View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12626_low_8 (Length: 250)
Name: NF12626_low_8
Description: NF12626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12626_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 25499536 - 25499766
Alignment:
| Q |
5 |
gagaagcaaagggctgtcagtgtctgacaaacacatctaaacacacatgcacttcaacttggtacaaaaatgtggaacctgaaatctgacccacactctc |
104 |
Q |
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| T |
25499536 |
gagaagcaaagagctgtcagtgtctgacaaacacatctaaacacacatgcacttcaacttggtacaaaaatgtggaacctgaaatctgacccacactctc |
25499635 |
T |
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| Q |
105 |
tttggtttcattcctgaaaaatacagaaaataggaatggttaatataaattatgaagctcagctgagaaactaattcaaaaagagtatggctattgacag |
204 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25499636 |
tttggttgcattcctgaaaaatacagaaaataggaatggttaatataaagtatgaagctcagctgagaaactaattcaaaaagagtatggctattgacag |
25499735 |
T |
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| Q |
205 |
aaggagaatctaatcagagtttataagtttt |
235 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
25499736 |
aaggagaatctaatcagagtttataagtttt |
25499766 |
T |
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