View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12626_low_5 (Length: 295)
Name: NF12626_low_5
Description: NF12626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12626_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 5 - 279
Target Start/End: Original strand, 8765870 - 8766146
Alignment:
| Q |
5 |
tgctcgttcactgtaaacgtgatatgacataaataatgtgataagtggg-ggcgtatcttaccgtatcgtatgataatttattttagc-ttttaggtcta |
102 |
Q |
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| T |
8765870 |
tgctctttcactataaacgtgatatgacataaataatgtgataagtgggaggcgtatcttaccgtatcgtatgataatttattttagccttttaggtctg |
8765969 |
T |
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| Q |
103 |
tcattacacttggataaccctctagatatgaaaacctaactcctaaacatgtggtaatgtgttaagacttaagagacatctatcactcgagctagttttg |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8765970 |
tcattacacttggataaccctctagatatgaaaacctaactcctaaacatgtggtaatgtgttaagacttaagagacatctatcactcgagctagttttg |
8766069 |
T |
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| Q |
203 |
tgaaactaaattatactaaatattcaaattctaaaattgatgtgatcatggtttgtattgcaatctccgttattttt |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8766070 |
tgaaactaaattatactaaatattcaaattctaaaattgatgtgatcatggtttgtattgcaatctccgttattttt |
8766146 |
T |
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