View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12626_low_7 (Length: 257)
Name: NF12626_low_7
Description: NF12626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12626_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 7463496 - 7463723
Alignment:
| Q |
18 |
ggttgttacatgtgccagcctaggttgtcgctttttaaattaatttcactatattgttgctaattttgttataggnnnnnnnttgtttcgtattcgtatt |
117 |
Q |
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| T |
7463496 |
ggttgttacatgtgccagcctaggttgtcactttttaaattaatttcactatattgttgctaattttgtaataggaaaaaaattgtttcgtattcgtatt |
7463595 |
T |
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| Q |
118 |
tttgttaaataatgttgttttcacatgagcaaagctccttgcaaattttcacgtgcatatactcgtatgaaacttcatttaaatacactaatga---gtt |
214 |
Q |
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| T |
7463596 |
tttgttaaataatgttgttttcacatgggcaaagctccttgcaaattttcacgtgcatatactcgtatgaaacttcatttaaatacactaatgaattgtt |
7463695 |
T |
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| Q |
215 |
aaatcaactaaactaaactgttttcaca |
242 |
Q |
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| T |
7463696 |
aaatcaactaaactaaactgttttcaca |
7463723 |
T |
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