View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12623_low_13 (Length: 255)
Name: NF12623_low_13
Description: NF12623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12623_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 49944923 - 49945157
Alignment:
| Q |
1 |
ttctctccaacaactccaaatgattgttactattgatagtgatagtgttgtaaactttgaaagaagaatgaagcttgattccgaagaaagaggtgttcat |
100 |
Q |
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| T |
49944923 |
ttctctccaacaactccaaatgattgttactattgatagtgatagtgttgtaaactttgaaagaagaatgaagcttgattccgaagaaagaggtgttcat |
49945022 |
T |
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| Q |
101 |
tatcttcttctccttctcagttccctaacgaagtgctactgcatttaggaaactgagaattttagaatccattctgatgtcacttttgagtgtgaaaaat |
200 |
Q |
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| T |
49945023 |
tatcttcttctccttctcagttccctaacgaattgctactgcatttaggaaactgagaattttagaatccattctgatgtcacttttgagtgtgaaaaat |
49945122 |
T |
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| Q |
201 |
gagaacttgtttggtttgaagagattcgaacttga |
235 |
Q |
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||||||||||||| ||||||||||||||||||||| |
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| T |
49945123 |
gagaacttgtttgttttgaagagattcgaacttga |
49945157 |
T |
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