View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12624_high_15 (Length: 279)

Name: NF12624_high_15
Description: NF12624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12624_high_15
NF12624_high_15
[»] chr3 (69 HSPs)
chr3 (1-159)||(35138706-35138864)
chr3 (6-159)||(46860489-46860642)
chr3 (184-264)||(35138597-35138677)
chr3 (6-97)||(20937671-20937762)
chr3 (6-148)||(34491227-34491368)
chr3 (5-148)||(4055775-4055918)
chr3 (10-148)||(7762284-7762422)
chr3 (6-148)||(44700491-44700631)
chr3 (6-103)||(51398829-51398925)
chr3 (6-148)||(32891118-32891260)
chr3 (6-126)||(47304266-47304385)
chr3 (6-148)||(49199480-49199623)
chr3 (1-100)||(8166516-8166615)
chr3 (6-148)||(30236140-30236281)
chr3 (6-148)||(40734513-40734654)
chr3 (6-124)||(760862-760979)
chr3 (5-103)||(7764478-7764575)
chr3 (6-124)||(29682374-29682491)
chr3 (6-124)||(39153397-39153514)
chr3 (6-103)||(4569967-4570063)
chr3 (6-103)||(22835059-22835155)
chr3 (5-148)||(9581296-9581439)
chr3 (6-148)||(29196398-29196540)
chr3 (6-148)||(43401812-43401955)
chr3 (6-148)||(43403755-43403898)
chr3 (1-103)||(1313861-1313964)
chr3 (6-148)||(19683900-19684042)
chr3 (6-148)||(40735398-40735539)
chr3 (6-148)||(46173372-46173513)
chr3 (10-100)||(24635276-24635366)
chr3 (6-103)||(36018867-36018963)
chr3 (10-135)||(37408477-37408602)
chr3 (6-124)||(53921539-53921656)
chr3 (6-103)||(5236513-5236609)
chr3 (6-103)||(32744493-32744588)
chr3 (39-104)||(40519253-40519317)
chr3 (6-148)||(6095611-6095752)
chr3 (1-100)||(26323133-26323232)
chr3 (6-148)||(44331560-44331701)
chr3 (5-80)||(50432733-50432808)
chr3 (26-124)||(29810903-29811000)
chr3 (26-103)||(54593739-54593815)
chr3 (11-103)||(54739010-54739102)
chr3 (1-97)||(39127557-39127653)
chr3 (11-103)||(45095183-45095274)
chr3 (46-148)||(4075482-4075585)
chr3 (6-148)||(23391921-23392062)
chr3 (6-148)||(29813078-29813219)
chr3 (67-148)||(55301983-55302064)
chr3 (10-103)||(5258201-5258293)
chr3 (10-103)||(5260380-5260472)
chr3 (3-135)||(9636150-9636282)
chr3 (6-103)||(31314460-31314556)
chr3 (6-145)||(41819537-41819676)
chr3 (13-100)||(25491027-25491114)
chr3 (26-93)||(31340268-31340334)
chr3 (26-144)||(33191867-33191983)
chr3 (50-148)||(40913352-40913449)
chr3 (26-88)||(5433947-5434009)
chr3 (6-103)||(9666523-9666620)
chr3 (40-133)||(16499078-16499171)
chr3 (40-97)||(2020188-2020245)
chr3 (10-94)||(5373251-5373336)
chr3 (50-148)||(801149-801249)
chr3 (50-100)||(23197999-23198048)
chr3 (50-100)||(23200198-23200247)
chr3 (6-135)||(23410353-23410482)
chr3 (65-103)||(54744306-54744344)
chr3 (50-103)||(7780061-7780113)
[»] chr2 (50 HSPs)
chr2 (26-148)||(24398092-24398215)
chr2 (1-144)||(30218059-30218203)
chr2 (26-148)||(33648206-33648329)
chr2 (12-100)||(42261545-42261633)
chr2 (6-148)||(2334429-2334571)
chr2 (6-103)||(1631789-1631885)
chr2 (28-148)||(17490160-17490279)
chr2 (6-103)||(33162507-33162603)
chr2 (6-103)||(42362367-42362463)
chr2 (9-148)||(723756-723894)
chr2 (6-148)||(17057381-17057522)
chr2 (6-148)||(17085364-17085505)
chr2 (6-148)||(45726944-45727085)
chr2 (26-124)||(36773597-36773694)
chr2 (26-103)||(26353219-26353295)
chr2 (6-103)||(36318066-36318162)
chr2 (11-100)||(41454254-41454343)
chr2 (10-159)||(42019870-42020022)
chr2 (3-103)||(30833357-30833457)
chr2 (40-103)||(7815330-7815392)
chr2 (6-148)||(29867884-29868025)
chr2 (50-148)||(36988087-36988185)
chr2 (1-103)||(5723313-5723414)
chr2 (11-148)||(6595017-6595154)
chr2 (6-124)||(38312255-38312372)
chr2 (6-148)||(42288123-42288263)
chr2 (10-103)||(45099774-45099865)
chr2 (11-103)||(4503190-4503280)
chr2 (6-103)||(11690516-11690612)
chr2 (6-103)||(35446941-35447037)
chr2 (3-103)||(4484387-4484487)
chr2 (6-148)||(14633837-14633979)
chr2 (6-148)||(34139782-34139924)
chr2 (26-100)||(12123644-12123718)
chr2 (48-149)||(28671987-28672089)
chr2 (6-103)||(11151648-11151744)
chr2 (11-100)||(34811281-34811370)
chr2 (6-148)||(11067320-11067461)
chr2 (40-103)||(7451167-7451229)
chr2 (6-65)||(14202499-14202558)
chr2 (50-96)||(7597074-7597120)
chr2 (34-119)||(11049596-11049681)
chr2 (26-103)||(13121804-13121878)
chr2 (5-99)||(32289577-32289671)
chr2 (11-89)||(41446159-41446237)
chr2 (42-103)||(3897041-3897102)
chr2 (11-95)||(36205730-36205812)
chr2 (40-100)||(4561137-4561197)
chr2 (39-100)||(36282975-36283038)
chr2 (52-103)||(19401318-19401369)
[»] chr5 (54 HSPs)
chr5 (1-148)||(316772-316920)
chr5 (1-145)||(10054830-10054974)
chr5 (6-148)||(28278331-28278472)
chr5 (1-100)||(35616179-35616278)
chr5 (6-148)||(40147276-40147417)
chr5 (6-124)||(33831695-33831812)
chr5 (6-124)||(42426271-42426388)
chr5 (6-148)||(213480-213622)
chr5 (6-148)||(16452095-16452236)
chr5 (1-103)||(42309992-42310094)
chr5 (6-148)||(42428442-42428583)
chr5 (11-148)||(13239771-13239908)
chr5 (6-124)||(13488218-13488335)
chr5 (11-148)||(37439161-37439298)
chr5 (26-103)||(13695747-13695824)
chr5 (36-97)||(32609580-32609641)
chr5 (6-103)||(39468606-39468702)
chr5 (6-148)||(533784-533925)
chr5 (6-148)||(538040-538181)
chr5 (5-147)||(33906042-33906185)
chr5 (6-103)||(31182987-31183082)
chr5 (6-103)||(38747020-38747116)
chr5 (6-149)||(28750666-28750808)
chr5 (5-135)||(25412774-25412904)
chr5 (6-148)||(32636839-32636980)
chr5 (34-159)||(9049343-9049467)
chr5 (10-103)||(22097883-22097974)
chr5 (6-103)||(8566003-8566099)
chr5 (11-103)||(3325933-3326025)
chr5 (6-148)||(27637624-27637766)
chr5 (50-148)||(36074054-36074151)
chr5 (13-100)||(32583342-32583429)
chr5 (6-103)||(5058062-5058156)
chr5 (37-99)||(8445761-8445823)
chr5 (5-103)||(26177895-26177993)
chr5 (50-103)||(9789281-9789334)
chr5 (50-103)||(16409533-16409586)
chr5 (50-103)||(18441705-18441758)
chr5 (10-148)||(13343080-13343217)
chr5 (1-97)||(30802839-30802934)
chr5 (27-148)||(30682934-30683056)
chr5 (35-93)||(42926911-42926968)
chr5 (6-83)||(5887492-5887569)
chr5 (11-100)||(10700708-10700796)
chr5 (11-83)||(16641013-16641086)
chr5 (6-58)||(19806398-19806449)
chr5 (11-103)||(30182608-30182699)
chr5 (1-84)||(14689502-14689585)
chr5 (6-100)||(3075718-3075811)
chr5 (66-100)||(5007806-5007840)
chr5 (67-148)||(27015599-27015679)
chr5 (66-100)||(30793211-30793245)
chr5 (30-87)||(8038235-8038292)
chr5 (40-103)||(2149213-2149277)
[»] scaffold0219 (1 HSPs)
scaffold0219 (12-149)||(27452-27591)
[»] chr6 (34 HSPs)
chr6 (6-148)||(5043642-5043784)
chr6 (6-135)||(2972963-2973092)
chr6 (6-122)||(17758038-17758153)
chr6 (5-148)||(26954298-26954440)
chr6 (6-148)||(21588946-21589087)
chr6 (6-148)||(21593679-21593820)
chr6 (6-103)||(9183088-9183184)
chr6 (6-149)||(28137419-28137561)
chr6 (6-148)||(33211197-33211338)
chr6 (6-135)||(26830147-26830276)
chr6 (6-103)||(17763005-17763101)
chr6 (40-148)||(2908507-2908614)
chr6 (6-148)||(3808719-3808862)
chr6 (33-148)||(26800629-26800744)
chr6 (6-146)||(22424839-22424980)
chr6 (9-103)||(603145-603238)
chr6 (11-97)||(186734-186820)
chr6 (11-135)||(5406224-5406348)
chr6 (11-135)||(5410549-5410673)
chr6 (11-103)||(25073588-25073680)
chr6 (11-103)||(31404732-31404823)
chr6 (50-148)||(5413405-5413503)
chr6 (26-103)||(4045458-4045535)
chr6 (10-103)||(30834593-30834685)
chr6 (50-103)||(33160409-33160461)
chr6 (6-103)||(3038960-3039056)
chr6 (11-103)||(2171589-2171679)
chr6 (65-148)||(5409080-5409163)
chr6 (5-100)||(12221163-12221258)
chr6 (50-103)||(412159-412213)
chr6 (42-103)||(32247080-32247142)
chr6 (10-103)||(16452386-16452478)
chr6 (16-72)||(27106178-27106234)
chr6 (16-72)||(27147984-27148040)
[»] chr4 (77 HSPs)
chr4 (6-148)||(12073407-12073549)
chr4 (1-159)||(22882752-22882909)
chr4 (1-159)||(22934416-22934573)
chr4 (12-148)||(12119559-12119696)
chr4 (6-148)||(379395-379537)
chr4 (26-148)||(26699453-26699576)
chr4 (6-103)||(35662456-35662552)
chr4 (13-96)||(32091500-32091583)
chr4 (6-103)||(6655971-6656067)
chr4 (6-103)||(24969127-24969223)
chr4 (12-149)||(34112838-34112974)
chr4 (6-149)||(46703515-46703659)
chr4 (6-148)||(2209728-2209871)
chr4 (6-148)||(9927470-9927611)
chr4 (6-148)||(27416977-27417118)
chr4 (11-98)||(44570427-44570514)
chr4 (6-148)||(46147403-46147544)
chr4 (10-148)||(56178648-56178786)
chr4 (26-124)||(4587994-4588091)
chr4 (6-135)||(8665423-8665552)
chr4 (6-124)||(26364251-26364368)
chr4 (6-99)||(31474165-31474258)
chr4 (13-103)||(33089900-33089990)
chr4 (6-124)||(36994539-36994656)
chr4 (6-103)||(54883035-54883131)
chr4 (8-143)||(33989861-33989997)
chr4 (11-87)||(34788847-34788923)
chr4 (29-148)||(50673859-50673977)
chr4 (6-148)||(26175648-26175789)
chr4 (26-148)||(50262712-50262834)
chr4 (6-159)||(5349925-5350076)
chr4 (6-100)||(54199966-54200059)
chr4 (1-148)||(38811202-38811347)
chr4 (6-103)||(40632460-40632556)
chr4 (6-148)||(47038423-47038563)
chr4 (34-148)||(48893650-48893763)
chr4 (6-124)||(5429694-5429811)
chr4 (6-135)||(8648154-8648283)
chr4 (35-148)||(29254538-29254650)
chr4 (6-124)||(34570450-34570567)
chr4 (26-124)||(37740660-37740757)
chr4 (26-103)||(3913483-3913559)
chr4 (11-135)||(48143063-48143187)
chr4 (40-148)||(21703847-21703955)
chr4 (5-145)||(35369461-35369595)
chr4 (6-148)||(41964430-41964572)
chr4 (28-103)||(6677506-6677581)
chr4 (6-148)||(12743937-12744078)
chr4 (6-148)||(12745326-12745467)
chr4 (1-100)||(16422666-16422765)
chr4 (6-148)||(36463401-36463542)
chr4 (6-148)||(41639441-41639582)
chr4 (26-97)||(48142440-48142511)
chr4 (6-124)||(52467390-52467507)
chr4 (6-103)||(12745493-12745589)
chr4 (50-102)||(5370141-5370192)
chr4 (11-103)||(12744104-12744195)
chr4 (5-148)||(29999817-29999961)
chr4 (10-135)||(5207866-5207992)
chr4 (26-148)||(6542191-6542312)
chr4 (6-97)||(21688264-21688354)
chr4 (26-140)||(37754979-37755094)
chr4 (28-103)||(53345254-53345329)
chr4 (6-103)||(45687239-45687336)
chr4 (6-103)||(5871835-5871931)
chr4 (50-103)||(13992350-13992401)
chr4 (12-102)||(22628950-22629042)
chr4 (6-103)||(52095419-52095515)
chr4 (6-82)||(55085442-55085518)
chr4 (6-148)||(12739562-12739703)
chr4 (40-83)||(40975085-40975128)
chr4 (6-99)||(1122876-1122969)
chr4 (6-124)||(12747792-12747909)
chr4 (14-100)||(6199932-6200020)
chr4 (190-235)||(33090079-33090124)
chr4 (11-148)||(37229733-37229871)
chr4 (13-77)||(51904491-51904554)
[»] chr1 (70 HSPs)
chr1 (6-148)||(47255351-47255493)
chr1 (11-145)||(22079336-22079471)
chr1 (1-100)||(25652096-25652195)
chr1 (6-148)||(42297986-42298128)
chr1 (26-148)||(6808487-6808610)
chr1 (6-148)||(8550798-8550940)
chr1 (6-148)||(49918365-49918506)
chr1 (11-99)||(4535541-4535629)
chr1 (6-103)||(10925238-10925337)
chr1 (5-100)||(16914234-16914330)
chr1 (6-148)||(3156880-3157021)
chr1 (6-148)||(13547101-13547242)
chr1 (6-148)||(28220238-28220379)
chr1 (6-136)||(41360929-41361059)
chr1 (28-118)||(2263016-2263106)
chr1 (41-103)||(32471510-32471572)
chr1 (6-124)||(50169246-50169363)
chr1 (6-103)||(196965-197061)
chr1 (6-103)||(19754510-19754606)
chr1 (6-135)||(23555290-23555418)
chr1 (6-103)||(31659253-31659349)
chr1 (6-103)||(31925764-31925860)
chr1 (6-148)||(37168312-37168454)
chr1 (6-148)||(47115186-47115329)
chr1 (6-148)||(4552649-4552790)
chr1 (6-148)||(11348713-11348854)
chr1 (6-148)||(28223433-28223574)
chr1 (6-148)||(29136262-29136404)
chr1 (6-124)||(44455175-44455292)
chr1 (6-103)||(45644411-45644508)
chr1 (6-135)||(46064933-46065062)
chr1 (6-103)||(193626-193722)
chr1 (6-103)||(1833537-1833633)
chr1 (40-100)||(9109479-9109539)
chr1 (1-136)||(13137999-13138133)
chr1 (8-100)||(15820324-15820415)
chr1 (6-148)||(34603591-34603733)
chr1 (6-148)||(37033083-37033226)
chr1 (6-148)||(834179-834320)
chr1 (6-100)||(7482290-7482384)
chr1 (6-148)||(13549012-13549153)
chr1 (6-148)||(28265566-28265707)
chr1 (26-103)||(928033-928109)
chr1 (26-103)||(3189365-3189441)
chr1 (26-103)||(3198182-3198258)
chr1 (26-103)||(3207021-3207097)
chr1 (6-103)||(3847178-3847274)
chr1 (6-103)||(19752701-19752797)
chr1 (5-97)||(12318585-12318677)
chr1 (5-100)||(1050503-1050598)
chr1 (26-148)||(44650174-44650296)
chr1 (10-99)||(3460714-3460804)
chr1 (5-142)||(13938151-13938288)
chr1 (10-103)||(13316409-13316501)
chr1 (34-103)||(16455664-16455732)
chr1 (10-103)||(20762691-20762783)
chr1 (6-124)||(37503593-37503707)
chr1 (12-124)||(50167211-50167322)
chr1 (10-97)||(41135839-41135926)
chr1 (40-133)||(13659362-13659455)
chr1 (6-72)||(36683705-36683771)
chr1 (68-148)||(28242382-28242461)
chr1 (6-103)||(30476503-30476599)
chr1 (34-103)||(37282748-37282817)
chr1 (50-148)||(9987260-9987358)
chr1 (6-100)||(37559928-37560022)
chr1 (41-99)||(5459956-5460013)
chr1 (202-234)||(16216419-16216451)
chr1 (12-103)||(30670114-30670205)
chr1 (31-96)||(38746780-38746847)
[»] chr8 (53 HSPs)
chr8 (6-148)||(3303682-3303823)
chr8 (6-103)||(1292520-1292616)
chr8 (40-159)||(11712000-11712120)
chr8 (1-141)||(32902191-32902332)
chr8 (26-157)||(7597649-7597781)
chr8 (6-148)||(18655415-18655556)
chr8 (6-148)||(27811293-27811434)
chr8 (6-124)||(30143355-30143472)
chr8 (6-124)||(44353808-44353925)
chr8 (6-103)||(11384000-11384096)
chr8 (6-103)||(42435048-42435144)
chr8 (6-122)||(4283539-4283654)
chr8 (6-136)||(19491722-19491852)
chr8 (6-135)||(1345395-1345524)
chr8 (6-103)||(40328794-40328891)
chr8 (6-148)||(15212801-15212942)
chr8 (6-148)||(40221760-40221901)
chr8 (6-148)||(40321095-40321236)
chr8 (6-159)||(4162512-4162663)
chr8 (6-124)||(18141836-18141952)
chr8 (11-148)||(42498214-42498351)
chr8 (6-103)||(4731673-4731769)
chr8 (6-103)||(43036438-43036534)
chr8 (11-103)||(34256564-34256655)
chr8 (6-148)||(33352165-33352306)
chr8 (26-100)||(8965751-8965824)
chr8 (6-68)||(10929814-10929876)
chr8 (10-124)||(12702670-12702783)
chr8 (6-103)||(30291621-30291718)
chr8 (5-103)||(34254388-34254485)
chr8 (6-103)||(9765760-9765856)
chr8 (10-103)||(17982672-17982764)
chr8 (26-101)||(10240189-10240264)
chr8 (6-124)||(5689286-5689403)
chr8 (6-148)||(41366627-41366767)
chr8 (11-103)||(1746276-1746366)
chr8 (6-103)||(6598987-6599083)
chr8 (6-103)||(6674440-6674536)
chr8 (26-148)||(29796331-29796455)
chr8 (11-103)||(31218277-31218368)
chr8 (6-148)||(10930211-10930352)
chr8 (26-96)||(3231859-3231929)
chr8 (26-100)||(18106139-18106211)
chr8 (10-103)||(19945416-19945509)
chr8 (6-80)||(41364926-41365000)
chr8 (40-148)||(10015130-10015235)
chr8 (10-103)||(44303874-44303966)
chr8 (51-135)||(3073898-3073981)
chr8 (39-99)||(8153806-8153865)
chr8 (50-103)||(2627793-2627847)
chr8 (83-148)||(4743226-4743291)
chr8 (50-100)||(41267028-41267078)
chr8 (1-100)||(11137035-11137137)
[»] chr7 (60 HSPs)
chr7 (6-103)||(2361029-2361125)
chr7 (6-103)||(29608752-29608848)
chr7 (26-148)||(22328401-22328524)
chr7 (26-101)||(36574574-36574649)
chr7 (12-100)||(5116625-5116713)
chr7 (6-148)||(8359327-8359470)
chr7 (6-148)||(22269988-22270129)
chr7 (6-125)||(26417331-26417449)
chr7 (6-148)||(27347832-27347973)
chr7 (6-148)||(31732981-31733122)
chr7 (6-125)||(47673978-47674096)
chr7 (6-124)||(496019-496136)
chr7 (6-103)||(23565118-23565215)
chr7 (6-124)||(48491594-48491711)
chr7 (6-103)||(4510605-4510701)
chr7 (6-103)||(4512447-4512543)
chr7 (6-103)||(6431986-6432082)
chr7 (35-100)||(27073860-27073925)
chr7 (35-100)||(27204388-27204453)
chr7 (6-103)||(48599391-48599487)
chr7 (6-102)||(47676194-47676289)
chr7 (6-148)||(30024744-30024885)
chr7 (6-148)||(34310727-34310869)
chr7 (11-148)||(23555060-23555197)
chr7 (6-107)||(31518810-31518910)
chr7 (11-100)||(43363531-43363622)
chr7 (6-148)||(2390297-2390438)
chr7 (50-148)||(3904628-3904726)
chr7 (34-148)||(32358066-32358179)
chr7 (6-148)||(38671234-38671375)
chr7 (6-148)||(41649023-41649163)
chr7 (6-124)||(1113672-1113789)
chr7 (6-135)||(3259010-3259139)
chr7 (6-124)||(4586176-4586293)
chr7 (6-124)||(8153357-8153474)
chr7 (13-103)||(19502200-19502289)
chr7 (26-103)||(2759254-2759330)
chr7 (26-103)||(4253585-4253662)
chr7 (6-103)||(4508763-4508859)
chr7 (6-103)||(18126659-18126755)
chr7 (6-103)||(31105450-31105546)
chr7 (10-103)||(35853933-35854025)
chr7 (31-99)||(6360013-6360080)
chr7 (10-126)||(14069867-14069982)
chr7 (10-124)||(14379897-14380010)
chr7 (11-73)||(26639340-26639402)
chr7 (6-103)||(36146465-36146561)
chr7 (9-103)||(43864262-43864355)
chr7 (6-103)||(25615868-25615964)
chr7 (50-103)||(39731427-39731480)
chr7 (6-159)||(31518918-31519070)
chr7 (6-77)||(12097941-12098012)
chr7 (26-148)||(18396353-18396475)
chr7 (6-148)||(41317446-41317587)
chr7 (50-103)||(4178833-4178884)
chr7 (67-126)||(24525536-24525594)
chr7 (50-148)||(29991112-29991210)
chr7 (6-148)||(48489446-48489587)
chr7 (10-103)||(25767017-25767110)
chr7 (190-235)||(1360097-1360142)
[»] scaffold0002 (2 HSPs)
scaffold0002 (12-100)||(490380-490468)
scaffold0002 (10-103)||(434552-434644)
[»] scaffold0466 (1 HSPs)
scaffold0466 (6-103)||(7342-7438)
[»] scaffold0053 (1 HSPs)
scaffold0053 (26-100)||(25088-25162)
[»] scaffold0176 (1 HSPs)
scaffold0176 (6-103)||(18061-18156)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-100)||(80343-80436)
[»] scaffold0016 (1 HSPs)
scaffold0016 (10-103)||(114621-114713)
[»] scaffold0286 (1 HSPs)
scaffold0286 (11-103)||(11577-11668)
[»] scaffold0197 (1 HSPs)
scaffold0197 (5-159)||(1397-1549)
[»] scaffold0066 (1 HSPs)
scaffold0066 (14-148)||(20427-20560)
[»] scaffold1519 (1 HSPs)
scaffold1519 (10-103)||(935-1026)
[»] scaffold0006 (1 HSPs)
scaffold0006 (40-133)||(149123-149216)
[»] scaffold0491 (2 HSPs)
scaffold0491 (3-103)||(11218-11318)
scaffold0491 (50-103)||(8792-8845)
[»] scaffold0236 (1 HSPs)
scaffold0236 (66-148)||(10564-10645)


Alignment Details
Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 35138864 - 35138706
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138864 ttgagaaatgggtagaaattatgtttgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 35138765  T
Q  101 gatagaatagaacaatctccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
    ||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  35138764 gatggaagagaacaatctcccccaaaagtaggtcattgttgaaccgaatcggataaaca 35138706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 46860489 - 46860642
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| || |||||||||||||||||| |    
T  46860489 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aataactcattgatagtggattg 46860587  T
Q  106 aatagaacaatc-tccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
     | ||| ||||| | || ||| ||||||||||||||||||||||| |||| ||||    
T  46860588 gagagatcaatctttcctccagagtaggtcattgttggaccgaattggatgaaca 46860642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 35138677 - 35138597
Alignment:
Q  184 ctaaattctttatctggtttattctttagttcggttgtggttttgctttacatctaattgctacattggatctaaatatgt 264  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  35138677 ctaaattctttatctggtttattctttggttcgattgtggttttgttttacacctaattgctagattggatctaaatatgt 35138597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 20937671 - 20937762
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    |||| |||||||||||||| |||| |||| ||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  20937671 aaataggtagaaattatgtttgtttttggagagcttgttgaagttaatttcttgtaacccttttgtatctctttgaaaagaactcattgata 20937762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 34491227 - 34491368
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  34491227 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 34491325  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  34491326 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 34491368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 4055918 - 4055775
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaac-tcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||| || ||||||||| ||  ||||  |||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||    
T  4055918 gaaatgggtagaaattaggt-tgttcttggagaacttgtaaaagttaatttcttgtaacctcttttgtatctctttgtaagaaactcattgatagtggat 4055820  T
Q  104 agaatagaacaatctccccccaaagtaggtcattgttggaccgaa 148  Q
     ||| ||| |  ||||||||  | ||||||||||||||| |||||    
T  4055819 tgaagagatctctctcccccagatgtaggtcattgttgggccgaa 4055775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 7762284 - 7762422
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | | |    
T  7762284 gggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggaga 7762382  T
Q  110 gaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    || ||||||| || ||| |||||||||   ||||||||||    
T  7762383 gatcaatctctcctccagagtaggtcaagtttggaccgaa 7762422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 44700631 - 44700491
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||||||||||||| |||||||||| |||   ||||||||||||||| |||||||| |||||||||||| |    
T  44700631 aaatgggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactctttgatagtggattg 44700533  T
Q  106 aatagaacaatctccccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| ||||| | |||||||  |||||||||||    
T  44700532 gagagatcaatctctccccacattaggtca-agttggaccgaa 44700491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 51398829 - 51398925
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  51398829 aaatgggtagaaattagggttgttcttagtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 51398925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 32891118 - 32891260
Alignment:
Q  6 aaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| || | |||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||     
T  32891118 aaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcgttgatagtggatt 32891216  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | |||  |||||| |||||  ||||||||| ||||||||||||    
T  32891217 ggagagataaatctctcccccggagtaggtca-tgttggaccgaa 32891260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 47304266 - 47304385
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||  ||||||| ||||| |||||||||||||| ||||| ||| | | |||||||||| || ||||||||||||||||||||| |    
T  47304266 aaatgggtagaaattatggttgttctttgtgagcttgttgaagttaatatcttgtaacccatctgtatctcttcgt-aagaactcattgatagtggattg 47304364  T
Q  106 aatagaacaatctccccccaa 126  Q
     | ||| ||||||| ||||||    
T  47304365 gagagatcaatctctccccaa 47304385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 49199623 - 49199480
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | |||||||||||||||| |||||||||||||||||||||     
T  49199623 aaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggatt 49199525  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | |||  |||||| || ||| | |||||||| |||||||||||    
T  49199524 ggagagattaatctctcctccagactaggtcatggttggaccgaa 49199480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8166615 - 8166516
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| ||||| |||||||||| || ||||||||| |||||||||||||||||| ||||  |||  ||||||||||||||||||||||||  |||||||||    
T  8166615 ttgataaatgagtagaaattaggtttgttcttggagagtttgttgaagttaatatcttataacctttttgtatctctttgtaaagaacttgttgatagtg 8166516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 30236140 - 30236281
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| |||   ||||||||||||||| ||||||||||||||||||||| |    
T  30236140 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgatagtggattg 30236238  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  30236239 gagagatcaatctctcccccagattaggtca-agttggaccgaa 30236281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 40734513 - 40734654
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||  |||||||||| ||| | |||||||| |||||| ||||||||||||||||||||| |    
T  40734513 aaatgggtagaaattagggttgttctttgtgagcttgttgaacctaatttcttgtaacacatttgtatccctttgt-aagaactcattgatagtggattg 40734611  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||||| |||||||  |||||||||||    
T  40734612 gagagatcaatctctcccccaaattaggtca-agttggaccgaa 40734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 760862 - 760979
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||| ||||||||||||||||||||| |    
T  760862 aaatgggtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattg 760960  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  760961 gagagatcaatctctcccc 760979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 7764478 - 7764575
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| |||||||||||| |  ||||||| ||||  ||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  7764478 gaaaagggtagaaattagggttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggat 7764575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 29682374 - 29682491
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||  || | |||||||| |||||| ||||||||||||||||||||| |    
T  29682374 aaatgggtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatccctttgt-aagaactcattgatagtggattg 29682472  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  29682473 gagagatcaatctctcccc 29682491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 39153514 - 39153397
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||| | ||||| ||||| ||| |||||||||| ||||| |||||||| |||| | ||||||||||||||||||||| |    
T  39153514 aaatgggtagaaattaggtttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttat-aagaactcattgatagtggattg 39153416  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||||||||||| ||||    
T  39153415 gagagaacaatctctcccc 39153397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 4569967 - 4570063
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||| | ||||| || |||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  4569967 aaatgggtagaaattagggttgttcattgtgagcttattgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 4570063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 22835155 - 22835059
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||| |||||||||||||||||||||    
T  22835155 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggat 22835059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 9581296 - 9581439
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||  ||| | |||||||| |||||| |||||||||||||||||||||     
T  9581296 gaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccctttgt-aagaactcattgatagtggatt 9581394  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| || ||| |||||||||   ||||||||||    
T  9581395 ggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 9581439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 29196540 - 29196398
Alignment:
Q  6 aaatgggtagaaattatg-tgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| | | ||||||| ||||| ||||  ||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||     
T  29196540 aaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctctttgt-aagaactcattgatagtggatt 29196442  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| |||||||| |||||||  |||||||||||    
T  29196441 ggagagatcaatctctcccccaaattaggtca-agttggaccgaa 29196398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 43401955 - 43401812
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | |||| ||||||||||| |||||||||||||||||||||     
T  43401955 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacgcattttttatctctttgt-aagaactcattgatagtggatt 43401857  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | | |  |||||| || ||| |||||||||| |||||||||||    
T  43401856 ggagaaattaatctctcctccagagtaggtcatggttggaccgaa 43401812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 43403898 - 43403755
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| | |||||||| ||||| | || ||||||||||| |||||||||||||||||||||     
T  43403898 aaatgggtagaaattaggcttgttctttgtgagcttgttgaagctcatttcttgtaactcatgttttatctctttgt-aagaactcattgatagtggatt 43403800  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | |||  |||||| || ||| |||||||||| |||||||||||    
T  43403799 ggagagattaatctctcctccagagtaggtcatggttggaccgaa 43403755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1313964 - 1313861
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||||| ||||| ||||||||| | |||||||| ||| ||||| ||| |||||||||||||  ||||||||| |||||| |||||||||||||||| |    
T  1313964 ttgagaaaagggtaaaaattatgttttgttcttggagagcttgttaaagctaatttcttgcaagccttttgtatatctttgaaaagaactcattgatatt 1313865  T
Q  100 ggat 103  Q
    ||||    
T  1313864 ggat 1313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 19684042 - 19683900
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |    
T  19684042 aaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattg 19683944  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||   ||||||||||    
T  19683943 gagagatcaatctctcctccatagtaggtcaagtttggaccgaa 19683900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 40735398 - 40735539
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||| ||| |||   ||||||||||||||| ||||||||||||||||||||| |    
T  40735398 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttattgtaaccagtttgtatctctttgt-aagaactcattgatagtggattg 40735496  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  40735497 gagagatcaatctctcccccagattaggtca-agttggaccgaa 40735539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 46173372 - 46173513
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||| ||||||||||||||| |    
T  46173372 aaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaattcattgatagtggattg 46173470  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  46173471 gagagatcaatctctcccccagattaggtca-agttggaccgaa 46173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 24635276 - 24635366
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||| || ||||||||| ||||||||||||| |||||| ||| |||| |||||||||||||| |||  || ||||||||||||    
T  24635276 gggtagaaattaagtttgttcttggagagtttgttgaagctaattttttgtaactattttgtatctctttataatcaattcattgatagtg 24635366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 36018867 - 36018963
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||| ||||||| |  ||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||    
T  36018867 aaatgggttgaaattagggttgttctttgtgagcttgttgaagttaatttcttgtaactcattttgtatctctttgt-aagaactcatt-atagtggat 36018963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 37408477 - 37408602
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| |    
T  37408477 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattgaaga 37408575  T
Q  110 gaacaatctc-cccccaaagtaggtca 135  Q
    || ||||||| || ||| |||||||||    
T  37408576 gatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 53921656 - 53921539
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || |||| || ||||| ||||| ||| |||||||||| ||||| ||||||||  ||||| ||||||||||||||||||||| |    
T  53921656 aaatgggtagaaattaggtttgttgtttgtgagcttgttaaagctaatttcttgtaactcatttgtatcattttgt-aagaactcattgatagtggattg 53921558  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  53921557 gagagatcaatctctcccc 53921539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 5236609 - 5236513
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||| |||||    
T  5236609 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgataatggat 5236513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 32744588 - 32744493
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||||| |||||||| |||||||| |||||| ||||||||||||    
T  32744588 aaatgggtagaaatta-gtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcactttgtaa-gaactctttgatagtggat 32744493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 40519317 - 40519253
Alignment:
Q  39 tttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| ||||    
T  40519317 tttgttgaagttaatttcttgtaa-tattttgtatctctttgtaaagaactcattgatagtagata 40519253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 6095752 - 6095611
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| |  ||||||| || |  || ||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  6095752 aaatgagtagaaattagggttgttctttgtaaacttcttgaagttaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 6095654  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  6095653 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 6095611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26323232 - 26323133
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||| ||||| |||||| || |||| |||  ||||||||||||| |||||||||| |||  |||||||| |||| ||||| |||||||||||||||    
T  26323232 ttgagaaaagggtaaaaattaggtttgtttttgaagagtttgttgaagctaatttcttgtaacctttttgtatatcttggtaaaaaactcattgatagtg 26323133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 44331560 - 44331701
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||  | ||||||||||||||| ||||||| ||||||||||||| |    
T  44331560 aaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctctttgt-aagaacttattgatagtggattg 44331658  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  44331659 gagagatcaatctctcccccagattaggtca-agttggaccgaa 44331701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 50432808 - 50432733
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttg 80  Q
    |||| |||||||||||| || || |||||| |||  |||||||||||||||||||||| |||||||||||||||||    
T  50432808 gaaaagggtagaaattaggtctgctcttggagagcgtgttgaagttaatttcttgcaaatcttttgtatctctttg 50432733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 29810903 - 29811000
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccccc 124  Q
    ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||    
T  29810903 tgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcccc 29811000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 54593739 - 54593815
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||| ||||||||| |||||| ||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  54593739 tgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctctttgt-aagaactcattgatagtggat 54593815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 54739102 - 54739010
Alignment:
Q  11 ggtagaaatta-tgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| ||| ||||||| ||||| ||||||||  |||||| | | ||||||||| ||||||| |||||||||||||||||||||||||    
T  54739102 ggtagaaattagtgtttgttctttgtgagcttgttgaaactaatttat-gtaactcttttatatctctctgtaaagaactcattgatagtggat 54739010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39127557 - 39127653
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    |||||||||  ||| ||||||||| ||||||||||||| ||||||||| |||||||||  |  | |||||||||| || ||||| ||||||||||||    
T  39127557 ttgagaaataagtataaattatgtttgttcttggtgagcttgttgaagctaatttcttatagtttttttgtatcttttcgtaaataactcattgata 39127653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 45095183 - 45095274
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  45095183 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggat 45095274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 4075585 - 4075482
Alignment:
Q  46 aagttaatttcttgcaac-tcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctccccccaaagtaggtcattgttggac 144  Q
    |||||||||||||| ||| ||||||||||| ||||||||  ||||| |||||||||||| | | ||| || ||||||||  | ||||||||||||||| |    
T  4075585 aagttaatttcttgtaacctcttttgtatcactttgtaagaaactctttgatagtggattggagagatcactctcccccagatgtaggtcattgttgggc 4075486  T
Q  145 cgaa 148  Q
    ||||    
T  4075485 cgaa 4075482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 23392062 - 23391921
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| ||||| || |||||| |||||||||||| |    
T  23392062 aaatgagtagaaattaagtttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcactttgcaa-gaactctttgatagtggattg 23391964  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | |||  |||||| |||||||| |||||||  |||||||||||    
T  23391963 tagagataaatctctcccccaaattaggtca-agttggaccgaa 23391921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 29813078 - 29813219
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | |||| |||||||||| ||||||||||| ||||||||| |    
T  29813078 aaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctctttgt-aagaactcatttatagtggattg 29813176  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | | ||||| ||||||||||||    
T  29813177 gagagatcaatctctcccccagatttggtca-tgttggaccgaa 29813219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 55302064 - 55301983
Alignment:
Q  67 tttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccc-ccaaagtaggtcattgttggaccgaa 148  Q
    ||||||||||||||||| ||| ||||||||||||||| | | ||| ||||||| || ||| ||||||||||||||||||||||    
T  55302064 tttgtatctctttgtaa-gaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaa 55301983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 5258293 - 5258201
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  5258293 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg-gaagaactcattgatagtggat 5258201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 5260472 - 5260380
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  5260472 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg-gaagaactcattgatagtggat 5260380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 9636282 - 9636150
Alignment:
Q  3 gagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgga 102  Q
    |||||| |||||||||||| |  ||||||| ||||  ||||  ||  |||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||    
T  9636282 gagaaaagggtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccttttgtatctttttgt-aagaactcattgatagtgga 9636184  T
Q  103 tagaatagaacaatctc-cccccaaagtaggtca 135  Q
    | | | ||  ||||||| || |||||||||||||    
T  9636183 ttggagagttcaatctctcctccaaagtaggtca 9636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 31314460 - 31314556
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||| | ||||  ||||||||| |||||||||| ||| | ||||||||| ||||| |||||||| ||||||||||||    
T  31314460 aaatgggtagaaattagggttgttcattgtgatcttgttgaagctaatttcttgtaacccatttgtatctttttgt-aagaactctttgatagtggat 31314556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 41819676 - 41819537
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  |||| || ||||| ||||  ||| |||||||||| ||| | |||||||||||||||||| ||||||||| |||||||||     
T  41819676 aaatgggtagaaattagggttgttttttgtgagcttgtctaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcatt-atagtggatt 41819579  T
Q  105 gaatagaacaatctcccc-ccaaagtaggtcattgttggacc 145  Q
    | | | | ||||||| || ||| |||||||||||||||||||    
T  41819578 ggagacatcaatctctcctccagagtaggtcattgttggacc 41819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 25491114 - 25491027
Alignment:
Q  13 tagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||| || ||||||| | ||| ||||||||| | |||||||  |   ||||||||||||||||||||||| ||||||||||||    
T  25491114 tagaaattaggtttgttctttgagagcttgttgaagctgatttcttatactccttttgtatctctttgtaaagaaatcattgatagtg 25491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 31340334 - 31340268
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcatt 93  Q
    ||||||| ||||| ||||||||| ||||||| || ||||| ||||||||||||||| |||||||||||    
T  31340334 tgttctttgtgagcttgttgaagctaatttcatgtaactcatttgtatctctttgt-aagaactcatt 31340268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 33191867 - 33191983
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccccca 125  Q
    ||||||| | ||| ||||||||| ||| |||||| |||  ||||  || |||||||||||||||||||||||||||||   | ||| ||||||| | |||    
T  33191867 tgttcttagagagcttgttgaagctaagttcttgtaaccatttt--atgtctttgtaaagaactcattgatagtggattagagagatcaatctctctcca 33191964  T
Q  126 aagtaggtcattgttggac 144  Q
     || |||||||||||||||    
T  33191965 gaggaggtcattgttggac 33191983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 40913352 - 40913449
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||| ||||| ||||||||||||||| |||||||||| |||||||||| | | ||| ||||||| |||||| | |||||||  |||||||||||    
T  40913352 taatttcttgtaactcatttgtatctctttgt-aagaactcatcgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaa 40913449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 5434009 - 5433947
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaac 88  Q
    ||||||| ||||| ||||| ||| |||||||||| ||| ||||| ||||||||||||||||||    
T  5434009 tgttctttgtgagcttgttaaagctaatttcttgtaacccttttatatctctttgtaaagaac 5433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 9666620 - 9666523
Alignment:
Q  6 aaatgggtagaaatta-tgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||   | ||||||| ||||| ||||||||| |||||||||| ||||| ||| || |||||||| ||||| || ||||||||||||    
T  9666620 aaatgggtagaaattagattttgttctttgtgagcttgttgaagctaatttcttgtaactcatttatacctctttgt-aagaattctttgatagtggat 9666523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 16499078 - 16499171
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggt 133  Q
    ||||||||| ||||||||||  || | ||| ||||||||||||| ||||||||||||||||||| | | ||| ||||||| |||||| |||||||    
T  16499078 ttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggt 16499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 2020188 - 2020245
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    ||||||||| |||||||||  |||  |||||||| |||||||||||||||||||||||    
T  2020188 ttgttgaagctaatttcttataaccgttttgtatttctttgtaaagaactcattgata 2020245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 5373251 - 5373336
Alignment:
Q  10 gggtagaaattatg-tgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattg 94  Q
    |||||||||||| | | |||||||  |||| ||||||||| |||||| ||| ||| ||||| ||||||||||||| ||||||||||    
T  5373251 gggtagaaattaggctttgttctttttgagcttgttgaagctaatttattgtaacccttttatatctctttgtaaggaactcattg 5373336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 801149 - 801249
Alignment:
Q  50 taatttcttgcaactctttt-gtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccga 147  Q
    |||||||||| ||||||||| ||||||||||   ||||||||||||||||||||| | | || |||||||| || ||| |||||||||   |||||||||    
T  801149 taatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccga 801248  T
Q  148 a 148  Q
    |    
T  801249 a 801249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 23198048 - 23197999
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  23198048 taatttcttgtaacccttttgtatctttttgt-aagaactcattgatagtg 23197999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 23200247 - 23200198
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  23200247 taatttcttgtaacccttttgtatctttttgt-aagaactcattgatagtg 23200198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 23410482 - 23410353
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||| | ||||| ||||| ||||| ||| ||||||| |  ||| | |||||||| |||||| |||||||| | |||| ||||| |    
T  23410482 aaatgggtagaaattatgtttattctttgtgagcttgtttaagctaatttcgtataacccatttgtatcactttgt-aagaactcttagataatggattg 23410384  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
     | |||  |||||| |||||||| |||||||    
T  23410383 gagagataaatctctcccccaaattaggtca 23410353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 54744344 - 54744306
Alignment:
Q  65 cttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  54744344 cttttgtatctctttgtaaagaacttactgatagtggat 54744306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 7780113 - 7780061
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| ||| |||||||||||||||   |||||||||||||||||||||    
T  7780113 taatttcttgtaac-cttttgtatctcttttgtaagaactcattgatagtggat 7780061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 8e-33; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 24398092 - 24398215
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| ||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| | | ||| ||||||| |||||    
T  24398092 tgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctccccc 24398191  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | ||||||||||||||||||||||    
T  24398192 atagtaggtcattgttggaccgaa 24398215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30218203 - 30218059
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||||||||||| ||| || ||||||||| ||| || |||||| |||||||||| |||  ||||||||||||||||||| || ||||||||||||    
T  30218203 ttgagaaatgggtagaagttaggtttgttcttggagagcttattgaagctaatttcttgtaaccattttgtatctctttgtaaataattcattgatagtg 30218104  T
Q  101 gatagaatagaacaatctc-cccccaaagtaggtcattgttggac 144  Q
    | | ||| ||| ||||| | |||||| |||| |||||||||||||    
T  30218103 ggttgaaaagatcaatcactcccccagagtaagtcattgttggac 30218059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 33648206 - 33648329
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| ||||| ||||||||| ||||||| || ||| ||||||||| |||||||||||||||||||||||| |||| | | ||| ||||||| || ||    
T  33648206 tgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctcc 33648305  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | ||||||||||||||||||||||    
T  33648306 agagtaggtcattgttggaccgaa 33648329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 42261633 - 42261545
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| || ||||||||| ||| ||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  42261633 gtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtg 42261545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 2334571 - 2334429
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||| | |  ||||||| ||||  ||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |    
T  2334571 aaatgggtagaaataagggttgttctttgtgaacttgttgaagctaatttctagtaactcttttgtatctctttgt-aagaactcattgatagtggattg 2334473  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||   ||||||||||    
T  2334472 gagagatcaatctctcctccagagtaggtcaagtttggaccgaa 2334429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 1631885 - 1631789
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||| ||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  1631885 aaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 1631789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 17490279 - 17490160
Alignment:
Q  28 ttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaa 126  Q
    ||||| ||||| ||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||| | | ||| ||||||| |||| |     
T  17490279 ttctttgtgagcttgttgaagctaatttcttgtaactcttttgtaactctttgt-aagaactcattgatagtggattgtagagatcaatctctcccctag 17490181  T
Q  127 agtaggtcattgttggaccgaa 148  Q
    ||||||||| | ||||||||||    
T  17490180 agtaggtcaat-ttggaccgaa 17490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 33162603 - 33162507
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||| ||| |||||||||||||||||||||    
T  33162603 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctctgt-aagaactcattgatagtggat 33162507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 42362367 - 42362463
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||| |||||||||||||||||||||    
T  42362367 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggat 42362463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 723894 - 723756
Alignment:
Q  9 tgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaat 108  Q
    ||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||| ||||||||||||||||||||| | |     
T  723894 tgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattggag 723796  T
Q  109 agaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||| ||||||| |||||| | |||||||  |||||||||||    
T  723795 agatcaatctctcccccagattaggtca-agttggaccgaa 723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 17057522 - 17057381
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| |  || ||||||||| |||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  17057522 aaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 17057424  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  17057423 gagagatcaatctctcccccagactaggtca-agttggaccgaa 17057381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 17085505 - 17085364
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| |  || ||||||||| |||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  17085505 aaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 17085407  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  17085406 gagagatcaatctctcccccagactaggtca-agttggaccgaa 17085364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 45726944 - 45727085
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||    ||||||| ||||| ||||||||| |||||||||| |||   ||||||||||||||| ||||||||||||||||||||| |    
T  45726944 aaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgatagtggattg 45727042  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  45727043 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 45727085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 36773597 - 36773694
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccccc 124  Q
    ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| | | ||| ||||||| ||||    
T  36773597 tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactctttgatagtggattggagagatcaatctctcccc 36773694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 26353219 - 26353295
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||||||||||| ||||| ||| |||||||||||||||||    
T  26353219 tgttctttgtgagtttgttgaagctaatttcttgtaacacttttgtatctttttgt-aagtactcattgatagtggat 26353295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 36318162 - 36318066
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||  |||||| ||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  36318162 aaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctctttgt-aagaactcattgatagtggat 36318066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 41454254 - 41454343
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||  | |||| || | ||| ||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  41454254 ggtagaaattagatttgttttttgagagcttgttgaagctaatttctagcaactcttttgtatatatttgtaaagaactcattgatagtg 41454343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 42020022 - 42019870
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgt--aaagaactcattgatagtggatagaa 107  Q
    |||||||| |||||| |||||||    || |||| |||| |||||||||| |||||||||||||||||||||  ||| ||||||||||||||| ||   |    
T  42020022 gggtagaatttatgtttgttcttataaagcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattgatagtgaatttga 42019923  T
Q  108 tagaacaatctc-cccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
     ||| |||||||  ||||| ||||||| ||||||||||| ||| |||||||||    
T  42019922 gagatcaatctcttccccatagtaggttattgttggaccaaattggataaaca 42019870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 30833357 - 30833457
Alignment:
Q  3 gagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgga 102  Q
    |||||| |||||||||||| |  ||||||| ||||  ||||  |||||||||||||| ||| |||||||||||||||   ||||||||||||||||||||    
T  30833357 gagaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtgga 30833456  T
Q  103 t 103  Q
    |    
T  30833457 t 30833457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 7815392 - 7815330
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  7815392 ttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcatttatagtggat 7815330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 29867884 - 29868025
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| |||||||| |||||||||||| |    
T  29867884 aaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattg 29867982  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||||| |||||||  |||||||||||    
T  29867983 gagagatcaatctctcccccaaattaggtca-agttggaccgaa 29868025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 36988185 - 36988087
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| || ||| |||||||||   ||||||||||    
T  36988185 taatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 36988087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5723414 - 5723313
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||| |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| |||  |||||||||||||||| ||||||||||||||||||    
T  5723414 ttgagaaaagggtagaaattaggcttgttctttgtgaacttgtcaaagctaatttcttgtaacctttttgtatctctttgt-aagaactcattgatagtg 5723316  T
Q  101 gat 103  Q
    |||    
T  5723315 gat 5723313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 6595154 - 6595017
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| |||||| |||||||||| |||||||| |||||||||||| | | ||    
T  6595154 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgt-aagaactcgttgatagtggattggagag 6595056  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | ||||||| || ||| |||||||||   ||||||||||    
T  6595055 atcaatctctcctccagagtaggtcaagtttggaccgaa 6595017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 38312255 - 38312372
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||  |||||||||| ||| | ||||||||||||||| |||| |||||||||||||||| |    
T  38312255 aaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagatctcattgatagtggattg 38312353  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  38312354 gagagatcaatctctcccc 38312372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 42288263 - 42288123
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||| ||| ||| | ||||||| ||||||| |||| |||||||||| ||||| |    
T  42288263 aaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatttctttgt-aagagctcattgataatggattg 42288165  T
Q  106 aatagaacaatctccccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| ||||| | |||||||  |||||||||||    
T  42288164 gagagatcaatctctccccagattaggtca-agttggaccgaa 42288123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 45099774 - 45099865
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  45099774 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcattgatagtggat 45099865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 4503280 - 4503190
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  4503280 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcattgatagtggat 4503190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 11690516 - 11690612
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||| ||||| || ||||||||||||    
T  11690516 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaaatcgttgatagtggat 11690612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 35447037 - 35446941
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| ||||||||||| |  ||||||| ||||  ||||||||  |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  35447037 aaattggtagaaattagggttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 35446941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 4484487 - 4484387
Alignment:
Q  3 gagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgga 102  Q
    |||||| |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| |||||||||||||||   ||||||||||||||||||||    
T  4484487 gagaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtgga 4484388  T
Q  103 t 103  Q
    |    
T  4484387 t 4484387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 14633979 - 14633837
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| ||||   |||||||||| |||||||||| |    
T  14633979 aaatgggtagaaattaggattgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttttgtaagaactcatagatagtggattg 14633880  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  14633879 gagagatcaatctctcccccagattaggtca-agttggaccgaa 14633837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 34139924 - 34139782
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | | |||||| ||||   ||||||||||||||||||||| |    
T  34139924 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatcccttttgtaagaactcattgatagtggattg 34139825  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  34139824 gagagatcaatctctcccccagattaggtca-agttggaccgaa 34139782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 12123718 - 12123644
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||  ||| |||||||||| | |||||||| ||||||||||||||  ||||||||||||||| ||||||||    
T  12123718 tgttctttatgattttgttgaagcttatttcttgtaactcttttgtatcattttgtaaagaactcaatgatagtg 12123644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 28671987 - 28672089
Alignment:
Q  48 gttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccg 146  Q
    ||||||||||||  ||  ||||||||||||||  |||||||||| ||| ||||||| | | ||| ||||||| || ||| ||||||||||||||||||||    
T  28671987 gttaatttcttgttaccgttttgtatctctttacaaagaactcactgacagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 28672086  T
Q  147 aat 149  Q
    |||    
T  28672087 aat 28672089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 11151744 - 11151648
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||  | ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||| |||||||| | ||||||||||    
T  11151744 aaatgggtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcactttgt-aagaactcttagatagtggat 11151648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 34811370 - 34811281
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||||| |  || |||| | ||| ||||||||| |||||| ||| ||||||||| |||||||||||||  |||||||||||||||    
T  34811370 ggtagaaattaagattgctcttagagagcttgttgaagctaatttattgtaactcttttatatctctttgtaagaaactcattgatagtg 34811281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 11067320 - 11067461
Alignment:
Q  6 aaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |||| || ||| ||||| ||||  ||| |||||||||| ||| | ||||||||||||||| ||||||||||| ||| |||||     
T  11067320 aaatgggtagaaatta-gtgttgtactttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcatttataatggatt 11067417  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||| ||| ||||||| |||||| | |||||||  |||||||||||    
T  11067418 gaagagatcaatctctcccccagattaggtca-agttggaccgaa 11067461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 7451167 - 7451229
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||| |||||||||| || || ||||||||||||||| || ||||||||||||||||||    
T  7451167 ttgttgaagctaatttcttgtaattcatttgtatctctttgt-aataactcattgatagtggat 7451229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 14202558 - 14202499
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc 65  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||||| |||||    
T  14202558 aaatgggtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtaactc 14202499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 7597120 - 7597074
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgat 96  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||    
T  7597120 taatttcttgtaagtcttttgtatctttttgtaaagaactcattgat 7597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 11049596 - 11049681
Alignment:
Q  34 gtgagtttgttgaagttaatttcttgcaactctttt-gtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc 119  Q
    ||||| ||||||||| |||||||||  ||| ||||| |||||||||||||| ||||||||||||||| ||| ||| ||| |||||||    
T  11049596 gtgagcttgttgaagctaatttcttataacccttttagtatctctttgtaa-gaactcattgatagtagattgaaaagatcaatctc 11049681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 13121804 - 13121878
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||| ||||||||| |||||||||| |||   |||||||||||||||| | ||||||||||||||||||    
T  13121804 tgttctttgtgagcttgttgaagataatttcttgtaacc--tttgtatctctttgtaga-aactcattgatagtggat 13121878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 32289577 - 32289671
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||| |||||||||||| |  ||||||| ||||  ||||  ||  |||||||||| |||||||||||||||||||   |||||||||||||||||    
T  32289577 gaaaagggtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagt 32289671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 41446159 - 41446237
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaact 89  Q
    |||||||||||||| ||||||| | ||| ||||||||| ||||||   | ||| ||||||||||||||| |||||||||    
T  41446159 ggtagaaattatgtttgttctttgagagcttgttgaagctaattttaagtaacccttttgtatctctttataaagaact 41446237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 3897041 - 3897102
Alignment:
Q  42 gttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| |||||| ||| |||||||||||||   ||||||||||||||||||| |||||||    
T  3897041 gttgaagctaattttttgtaactcttttgtataattttgtaaagaactcattgaaagtggat 3897102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 36205812 - 36205730
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattga 95  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||||||||||||||||||||  |||||||||||||    
T  36205812 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcattga 36205730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 4561137 - 4561197
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||| |||||||||| |||  ||||||||||||||||||| || |||||| |||||    
T  4561137 ttgttgaagctaatttcttgtaacatttttgtatctctttgtaaaaaattcattgttagtg 4561197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 36283038 - 36282975
Alignment:
Q  39 tttgttgaagttaatttcttgcaactcttttgtatc--tctttgtaaagaactcattgatagtg 100  Q
    ||||||||||||||||||||| ||||||||| ||||  | || ||||||||||| |||||||||    
T  36283038 tttgttgaagttaatttcttgtaactcttttttatctatattagtaaagaactctttgatagtg 36282975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 19401318 - 19401369
Alignment:
Q  52 atttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||| |||||| || |||||||||||||| |||| |||||||||||||    
T  19401318 atttcttgtaactctattatatctctttgtaaaaaacttattgatagtggat 19401369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 316772 - 316920
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||  ||||||||||| || ||||||||| ||| ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||| ||    
T  316772 ttgagaaaaaggtagaaattaggtttgttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatg 316871  T
Q  101 gatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||| | |  || ||||||| |||| | ||||||||||||||||||||||    
T  316872 gatcggagggatcaatctctcccctagagtaggtcattgttggaccgaa 316920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10054974 - 10054830
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||  ||| ||||||||||||||||||| ||||||||||||||||    
T  10054974 ttgagaaatgggtagaaattatgtttgttcttgaagagtttgttgaagctaatttcttataac-cttttgtatctctttgtaatgaactcattgatagtg 10054876  T
Q  101 gatagaatagaacaatctc-cccccaaagtaggtcattgttggacc 145  Q
     || | | | | |||| || |||||||||| ||| |||||||||||    
T  10054875 tattggagatatcaatatctcccccaaagtgggtaattgttggacc 10054830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 28278331 - 28278472
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||||| |    
T  28278331 aaatgggtagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattg 28278429  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  28278430 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 28278472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35616179 - 35616278
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| |||||||||| || ||||||||| ||| | ||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  35616179 ttgagaaatgagtagaaattaggtttgttcttggagagctcgtttaagttaatttcttgtaacccttttgtatttctttgtaaagaactcattgatagtg 35616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 40147276 - 40147417
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  40147276 aaatgggtagaaattagggttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 40147374  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  40147375 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 40147417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 33831695 - 33831812
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  33831695 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 33831793  T
Q  106 aatagaacaatctcccccc 124  Q
    || ||| ||||||| ||||    
T  33831794 aagagatcaatctctcccc 33831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 42426388 - 42426271
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||| |    
T  42426388 aaatgggtagaaattagggttgttctttgtgaaattgttgaagctaatttcttgcaacccatttgtatctctttgt-aagaactcattgatagtggattg 42426290  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  42426289 gagagatcaatctctcccc 42426271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 213480 - 213622
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  213480 aaatgggtagaaattagggttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 213578  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||   ||||||||||    
T  213579 gagagatcaatctctcctccatagtaggtcaagtttggaccgaa 213622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 16452095 - 16452236
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || |||||||  |||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||| ||||||||| |    
T  16452095 aaatgggtagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattcatagtggattg 16452193  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | |||  |||||| |||||| |||||||||  |||||||||||    
T  16452194 gagagataaatctctcccccagagtaggtca-agttggaccgaa 16452236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42310094 - 42309992
Alignment:
Q  1 ttgagaaat-gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    ||||||||| |||||||||| | || || |||| ||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  42310094 ttgagaaattgggtagaaatcaagtttgatctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaacttattgatagt 42309996  T
Q  100 ggat 103  Q
    ||||    
T  42309995 ggat 42309992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 42428583 - 42428442
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||  | ||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  42428583 aaatgggtagaaattatggtttttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 42428485  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  42428484 gagagatcaatctctcccccatattaggtca-agttggaccgaa 42428442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 13239771 - 13239908
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  | ||||| ||||  ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | | ||    
T  13239771 ggtagaaattagggtttttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagag 13239869  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | ||||||| || ||| |||||||||   ||||||||||    
T  13239870 atcaatctctcctccagagtaggtcaaatttggaccgaa 13239908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 13488218 - 13488335
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  13488218 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 13488316  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  13488317 gagagatcaatctctcccc 13488335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 37439161 - 37439298
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | | ||    
T  37439161 ggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagag 37439259  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | ||||||| || ||| |||||||||   ||||||||||    
T  37439260 atcaatctctcctccagagtaggtcaagtttggaccgaa 37439298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 13695824 - 13695747
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||| ||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  13695824 tgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattaatagtggat 13695747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 32609580 - 32609641
Alignment:
Q  36 gagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  32609580 gagtttgttgaagttaatttcttgtaactcttttgtatttctttgtaaagaacttattgata 32609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 39468702 - 39468606
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  39468702 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 39468606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 533784 - 533925
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  || |||| ||||| ||||||||| |||||| ||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  533784 aaatgggtagaaattagggttggtctttgtgagcttgttgaagctaattttttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 533882  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  533883 gaaagatcaatctctcccccatattaggtca-agttggaccgaa 533925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 538040 - 538181
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  || |||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||| |    
T  538040 aaatgggtagaaattaaggttgctctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtagattg 538138  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  538139 gagagatcaatctctcccccatattaggtca-agttggaccgaa 538181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 33906185 - 33906042
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||| |||||| ||  || ||||| ||| |||| |||| ||| |||||| ||  ||||||||||||||||||||||||||||||||||| |||     
T  33906185 gaaatgggtataaattaggttagtgcttggagagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagatt 33906086  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccga 147  Q
    | | ||| |||||||  ||| | ||||||||| |||||||||||    
T  33906085 ggaaagatcaatctcttccctagagtaggtcaatgttggaccga 33906042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 31182987 - 31183082
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||||||||| |||||||||||||| ||| | |||||||| |||||| ||||||||||||||| |||||    
T  31182987 aaatgggtagaaattaggattgttctttgtgagtttgtttaagttaatttcttgtaac-catttgtatccctttgt-aagaactcattgatactggat 31183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 38747020 - 38747116
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | |||||||||||||| ||| ||||||||||||| ||||    
T  38747020 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttggaaa-aactcattgatagaggat 38747116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28750808 - 28750666
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  |||||||  |||  ||||||||||||||||| || ||| | ||||||||| ||||| ||||||||||||||||||||| |    
T  28750808 aaatgggtagaaattagggttgttctttatgaaattgttgaagttaatttcctgtaacccatttgtatctttttgt-aagaactcattgatagtggattg 28750710  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaat 149  Q
     | ||| ||||||| |||||| | |||||||  ||||||||||||    
T  28750709 gagagatcaatctctcccccagattaggtca-agttggaccgaat 28750666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 25412774 - 25412904
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||| |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||     
T  25412774 gaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggatt 25412872  T
Q  105 gaatagaacaatctc-cccccaaagtaggtca 135  Q
    | | ||| ||||||| || ||| |||||||||    
T  25412873 ggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 32636839 - 32636980
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| |||||||| |||||||||||| |    
T  32636839 aaatgggtagaaattatggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattg 32636937  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  32636938 gagagatcaatctctcccccagattaggtca-agttggaccgaa 32636980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 9049467 - 9049343
Alignment:
Q  34 gtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtagg 132  Q
    ||||| ||||||||| |||||||||| |||  |||||||||||||||| ||||||||||||| ||||||| | | ||| |||| || |||||||||||||    
T  9049467 gtgagcttgttgaagctaatttcttgtaaccattttgtatctctttgt-aagaactcattgacagtggattggagagatcaatatctcccccaaagtagg 9049369  T
Q  133 tcattgttggaccgaatcggataaaca 159  Q
    | |  |||||||||||  |||||||||    
T  9049368 tga-agttggaccgaaatggataaaca 9049343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 22097883 - 22097974
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||||| || ||||||||||||||||||||  ||| |  |||||||| |||||||| ||||||||||||||||||    
T  22097883 gggtagaaattagggttgttcttggagaatttgttgaagttaatttcttataaccc--ttgtatctatttgtaaaaaactcattgatagtggat 22097974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 8566099 - 8566003
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| ||| || ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| || ||| |||||||||||||||||||||    
T  8566099 aaatgggtagaacttaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctctgt-aagaactcattgatagtggat 8566003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 3325933 - 3326025
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||  | ||||||||  ||| ||||||||| |||||||||| |||  || ||||||||||||||||||||||| |||| ||||||    
T  3325933 ggtagaaattagttttgttcttgaagagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatggtggat 3326025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 27637766 - 27637624
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  |||||||  |||| ||||| ||  |||||||||| ||| | |||||||||||||||||| ||||||||| |||||||||     
T  27637766 aaatgggtagaaattagggttgttctttatgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaa-gaactcatt-atagtggatt 27637669  T
Q  105 gaatagaacaatctccccc-caaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| ||  || ||||||||||||||||||||||    
T  27637668 ggagagatcaatctctcctgcagagtaggtcattgttggaccgaa 27637624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 36074151 - 36074054
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||| | | ||  ||||||| || |||||||||||||   ||||||||||    
T  36074151 taatttcttgtaactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggaccgaa 36074054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 32583429 - 32583342
Alignment:
Q  13 tagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||  |||||||||  || ||||||||| |||||   || | ||||||||||||| ||||||||||||||||||||||||    
T  32583429 tagaaattatgattgttcttggaaaggttgttgaagctaattatgtgtatctcttttgtatctttttgtaaagaactcattgatagtg 32583342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 5058062 - 5058156
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||  ||||| ||||||||| || ||||||| | | | ||||||||||||||| |||||||||||||||||||||    
T  5058062 aaatgggtagaaattagggttgttct--gtgagcttgttgaagctattttcttgtatcccatttgtatctctttgt-aagaactcattgatagtggat 5058156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 8445761 - 8445823
Alignment:
Q  37 agtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||||||||| |||||||||| ||| ||||||||| ||||| ||||||||| |||||||||    
T  8445761 agtttgttgaagctaatttcttgtaacccttttgtatttctttataaagaactaattgatagt 8445823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 26177895 - 26177993
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| |||||||||||| |  ||||||| ||||  ||||  ||  |||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  26177895 gaaaagggtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggat 26177993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 9789334 - 9789281
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  9789334 taatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggat 9789281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 16409533 - 16409586
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  16409533 taatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggat 16409586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 18441758 - 18441705
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  18441758 taatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggat 18441705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 13343080 - 13343217
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||  ||||||||||||||||  ||||||||||||||||||||| | | |    
T  13343080 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctctttg--aagaactcattgatagtggattggaga 13343177  T
Q  110 gaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |  ||||||| || ||| ||||||||||  ||||||||||    
T  13343178 gttcaatctctcctccagagtaggtcatgtttggaccgaa 13343217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30802839 - 30802934
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    |||| |||||||||||| ||| || ||||||| ||||| ||||||||  |||||| ||| ||  ||||||||||| |||||||||||||| ||||||    
T  30802839 ttgaaaaatgggtagaa-ttaggtttgttctttgtgagcttgttgaaactaatttattgtaatccttttgtatctatttgtaaagaactcgttgata 30802934  T

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Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 30683056 - 30682934
Alignment:
Q  27 gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaaga-actcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    |||||| ||||  ||||||||| |||||||||| ||| ||||||||| |||||||||  | ||||||||||||||||| | | ||| ||||||| |||||    
T  30683056 gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctccccc 30682957  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | | |||||||  |||||||||||    
T  30682956 agattaggtca-agttggaccgaa 30682934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 42926911 - 42926968
Alignment:
Q  35 tgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcatt 93  Q
    |||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||    
T  42926911 tgagattgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcatt 42926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 5887569 - 5887492
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaa 83  Q
    |||||| |||||||||  | ||||||| ||||| ||||| ||| |||||||||||||| | |||||||| ||||||||    
T  5887569 aaatggatagaaattagatttgttctttgtgagcttgtttaagctaatttcttgcaacccatttgtatcactttgtaa 5887492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 10700796 - 10700708
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||||| || ||||||| | ||| ||||||||| ||||| |||  |||  ||||||||||||||  |||||||||||||||||||    
T  10700796 ggtagaaattaggtttgttcttagagagcttgttgaagctaatt-cttataacatttttgtatctctttaaaaagaactcattgatagtg 10700708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 16641086 - 16641013
Alignment:
Q  11 ggtagaaatta-tgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaa 83  Q
    ||||||||||| ||| ||||||| ||||| ||||||||| | ||||||   |||||||||||||||||||||||    
T  16641086 ggtagaaattagtgtttgttctttgtgagcttgttgaagctgatttctgataactcttttgtatctctttgtaa 16641013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 19806398 - 19806449
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttctt 58  Q
    |||||||||||||||| || ||||||| ||||||||||||||| |||||||||    
T  19806398 aaatgggtagaaattaggt-tgttctttgtgagtttgttgaagctaatttctt 19806449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 30182608 - 30182699
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||| ||||||||||  |||||||||||||||||||||    
T  30182608 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttctatctctttg-gaagaactcattgatagtggat 30182699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14689585 - 14689502
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaa 84  Q
    |||| |||| |||||||||||||| ||||| ||| | | ||||||||| |||||| ||| ||   |||||||||||||||||||    
T  14689585 ttgaaaaattggtagaaattatgtttgttcatggagtgcttgttgaagctaattttttgtaatatttttgtatctctttgtaaa 14689502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 3075811 - 3075718
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| ||||||||||| || ||||||| ||||| ||| ||||  |||||||||| ||| | ||||||||| ||||| ||||| || |||||||||    
T  3075811 aaataggtagaaattaggtttgttctttgtgagcttgctgaatctaatttcttgtaacccatttgtatctttttgt-aagaattcgttgatagtg 3075718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 5007806 - 5007840
Alignment:
Q  66 ttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| ||||||||||||||||||||||||||||||    
T  5007806 ttttctatctctttgtaaagaactcattgatagtg 5007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 27015599 - 27015679
Alignment:
Q  67 tttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||||||||||||||||| ||||||||||||||||||| | | ||| ||||||| || ||||| |||||||  |||||||||||    
T  27015599 tttgtatctctttgtaa-gaactcattgatagtggattgtacagatcaatctctcctccaaaataggtca-agttggaccgaa 27015679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 30793211 - 30793245
Alignment:
Q  66 ttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||||||||||| ||||||||||    
T  30793211 ttttgtatctctttgtaaagaactaattgatagtg 30793245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 8038235 - 8038292
Alignment:
Q  30 cttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaa 87  Q
    ||||| ||| || |||||| ||| ||||||||||||||||||||| |||| |||||||    
T  8038235 cttggagagcttcttgaagctaacttcttgcaactcttttgtatcactttttaaagaa 8038292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 2149277 - 2149213
Alignment:
Q  40 ttgttgaagttaatttcttgcaa-ctcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||||||| || ||||||| ||||| |||||||  || | |||||||||||||    
T  2149277 ttgttgaagttaatttcttgtaacctcttttatatctttttgtaagaaatttattgatagtggat 2149213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 27591 - 27452
Alignment:
Q  12 gtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||||| | |||||||  ||| ||||||||| |||||||||| ||||| |||||||||||||||||| |||| ||||||||||||| | | ||    
T  27591 gtagaaattatgtattgttcttgaagagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagag 27492  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggaccgaat 149  Q
    | ||||||| |||||| |||||||||||||||||||||||    
T  27491 atcaatctctcccccatagtaggtcattgttggaccgaat 27452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 5043642 - 5043784
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| || ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||| |    
T  5043642 aaatgagtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtagattg 5043740  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| ||||||||||||||||||||||    
T  5043741 gagagatcaatctctcctccatagtaggtcattgttggaccgaa 5043784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 2973092 - 2972963
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  2973092 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 2972994  T
Q  106 aatagaacaatctccccccaa-agtaggtca 135  Q
     | ||| ||||||| || ||| |||||||||    
T  2972993 gagagatcaatctctcctcaagagtaggtca 2972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 17758038 - 17758153
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  17758038 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 17758136  T
Q  106 aatagaacaatctcccc 122  Q
     | ||| ||||||||||    
T  17758137 gagagatcaatctcccc 17758153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 26954440 - 26954298
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    ||||| |||| |||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| | ||||||||||||| |||||||||||||||||||||     
T  26954440 gaaattggtataaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatctgtatctctttgt-aagaactcattgatagtggatt 26954342  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| ||||||||||||||||  |||||||||||    
T  26954341 ggagagatcaatctctcccccaaagtaggtca-agttggaccgaa 26954298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 21588946 - 21589087
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  21588946 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 21589044  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  21589045 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 21589087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 21593679 - 21593820
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  21593679 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 21593777  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  21593778 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 21593820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 9183184 - 9183088
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| |||| |||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  9183184 aaatgggtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 9183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28137561 - 28137419
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | ||||||| ||||||| ||||||||||||||||||||| |    
T  28137561 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttctttgt-aagaactcattgatagtggattg 28137463  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaat 149  Q
     | ||| ||||||| |||||| |||||||||  ||||||||||||    
T  28137462 gagagatcaatctctcccccagagtaggtca-agttggaccgaat 28137419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 33211338 - 33211197
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| |||||||||||||  ||||||| ||||| ||| |||||||||||||||| | ||| ||||||||||||||| ||||||||||| ||| ||||| |    
T  33211338 aaattggtagaaattatggttgttctttgtgagcttgatgaagttaatttcttgtagctcatttgtatctctttgt-aagaactcatttataatggattg 33211240  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| |||||||||  |||||||||||    
T  33211239 gagagatcaatctctcccccagagtaggtca-agttggaccgaa 33211197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 26830276 - 26830147
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||    ||||||| ||||| ||||||||| |||||||||| ||  | ||||||||||||||| ||||||||||||||||||||| |    
T  26830276 aaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctctttgt-aagaactcattgatagtggattg 26830178  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
     | ||| ||||||| || |||||||||||||    
T  26830177 gagagatcaatctctcctccaaagtaggtca 26830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 17763005 - 17763101
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||| ||||  |||||||||||||||||||||    
T  17763005 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctttttg-gaagaactcattgatagtggat 17763101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 2908507 - 2908614
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctccccccaaagtaggtcattgt 139  Q
    ||||||||| |||||| || ||||||||||||||||  |||||||||||||||||||||||||| ||| | | |||||| |||| || || |||||||||    
T  2908507 ttgttgaagataattttttacaactcttttgtatcttattgtaaagaactcattgatagtggattgaagaaatcaatct-cccctaacgtcggtcattgt 2908605  T
Q  140 tggaccgaa 148  Q
    |||| ||||    
T  2908606 tggaacgaa 2908614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 3808862 - 3808719
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||| ||||||||||| |  ||||||| ||||| ||||||||  |||||||||| ||| | |||||||||||||||| |||||||||||||||||||||     
T  3808862 aaataggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggatt 3808764  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| || ||| ||||||||||  ||||||||||    
T  3808763 ggagagatcaatctctcctccagagtaggtcatgattggaccgaa 3808719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 26800629 - 26800744
Alignment:
Q  33 ggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccc-ccaaagta 130  Q
    |||||| ||||||||| |||||||||| ||||  |||||||||||||||||| ||||||||| ||||||||| | | ||| ||||||| || ||| ||||    
T  26800629 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagta 26800726  T
Q  131 ggtcattgttggaccgaa 148  Q
    ||||||||||||||||||    
T  26800727 ggtcattgttggaccgaa 26800744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 22424980 - 22424839
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc--ttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| |  |||||||||||||||| ||||||||||| |||||||||    
T  22424980 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttttgtatctctttgt-aagaactcatt-atagtggat 22424883  T
Q  104 agaatagaacaatctc-cccccaaagtaggtcattgttggaccg 146  Q
     | | ||| ||||||| ||  || ||||||||||||||||||||    
T  22424882 tggagagatcaatctctccttcagagtaggtcattgttggaccg 22424839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 603238 - 603145
Alignment:
Q  9 tgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| ||||| |||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| ||||||||||||    
T  603238 tgggtagaaatt-tgtgttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggat 603145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 186734 - 186820
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    ||||||||| | || ||||||||| ||| ||||||||||||| || ||  | ||||||||||||||||||||||||| |||||||||    
T  186734 ggtagaaataaggtttgttcttggagagcttgttgaagttaaatttttatagctcttttgtatctctttgtaaagaattcattgata 186820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 5406348 - 5406224
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | | ||    
T  5406348 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 5406250  T
Q  111 aacaatctc-cccccaaagtaggtca 135  Q
    | ||||||| || ||| |||||||||    
T  5406249 atcaatctctcctccagagtaggtca 5406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 5410673 - 5410549
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | | ||    
T  5410673 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 5410575  T
Q  111 aacaatctc-cccccaaagtaggtca 135  Q
    | ||||||| || ||| |||||||||    
T  5410574 atcaatctctcctccagagtaggtca 5410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 25073588 - 25073680
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||  | | ||||| ||||| ||||| ||| || ||| ||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  25073588 ggtagaaattagatttattcttcgtgagcttgttaaagctattttattgtaacccttttgtatctctatgtaaagaactcattgatagtggat 25073680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 31404823 - 31404732
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  31404823 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggat 31404732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 5413503 - 5413405
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| || ||| |||||||||   ||||||||||    
T  5413503 taatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 5413405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 4045458 - 4045535
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||  |||| ||||||||| |||||||||| ||   |||| |||||||||||||| ||||||||||||||||||    
T  4045458 tgttctttatgagcttgttgaagctaatttcttgtaatcattttatatctctttgtaaataactcattgatagtggat 4045535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 30834685 - 30834593
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  30834685 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg-gaagaactcattgatagtggat 30834593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 33160461 - 33160409
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  33160461 taatttcttgtaactcttttgtatctctttgt-aagaactcattgatggtggat 33160409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 3039056 - 3038960
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| ||||||||||| |  ||||| | ||||| || |||||| |||||||||| ||| | ||||||||||||||| |||||||| || |||||||||    
T  3039056 aaattggtagaaattagggttgttcattgtgagctttttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttaatagtggat 3038960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 2171679 - 2171589
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| |||| |||||||||||||| |||||||||||||||||||    
T  2171679 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt-gtatctctttgtaa-gaactcattgatagtggat 2171589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 5409163 - 5409080
Alignment:
Q  65 cttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||||||||||||||||||| ||||||||||||||||||| | | ||| ||||||| || ||| |||||||||   ||||||||||    
T  5409163 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 5409080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 12221258 - 12221163
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||| ||| |||||| || ||||||||  || || ||||||  |||||| ||| |||||||||||||| |||||||||||| | ||||| ||||    
T  12221258 gaaatgagtataaattaggtttgttcttgaagaattcgttgaaactaattttttgtaactcttttgtatcactttgtaaagaattaattgacagtg 12221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 412159 - 412213
Alignment:
Q  50 taatttcttgcaactctttt-gtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| ||||||||| ||||||||||   |||||||||||||||||||||    
T  412159 taatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggat 412213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 32247142 - 32247080
Alignment:
Q  42 gttgaagttaatttcttgcaa-ctcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||| ||||||| |||||| |||||||| ||||||||||||  | ||||||||||||||||    
T  32247142 gttgaaattaatttattgcaatctcttttgcatctctttgtaagaatctcattgatagtggat 32247080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 16452478 - 16452386
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||  |||||||||| || |||||||||||||||||||    
T  16452478 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttcatatctctttggaa-gaactcattgatagtggat 16452386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 27106234 - 27106178
Alignment:
Q  16 aaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgta 72  Q
    |||||| ||||||| |||  ||| ||||||||| |||||||||| ||||||||||||    
T  27106234 aaattaagtgtgttgttgaagagattgttgaagctaatttcttgtaactcttttgta 27106178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 27148040 - 27147984
Alignment:
Q  16 aaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgta 72  Q
    |||||| ||||||| |||  ||| ||||||||| |||||||||| ||||||||||||    
T  27148040 aaattaagtgtgttgttgaagagattgttgaagctaatttcttgtaactcttttgta 27147984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 12073407 - 12073549
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  12073407 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 12073505  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |  ||| ||||||||||||||||||||||    
T  12073506 gagagatcaatctctcttccagagtaggtcattgttggaccgaa 12073549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22882909 - 22882752
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| |||||| || |||||| || ||||||||| ||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  22882909 ttgaaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtg 22882810  T
Q  101 gatagaatagaacaatctccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
    |||   | | | |||||| |||||  ||||||||||||||||||||||  |||||||||    
T  22882809 gattagagaaatcaatct-cccccggagtaggtcattgttggaccgaactggataaaca 22882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22934573 - 22934416
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| |||||| || |||||| || ||||||||| ||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  22934573 ttgaaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtg 22934474  T
Q  101 gatagaatagaacaatctccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
    |||   | | | |||||| |||||  ||||||||||||||||||||||  |||||||||    
T  22934473 gattagagaaatcaatct-cccccggagtaggtcattgttggaccgaactggataaaca 22934416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 12119559 - 12119696
Alignment:
Q  12 gtagaaattatg-tgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    |||||||||||| | ||||||| ||||  || |||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| | | ||    
T  12119559 gtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagag 12119658  T
Q  111 aacaatctccccccaaagtaggtcattgttggaccgaa 148  Q
    | ||||||| ||| | ||||||||||||||||||||||    
T  12119659 atcaatctctcccaagagtaggtcattgttggaccgaa 12119696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 379395 - 379537
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||||||||| ||| | |||||||| |||||| ||||||| ||||||||||||| |    
T  379395 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttgt-aagaactaattgatagtggattg 379493  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| ||||||||||||||||||||||    
T  379494 gagagatcaatctctcctccagagtaggtcattgttggaccgaa 379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 26699576 - 26699453
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| | | ||| |||||||   |||    
T  26699576 tgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatccc 26699477  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | ||||||||||||||||||||||    
T  26699476 agagtaggtcattgttggaccgaa 26699453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 35662456 - 35662552
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  |||||||  |||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  35662456 aaatgggtagaaattagggttgttctttatgagtttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 35662552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 32091500 - 32091583
Alignment:
Q  13 tagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgat 96  Q
    ||||||||| || ||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||    
T  32091500 tagaaattaggtttgttcttggagagtttgttgaaactaatttcttgtaactcttttgtatctctttgtaaagaacacattgat 32091583  T

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Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 6655971 - 6656067
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  6655971 aaatgggtagaaattaaggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 6656067  T

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Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 24969127 - 24969223
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||  | ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||    
T  24969127 aaatgggtagaaattagatttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactaattgatagtggat 24969223  T

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Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 34112838 - 34112974
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaataga 111  Q
    ||||||||||||| |||||| || ||| ||||||||| ||||||| || ||| |||||| ||||||||||||||||||||||||||||| |  | | |||    
T  34112838 gtagaaattatgtttgttctaggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagaga 34112937  T
Q  112 acaatctccccccaaagtaggtcattgttggaccgaat 149  Q
     |  ||| |||| | |||||||||||||||||||||||    
T  34112938 tctctct-cccctatagtaggtcattgttggaccgaat 34112974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 46703515 - 46703659
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    ||||| |||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||||||||||||| ||||||||| |||||||||     
T  46703515 aaatgagtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcatttatagtggatt 46703613  T
Q  105 gaatagaacaatctcccc-ccaaagtaggtcattgttggaccgaat 149  Q
    | | ||| ||||||| || ||| |||||||||||||||||||||||    
T  46703614 ggagagatcaatctctcctccagagtaggtcattgttggaccgaat 46703659  T

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Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 2209728 - 2209871
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  | ||||| ||||| ||||||||| |||||||||| ||| | |||||||||||||||| |||||||||||||||||||||     
T  2209728 aaatgggtagaaattagggtttttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggatt 2209826  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | |||  |||||| || ||| |||||||||| |||||||||||    
T  2209827 ggagagattaatctctcctccagagtaggtcatggttggaccgaa 2209871  T

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Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 9927611 - 9927470
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  9927611 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 9927513  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  9927512 gagagatcaatctctcccccagattaggtca-agttggaccgaa 9927470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 27417118 - 27416977
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||||| |    
T  27417118 aaatgtgtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattg 27417020  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  27417019 gagagatcaatctctcccccagattaggtca-agttggaccgaa 27416977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 44570514 - 44570427
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatag 98  Q
    |||||||||||||| |||| |||| ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||||||||||||    
T  44570514 ggtagaaattatgtttgttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactcattgatag 44570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 46147544 - 46147403
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| |    
T  46147544 aaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactctttgatagtggattg 46147446  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | | | ||||||| |||||||| |||||||  |||||||||||    
T  46147445 gagacatcaatctctcccccaaattaggtca-agttggaccgaa 46147403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 56178786 - 56178648
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | | |    
T  56178786 gggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggaga 56178688  T
Q  110 gaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    || ||||||| || ||| |||||||||   ||||||||||    
T  56178687 gatcaatctctcctccagagtaggtcaagtttggaccgaa 56178648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 4587994 - 4588091
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccccc 124  Q
    ||||||| || || ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | | ||||||||||| ||||    
T  4587994 tgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagagaacaatctctcccc 4588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 8665423 - 8665552
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| | ||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  8665423 aaatgggtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 8665521  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
     | ||| ||||||| || ||| |||||||||    
T  8665522 gagagatcaatctctcctccagagtaggtca 8665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 26364251 - 26364368
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||| |    
T  26364251 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattaatagtggattg 26364349  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  26364350 gagagatcaatctctcccc 26364368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 31474165 - 31474258
Alignment:
Q  6 aaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||||||||||||| || | ||||||  |||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  31474165 aaatgggtagaaattaggtcttgttctttttgagtttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagt 31474258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 33089900 - 33089990
Alignment:
Q  13 tagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| ||||||||| ||| ||||||||| |||||| ||  |||  |||||||||||| |||||||||||||||||||||||||    
T  33089900 tagaaattatgtttgttcttggagagcttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtggat 33089990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 36994539 - 36994656
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | |||||||| |||||| ||||||||||||||||||||| |    
T  36994539 aaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattg 36994637  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  36994638 gagagatcaatctctcccc 36994656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 54883035 - 54883131
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  |||| || ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  54883035 aaatgggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 54883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 33989861 - 33989997
Alignment:
Q  8 atgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaa 107  Q
    ||||| ||||| || || ||||||| | ||||||||||||| |||||||||| ||  |||||||||||||||||||| ||||| || ||||||||| | |    
T  33989861 atgggaagaaactaggtttgttcttagagagtttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattgga 33989960  T
Q  108 tagaacaatctc-cccccaaagtaggtcattgttgga 143  Q
     ||| ||||||| || ||| ||||||||||| |||||    
T  33989961 gagatcaatctctccaccagagtaggtcattcttgga 33989997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 34788923 - 34788847
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaa 87  Q
    ||||||||||| |  || |||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34788923 ggtagaaattaggattgctcttggagagcttgttgaagttaatttcttgtaactcttttgtatctctttgtaaagaa 34788847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 50673977 - 50673859
Alignment:
Q  29 tcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaa 127  Q
    |||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| || ||| |    
T  50673977 tctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcctccaga 50673879  T
Q  128 gtaggtcattgttggaccgaa 148  Q
    ||||||||  |||||||||||    
T  50673878 gtaggtca-agttggaccgaa 50673859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 26175789 - 26175648
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||| |||||||| |  ||||||| ||||| ||||||||  |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  26175789 aaatggggagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 26175691  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  26175690 gagagatcaatctctcccccagattaggtca-agttggaccgaa 26175648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 50262834 - 50262712
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatc-tcccccc 124  Q
    ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||| | | | | ||||| | || ||    
T  50262834 tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagttgattggagatatcaatctttcctcc 50262736  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | ||||||||||||||||||||||    
T  50262735 agagtaggtcattgttggaccgaa 50262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 5349925 - 5350076
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||  |||| |||| ||||| |||| | ||| |||||||||||||||||||||||| |||||| || |  |    
T  5349925 aaatgggtagaaattaggtttgttctttgtgaacttgtcgaagctaattccttgtagctcgtttgtatctctttgtaaagaactcgttgataatgaagcg 5350024  T
Q  106 aatagaacaatctccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
     | ||| |  |||| ||||| |||||||||||||||||| |||| || ||||||    
T  5350025 gagagatc--tctctccccagagtaggtcattgttggactgaattgggtaaaca 5350076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 54200059 - 54199966
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||    
T  54200059 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtg 54199966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 38811347 - 38811202
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||| |||||| || ||||||||| |||||||||||| ||||||||| |  ||  |||||||| ||||||||||  ||||||||||||||    
T  38811347 ttgagaaatgggtacaaattaagtttgttcttggagagtttgttgaatttaatttctagtgaccattttgtat-tctttgtaaatgactcattgatagtg 38811249  T
Q  101 gatagaatagaacaatctccccccaa-agtaggtcattgttggaccgaa 148  Q
     |  | | ||| |  |||| |||||| ||||||||||||||||||||||    
T  38811248 aagcggagagatc--tctctccccaagagtaggtcattgttggaccgaa 38811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 40632460 - 40632556
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||    ||||||| ||||| ||||||||| |||||||||| |||   ||||||||||||||| |||||||||||||||||||||    
T  40632460 aaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgatagtggat 40632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 47038563 - 47038423
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| || || ||||||||| ||||| ||| ||||||||||||||||| |    
T  47038563 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaa-tcatttgtatctgtttgt-aaggactcattgatagtggattg 47038466  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| |||| ||||  |||||||||||    
T  47038465 gagagatcaatctctcccccagagtaagtca-agttggaccgaa 47038423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 48893763 - 48893650
Alignment:
Q  34 gtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtagg 132  Q
    ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| | | ||| ||||||| |||||| | ||||    
T  48893763 gtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactctttgatagtggattggagagatcaatctctcccccagattagg 48893665  T
Q  133 tcattgttggaccgaa 148  Q
    |||  |||||||||||    
T  48893664 tca-agttggaccgaa 48893650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 5429694 - 5429811
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| |  | ||||| ||||| ||||||||| |||||||||| ||| | ||||||||| ||||||| ||||||||||||||||||| |    
T  5429694 aaatgagtagaaattagggttattcttcgtgagcttgttgaagctaatttcttgtaacccatttgtatctatttgtaa-gaactcattgatagtggattg 5429792  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  5429793 gagagatcaatctctcccc 5429811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 8648154 - 8648283
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  ||||| | ||||||||||||||| |||||||||  ||| | ||||||||||||||| ||||||||||||||| ||||| |    
T  8648154 aaatggatagaaattagggttgttcattgtgagtttgttgaagctaatttcttataacccatttgtatctctttgt-aagaactcattgatattggattg 8648252  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
     | ||| ||||||| || ||| |||||||||    
T  8648253 gagagatcaatctctcctccagagtaggtca 8648283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 29254538 - 29254650
Alignment:
Q  35 tgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggt 133  Q
    |||| |||||||||||||||||||||||| | ||||| ||||||||| |||||||| |||||||||||| | | ||| ||||||| | |||||| |||||    
T  29254538 tgagcttgttgaagttaatttcttgcaacccatttgtgtctctttgt-aagaactcgttgatagtggattggagagatcaatctctctcccaaattaggt 29254636  T
Q  134 cattgttggaccgaa 148  Q
    ||  |||||||||||    
T  29254637 ca-agttggaccgaa 29254650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 34570567 - 34570450
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| |  |||||||||||||| ||||||||||||||||||||| |    
T  34570567 aaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctctttgt-aagaactcattgatagtggattg 34570469  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  34570468 gagagatcaatctctcccc 34570450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 37740660 - 37740757
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccccc 124  Q
    ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||    
T  37740660 tgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcccc 37740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 3913483 - 3913559
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||||||||||||| |||||||||  ||| | ||||||| ||||||| |||||||||||||||||||||    
T  3913483 tgttctttgtgagtttgttgaagctaatttcttttaacccatttgtatatctttgt-aagaactcattgatagtggat 3913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 48143063 - 48143187
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| ||||||||||||||  | ||||||||||||||||||||| | | ||    
T  48143063 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttcat-aagaactcattgatagtggattggagag 48143161  T
Q  111 aacaatctc-cccccaaagtaggtca 135  Q
    | ||||||| || ||| |||||||||    
T  48143162 atcaatctctcctccagagtaggtca 48143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 21703955 - 21703847
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctccccccaaagtaggtcattgt 139  Q
    ||||||||| | |||||||| | |  |||||||||| ||||||||||||||||||| ||||||| | | | | ||||||  ||||| |||||||||||||    
T  21703955 ttgttgaagatgatttcttgtaccctttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatccccatagtaggtcattgt 21703856  T
Q  140 tggaccgaa 148  Q
    | |||||||    
T  21703855 ttgaccgaa 21703847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 35369595 - 35369461
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||| |||||||||| || ||||||||||||| ||| ||||  |||||||||  |||||     |||||||||||||||||||||||||| ||| ||     
T  35369595 gaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-----tatctctttgtaaagaactcattgatggtgaatt 35369501  T
Q  105 gaatagaacaatctccccccaaagtaggtcattgttggacc 145  Q
    ||| ||  | |||| | |||| |||||||||||||||||||    
T  35369500 gaagaggtcgatct-ctcccatagtaggtcattgttggacc 35369461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 41964430 - 41964572
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||| ||| ||| | ||||||||| |||||| |||||||||||||||||||||     
T  41964430 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttattgtaacccattttgtatccctttgt-aagaactcattgatagtggatt 41964528  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| || ||| |||||||||  |||||||||||    
T  41964529 ggagagatcaatctctcctccagagtaggtca-agttggaccgaa 41964572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 6677506 - 6677581
Alignment:
Q  28 ttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||| ||||||||| |||||||||| ||| ||||||||| ||||||||||||| || |||||| |||||    
T  6677506 ttcttggagagcttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaagtctttgataatggat 6677581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12744078 - 12743937
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  12744078 aaataggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 12743980  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  12743979 gagagatcaatctctcccccatattaggtca-agttggaccgaa 12743937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12745467 - 12745326
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  12745467 aaataggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 12745369  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  12745368 gagagatcaatctctcccccatattaggtca-agttggaccgaa 12745326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16422765 - 16422666
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||  |||||||||||||| |||| || | ||| || |||||| |||||||| | ||| ||||||||| ||||||||| |||||||| |||||||    
T  16422765 ttgagaaaatggtagaaattatgtttgttttttgagagctttttgaagctaatttctagaaacccttttgtatatctttgtaatgaactcatggatagtg 16422666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 36463542 - 36463401
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| |||| ||||||| |    
T  36463542 aaatggatagaaattagggctgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgacagtggattg 36463444  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  36463443 gagagatcaatctctcccccagattaggtca-agttggaccgaa 36463401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 41639441 - 41639582
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  || |||||| |||||||||| ||| | ||||||||| ||||| |||||||||| |||||||||| |    
T  41639441 aaatgggtagaaattagggttgttctttgtgaactttttgaagctaatttcttgtaacccatttgtatctatttgt-aagaactcatcgatagtggattg 41639539  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  41639540 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 41639582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 48142511 - 48142440
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    ||||||| ||||| ||||||||| || ||||||| ||| ||| | |||||||||||||||||||||||||||    
T  48142511 tgttctttgtgagcttgttgaagctagtttcttgtaacccttgtatatctctttgtaaagaactcattgata 48142440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 52467507 - 52467390
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||| ||||| ||| | |||||||| |||||| || ||||  |||||||||||| |    
T  52467507 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcactttgt-aataactttttgatagtggattg 52467409  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  52467408 gagagatcaatctctcccc 52467390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 12745589 - 12745493
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||  ||  |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  12745589 aaatgggtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 12745493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 5370192 - 5370141
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgga 102  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  5370192 taatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtgga 5370141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 12744195 - 12744104
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  12744195 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 12744104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 29999961 - 29999817
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||| |||||||||||| |  ||||||| ||||   |||  ||| |||||||||| ||||||||||||||| |||   |||||||||||||||||||||     
T  29999961 gaaaagggtagaaattagggttgttctttgtgaacatgtcaaagctaatttcttgtaactcttttgtatcttttttgtaagaactcattgatagtggatt 29999862  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| || ||| |||||||||   ||||||||||    
T  29999861 ggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 29999817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 5207992 - 5207866
Alignment:
Q  10 gggtagaaattatg-tgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaat 108  Q
    |||||||||||| | | ||||||| ||||  ||||||||| |||||| ||||||| ||| | ||||| ||||||| ||||||||||||||||||| | |     
T  5207992 gggtagaaattagggtttgttctttgtgaacttgttgaagctaatttattgcaacccttgtatatctatttgtaa-gaactcattgatagtggattggaa 5207894  T
Q  109 agaacaatctc-cccccaaagtaggtca 135  Q
    ||| ||||||| | |||| |||||||||    
T  5207893 agatcaatctctctcccagagtaggtca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 6542312 - 6542191
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| ||||| ||||||||  ||||||||||  |  ||||||||||||||||| |||||||| |||||||||||| | | ||| ||||||| |||||    
T  6542312 tgttctttgtgagcttgttgaaactaatttcttgttagccttttgtatctctttgt-aagaactcgttgatagtggattggagagatcaatctctccccc 6542214  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    |  ||||||||  |||||||||||    
T  6542213 agggtaggtca-agttggaccgaa 6542191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 21688264 - 21688354
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||  |||||| ||| ||||| |||||||||||| |  |||||||||||||||    
T  21688264 aaatgggtagaaattagggttgttctttgtgagcttgttgaaactaattttttgtaactcatttgtatctcttcg-gaagaactcattgata 21688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 37755094 - 37754979
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| | || |||| ||||| |||||||||| |||  |||| ||||||||| |||| |||||||||||| ||| | ||| ||| ||||||| |||||    
T  37755094 tgttcttagagaatttggtgaagataatttcttgtaacctttttttatctctttctaaaaaactcattgataatggtttgaagagatcaatctctccccc 37754995  T
Q  125 aaagtaggtcattgtt 140  Q
    | ||||||| ||||||    
T  37754994 atagtaggtaattgtt 37754979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 53345254 - 53345329
Alignment:
Q  28 ttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||| ||||| ||||||||  |||||||||| ||| ||||| ||||| ||||||||||||||||| ||| |||||    
T  53345254 ttctttgtgagcttgttgaaactaatttcttgtaacccttttatatctttttgtaaagaactcattaatattggat 53345329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 45687336 - 45687239
Alignment:
Q  6 aaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| |||||||| || | |||||| ||||| ||||  ||| |||||||||  ||||| ||||||||| ||||||| |||||||||||||||||||    
T  45687336 aaatgggaagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatctatttgtaa-gaactcattgatagtggat 45687239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 5871835 - 5871931
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||| |||  ||||||||| ||| | ||| |||| |||||  |||||||| ||||||||||||    
T  5871835 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcactttg-caagaactctttgatagtggat 5871931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 13992401 - 13992350
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  13992401 taatttcttgtaactcttttgtatctc-ttgt-aagaactcattgatagtggat 13992350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 22629042 - 22628950
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttg--tatctctttgtaaagaactcattgatagtgga 102  Q
    |||||||||| |  || |||||| ||| || ||||||||||||||||  ||||||||||  | |||||| |||||||||||||||||| ||||    
T  22629042 gtagaaattaggattgctcttggagagcttattgaagttaatttcttataactcttttgcatctctcttagtaaagaactcattgatactgga 22628950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 52095515 - 52095419
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| ||||| || ||||||||||||    
T  52095515 aaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaaatctttgatagtggat 52095419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 55085518 - 55085442
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgta 82  Q
    |||| ||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||  | ||||||||||||||||    
T  55085518 aaataggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaaaccatttgtatctctttgta 55085442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12739703 - 12739562
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||| ||||||  ||||||||||||||||||| |    
T  12739703 aaatggatagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctatttgtat-gaactcattgatagtggattg 12739605  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  12739604 gagagatcaatctctcccccagattaggtca-agttggaccgaa 12739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 40975128 - 40975085
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaa 83  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  40975128 ttgttgaagttaatttctggtaactctattgtatctctttgtaa 40975085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 1122969 - 1122876
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaac-tcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||| ||||||||| || |||| ||||  | ||||||||||||||||| | | ||| | ||||||||||||||||||  ||||||||||||||    
T  1122969 aaatggatagaaattacgt-tgtttttggaaaatttgttgaagttaatttatagtaacattttttgtatctctttgtaagaaactcattgatagt 1122876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 12747909 - 12747792
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||| ||||||  ||||||||||||||||||| |    
T  12747909 aaatggatagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctatttgtat-gaactcattgatagtggattg 12747811  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  12747810 gagagatcaatctctcccc 12747792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 6200020 - 6199932
Alignment:
Q  14 agaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatc--tctttgtaaagaactcattgatagtg 100  Q
    |||||||| || ||||||| |  | |||||||||  |||||| ||| ||||||||||||||  | |||||||| |||||||||||||||    
T  6200020 agaaattaggtttgttcttagacactttgttgaaactaatttattgtaactcttttgtatctatatttgtaaataactcattgatagtg 6199932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 33090079 - 33090124
Alignment:
Q  190 tctttatctggtttattctttagttcggttgtggttttgctttaca 235  Q
    ||||||||| ||||||| ||| ||||| ||||||||||||||||||    
T  33090079 tctttatcttgtttattttttggttcgattgtggttttgctttaca 33090124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 37229871 - 37229733
Alignment:
Q  11 ggtagaaattatg-tgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttg-tatctctttgtaaagaactcattgatagtggatagaat 108  Q
    ||||||||||| | ||||||||| ||||| ||||| |||  ||||| ||| ||| |||||  ||||||||||||| ||||||||| ||||||||| | |     
T  37229871 ggtagaaattagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgtaa-gaactcatttatagtggattggag 37229773  T
Q  109 agaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||| ||||||| ||| || |||||||||  |||||||||||    
T  37229772 agatcaatctctccctcatagtaggtca-agttggaccgaa 37229733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 51904554 - 51904491
Alignment:
Q  13 tagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctct 77  Q
    |||||||||  | ||||||||| |||||||| |||  |||||||||||||||| |||||||||||    
T  51904554 tagaaattagatatgttcttggagagtttgtcgaatctaatttcttgcaactc-tttgtatctct 51904491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 47255493 - 47255351
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  47255493 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 47255395  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| ||||||||||||||||||||||    
T  47255394 gagagatcaatctctcctccagagtaggtcattgttggaccgaa 47255351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 22079336 - 22079471
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    |||||||||||||| ||||||| ||||| ||||| ||| |||||||||| |||  |||||||||||||||||||||||||||||||| ||||| | | ||    
T  22079336 ggtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgatattggattggagag 22079435  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggacc 145  Q
    | |||| || || |||||||||||||||| ||||||    
T  22079436 atcaatttctcctccaaagtaggtcattgctggacc 22079471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25652096 - 25652195
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||| ||||||||||| ||||||| || | ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  25652096 ttgagaaattggtagaaattaagtgtgttatttgagagtttgttgaagctaatttcttgtaactctcttgtatctctttgtaaagaactctttgatagtg 25652195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 42298128 - 42297986
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  |||| || ||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  42298128 aaattggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 42298030  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    || ||| ||||||| || ||| |||||||||| |||||||||||    
T  42298029 aagagatcaatctctcctccagagtaggtcatggttggaccgaa 42297986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 6808487 - 6808610
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||||| ||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| | | ||| |||||||  || |    
T  6808487 tgttcttggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctcttcctc 6808586  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | ||||||| |||||||| |||||    
T  6808587 agagtaggttattgttggtccgaa 6808610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 8550940 - 8550798
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||| |||||||||| ||||| |||||||| |||||| ||||||||||||||||||||| |    
T  8550940 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttgt-aagaactcattgatagtggattg 8550842  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||   ||||||||||    
T  8550841 gagagatcaatctctcctccagagtaggtcaagtttggaccgaa 8550798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 49918365 - 49918506
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  49918365 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 49918463  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||||| |||||||  |||||||||||    
T  49918464 gagagatcaatctctcccccaaattaggtca-agttggaccgaa 49918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 4535629 - 4535541
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    ||||||||||| || ||||||||| ||| || ||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  4535629 ggtagaaattaagtttgttcttggagagcttattgaagtcaatttcttgtaacatttttgtatctctttgtaaagaactcattgatagt 4535541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 10925238 - 10925337
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgta--aagaactcattgatagtggat 103  Q
    |||||| |||||||||||  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||||  ||||| |||||||||||||||    
T  10925238 aaatggatagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggat 10925337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 16914330 - 16914234
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaa-tttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| ||||||||| ||||||||| |||  |||||||| ||| ||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  16914330 gaaatgggtaaaaattatgtttgttcttggagagcctgttgaagctaagtttcttctaacccttttgtatctctttgtaaagaactcattgatagtg 16914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 3156880 - 3157021
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  3156880 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 3156978  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  3156979 gagagatcaatctctcccccatattaggtca-agttggaccgaa 3157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 13547242 - 13547101
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| || ||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  13547242 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 13547144  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  13547143 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 13547101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 28220379 - 28220238
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  28220379 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 28220281  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  28220280 gagagatcaatctctcccccagattaggtca-agttggaccgaa 28220238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 41360929 - 41361059
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||  |||||||||| ||| | ||||||||||||||| |||||||| ||||||||||||      
T  41360929 aaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggatta 41361027  T
Q  106 aatagaacaatctc-cccccaaagtaggtcat 136  Q
    || ||| |||| || |||||| ||||||||||    
T  41361028 aagagatcaatatctcccccatagtaggtcat 41361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 2263106 - 2263016
Alignment:
Q  28 ttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatct 118  Q
    ||||||||||| ||||||||| |||||||||| ||| ||||| ||||| ||||||||||||| ||||||||||||| ||| ||| ||||||    
T  2263106 ttcttggtgagcttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatct 2263016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 32471510 - 32471572
Alignment:
Q  41 tgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  32471510 tgttgaagttaatttattgcaactcttttgtatctctttgtaagaaactcattgatagtggat 32471572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 50169363 - 50169246
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||  ||| |||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||| |    
T  50169363 aaatgggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctctttgt-aagtactcattgatagtggattg 50169265  T
Q  106 aatagaacaatctcccccc 124  Q
    || ||| ||||||| ||||    
T  50169264 aagagatcaatctctcccc 50169246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 197061 - 196965
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| ||||||||||| |  ||||||| ||||| ||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||    
T  197061 aaattggtagaaattagggttgttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatccctttgt-aagaactcattgatagtggat 196965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 19754510 - 19754606
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| |||   ||||||||||||||| |||||||||||||||||||||    
T  19754510 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgt-aagaactcattgatagtggat 19754606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 23555418 - 23555290
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||  |||||||||  ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  23555418 aaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttataactcatttgtatctctttgt-aagaactcattgatagtggattg 23555320  T
Q  106 aatagaacaatctccccccaaagtaggtca 135  Q
     | ||  ||||||| ||||| |||||||||    
T  23555319 gagagttcaatctctccccatagtaggtca 23555290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 31659253 - 31659349
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||| |||||||||||||    
T  31659253 aaatgggtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaacttattgatagtggat 31659349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 31925860 - 31925764
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  31925860 aaatgggtagaaattagggatgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 31925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 37168312 - 37168454
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||||||||||| |||||||||||||||||||||     
T  37168312 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggatt 37168410  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| || ||| |||||||||  |||||||||||    
T  37168411 ggagagatcaatctctcctccagagtaggtca-agttggaccgaa 37168454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 47115186 - 47115329
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||| ||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | ||||||||||||||||||| ||| ||||||||||||||     
T  47115186 aaattggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaaa-aacccattgatagtggatt 47115284  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| |||||||  | ||| ||||||||||||||||||||||    
T  47115285 ggagagatcaatctctgctccagagtaggtcattgttggaccgaa 47115329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 4552790 - 4552649
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||| ||| ||||| ||||||||| |||||||||| ||| | |||||||| |||||| ||||||||||||||| ||||| |    
T  4552790 aaatgggtagaaattaggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatccctttgt-aagaactcattgataatggattg 4552692  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| ||| || |||||||||  |||||||||||    
T  4552691 gagagatcaatctctccctcagagtaggtca-agttggaccgaa 4552649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 11348713 - 11348854
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||| | ||||||||||||||||||||| |    
T  11348713 aaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttct-aagaactcattgatagtggattg 11348811  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  11348812 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 11348854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 28223574 - 28223433
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||  || ||||  |||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  28223574 aaatgggtagaaattatggttgatctttctgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 28223476  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  28223475 gagagatcaatctctcccccatattaggtca-agttggaccgaa 28223433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 29136262 - 29136404
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||| ||||||| |||||||||||||| |||||| |    
T  29136262 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtatttctttgt-aagaactcattgatcgtggattg 29136360  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||   ||||||||||    
T  29136361 gagagatcaatctctcctccagagtaggtcaagtttggaccgaa 29136404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 44455175 - 44455292
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||  |||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| |    
T  44455175 aaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgtatctttttgt-aagaactcattgatagtggattg 44455273  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  44455274 gagagatcaatctctcccc 44455292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 45644508 - 45644411
Alignment:
Q  6 aaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||| ||||||||| || | |||||| ||||| ||||  ||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  45644508 aaatggatagaaattaagttttgttctttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctctttgt-aagaactcattgatagtggat 45644411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 46064933 - 46065062
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| || |||||| || ||||||| ||||| | ||||||| |||||||||| ||||| | ||||||||||||| ||||||||||| ||||||||| |    
T  46064933 aaatggataaaaattaggtttgttctttgtgagctcgttgaagctaatttcttgtaactcatgtgtatctctttgt-aagaactcattcatagtggattg 46065031  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
     | ||| ||||||| |||||| |||||||||    
T  46065032 gagagatcaatctctcccccagagtaggtca 46065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 193626 - 193722
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  |||||||  | || ||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||||||||||||    
T  193626 aaatgggtagaaattagggttgttctttattagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aataactcattgatagtggat 193722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 1833537 - 1833633
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| |||| | | |||||| ||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  1833537 aaatgggtagaaattagggttgttctttgtgaatctattgaagctaaattcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 1833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 9109539 - 9109479
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||    
T  9109539 ttgttgaagttaatttcttgtaacccttttgtatctctttgtaaagaacacgttgatagtg 9109479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13138133 - 13137999
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| |||||| ||||||||| ||  |||||| ||||| ||||||||| |||||||||| ||| | |||| |||||||||| |||||| |||||||||||    
T  13138133 ttgaaaaatggatagaaattaggtc-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgcatctctttgt-aagaacacattgatagtg 13138036  T
Q  101 gatagaatagaacaatctc-cccccaaagtaggtcat 136  Q
    ||| ||| ||| ||||||| |||| | ||||||||||    
T  13138035 gattgaagagagcaatctctcccctagagtaggtcat 13137999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 15820324 - 15820415
Alignment:
Q  8 atgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||| |||||| || ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||| | ||||||||||||||||||    
T  15820324 atgggtaaaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctcttt-ttaagaactcattgatagtg 15820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 34603591 - 34603733
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | |||| ||||||||||| |||||||||||||| ||||||     
T  34603591 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttttatctctttgt-aagaactcattgatggtggatt 34603689  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||| ||| ||||||| || ||| |||||||||  |||||||||||    
T  34603690 gaagagatcaatctctcctccagagtaggtca-agttggaccgaa 34603733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 37033226 - 37033083
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaa-ctcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| || |  ||||| |||||||||| |||||||||||||||||||||     
T  37033226 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaatccattttgcatctctttgt-aagaactcattgatagtggatt 37033128  T
Q  105 gaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | | |||  ||||||  | ||| |||||||||| |||||||||||    
T  37033127 ggagagattaatctcttctccatagtaggtcatggttggaccgaa 37033083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 834320 - 834179
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||| |||||||| ||||||||||||||||||| |    
T  834320 aaatggatagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattg 834222  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| | ||||| |||||| |||||||||  |||||||||||    
T  834221 gagagatctatctctcccccagagtaggtca-agttggaccgaa 834179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 7482384 - 7482290
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||| ||| | |||||||||||||||| ||||||||||||||||||    
T  7482384 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtg 7482290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 13549153 - 13549012
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||  ||||||| || ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  13549153 aaatgggtagaaattagggttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 13549055  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  13549054 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 13549012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 28265707 - 28265566
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| |||||||||||| |    
T  28265707 aaataggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattg 28265609  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  28265608 gagagatcaatctctcccccagattaggtca-agttggaccgaa 28265566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 928109 - 928033
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||| ||||||||| |||||||||| ||| |||||| ||||||||||||| |||||||| |||||||||    
T  928109 tgttctttgtgagcttgttgaagctaatttcttgtaacccttttggatctctttgtaaa-aactcattaatagtggat 928033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 3189365 - 3189441
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||  ||||||||| ||||||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  3189365 tgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgatagtggat 3189441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 3198182 - 3198258
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||  ||||||||| ||||||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  3198182 tgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgatagtggat 3198258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 3207021 - 3207097
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||  ||||||||| ||||||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  3207021 tgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgatagtggat 3207097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 3847274 - 3847178
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||||||||| ||| ||| || ||| ||| | |||||||| |||||| |||||||||||||||||||||    
T  3847274 aaatgggtagaaattagggttgttctttgtgagtttgtttaagctaaatttttgtaacccatttgtatccctttgt-aagaactcattgatagtggat 3847178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 19752701 - 19752797
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| | ||| ||||||||| |||||||||| |||   ||||||||||||||| |||||||||||||||| ||||    
T  19752701 aaatgggtagaaattagggttgttctttgcgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgt-aagaactcattgatagaggat 19752797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 12318677 - 12318585
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    ||||||||||||||||| || ||||| ||| ||| ||||||||| |||||||||| |||  |||||||| ||||  | |||||||||||||||    
T  12318677 gaaatgggtagaaattaggtttgttcatggagagcttgttgaagctaatttcttgtaaccattttgtatgtcttctttaagaactcattgata 12318585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 1050598 - 1050503
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||  |||||| |||||||||| | ||| || |||||| |||||||||| |||  |||||| |||||||||||| ||||| |||||||||    
T  1050598 gaaatgggtgaaaattaggtgtgttcttcgagagcttattgaagctaatttcttgtaacatttttgtgtctctttgtaaataactcgttgatagtg 1050503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 44650296 - 44650174
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| ||||||||||| | | |||||| ||| || |||||| |||||||||||||| || ||||| ||||||||| ||| ||| |||||||  |||     
T  44650296 tgttctttgtgagtttgttaacgctaatttattgtaaatcttttatatctctttgtaaataattcattaatagtggattgaagagatcaatctcttccca 44650197  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    ||||||||||| | ||||||||||    
T  44650196 aaagtaggtcaat-ttggaccgaa 44650174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 3460714 - 3460804
Alignment:
Q  10 gggtagaaattat-gtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    ||||||||||||  || ||||||| ||||| ||||||||| |||||| ||| ||| ||||||||| ||||||||||||||  |||||||||    
T  3460714 gggtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagt 3460804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 13938151 - 13938288
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaac-tcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||| || ||||||||| ||  ||||  ||  |||||||||| ||| | ||||||||||||||||||  ||||||||||||||||||    
T  13938151 gaaatgggtagaaattaggt-tgttcttggagaacttgtaaaatataatttcttgtaaccttttttgtatctctttgtaagaaactcattgatagtggat 13938249  T
Q  104 agaatagaacaatctccccccaaagtaggtcattgttgg 142  Q
     | | ||| |  ||||||||  | |||||||||||||||    
T  13938250 tggagagatctctctcccccagatgtaggtcattgttgg 13938288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 13316501 - 13316409
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  13316501 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg-gaagaactcattgatagtggat 13316409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 16455664 - 16455732
Alignment:
Q  34 gtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||| ||||||||| |||||||||| ||| | ||||||||||| ||| |||||||||||||||||||||    
T  16455664 gtgagcttgttgaagctaatttcttgtaacccatttgtatctctgtgt-aagaactcattgatagtggat 16455732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 20762691 - 20762783
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| |||||||||||||| || |||||||||||||||||||||    
T  20762691 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttcgt-aagaactcattgatagtggat 20762783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 37503707 - 37503593
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||| |||||| |  ||||||| ||||  ||||||||| |||||||||| |||    |||||||||||||||| ||||||||||||||||||| |    
T  37503707 aaatgggtaaaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacc---ttgtatctctttgtaa-gaactcattgatagtggattg 37503612  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  37503611 gagagatcaatctctcccc 37503593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 50167322 - 50167211
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaataga 111  Q
    |||||||||| |  |||| || ||||| ||||  ||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||||| | | |||    
T  50167322 gtagaaattagggttgttatttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggagaga 50167224  T
Q  112 acaatctcccccc 124  Q
     ||||||| ||||    
T  50167223 tcaatctctcccc 50167211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 41135839 - 41135926
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgata 97  Q
    ||||||||||||  | ||||||||  ||  || ||||||||||||||||| ||  ||||||||||| |||||||||||||| ||||||    
T  41135839 gggtagaaattagatttgttcttgaagaactttttgaagttaatttcttgtaaaccttttgtatctatttgtaaagaactcgttgata 41135926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 13659455 - 13659362
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggt 133  Q
    ||||||||| ||||||||||  || | ||| ||||||||||||| ||||||||||||||||||| | | ||| ||||||| |||||| |||||||    
T  13659455 ttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggt 13659362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 36683705 - 36683771
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgta 72  Q
    |||| ||||||||||| || | ||||| ||||||||||||||| |||||||||| ||||| ||||||    
T  36683705 aaataggtagaaattaggtttattctttgtgagtttgttgaagctaatttcttgtaactcatttgta 36683771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 28242382 - 28242461
Alignment:
Q  68 ttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccc-ccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||||||||| ||||||||| ||||||||| | | ||| ||||||| || ||| ||||||||||||||||||||||    
T  28242382 ttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 28242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 30476599 - 30476503
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| ||||||||||| |  |||||||  |||  ||||||||| |||||| ||| ||| | ||||||||||||||| ||||||||||||||| |||||    
T  30476599 aaataggtagaaattagggttgttctttatgaacttgttgaagataatttattgtaacccatttgtatctctttgt-aagaactcattgatactggat 30476503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 37282817 - 37282748
Alignment:
Q  34 gtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||| ||||||||| |||||| | | ||| |||||| ||||||||||||||||||||||  ||||||||    
T  37282817 gtgagcttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggat 37282748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 9987260 - 9987358
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||||||| |||||||||| ||||   ||||||||||||||||||||| | | || |||||||| || ||| |||||||||   ||||||||||    
T  9987260 taatttcttgcaac-cttttgtatcccttttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaa 9987358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 37560022 - 37559928
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaa-gttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||||||||||||    ||||||| ||||  |||||||| | |||||||||| ||| | ||||||||||||||| |||||||| |||||||||    
T  37560022 aaatgggtagaaattagagttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtg 37559928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 5459956 - 5460013
Alignment:
Q  41 tgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||||| |||||||||| |||  |||| ||| |||||||||||||||||||||||||    
T  5459956 tgttgaagctaatttcttgtaaca-ttttatatttctttgtaaagaactcattgatagt 5460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 16216451 - 16216419
Alignment:
Q  202 ttattctttagttcggttgtggttttgctttac 234  Q
    ||||||||||||||| |||||||||||||||||    
T  16216451 ttattctttagttcgattgtggttttgctttac 16216419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 30670114 - 30670205
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaac-tcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| || |||| |||| || |||||||||| |||||| ||| | | ||||||||||||||||||||  || ||||||||| |||||    
T  30670114 gtagaaattaggt-tgtttttggagaatttgttgaagctaattttttgtatcgtcttttgtatctctttgtaagaaagtcattgatactggat 30670205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 38746847 - 38746780
Alignment:
Q  31 ttggtgagtttgttgaagttaatttcttgcaactcttttgtat--ctctttgtaaagaactcattgat 96  Q
    |||| |||||| |||||  |||||||||| |||| ||||||||  ||||||||||||||||| |||||    
T  38746847 ttggagagtttattgaaactaatttcttgtaacttttttgtatatctctttgtaaagaactctttgat 38746780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 3303823 - 3303682
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||  |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |    
T  3303823 aaatgggtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 3303725  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    || ||| ||||||| |||||| |||||||||  |||||||||||    
T  3303724 aagagatcaatctctcccccacagtaggtca-agttggaccgaa 3303682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 1292616 - 1292520
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  1292616 aaatgggtagaaattaagtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 1292520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 11712120 - 11712000
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattg 138  Q
    ||||||||| |||||||||| ||| ||||| |||||||||||||| |||||||||||||||||| ||| ||| ||||||| ||| |||||||||||||||    
T  11712120 ttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattg 11712021  T
Q  139 ttggaccgaatcggataaaca 159  Q
    |||| || ||| || ||||||    
T  11712020 ttggtcctaattgggtaaaca 11712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32902332 - 32902191
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||| ||||||||||||||||||| ||||| ||| || | |||||||| |||||||||| |||| |||||||||||||| ||||||| ||||||||||||    
T  32902332 ttgataaatgggtagaaattatgtttgttcatggagactctgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtg 32902233  T
Q  101 gatagaatagaacaatctc-cccccaaagtaggtcattgttg 141  Q
     ||   | ||| ||||||| |||||  |||||||||||||||    
T  32902232 aatttgagagatcaatctctccccctgagtaggtcattgttg 32902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 7597649 - 7597781
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||||| ||| ||||||||| |||||||||  ||  |||||||||||||||||||||||  |||||||||||||| | | ||| ||||||| |||||    
T  7597649 tgttcttggagagcttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctccccc 7597748  T
Q  125 aaagtaggtcattgttggaccgaatcggataaa 157  Q
    | |||||||||||||| |||||||  |||||||    
T  7597749 atagtaggtcattgttagaccgaactggataaa 7597781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 18655415 - 18655556
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||      
T  18655415 aaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggatta 18655513  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || |||||||||||||  |||||||||||    
T  18655514 gagagatcaatctctcctccaaagtaggtca-agttggaccgaa 18655556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 27811293 - 27811434
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||| |||||||||||||| |    
T  27811293 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaacccattgatagtggattg 27811391  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    || ||| ||||||| |||||| | |||||||  |||||||||||    
T  27811392 aagagatcaatctctcccccagattaggtca-agttggaccgaa 27811434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 30143355 - 30143472
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  30143355 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 30143453  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  30143454 gagagatcaatctctcccc 30143472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 44353808 - 44353925
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  44353808 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacatttgtatctctttgt-aagaactcattgatagtggattg 44353906  T
Q  106 aatagaacaatctcccccc 124  Q
    || ||| ||||||| ||||    
T  44353907 aaaagatcaatctctcccc 44353925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 11384000 - 11384096
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||| |||||||| |||||    
T  11384000 aaatgggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaacccattgatactggat 11384096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 42435144 - 42435048
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  42435144 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 42435048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 4283539 - 4283654
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  |||| || ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  4283539 aaatgggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 4283637  T
Q  106 aatagaacaatctcccc 122  Q
     | ||| ||||||||||    
T  4283638 gagagatcaatctcccc 4283654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 19491852 - 19491722
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||  |||||||||| ||| | ||||||||||||||| |||||||| ||||||||||||      
T  19491852 aaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggatta 19491754  T
Q  106 aatagaacaatctc-cccccaaagtaggtcat 136  Q
    || ||| |||| || |||||| ||||||||||    
T  19491753 aagagatcaatatctcccccatagtaggtcat 19491722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 1345524 - 1345395
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| |  ||||||| |||||||| |||||| |||||||||| ||| | | |||||||||||| |||||||||||||||||||||| |    
T  1345524 aaatgtgtagaaattagggttgttctttgtgagtttattgaagctaatttcttgtaacccatatgtatctctttg-aaagaactcattgatagtggattg 1345426  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
    || ||  ||||||| |||||| |||||||||    
T  1345425 aagagttcaatctctcccccagagtaggtca 1345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 40328794 - 40328891
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||  |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  40328794 aaatgggtagaaattaggtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgt-aagaactcattgatagtggat 40328891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 15212801 - 15212942
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||| |    
T  15212801 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgataatggattg 15212899  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  15212900 gagagatcaatctctcccccagattaggtca-agttggaccgaa 15212942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 40221760 - 40221901
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||  |||||||||| ||| | ||||||||||||||| |||||||| |||||||||||| |    
T  40221760 aaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattg 40221858  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  40221859 gagagatcaatctctcccccagattaggtca-agttggaccgaa 40221901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 40321095 - 40321236
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||| | ||||| |||||||||||||||||||| ||| | || ||||||||||||||| ||||| |||||||||||| |    
T  40321095 aaatgggtagaaattagggttgttcattgtgagcttgttgaagttaatttcttgtaacccattagtatctctttgtaaa-aactctttgatagtggattg 40321193  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  40321194 gagagatcaatctctcccccagattaggtca-agttggaccgaa 40321236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 4162512 - 4162663
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||| ||| || ||||||| | ||  ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||| |||| |    
T  4162512 aaatgggtagaagttaggtttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatag-ggattg 4162609  T
Q  106 aatagaacaatctccccccaa-agtaggtcattgttggaccgaatcggataaaca 159  Q
     | | | ||||||| |||||| |||||||||  |||||||||||| || ||||||    
T  4162610 gagatatcaatctctccccaagagtaggtca-agttggaccgaattgggtaaaca 4162663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 18141836 - 18141952
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| || ||||||| ||||| ||||||||| |||||||||| ||| | |||||||| |||||||| |||||| |||||||||||| |    
T  18141836 aaatgggtagaaattaggt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcactttgtaa-gaactctttgatagtggattg 18141933  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  18141934 gagagatcaatctctcccc 18141952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 42498214 - 42498351
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| | | ||    
T  42498214 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttctttgt-aagaactcattgatagtggattggagag 42498312  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | ||||||| || ||| |||||||||   ||||||||||    
T  42498313 atcaatctctcctccagagtaggtcaagtttggaccgaa 42498351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 4731673 - 4731769
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  || |||| ||||| ||||||||  |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  4731673 aaatgggtagaaattagggttgctctttgtgagcttgttgaacctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 4731769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 43036438 - 43036534
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||  |||||||||| || || ||||||||||||||| |||||||||||||||||||||    
T  43036438 aaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaattcatttgtatctctttgt-aagaactcattgatagtggat 43036534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 34256655 - 34256564
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  34256655 ggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggat 34256564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 33352165 - 33352306
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||| |||||| |  ||||||| ||||  ||||||||  |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  33352165 aaatgggtaaaaattagggttgttctttgtgaacttgttgaacctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 33352263  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  33352264 gagagatcaatctctcccccagattaggtca-agttggaccgaa 33352306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 8965824 - 8965751
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||  ||||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||||||||||||||    
T  8965824 tgttctttatgagtttgttgaagttaatttcttataacccttttatatctctttgt-aagaactcattgatagtg 8965751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 10929814 - 10929876
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttt 68  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||| |||||||||| ||||||||    
T  10929814 aaatgggtagaaattatgtttgttctttgtgagcttgttgaagctaatttcttgtaactcttt 10929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 12702783 - 12702670
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||||||||| ||||| | | |    
T  12702783 gggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctctttgt-aagaactcattgatattggattggaga 12702685  T
Q  110 gaacaatctcccccc 124  Q
    || ||||||| ||||    
T  12702684 gatcaatctctcccc 12702670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 30291621 - 30291718
Alignment:
Q  6 aaatgggtagaaattatg-tgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| | | ||||||| ||||| ||||||||| |||||||||| ||||| |||||||| |||||| ||||| || ||||||||||||    
T  30291621 aaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcactttgt-aagaattctttgatagtggat 30291718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 34254485 - 34254388
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| |||||||||||| |  ||||||| ||||  ||||  |||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||    
T  34254485 gaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgt-aagaacttattgatagtggat 34254388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 9765760 - 9765856
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| |||   ||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  9765760 aaatgggtagaaattagggttgttctttgtgagcttggcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 9765856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 17982672 - 17982764
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  17982672 gggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttg-gaagaactcattgatagtggat 17982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 10240189 - 10240264
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgg 101  Q
    ||||||| ||||| ||||||||  |||||||||| |||  | ||| ||||||||||||||||||||||||||||||    
T  10240189 tgttctttgtgagcttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtgg 10240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 5689286 - 5689403
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |   || ||| ||||| ||||  ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  5689286 aaatgggtagaaattaaggtggtgctttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 5689384  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  5689385 gagagatcaatctctcccc 5689403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 41366767 - 41366627
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||||||||| ||||||| || || ||||| ||| |||||||||  |||   |||||||| |||||| ||||||||||| ||||||||| |    
T  41366767 aaatgggtagaaattatgtttgttctttgtaagcttgtttaagctaatttcttttaacctatttgtatccctttgt-aagaactcatttatagtggattg 41366669  T
Q  106 aatagaacaatctccccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| ||| | | |||||||  |||||||||||    
T  41366668 gagagatcaatctctccctagattaggtca-agttggaccgaa 41366627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 1746366 - 1746276
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  1746366 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg--aagaactcattgatagtggat 1746276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 6598987 - 6599083
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| | ||| ||||| ||| |||||||||| ||| | |||||||   ||||| |||||||||||||||||||||    
T  6598987 aaatgggtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtatacttttgt-aagaactcattgatagtggat 6599083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 6674440 - 6674536
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||| | ||| ||||| ||| |||||||||| ||| | |||||||   ||||| |||||||||||||||||||||    
T  6674440 aaatgggtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtatacttttgt-aagaactcattgatagtggat 6674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 29796455 - 29796331
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaa-ctcattgatagtggatagaatagaacaatctc-cccc 123  Q
    ||||||||| ||  ||||||||| | |||||||| |||  ||||||| || |||||||| || |||||| ||| ||||| | | ||| ||||||| ||||    
T  29796455 tgttcttggagaacttgttgaagctgatttcttgtaacatttttgtacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcccc 29796356  T
Q  124 caaagtaggtcattgttggaccgaa 148  Q
    ||| |||||||||||||||||||||    
T  29796355 caatgtaggtcattgttggaccgaa 29796331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 31218277 - 31218368
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  31218277 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg-gaagaactcattgatagtggat 31218368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 10930352 - 10930211
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  || |||| ||||| | ||||||| |||||||||| ||| | ||| ||||||||||| |||||| |||||||||||||| |    
T  10930352 aaatggatagaaattagggttgctctttgtgagctcgttgaagctaatttcttgtaacccatttatatctctttgt-aagaacacattgatagtggattg 10930254  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  10930253 gagagatcaatctctcccccagattaggtca-agttggaccgaa 10930211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 3231929 - 3231859
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgat 96  Q
    ||||||| ||||| ||||||||| |||||| ||  |||  |||||||||||||||||||||||| ||||||    
T  3231929 tgttcttcgtgagcttgttgaagctaattttttttaaccattttgtatctctttgtaaagaacttattgat 3231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 18106211 - 18106139
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||| | ||| ||||||||| |||||||||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  18106211 tgttctttgcgagcttgttgaagctaatttcttgtaactcatttgtatct-tttgtaa-gaactcattgatagtg 18106139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 19945509 - 19945416
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaact-cttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||  ||||||| ||||  ||||  ||| |||||||||| |||  |||||||||||||||| || |||||||||||||||||||    
T  19945509 gggtagaaattatggttgttctttgtgaacttgtcaaagctaatttcttgtaaccacttttgtatctctttggaa-gaactcattgatagtggat 19945416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 41365000 - 41364926
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttg 80  Q
    |||| ||||||||||| || ||||||| ||||||||||| ||| |||||||||| ||| | |||||||| |||||    
T  41365000 aaattggtagaaattaggtttgttctttgtgagtttgtttaagctaatttcttgtaacacatttgtatccctttg 41364926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 10015130 - 10015235
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctccccccaaagtaggtcattgt 139  Q
    ||||||||| |||||||||| ||||| ||||||||||||  | | ||||||||||||||||||| | | |||  |||||| | ||| |||||||||  ||    
T  10015130 ttgttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatctctctccatagtaggtca-agt 10015226  T
Q  140 tggaccgaa 148  Q
    |||||||||    
T  10015227 tggaccgaa 10015235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 44303874 - 44303966
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||  ||||||||||||||| | |||||||||||||||||||||    
T  44303874 gggtagaaattaaggttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctcttt-ttaagaactcattgatagtggat 44303966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 3073981 - 3073898
Alignment:
Q  51 aatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctccccccaaagtaggtca 135  Q
    ||||||||| |||  |||||||||||||||||| ||||||||||||| ||| | | | ||| ||||||| ||||| |||||||||    
T  3073981 aatttcttgtaacatttttgtatctctttgtaa-gaactcattgataatggcttggagagatcaatctctccccatagtaggtca 3073898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 8153806 - 8153865
Alignment:
Q  39 tttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||||||| ||| ||| || ||||||||||||| ||||||| |||||||||||||||||    
T  8153806 tttgttgaagctaaattcgtgtaactcttttgtatatctttgt-aagaactcattgatagt 8153865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 2627793 - 2627847
Alignment:
Q  50 taatttcttgcaactctttt-gtatctctt-tgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  2627793 taatttcttgcaactctttttgtatctcttgtgtaa-gaactcattgatagtggat 2627847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 4743291 - 4743226
Alignment:
Q  83 aagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    ||||||||||||||||||||| | | ||| ||||||| ||||||||||||||||  |||||||||||    
T  4743291 aagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaa 4743226  T

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Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 41267028 - 41267078
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| ||||||||||||| ||||| |||||||||  |||||||||    
T  41267028 taatttcttgtaactcttttgtatttctttctaaagaacttcttgatagtg 41267078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11137035 - 11137137
Alignment:
Q  1 ttgagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgt---aaagaactcattgata 97  Q
    ||||||||  ||||||||||| || ||| ||||  ||  ||||||||| |||||||||  |||  ||||||||||||||||   ||| ||||||||||||    
T  11137035 ttgagaaaatggtagaaattaagtatgtccttgaagaacttgttgaagctaatttcttataaccgttttgtatctctttgtaaaaaaaaactcattgata 11137134  T
Q  98 gtg 100  Q
    |||    
T  11137135 gtg 11137137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 2361125 - 2361029
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  2361125 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 2361029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 29608752 - 29608848
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  29608752 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 29608848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 22328524 - 22328401
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-ccccc 124  Q
    ||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||| || ||| ||||| |||||||||   | ||| ||||||| ||||     
T  22328524 tgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccct 22328425  T
Q  125 aaagtaggtcattgttggaccgaa 148  Q
    | ||||||||||||||||||||||    
T  22328424 agagtaggtcattgttggaccgaa 22328401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 36574649 - 36574574
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgg 101  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  36574649 tgttctttgtgagtttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgatagtgg 36574574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 5116625 - 5116713
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| || |||||||||  |||||||||||| |||||| ||| ||  ||||||||||||||||||||||||||||||||||||    
T  5116625 gtagaaattaggtttgttcttggatagtttgttgaagataatttattgtaaaccttttgtatctctttgtaaagaactcattgatagtg 5116713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 8359470 - 8359327
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    |||||||||||||||| |  | ||||| ||||| ||||| ||  |||||||||| ||| | |||||||||||||||||| |||||||||||||||||||     
T  8359470 aaatgggtagaaattagggtttttctttgtgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggatt 8359372  T
Q  105 gaatagaacaatctcccc-ccaaagtaggtcattgttggaccgaa 148  Q
    | | ||| ||||||| || ||| ||||||||||||||||||||||    
T  8359371 ggagagatcaatctctcctccagagtaggtcattgttggaccgaa 8359327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 22269988 - 22270129
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||| ||||||||||||| |    
T  22269988 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactgattgatagtggattg 22270086  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  22270087 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 22270129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 26417331 - 26417449
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| |||||||||||| |    
T  26417331 aaatgggtagaaattagggttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattg 26417429  T
Q  106 aatagaacaatctcccccca 125  Q
     | ||| ||||||| |||||    
T  26417430 gagagatcaatctctcccca 26417449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 27347832 - 27347973
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  27347832 aaatgggtagaaattaggattgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 27347930  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  27347931 cagagatcaatctctcccccagattaggtca-agttggaccgaa 27347973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 31733122 - 31732981
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||| ||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||| |    
T  31733122 aaatgggtagaaattagggttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatactggattg 31733024  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||||| |||||||  |||||||||||    
T  31733023 gagagatcaatctctcccccaaattaggtca-agttggaccgaa 31732981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 47674096 - 47673978
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |    
T  47674096 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 47673998  T
Q  106 aatagaacaatctcccccca 125  Q
     | ||| ||||||| |||||    
T  47673997 gagagatcaatctctcccca 47673978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 496136 - 496019
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |   |||||| ||||| ||||||||| |||||||||||||| | ||||||||||||| | ||||||||||||||||||||| |    
T  496136 aaatgggtagaaattagggtagttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatctctttat-aagaactcattgatagtggattg 496038  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  496037 gagagatcaatctctcccc 496019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 23565215 - 23565118
Alignment:
Q  6 aaatgggtagaaattatgtgt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| ||||||||||| || | |||||| ||||| ||||||||  |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  23565215 aaataggtagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggat 23565118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 48491594 - 48491711
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | |||||||||||||| |||||||||||||||||||||| |    
T  48491594 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg-aaagaactcattgatagtggattg 48491692  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  48491693 gagagatcaatctctcccc 48491711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 4510701 - 4510605
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| |||||||| |||||| |||||||||| ||| | ||||||||||||| | |||||||||||||||||||||    
T  4510701 aaatgggtagaaattaaggttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctctttat-aagaactcattgatagtggat 4510605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 4512543 - 4512447
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| |||||||| |||||| |||||||||| ||| | ||||||||||||| | |||||||||||||||||||||    
T  4512543 aaatgggtagaaattaaggttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctctttat-aagaactcattgatagtggat 4512447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 6431986 - 6432082
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| ||||||||||||    
T  6431986 aaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggat 6432082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 27073860 - 27073925
Alignment:
Q  35 tgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  27073860 tgagtttattgaagttaatttcttgtaactcttttgtatctctttgtaaagaactcgttgacagtg 27073925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 27204453 - 27204388
Alignment:
Q  35 tgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  27204453 tgagtttattgaagttaatttcttgtaactcttttgtatctctttgtaaagaactcgttgacagtg 27204388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 48599487 - 48599391
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||  |||| ||||||||||||||||    
T  48599487 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg-gaagagctcattgatagtggat 48599391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 47676289 - 47676194
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgga 102  Q
    |||||||||||||||| |  ||||||| |||| |||||||||| |||||||||| ||| | ||||||||||||||| ||||||||| ||||||||||    
T  47676289 aaatgggtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcaatgatagtgga 47676194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 30024885 - 30024744
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| |||||||||||| |    
T  30024885 aaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattg 30024787  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||| | |||||| |||||||||  |||||||||||    
T  30024786 gagagatcaatcactcccccagagtaggtca-agttggaccgaa 30024744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 34310869 - 34310727
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| | ||||||||| ||||| ||||||||||||||||||||| |    
T  34310869 aaatgggtagaaattagggttgttctttgtgaaattgttgaagctaatttcttgtaacacatttgtatctttttgt-aagaactcattgatagtggattg 34310771  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||   ||||||||||    
T  34310770 gagagatcaatctctcctccagagtaggtcaagtttggaccgaa 34310727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 23555060 - 23555197
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatag 110  Q
    ||||||||||| |  ||||||| ||||  ||||||||| |||||||||| ||| |||||||| |||||||| ||||||||||||||||||||| | | ||    
T  23555060 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgtacctctttgt-aagaactcattgatagtggattggagag 23555158  T
Q  111 aacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    | ||||||| || ||| |||||||||   ||||||||||    
T  23555159 atcaatctctcctccagagtaggtcaagtttggaccgaa 23555197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 31518810 - 31518910
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| || ||||||| ||||| || |||||| || ||||||| ||||| ||||||||||||||| ||||||||||||| |||||| ||    
T  31518810 aaataggtagaaattaggtttgttctttgtgagcttattgaagctagtttcttgtaactcatttgtatctctttgt-aagaactcattgacagtggagag 31518908  T
Q  106 aa 107  Q
    ||    
T  31518909 aa 31518910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 43363622 - 43363531
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctc--tttgtaaagaactcattgatagtg 100  Q
    ||||||||||| || ||||||||| ||| ||||||||  |||||| ||| ||||||||||||||||  |||||||| |||||||||||||||    
T  43363622 ggtagaaattaggtttgttcttggagagcttgttgaaactaatttattgtaactcttttgtatctctatttgtaaataactcattgatagtg 43363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 2390297 - 2390438
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| || |||||||  ||||||||| |    
T  2390297 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aataactcatatatagtggattg 2390395  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| || ||| |||||||||  |||||||||||    
T  2390396 gagagatcaatctctcctccagagtaggtca-agttggaccgaa 2390438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 3904726 - 3904628
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||||||| |||   | ||| ||||||| ||| || ||||||||||||||||||||||    
T  3904726 taatttcttgtaacacttttgcatctctttgtaaagaactcattgatagt-gatcagagagatcaatctctccctcagagtaggtcattgttggaccgaa 3904628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 32358179 - 32358066
Alignment:
Q  34 gtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtagg 132  Q
    ||||| ||||||||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| || ||| ||||||    
T  32358179 gtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtagg 32358081  T
Q  133 tcattgttggaccgaa 148  Q
    |||  |||||||||||    
T  32358080 tca-agttggaccgaa 32358066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 38671375 - 38671234
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||| ||||| ||| |||||| ||| ||| | |||||||| |||||| ||||||||||||||||||||| |    
T  38671375 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcactttgt-aagaactcattgatagtggattg 38671277  T
Q  106 aatagaacaatct-ccccccaaagtaggtcattgttggaccgaa 148  Q
    || |||  |||||  |||||||| |||||||  |||||||||||    
T  38671276 aagagataaatctatcccccaaaataggtca-agttggaccgaa 38671234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 41649163 - 41649023
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| || ||||||| ||||| ||||| | | |||||||||| ||| | |||||||| |||||||| ||||||||||||||||||| |    
T  41649163 aaattggtagaaattaggtttgttctttgtgagcttgttta-gctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattg 41649066  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||||| |||||||  |||||||||||    
T  41649065 gagagatcaatctctcccccaaattaggtca-agttggaccgaa 41649023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 1113672 - 1113789
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||| ||||||||| |  ||||||| ||||| ||||||||| |||||||||  ||| | ||||||||||||||| ||||||||||||||||| ||| |    
T  1113672 aaatggatagaaattagggttgttctttgtgagcttgttgaagctaatttcttataacccatttgtatctctttgt-aagaactcattgatagtagattg 1113770  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  1113771 gagagatcaatctctcccc 1113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 3259010 - 3259139
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||||||||||| || |  ||||||| ||||| ||||| ||| |||||| ||| ||||| |||||||||||||||||| ||| |||||||||||||| |    
T  3259010 aaatgggtagaaactagggttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctctttgtaaa-aacccattgatagtggattg 3259108  T
Q  106 aatagaacaatctc-cccccaaagtaggtca 135  Q
     | ||| ||||||| || ||| |||||||||    
T  3259109 gagagatcaatctctcctccagagtaggtca 3259139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 4586176 - 4586293
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| ||||  ||||||||| |||||| ||| ||| | ||| ||||||||||| ||||||||||||||||||||| |    
T  4586176 aaatgggtagaaattagggttgttctttgtgaacttgttgaagctaattttttgtaacccatttttatctctttgt-aagaactcattgatagtggattg 4586274  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  4586275 gagagatcaatctctcccc 4586293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 8153357 - 8153474
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    ||||| |||||||||| |  ||||||| ||||| ||||  ||| |||||||||| ||||| ||||||||||||||| || |||||||||||||||||| |    
T  8153357 aaatgagtagaaattagggttgttctttgtgagattgtcaaagctaatttcttgtaactcatttgtatctctttgt-aataactcattgatagtggattg 8153455  T
Q  106 aatagaacaatctcccccc 124  Q
     | ||| ||||||| ||||    
T  8153456 gagagatcaatctctcccc 8153474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 19502200 - 19502289
Alignment:
Q  13 tagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||| |  |||| || ||||| ||||  ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  19502200 tagaaattaaggttgttttttgtgagcttgtcaaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggat 19502289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 2759330 - 2759254
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||  ||||||||| |||||||||| ||||| ||| ||||||||||| |||||||||||||||||||||    
T  2759330 tgttctttgtgaacttgttgaagctaatttcttgtaactcatttatatctctttgt-aagaactcattgatagtggat 2759254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 4253662 - 4253585
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||| ||||| ||||||||| ||||||| || ||| ||||| |||||||||| |||||||||||||||| |||||    
T  4253662 tgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataatggat 4253585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 4508859 - 4508763
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||| |||||||||| |  ||||||| ||||| || |||||| |||||||||| ||| | ||||||||||||||| ||||||||||||| |||||||    
T  4508859 aaatgagtagaaattagggttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgagagtggat 4508763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 18126659 - 18126755
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||| |||||||||| |  ||||||| ||||  ||||| ||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  18126659 aaatgtgtagaaattagggttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 18126755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 31105546 - 31105450
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||  | | ||||| ||||| ||||||||| |||||||||| ||| | ||||||||| ||||| |||||||||||||| ||||||    
T  31105546 aaatgggtagaaattagattttttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctttttgt-aagaactcattgatggtggat 31105450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 35853933 - 35854025
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  35853933 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggat 35854025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 6360080 - 6360013
Alignment:
Q  31 ttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagt 99  Q
    |||||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||    
T  6360080 ttggtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagt 6360013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 14069982 - 14069867
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| | | |    
T  14069982 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggaga 14069884  T
Q  110 gaacaatctccccccaa 126  Q
    || ||||||| ||||||    
T  14069883 gatcaatctctccccaa 14069867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 14380010 - 14379897
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaata 109  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| | | |    
T  14380010 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggaga 14379912  T
Q  110 gaacaatctcccccc 124  Q
    || ||||||| ||||    
T  14379911 gatcaatctctcccc 14379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 26639340 - 26639402
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtat 73  Q
    ||||||||||| || ||||||||| ||||||||||| |||||||||||| ||| |||||||||    
T  26639340 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgtat 26639402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 36146561 - 36146465
Alignment:
Q  6 aaatgggtagaaattat-gtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||||||  || |||| || ||||| ||||||||| |||||||| | ||| | ||||||||||||||||| |||||||||||||||||||    
T  36146561 aaatgggtagaaattagagtttgttatttgtgagcttgttgaagctaatttct-gtaacccatttgtatctctttgtaa-gaactcattgatagtggat 36146465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 43864262 - 43864355
Alignment:
Q  9 tgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||||| |  ||||||| ||||  ||||||||| ||||||| || ||| | |||||||||||||||||| |||| |||||||||||||    
T  43864262 tgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctctttgtaaa-aactaattgatagtggat 43864355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 25615868 - 25615964
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| || ||||||  ||| | ||||| ||| |||||||||| ||| | ||||||||  ||||| |||||||||||||||||||||    
T  25615868 aaatgggtagaaattaggtttgttctatgtgcgcttgtttaagctaatttcttgtaacccatttgtatcattttgt-aagaactcattgatagtggat 25615964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 39731427 - 39731480
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  39731427 taatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggat 39731480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 31518918 - 31519070
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| || ||||||  ||||| || |||||| || || |||| ||||| ||||||||||||||| ||||||||||||| ||||||| |    
T  31518918 aaataggtagaaattaggtttgttctctgtgagcttattgaagctagtt-cttgtaactcatttgtatctctttgt-aagaactcattgacagtggattg 31519015  T
Q  106 aatagaacaa--tctccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
     | ||| |||  |||| ||||| |||||||||  |||||||||||  |||||||||    
T  31519016 gagagatcaatctctctccccagagtaggtca-agttggaccgaactggataaaca 31519070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 12098012 - 12097941
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctct 77  Q
    |||||||||||||||| |  ||||| | ||||| |||||||||||||||||||| ||| | |||||||||||    
T  12098012 aaatgggtagaaattagggttgttcattgtgagcttgttgaagttaatttcttgtaacccatttgtatctct 12097941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 18396353 - 18396475
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctcccccca 125  Q
    ||||||||| ||||||||||||  || ||| ||| |||  |||||||||||||| ||||||| |||||||||| |||| | | ||| ||||||| || ||    
T  18396353 tgttcttggagagtttgttgaacctatttttttgtaaca-ttttgtatctctttataaagaattcattgatagaggattggagagatcaatctctcctca 18396451  T
Q  126 a-agtaggtcattgttggaccgaa 148  Q
    | ||||||||| || |||||||||    
T  18396452 agagtaggtcaatggtggaccgaa 18396475  T

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Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 41317587 - 41317446
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||| ||||||||||| |  ||||||| ||||| ||||  ||| |||||||||| ||  | |||||||| |||||||| ||||||||||||||||||| |    
T  41317587 aaattggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatccctttgtaa-gaactcattgatagtggattg 41317489  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  41317488 gagagatcaatctctcccccagattaggtca-agttggaccgaa 41317446  T

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Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 4178833 - 4178884
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  4178833 taatttcttgtaacccttttgtatctctttg--aagaactcattgatagtggat 4178884  T

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Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 24525594 - 24525536
Alignment:
Q  67 tttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctccccccaa 126  Q
    ||||||||||||||||| ||||||||||||||||||| | | ||| ||||||| ||||||    
T  24525594 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctccccaa 24525536  T

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Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 29991112 - 29991210
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||| ||| ||||||||||||||| | || |||||||||||||||||| | | ||| ||||||| || ||| |||||||||   ||||||||||    
T  29991112 taatttcttgtaacccttttgtatctctttct-aataactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 29991210  T

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Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 48489446 - 48489587
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatag 105  Q
    |||||||||||||||| |  ||||||| |  |  ||||||||| |||||||||| ||| | ||||||||||||||  || |||||||| ||||||||| |    
T  48489446 aaatgggtagaaattagggttgttctttgaaaacttgttgaagctaatttcttgtaacccatttgtatctctttg-caataactcattcatagtggattg 48489544  T
Q  106 aatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
     | ||| ||||||| |||||| | |||||||  |||||||||||    
T  48489545 gagagatcaatctctcccccagattaggtca-agttggaccgaa 48489587  T

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Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 25767110 - 25767017
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| | |||||||||||||| | |||||||||||||||||||||    
T  25767110 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccccttttgtatctcttt-tgaagaactcattgatagtggat 25767017  T

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Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1360142 - 1360097
Alignment:
Q  190 tctttatctggtttattctttagttcggttgtggttttgctttaca 235  Q
    ||||||||| |||| |||||| ||||| ||||||||||||||||||    
T  1360142 tctttatcttgtttcttcttttgttcgattgtggttttgctttaca 1360097  T

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Target: scaffold0002 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 490468 - 490380
Alignment:
Q  12 gtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||| || ||||||||| ||| ||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  490468 gtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtg 490380  T

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Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 434552 - 434644
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  434552 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggat 434644  T

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Target: scaffold0466 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 7342 - 7438
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  7342 aaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggat 7438  T

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Target: scaffold0053 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 25088 - 25162
Alignment:
Q  26 tgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    ||||||| | ||||||||||||| |||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  25088 tgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtg 25162  T

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Target: scaffold0176 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 18156 - 18061
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||| ||||||||||| |  ||||| | ||||| ||||||||| |||||||||| ||||| |||||||||||||||||  ||||||||||||||||||    
T  18156 aaattggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa--aactcattgatagtggat 18061  T

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Target: scaffold0014 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 80436 - 80343
Alignment:
Q  6 aaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 100  Q
    |||||||||||||||| |  ||||||| ||||| ||||||||| |||||||||||||| | ||||||||| ||||| |||||||||| |||||||    
T  80436 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatctttttgt-aagaactcatagatagtg 80343  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 114621 - 114713
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  114621 gggtagaaattaaggttgttctttgtgaacttgtcaaagctaatttcttgtaacgcttttgtatctctttgt-aagaactcattgatagtggat 114713  T

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Target: scaffold0286 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 11577 - 11668
Alignment:
Q  11 ggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    ||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  11577 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggat 11668  T

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Target: scaffold0197 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 1549 - 1397
Alignment:
Q  5 gaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggata 104  Q
    ||||| |||| |||||| || |||||| |||||| ||| ||||||| |||| ||||||| ||||||| |||||   ||||||||||||| |||||  | |    
T  1549 gaaattggtaaaaattaggtttgttctgggtgagcttggtgaagttgattttttgcaacccttttgtttctctgcataaagaactcattaatagtcaaga 1450  T
Q  105 gaatagaacaatctccccccaaagtaggtcattgttggaccgaatcggataaaca 159  Q
    | | ||| |  |||| ||| | ||||||||||||||||||| ||| || ||||||    
T  1449 ggagagatc--tctctcccaagagtaggtcattgttggaccaaattgggtaaaca 1397  T

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Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 20560 - 20427
Alignment:
Q  14 agaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaac 113  Q
    |||||||| || |||| || ||||  ||||||||| |||||||||| ||| | ||||||||||||||| |||||||| |||||| ||||| | | ||| |    
T  20560 agaaattaggtttgttttttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatattggattggagagatc 20462  T
Q  114 aatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||| |||||| | |||||||  |||||||||||    
T  20461 aatctctcccccagattaggtca-agttggaccgaa 20427  T

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Target: scaffold1519 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 935 - 1026
Alignment:
Q  10 gggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||||| |  ||||||| ||||  ||||  ||| |||||||||| ||| ||||||||||||||||  || ||||||||||||||||||    
T  935 gggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg--aacaactcattgatagtggat 1026  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 149216 - 149123
Alignment:
Q  40 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggt 133  Q
    ||||||||| ||||||||||  || | ||| ||||||||||||| ||||||||||||||||||| | | ||| ||||||| |||||| |||||||    
T  149216 ttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggt 149123  T

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Target: scaffold0491 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 11318 - 11218
Alignment:
Q  3 gagaaatgggtagaaattatgtgtgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtgga 102  Q
    |||||| |||||||||||| |  ||||||| ||||  ||||  ||  |||||||||| ||| |||||||||||||||   |||||||| |||||||||||    
T  11318 gagaaaagggtagaaattagggttgttctttgtgaacttgtaaaatctaatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtgga 11219  T
Q  103 t 103  Q
    |    
T  11218 t 11218  T

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Target: scaffold0491; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 8845 - 8792
Alignment:
Q  50 taatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 103  Q
    |||||||||| ||| |||||||||||||||   |||||||| ||||||||||||    
T  8845 taatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggat 8792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 10564 - 10645
Alignment:
Q  66 ttttgtatctctttgtaaagaactcattgatagtggatagaatagaacaatctc-cccccaaagtaggtcattgttggaccgaa 148  Q
    |||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||| || ||| |||||||||  |||||||||||    
T  10564 ttttgtatctctttgtaa-gaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaa 10645  T

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