View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12628_high_3 (Length: 295)
Name: NF12628_high_3
Description: NF12628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12628_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 25 - 277
Target Start/End: Original strand, 29006441 - 29006693
Alignment:
| Q |
25 |
tagcaaaggcatgaatcaagatttagagtcctgacgaaggggatgggagttgaacctactccctttaaggaccatgaatcaactatttatcaattaaacc |
124 |
Q |
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| T |
29006441 |
tagcaatggcatgaatcaagatttagagtcctgacgaaggggatgggagttgaatctactccctttaaggaccatgaatcaactatttatcaattaaacc |
29006540 |
T |
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| Q |
125 |
tacctatatgttacatgtatacccattaaaaatgatttggagaagttcatttcattaggtgaaacaattttttcttcaaaaattggatattctctagcac |
224 |
Q |
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| T |
29006541 |
aacctatatgttacatgtttacccattaaaaatgatttggagaatttcatttcattaggtgaaacaattttttcttcaaaaattggatattctctagcac |
29006640 |
T |
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| Q |
225 |
agcagcaaacactaatctctaaattgagtagaatgacaattgactgcaaaata |
277 |
Q |
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| T |
29006641 |
agcagcaaacactaatctctaaattgagtagaatgacaattgactgcaaaata |
29006693 |
T |
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