| | |||||||||| ||||||    
T  11406 actctattaacaaccaattacaacttcaaaactta----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaaatataca 11312  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    || || | ||||||||||||| || |||| ||| ||||    
T  11311 acttagaattagagaaagttagtctcacccttacctta 11274  T

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Target: scaffold0203 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 17992 - 17936
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||| || | ||||||||||||| ||||||| ||| ||||||||    
T  17992 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagatt 17936  T

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Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 34259 - 34391
Alignment:
Q  55 actctattaacaatcaattacgacttcaaaacctagctaactctcaaattcaca-aactcacaaacaacaacatgctaaaatgaatttcagaattataca 153  Q
    ||||||||||||| ||||||| ||||||||||||     | || ||||||| || |||| |||| | ||||||||||||| | ||||||||||||| |||    
T  34259 actctattaacaaccaattacaacttcaaaacctg----attcccaaattcccataact-acaacctacaacatgctaaactcaatttcagaattaaaca 34353  T
Q  154 acctaaagttagagaaagttaatcccacctttatctta 191  Q
    |  || | ||||||||||||| ||||||| ||| ||||    
T  34354 aattagaattagagaaagttagtcccacccttacctta 34391  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 5768 - 5716
Alignment:
Q  130 taaaatgaatttcagaattatacaacctaaagttagagaaagttaatcccacc 182  Q
    |||| ||||||||||||||||||||| || | ||||||||||||| |||||||    
T  5768 taaattgaatttcagaattatacaacttagaattagagaaagttagtcccacc 5716  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 5353 - 5304
Alignment:
Q  143 agaattatacaacctaaagttagagaaagttaatcccacctttatcttag 192  Q
    ||||||||||||| |||| ||||||||||||| ||||||| ||| |||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttaccttag 5304  T

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Target: scaffold0802 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 4761 - 4705
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || || | ||||||||||||| ||||||| ||| ||||||||    
T  4761 tttcagaattatactacttagaattagagaaagttagtcccacccttaccttagatt 4705  T

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Target: scaffold0213 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 19207 - 19263
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||| || | ||||||||||||| ||||||| |||  |||||||    
T  19207 tttcagaattatacaacttagaattagagaaagttagtcccacccttacgttagatt 19263  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 67121 - 67177
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    |||||||||||||| || |  | ||||||||||||| ||||||||||| ||||||||    
T  67121 tttcagaattataccacttcgaattagagaaagttagtcccacctttaccttagatt 67177  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 61900 - 61844
Alignment:
Q  139 tttcagaattatacaacctaaagttagagaaagttaatcccacctttatcttagatt 195  Q
    ||||||||||||||||| || | ||||||||||||| || |||| ||| ||||||||    
T  61900 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagatt 61844  T

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