View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12624_high_8 (Length: 374)
Name: NF12624_high_8
Description: NF12624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12624_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 16 - 359
Target Start/End: Original strand, 32686969 - 32687308
Alignment:
| Q |
16 |
gaacaacagtgctgataagttagcaaaccttggttatgatgatgtcttcaaggtgattgattggctgcagcttccctcttagctgaaactcattttagat |
115 |
Q |
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| T |
32686969 |
gaacaacagtgctgataagttagcaaaccttggttatgatgatgtcttcaaggtgattgattggctgcagcttccctcttagctgaaactcattttagat |
32687068 |
T |
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| Q |
116 |
gatccctcccttagctagttagctattctttttctttgcattatttatcnnnnnnnncatatgggaaaatcccagttcaagaggaaaaataaataacatg |
215 |
Q |
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| T |
32687069 |
gatccctcccttagctagttagctattatttttctttgcattatttatcaaaaaaaacatatgggaaaatcccagttcaagaggaaaaataaataacatg |
32687168 |
T |
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| Q |
216 |
attgccaaatagtcaatgagcatgtactcaaggattgaatttgaataatagacaagatctccatactcaggattc-tgattaattgcaagtagtaagtga |
314 |
Q |
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| T |
32687169 |
attgccaaatagtcaatgagcatgtactcaaggattgaatttgaataatagacaagatctccatactcaggattcttgattaattgcaagtagtaagtga |
32687268 |
T |
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| Q |
315 |
taaataggcttgaagttgttaaactcgttatttgcatgttccaat |
359 |
Q |
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| T |
32687269 |
taaataggcttgaagttgt-----tcgttatttgcatgttccaat |
32687308 |
T |
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