View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12629_low_1 (Length: 379)

Name: NF12629_low_1
Description: NF12629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12629_low_1
NF12629_low_1
[»] chr7 (39 HSPs)
chr7 (1-193)||(41514876-41515067)
chr7 (77-193)||(41533250-41533366)
chr7 (266-363)||(41514706-41514803)
chr7 (267-317)||(41533125-41533175)
chr7 (1-76)||(41516389-41516465)
chr7 (1-78)||(33459588-33459666)
chr7 (1-75)||(48671074-48671149)
chr7 (4-73)||(38408322-38408392)
chr7 (1-73)||(1970811-1970884)
chr7 (2-78)||(33458303-33458380)
chr7 (1-73)||(40926564-40926637)
chr7 (4-73)||(14107830-14107900)
chr7 (4-73)||(14417787-14417857)
chr7 (1-74)||(25154981-25155055)
chr7 (1-75)||(45089468-45089542)
chr7 (1-73)||(19278351-19278424)
chr7 (1-73)||(22060461-22060534)
chr7 (4-80)||(38406009-38406086)
chr7 (1-73)||(43935183-43935256)
chr7 (1-78)||(13446703-13446781)
chr7 (1-54)||(17288265-17288319)
chr7 (1-54)||(19848879-19848933)
chr7 (1-78)||(28325066-28325143)
chr7 (1-78)||(33341291-33341369)
chr7 (1-73)||(18802434-18802507)
chr7 (1-73)||(19279657-19279730)
chr7 (1-54)||(35480225-35480278)
chr7 (1-73)||(43006383-43006456)
chr7 (1-73)||(43007694-43007767)
chr7 (1-86)||(22746365-22746451)
chr7 (1-54)||(28326435-28326488)
chr7 (1-58)||(38002559-38002617)
chr7 (1-54)||(45721811-45721865)
chr7 (1-54)||(46457087-46457141)
chr7 (1-78)||(46674979-46675057)
chr7 (1-54)||(47163170-47163224)
chr7 (1-73)||(25153656-25153729)
chr7 (1-73)||(43936185-43936258)
chr7 (1-73)||(46458758-46458831)
[»] chr4 (38 HSPs)
chr4 (1-76)||(1273478-1273553)
chr4 (1-78)||(46796071-46796149)
chr4 (1-73)||(31711090-31711163)
chr4 (1-73)||(29663641-29663713)
chr4 (1-76)||(30683072-30683148)
chr4 (1-76)||(38553924-38554000)
chr4 (1-72)||(40146668-40146740)
chr4 (1-78)||(86796-86874)
chr4 (1-78)||(15787547-15787625)
chr4 (1-66)||(28103531-28103597)
chr4 (4-73)||(29686254-29686324)
chr4 (4-73)||(35789638-35789708)
chr4 (1-78)||(37560344-37560422)
chr4 (1-78)||(10403462-10403539)
chr4 (1-73)||(11113740-11113813)
chr4 (1-73)||(21104355-21104428)
chr4 (1-73)||(30670992-30671065)
chr4 (1-53)||(47667197-47667249)
chr4 (2-77)||(52881976-52882052)
chr4 (4-78)||(39590934-39591009)
chr4 (1-58)||(26791470-26791527)
chr4 (1-73)||(30682718-30682791)
chr4 (1-73)||(33376216-33376289)
chr4 (1-73)||(33377409-33377482)
chr4 (1-73)||(43894103-43894176)
chr4 (1-53)||(48206178-48206231)
chr4 (1-76)||(26393172-26393248)
chr4 (1-73)||(27410727-27410799)
chr4 (1-63)||(40143662-40143725)
chr4 (1-54)||(937143-937197)
chr4 (4-76)||(526767-526840)
chr4 (1-73)||(2309842-2309915)
chr4 (1-73)||(10403278-10403350)
chr4 (1-53)||(11094544-11094597)
chr4 (1-73)||(11115025-11115098)
chr4 (1-73)||(27408761-27408834)
chr4 (1-73)||(37558996-37559069)
chr4 (1-73)||(55953897-55953970)
[»] chr5 (34 HSPs)
chr5 (1-78)||(12936147-12936225)
chr5 (1-73)||(1273087-1273160)
chr5 (1-73)||(12933749-12933822)
chr5 (1-73)||(19523981-19524054)
chr5 (1-78)||(1273385-1273463)
chr5 (1-78)||(12950305-12950383)
chr5 (1-73)||(12947910-12947983)
chr5 (1-73)||(19827185-19827258)
chr5 (1-77)||(18695692-18695769)
chr5 (1-78)||(224635-224713)
chr5 (1-78)||(1663180-1663258)
chr5 (1-78)||(5975749-5975827)
chr5 (1-78)||(19525333-19525411)
chr5 (1-78)||(26403300-26403378)
chr5 (1-74)||(26404255-26404329)
chr5 (1-73)||(18677974-18678047)
chr5 (1-53)||(42980754-42980807)
chr5 (7-78)||(41905168-41905240)
chr5 (23-78)||(33362635-33362690)
chr5 (1-78)||(5384391-5384469)
chr5 (4-73)||(6629729-6629799)
chr5 (1-54)||(7345435-7345489)
chr5 (1-78)||(10085890-10085968)
chr5 (1-54)||(15613522-15613576)
chr5 (27-73)||(24805289-24805335)
chr5 (1-58)||(32521967-32522025)
chr5 (1-54)||(42979465-42979519)
chr5 (1-73)||(5382940-5383013)
chr5 (9-73)||(5977128-5977193)
chr5 (4-72)||(40058017-40058086)
chr5 (25-73)||(10084625-10084673)
chr5 (1-76)||(15509190-15509266)
chr5 (1-48)||(15615005-15615053)
chr5 (1-60)||(42511711-42511771)
[»] chr1 (26 HSPs)
chr1 (1-78)||(14071248-14071326)
chr1 (1-78)||(49139794-49139872)
chr1 (4-73)||(52741486-52741556)
chr1 (1-77)||(9633769-9633846)
chr1 (1-73)||(13929293-13929366)
chr1 (1-71)||(13930720-13930791)
chr1 (1-78)||(25787209-25787287)
chr1 (1-73)||(3978042-3978115)
chr1 (1-73)||(25785966-25786039)
chr1 (1-63)||(3979358-3979421)
chr1 (1-71)||(34653435-34653506)
chr1 (4-78)||(44979428-44979503)
chr1 (1-54)||(50679866-50679920)
chr1 (1-75)||(2973053-2973128)
chr1 (1-54)||(13641274-13641328)
chr1 (1-54)||(26056192-26056246)
chr1 (1-78)||(42244497-42244575)
chr1 (1-78)||(48935155-48935233)
chr1 (1-54)||(51424268-51424322)
chr1 (1-73)||(14312773-14312846)
chr1 (1-77)||(29264866-29264942)
chr1 (1-73)||(47411493-47411566)
chr1 (1-80)||(2236804-2236884)
chr1 (1-76)||(34531658-34531734)
chr1 (1-76)||(40135382-40135458)
chr1 (1-48)||(42248350-42248398)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-77)||(48501-48578)
[»] chr6 (14 HSPs)
chr6 (1-77)||(27438784-27438861)
chr6 (1-79)||(2138682-2138761)
chr6 (1-78)||(5311272-5311350)
chr6 (1-54)||(33807706-33807760)
chr6 (1-73)||(8411084-8411157)
chr6 (1-73)||(8447219-8447292)
chr6 (1-73)||(8456023-8456096)
chr6 (1-73)||(33802062-33802135)
chr6 (1-73)||(34084179-34084250)
chr6 (1-54)||(19368563-19368617)
chr6 (1-78)||(22299948-22300026)
chr6 (1-54)||(26581970-26582024)
chr6 (1-78)||(31738356-31738434)
chr6 (1-53)||(31740317-31740370)
[»] chr3 (34 HSPs)
chr3 (1-73)||(49122047-49122120)
chr3 (1-78)||(8372661-8372739)
chr3 (1-73)||(26798951-26799024)
chr3 (1-73)||(54654011-54654084)
chr3 (1-76)||(39133012-39133088)
chr3 (1-53)||(47766996-47767048)
chr3 (1-66)||(43101899-43101965)
chr3 (1-78)||(51825666-51825744)
chr3 (1-73)||(10987698-10987771)
chr3 (1-73)||(47806816-47806889)
chr3 (1-73)||(47808151-47808224)
chr3 (1-78)||(19621998-19622076)
chr3 (1-78)||(41386123-41386201)
chr3 (1-78)||(41387478-41387556)
chr3 (1-54)||(47855383-47855437)
chr3 (1-73)||(17350147-17350220)
chr3 (1-73)||(42632704-42632777)
chr3 (1-73)||(51824124-51824197)
chr3 (1-52)||(10986671-10986723)
chr3 (3-73)||(53808316-53808387)
chr3 (1-54)||(19579339-19579393)
chr3 (1-54)||(35633244-35633298)
chr3 (1-54)||(39287487-39287541)
chr3 (1-78)||(40502260-40502338)
chr3 (1-78)||(42633931-42634009)
chr3 (4-78)||(47765432-47765506)
chr3 (1-54)||(48034026-48034080)
chr3 (1-54)||(51401396-51401450)
chr3 (1-73)||(8371218-8371291)
chr3 (1-53)||(11219448-11219501)
chr3 (2-58)||(46446382-46446439)
chr3 (1-54)||(53347044-53347097)
chr3 (24-73)||(53809562-53809611)
chr3 (1-48)||(29536737-29536785)
[»] chr8 (26 HSPs)
chr8 (4-78)||(10053792-10053867)
chr8 (1-73)||(29739688-29739761)
chr8 (1-78)||(37472396-37472474)
chr8 (1-66)||(4810169-4810234)
chr8 (24-73)||(8395022-8395071)
chr8 (1-73)||(16363857-16363930)
chr8 (1-73)||(36070176-36070249)
chr8 (1-73)||(37276288-37276361)
chr8 (1-73)||(37323346-37323419)
chr8 (1-73)||(41867961-41868034)
chr8 (1-73)||(43275748-43275821)
chr8 (1-54)||(21267181-21267235)
chr8 (1-54)||(24068347-24068401)
chr8 (1-54)||(24069491-24069545)
chr8 (1-73)||(31623904-31623977)
chr8 (1-53)||(37274905-37274958)
chr8 (1-73)||(37474081-37474154)
chr8 (1-73)||(38591052-38591125)
chr8 (1-75)||(37324733-37324808)
chr8 (4-54)||(24703226-24703276)
chr8 (1-78)||(38589814-38589891)
chr8 (1-53)||(7486095-7486148)
chr8 (1-53)||(19914951-19915004)
chr8 (1-73)||(36940078-36940151)
chr8 (1-73)||(43386747-43386820)
chr8 (1-72)||(14820192-14820264)
[»] chr2 (22 HSPs)
chr2 (1-73)||(23177671-23177745)
chr2 (1-73)||(23588928-23589002)
chr2 (1-73)||(7038377-7038450)
chr2 (1-77)||(10368430-10368507)
chr2 (1-73)||(41795997-41796070)
chr2 (4-73)||(4701535-4701605)
chr2 (1-58)||(10477355-10477413)
chr2 (1-78)||(11575500-11575578)
chr2 (1-78)||(12958410-12958487)
chr2 (1-78)||(37869085-37869163)
chr2 (1-73)||(37867754-37867827)
chr2 (1-73)||(42029003-42029076)
chr2 (1-54)||(6706943-6706997)
chr2 (1-54)||(12854149-12854203)
chr2 (1-58)||(15268394-15268452)
chr2 (4-73)||(21010542-21010612)
chr2 (1-54)||(1625021-1625074)
chr2 (1-73)||(4628880-4628953)
chr2 (1-73)||(12959750-12959823)
chr2 (1-73)||(35799510-35799583)
chr2 (1-73)||(42027191-42027264)
chr2 (1-48)||(2583591-2583639)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-73)||(12908-12981)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-71)||(77226-77297)
[»] scaffold0046 (2 HSPs)
scaffold0046 (1-78)||(23399-23477)
scaffold0046 (1-78)||(24860-24938)
[»] scaffold0024 (1 HSPs)
scaffold0024 (8-73)||(73038-73104)
[»] scaffold1974 (1 HSPs)
scaffold1974 (1-73)||(673-746)
[»] scaffold1878 (1 HSPs)
scaffold1878 (1-73)||(528-601)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-73)||(9523-9596)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-73)||(39946-40019)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-44)||(54618-54662)


Alignment Details
Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 41515067 - 41514876
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaaccttgtctttttcatatcattcttta 100  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||    
T  41515067 aaattgaaacactttatagttaggaaccaaaattaaaaccaaaaataaattaagggac-aaatgatatattaagccttgtctttttcatttcattcttta 41514969  T
Q  101 actatcgatctagctagcaagtagtagcaaccaagcagagtttctatgcaaaatttgaggtgtattttattgtaaatttaaaggttcaacatg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  41514968 actatcgatctagctagcaagtagtagcaaccaagcagagtttcgatgcaaaattggaggtgtattttattgtaaatttaaaggttcaacatg 41514876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 41533366 - 41533250
Alignment:
Q  77 ttgtctttttcatatcattctttaactatcgatctagctagcaagtagtagcaaccaagcagagtttctatgcaaaatttgaggtgtattttattgtaaa 176  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41533366 ttgtctttttcatttcattctttaactatcgatctagctagcaagtagtagcaaccaagcagagtttctatgcaaaattggaggtgtattttattgtaaa 41533267  T
Q  177 tttaaaggttcaacatg 193  Q
    ||||||| |||||||||    
T  41533266 tttaaagcttcaacatg 41533250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 266 - 363
Target Start/End: Complemental strand, 41514803 - 41514706
Alignment:
Q  266 acactttctagtctcatgctattgtcacgtgggcattttttgctgacatggtgccacataagaaaataattaatttgtcatttacatatggttatatt 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41514803 acactttctagtctcatgctattgtcacgtgggcattttttgctgacatggtgccacataagaaaataattaatttgtcatttacatatggttatatt 41514706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 41533175 - 41533125
Alignment:
Q  267 cactttctagtctcatgctattgtcacgtgggcattttttgctgacatggt 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41533175 cactttctagtctcatgctattgtcacgtgggcattttttgctgacatggt 41533125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41516389 - 41516465
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||| |||||||||||||||| || |||||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  41516389 aaattaagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagagaccaaatgatatattaaacc 41516465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33459588 - 33459666
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| ||| | ||||||||||| |||||| ||||    
T  33459588 aaattgagacactttatagttagaggaccaaaatgaaaaccaaaaataagttatgggactaaatgatgtattaagcctt 33459666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48671149 - 48671074
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaac 75  Q
    ||||||||| |||||||||||||| || |||| | |||||||||||||||||||||||| ||||||| ||||||||    
T  48671149 aaattgagatactttatagttaagagatcaaattaaaaaccaaaaataaattaagagaccaaatgatgtattaaac 48671074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 38408322 - 38408392
Alignment:
Q  4 ttgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||| ||||||||| | |||| ||||||||||||||| ||| ||||||||||||||    
T  38408322 ttgagacactttatagttagaggaccaaagtgaaaatcaaaaataaattaagggaccaaatgatatattaa 38408392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1970884 - 1970811
Alignment:
Q  1 aaattgagacactttatagttaagga-ccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||| | ||||| ||||||    
T  1970884 aaattgaaacactttatagttaaggaaccaaagtaaaaaccaaaaataaattaagagaccagatgatgtattaa 1970811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 33458380 - 33458303
Alignment:
Q  2 aattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||  ||| ||||||| |||||| ||||    
T  33458380 aattgagacactttatagttaaaggaccaaaatgaaaaccaaaaataagttaaaggaccaaatgatgtattaagcctt 33458303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40926564 - 40926637
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||||||||||| ||||||    
T  40926564 aaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaa 40926637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 14107900 - 14107830
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| ||||  ||| ||||||| ||||||    
T  14107900 ttgagacactttatagttaagggaccaaaatgaaaaccaaaaataagttaaatgaccaaatgatgtattaa 14107830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 14417857 - 14417787
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| ||||  ||| ||||||| ||||||    
T  14417857 ttgagacactttatagttaagggaccaaaatgaaaaccaaaaataagttaaatgaccaaatgatgtattaa 14417787  T

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Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25154981 - 25155055
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaa 74  Q
    ||||||||||||||||||||||| ||| |||| | |||||||||||||| ||||| ||| ||||||| |||||||    
T  25154981 aaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaaa 25155055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45089542 - 45089468
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaac 75  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||| ||||| ||| |||  || ||||||||    
T  45089542 aaattgagacactttatagtagaggaccaaaatgaaaaccaaaaataagttaagggacgaaagcatttattaaac 45089468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19278424 - 19278351
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||    
T  19278424 aaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 19278351  T

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Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22060534 - 22060461
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||| ||||| ||| ||||||||||||||    
T  22060534 aaattgagacactttatagttagaggaccaaattaaaaacacaaaataagttaagtgaccaaatgatatattaa 22060461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 38406086 - 38406009
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaaccttgt 80  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||  ||| |||| || |||||| ||||||    
T  38406086 ttgagacactttatagttaggggaccaaaatgaaaaccaaaaataaattaaaggaccaaataatgtattaagccttgt 38406009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43935256 - 43935183
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||| ||| |||  |||||||||    
T  43935256 aaattgagacactttatagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaagcatatattaa 43935183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13446703 - 13446781
Alignment:
Q  1 aaattgagacactttatagtt-aaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||| ||||||| ||| |||||| | |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  13446703 aaattgagacactatatagttgaagaaccaaagtgaaaaccaaaaataagttaagtgaccaaatgatgtattaagcctt 13446781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17288265 - 17288319
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||| |||||    
T  17288265 aaattgagacactttatagttaggggaccaaaattaaaacaaaaaataagttaag 17288319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19848879 - 19848933
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| |||||    
T  19848879 aaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaag 19848933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28325143 - 28325066
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||| |||||| ||||| || ||||||||||||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  28325143 aaattgagatactttaaagttaggggaccaaaattaaaaccaaaaataagttaag-gaccaaatgatgtattaagcctt 28325066  T

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Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33341369 - 33341291
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||| |||||||||| | ||||||||| ||| |||||||||| ||||||||| |||| || |||||| ||||    
T  33341369 aaattgagacaatttatagttatgagaccaaaataaaatccaaaaataagttaagagaccaaatcatgtattaagcctt 33341291  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18802434 - 18802507
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  ||| |||||| ||||| |||||||| ||||| ||| ||||||| ||||||    
T  18802434 aaattgagacactttatagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgatgtattaa 18802507  T

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Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19279657 - 19279730
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | |||||||||||||| ||||| ||| ||| ||| ||||||    
T  19279657 aaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaacgatgtattaa 19279730  T

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Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35480278 - 35480225
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||| |||||    
T  35480278 aaattgagacactttatagttagggaccaaaatgaaatccgaaaataagttaag 35480225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43006456 - 43006383
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||| ||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  43006456 aaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 43006383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43007694 - 43007767
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| ||||||||| | |||| ||||||||| || |  ||| ||||||||||||||    
T  43007694 aaattgagacactttatagttagaggaccaaattgaaaatcaaaaataagttgaaggaccaaatgatatattaa 43007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22746365 - 22746451
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaaccttgtcttttt 86  Q
    ||||||||||||||||||||||  |||| ||| | ||||| |||||||| ||||  ||| |||| || ||||||||||| |||||||    
T  22746365 aaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaaaggaccaaataatgtattaaaccttttcttttt 22746451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28326435 - 28326488
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||| | | ||||||||| ||||||||||||||||||||    
T  28326435 aaattgagacactttatagtcaggagaccaaaat-aaaaccaaaaataaattaag 28326488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38002559 - 38002617
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagac 58  Q
    ||||||||||||||||||||||| |||||||||| ||| |  ||||||| |||||||||    
T  38002559 aaattgagacactttatagttaagggaccaaaatgaaatctgaaaataagttaagagac 38002617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45721811 - 45721865
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  |||||||||| ||||| |||||||| |||||    
T  45721811 aaattgagacactttatagttaggggaccaaaatgaaaactaaaaataagttaag 45721865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46457141 - 46457087
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| ||| |||| | |||||||||||||| |||||    
T  46457141 aaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaag 46457087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46674979 - 46675057
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||| |||||||||||||||||| ||| |||| | |||||||||||||| ||||| ||  ||||||| |||||| ||||    
T  46674979 aaatcgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaagggatcaaatgatgtattaagcctt 46675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47163224 - 47163170
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||| || ||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  47163224 aaattaaggcactttatagttagaggaccaaaataaaatccaaaaataaattaag 47163170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25153729 - 25153656
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | |||| | ||||||| ||||| ||| ||||||| ||||||    
T  25153729 aaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaagggaccaaatgatgtattaa 25153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43936185 - 43936258
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||| ||| |||||||||||| ||||||||||| ||| |||||||||| ||||| ||| |||  |||||||||    
T  43936185 aaattaagaaactttatagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaactatatattaa 43936258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46458758 - 46458831
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||| | |||| ||||||| | ||||| ||| ||| ||| ||||||    
T  46458758 aaattgagacactttatagttaagggaccaaattgaaaatcaaaaattacttaagggaccaaacgatgtattaa 46458831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1273478 - 1273553
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    |||||||||||||||||||||| ||  | ||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  1273478 aaattgagacactttatagttaggggaccaaattaaaaccaaaaataagttaagggaccaaatgatatattaaacc 1273553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46796071 - 46796149
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||| ||| ||| |||||| ||||    
T  46796071 aaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaacgatgtattaagcctt 46796149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31711163 - 31711090
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||    
T  31711163 aaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 31711090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29663713 - 29663641
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| ||| |||||| |||||||||||||||||||| || |||| ||| ||||||    
T  29663713 aaattgagacaatttatagttagggatcaaaatgaaaaccaaaaataaattaagggattaaaggatgtattaa 29663641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30683072 - 30683148
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||| |||  || |||||||||    
T  30683072 aaattgagacactttatagttaagggaccaaaatgaaaatcaaaaataaattaagggaccaaagcatgtattaaacc 30683148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38554000 - 38553924
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    |||||||||||||||||||||| | ||||||||| |||||  ||||||||||||| ||| ||||||| |||||||||    
T  38554000 aaattgagacactttatagttagaagaccaaaataaaaacagaaaataaattaagggaccaaatgatgtattaaacc 38553924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40146668 - 40146740
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatatta 72  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||  ||||| ||| ||||||| |||||    
T  40146668 aaattgagacactttatagttaaaggaccaaaataaaaaccaaaaatacgttaagggaccaaatgatgtatta 40146740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 86874 - 86796
Alignment:
Q  1 aaattgagacactttatagttaagga-ccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||  ||||||||||| ||| ||||| | ||||| |||||||||||||||||||||||||| |||||| ||||    
T  86874 aaattgagatgctttatagttagggaaccaaagtgaaaactaaaaataaattaagagactaaatgatgtattaagcctt 86796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15787547 - 15787625
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||||| ||||| ||||||||||||||  |  |||||||||||||| ||||    
T  15787547 aaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaattaaggaaaaaaatgatatattaagcctt 15787625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28103531 - 28103597
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgat 66  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| |||||||    
T  28103531 aaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 28103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 29686324 - 29686254
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||| ||||||||||||| |||||| | |||||||||||||| ||||| ||||||||||| ||||||    
T  29686324 ttgagacaatttatagttaagggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaa 29686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 35789638 - 35789708
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||| |||||||||||||| || |||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  35789638 ttgaaacactttatagttacgggaccaaagtgaaaaccaaaaataagttaagagactaaatgatgtattaa 35789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37560344 - 37560422
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  37560344 aaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 37560422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10403462 - 10403539
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||| ||||||||||||||   | |||| | |||||||||||||| ||||||||||||||||| |||||| ||||    
T  10403462 aaattgatacactttatagttagaaatcaaagtgaaaaccaaaaataagttaagagactaaatgatgtattaagcctt 10403539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11113813 - 11113740
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||| ||||| |||||| ||||||| ||||| ||| ||||||| ||||||    
T  11113813 aaattgagacactttatagttaagggactaaaatgaaaaccgaaaataagttaagtgaccaaatgatgtattaa 11113740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21104355 - 21104428
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||||| ||||| |||||||| |||||  || ||||||||||||||    
T  21104355 aaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaaccaaatgatatattaa 21104428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30671065 - 30670992
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||||| ||| || ||||||| ||||||||| |||  |||||||||    
T  30671065 aaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaagagaccaaaacatatattaa 30670992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47667249 - 47667197
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaa 53  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  47667249 aaattgagacactttatagttagagaccaaaataaaaaccaaaaataagttaa 47667197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 52881976 - 52882052
Alignment:
Q  2 aattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    ||||||||||||||||||| | || |||||||| ||| |||||||||||||||| ||| |||  |||||||||||||    
T  52881976 aattgagacactttatagtcaggggaccaaaataaaatccaaaaataaattaagggaccaaaacatatattaaacct 52882052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 39591009 - 39590934
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  39591009 ttgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 39590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26791470 - 26791527
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagac 58  Q
    |||||||||||||||||| ||| |||| ||||| ||| |||||||||| |||||||||    
T  26791470 aaattgagacactttataattagggactaaaataaaatccaaaaataagttaagagac 26791527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30682791 - 30682718
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||| ||||||||||||||||| |||||||||| ||||| |||||||| ||||| ||| |||| || ||||||    
T  30682791 aaattaagacactttatagttaagggaccaaaatgaaaactaaaaataagttaagggaccaaattatgtattaa 30682718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33376289 - 33376216
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaatt-aaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| ||| ||  | ||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  33376289 aaattgagacactttataattagggcactaaattgaaaaccaaaaataagttaagagaccaaatgatgtattaa 33376216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33377409 - 33377482
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | |||| ||||||||| ||||| ||| ||||||| ||||||    
T  33377409 aaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaa 33377482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43894176 - 43894103
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| || |||||| | |||||||||||||| ||||| ||||| ||||| ||||||    
T  43894176 aaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggactatatgatgtattaa 43894103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48206231 - 48206178
Alignment:
Q  1 aaattgagacactttatagttaagga-ccaaaattaaaaccaaaaataaattaa 53  Q
    ||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||    
T  48206231 aaattgaaacactttataattaaggaaccaaaataaaaaccaaaaataaattaa 48206178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26393172 - 26393248
Alignment:
Q  1 aaattgagacactttatagtt-aaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||||||||||||||||||| ||||| |||||| ||||  |||||||| ||||| ||| |||| || |||||||||    
T  26393172 aaattgagacactttatagttaaaggatcaaaataaaaataaaaaataagttaagggaccaaatcatgtattaaacc 26393248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27410727 - 27410799
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| |||  ||| | ||||| |||| ||| ||||||||| ||||||| ||||||    
T  27410727 aaattgagacactttatagttagggattaaattgaaaactaaaattaagttaagagaccaaatgatgtattaa 27410799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40143725 - 40143662
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaat 63  Q
    ||||||||||||||||||||||  |||| ||||| ||||| |||||||| ||||||||| ||||    
T  40143725 aaattgagacactttatagttaggggactaaaatgaaaactaaaaataagttaagagaccaaat 40143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 937143 - 937197
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  |||||||||| ||| || |||||||||||||    
T  937143 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataaattaag 937197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 526767 - 526840
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||||||||||||||||| || |||||||| ||| || ||||||||||||| ||| |||  || |||||||||    
T  526767 ttgagacactttatagttaggggaccaaaatgaaatccgaaaataaattaagggaccaaaacatgtattaaacc 526840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2309915 - 2309842
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||| |||||||||| ||| | ||||||||| ||| |||||||||||||||| ||| |||  |||||||||    
T  2309915 aaattgaaacactttataattatgagaccaaaatgaaatccaaaaataaattaagggaccaaaacatatattaa 2309842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10403350 - 10403278
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||| ||||||||||||||||  |||||||| | |||||||||||||| || || ||||||||||| ||||||    
T  10403350 aaattaagacactttatagttaggggaccaaagtaaaaaccaaaaataagtt-agggactaaatgatgtattaa 10403278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11094597 - 11094544
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaa 53  Q
    ||||| |||||||||||||||| | ||||||| | |||||||||||||||||||    
T  11094597 aaattaagacactttatagttaggagaccaaagtaaaaaccaaaaataaattaa 11094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11115025 - 11115098
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||| ||||||||||||  |||||||||| |||||  ||||||| ||||| ||| ||||||| ||||||    
T  11115025 aaattgagatactttatagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaatgatgtattaa 11115098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27408834 - 27408761
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| | ||||||| | |||||  ||||||| ||||| ||| ||||||| ||||||    
T  27408834 aaattgagacactttatagttagatgaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaa 27408761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37559069 - 37558996
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| || |||||| | |||||||||||||| |||||  || ||||||| ||||||    
T  37559069 aaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaaggaaccaaatgatgtattaa 37558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 55953897 - 55953970
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| || |||||| | |||| ||||||||| ||||| ||  ||||||||||||||    
T  55953897 aaattgagacattttatagttatgggaccaaattgaaaatcaaaaataagttaagggatcaaatgatatattaa 55953970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12936147 - 12936225
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||||| |||||| ||||    
T  12936147 aaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggactaaatgatgtattaagcctt 12936225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1273160 - 1273087
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||| ||||||    
T  1273160 aaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaa 1273087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12933822 - 12933749
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||||||||||    
T  12933822 aaattgagacactttatagttaggggatcaaaatgaaaaccaaaaataagttaagggactaaatgatatattaa 12933749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19524054 - 19523981
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||| ||||| ||| ||||||||||||||    
T  19524054 aaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatatattaa 19523981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1273385 - 1273463
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| ||| |||||||||| ||||    
T  1273385 aaattgagacactttataattaagggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaagcctt 1273463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12950305 - 12950383
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||||| ||||||| |||||| ||||| ||||||||||| |||||| ||||    
T  12950305 aaattgagacactttatagttaggggaccaaaatgaaaaccataaataagttaagggactaaatgatgtattaagcctt 12950383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12947983 - 12947910
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||||| |||| ||||||||| ||||| ||||||||||||||||||    
T  12947983 aaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagggactaaatgatatattaa 12947910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19827185 - 19827258
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| ||| || |||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  19827185 aaattgagacactttataattatgggaccaaattgaaaaccaaaaataagttaagagactaaatgatgtattaa 19827258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18695692 - 18695769
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||| ||| |||  || ||||||||||    
T  18695692 aaattgagacactttatagttaagggaataaaatgaaaaccaaaaataaattaagggaccaaagcatgtattaaacct 18695769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 224635 - 224713
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||||| |||||  ||||||| ||||| ||| | ||||| |||||||||||    
T  224635 aaattgagacactttatagttaggggaccaaaatgaaaacataaaataagttaagggaccagatgatgtattaaacctt 224713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1663258 - 1663180
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||| ||||||||||||||||| ||| |||| | ||| |||||||||| ||||| ||||||||||| |||||| ||||    
T  1663258 aaattaagacactttatagttaatggatcaaagtgaaatccaaaaataagttaagggactaaatgatgtattaagcctt 1663180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5975827 - 5975749
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||| ||| || |||||||||||||  |||||||| ||||  ||| ||||||| |||||||||||    
T  5975827 aaattgagacactttataattaggggaccaaaattaaaataaaaaataagttaaaggaccaaatgatgtattaaacctt 5975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19525333 - 19525411
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||| ||||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  19525333 aaatggagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 19525411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26403378 - 26403300
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||||||| |||||||| | |||| ||||||||| ||||  ||||| ||||| |||||| ||||    
T  26403378 aaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaaaggactatatgatgtattaagcctt 26403300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26404255 - 26404329
Alignment:
Q  1 aaattgagacactttatagtt-aaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaa 74  Q
    ||||||||||||||||||||| |||||||||| | |||| || |||||||||||| ||  ||||||| |||||||    
T  26404255 aaattgagacactttatagttaaaggaccaaattaaaaatcataaataaattaagggatcaaatgatgtattaaa 26404329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18678047 - 18677974
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  18678047 aaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaa 18677974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42980754 - 42980807
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaa 53  Q
    |||||||||||||||||||||| ||||||||||| ||| | |||||||||||||    
T  42980754 aaattgagacactttatagttataggaccaaaatgaaatctaaaaataaattaa 42980807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 41905240 - 41905168
Alignment:
Q  7 agacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||| |||||||||| || |||||||| |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  41905240 agacattttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 33362635 - 33362690
Alignment:
Q  23 aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||| | ||||| |||||||| ||||| ||| |||||||||||||||||||    
T  33362635 aggaccaaattaaaaacaaaaaataagttaagggaccaaatgatatattaaacctt 33362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5384391 - 5384469
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||||||  ||| |||| | |||| |||||||||||||||  || ||||||| |||||| ||||    
T  5384391 aaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaaggaaccaaatgatgtattaagcctt 5384469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 6629799 - 6629729
Alignment:
Q  4 ttgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||  |||||||| | ||||||| |||||| ||||| ||| ||||||| ||||||    
T  6629799 ttgagacactttatagttaggggaccaaagtgaaaaccacaaataagttaagggaccaaatgatgtattaa 6629729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7345435 - 7345489
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| ||||||||||| |||  ||||||||| |||||    
T  7345435 aaattgagacactttatagttagaggaccaaaatgaaattcaaaaataagttaag 7345489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10085890 - 10085968
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||| |||||||| ||||||| ||||||| | |||  ||||||||| ||||| ||| ||||||| |||||||||||    
T  10085890 aaattgaaacactttaaagttaagagaccaaagtgaaattcaaaaataagttaagggaccaaatgatgtattaaacctt 10085968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15613576 - 15613522
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| |||||    
T  15613576 aaattgagacactttatagttagaagaccaaaatgaaatccaaaaataagttaag 15613522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 24805335 - 24805289
Alignment:
Q  27 ccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  24805335 ccaaaataaaaaccaaaaataagttaagagaccaaatgatgtattaa 24805289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32521967 - 32522025
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagac 58  Q
    ||||||||||||| |||||||| || |||||||| ||| || |||||||||||||||||    
T  32521967 aaattgagacactctatagttaggggaccaaaatgaaatccgaaaataaattaagagac 32522025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42979519 - 42979465
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||| |||||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  42979519 aaattgaaacactttatagttagaggaccaaaatgaaatccaaaaataaactaag 42979465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5383013 - 5382940
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| ||| | |||||||   |||||||||||||| ||||| ||| ||||||| ||||||    
T  5383013 aaattgagacactttataattaggagaccaaatagaaaaccaaaaataagttaagggaccaaatgatgtattaa 5382940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 5977128 - 5977193
Alignment:
Q  9 acactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||| || ||| |||||||||| |||||||||||||| ||| |||| || ||||||    
T  5977128 acactttatagttaggggacccaaattaaaacaaaaaataaattaagggaccaaataatgtattaa 5977193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 40058086 - 40058017
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatatta 72  Q
    |||| |||||| |||||||||| | |||||| |||||||||||||| ||||||||  ||| |||||||||    
T  40058086 ttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaataagttaagagatcaaacgatatatta 40058017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 10084673 - 10084625
Alignment:
Q  25 gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||| |||||||||||||||||||| ||  ||||||| ||||||    
T  10084673 gaccaaaatgaaaaccaaaaataaattaagggaacaaatgatgtattaa 10084625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15509266 - 15509190
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||||||||||||||||||||  |||||||||| ||| || ||||||| ||||| ||| |||  || |||||||||    
T  15509266 aaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggaccaaagcatgtattaaacc 15509190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15615005 - 15615053
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataa 48  Q
    ||||||||||||||||||||||  |||||||||| ||| ||||||||||    
T  15615005 aaattgagacactttatagttagcggaccaaaatgaaatccaaaaataa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42511711 - 42511771
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagacta 60  Q
    ||||||||||||||||||||||| |||||||| | ||||   ||||||||||||| |||||    
T  42511711 aaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggacta 42511771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14071248 - 14071326
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||| ||||||| |||||| ||||    
T  14071248 aaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaagcctt 14071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 49139872 - 49139794
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||||  |||||||||||||| ||||| ||| ||||||| |||||||||||    
T  49139872 aaattgagacactttatagttatgggaccaaaacgaaaaccaaaaataagttaagggaccaaatgatgtattaaacctt 49139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 52741556 - 52741486
Alignment:
Q  4 ttgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| ||| ||||||||||||||    
T  52741556 ttgagacactttatagttagaggaccaaaataaaaacgaaaaataagttaagggaccaaatgatatattaa 52741486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9633846 - 9633769
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  ||| |||| || ||||||||||    
T  9633846 aaattgagacactttatagttaagggaccaaaatgaaaaccaaaaataagttaaaggaccaaattatgtattaaacct 9633769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13929366 - 13929293
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  13929366 aaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 13929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13930720 - 13930791
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatatt 71  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||| ||||| ||| ||||||| ||||    
T  13930720 aaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtatt 13930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25787209 - 25787287
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  25787209 aaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 25787287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3978115 - 3978042
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||||||| ||||| ||| ||||||| ||||||    
T  3978115 aaattgagacactttatagttaaaggaccaaaatgaaattcaaaaataagttaagggaccaaatgatgtattaa 3978042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25786039 - 25785966
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  25786039 aaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 25785966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3979358 - 3979421
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaat 63  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| ||||    
T  3979358 aaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaat 3979421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34653506 - 34653435
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatatt 71  Q
    ||||||||||||||||||||||| |||||||| | |||||| ||||||| ||||| ||| ||||||| ||||    
T  34653506 aaattgagacactttatagttaagggaccaaagtgaaaaccgaaaataagttaagggaccaaatgatgtatt 34653435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 44979503 - 44979428
Alignment:
Q  4 ttgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||||| ||||||| | ||||| |||||||| ||||| || |||||||| |||||| ||||    
T  44979503 ttgagacactttatagttaagagaccaaagtgaaaacaaaaaataagttaagggattaaatgatgtattaagcctt 44979428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50679866 - 50679920
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  50679866 aaattgagacactttatagttaagggaccaaaataaaaactaaaaataagttaag 50679920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2973053 - 2973128
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaac 75  Q
    |||||||||||||||||| |||| |||| ||||| ||||| |||||||| ||||| ||  |||| |||||||||||    
T  2973053 aaattgagacactttataattaagggactaaaatgaaaacaaaaaataagttaagggatcaaataatatattaaac 2973128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13641328 - 13641274
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  |||||||| | |||||||||||||| |||||    
T  13641328 aaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaag 13641274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26056192 - 26056246
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  |||||||||| ||| |||||||||| |||||    
T  26056192 aaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaag 26056246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42244575 - 42244497
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||| |||||||||| | ||||||||| ||| |||||||||| ||||| ||| |||  || |||||||||||    
T  42244575 aaattgagacattttatagttatatgaccaaaatgaaatccaaaaataagttaagggaccaaaacatgtattaaacctt 42244497  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48935155 - 48935233
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||||||  |||||||||| ||| || ||||||| ||||| ||| |||  ||||||||| ||||    
T  48935155 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggacgaaagcatatattaagcctt 48935233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51424322 - 51424268
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||||||| |||||    
T  51424322 aaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaag 51424268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14312846 - 14312773
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||| || | ||||||||| ||| |||||||||| ||||| ||| |||| || ||||||    
T  14312846 aaattgagacactttatagctaggagaccaaaataaaatccaaaaataagttaagggaccaaatcatgtattaa 14312773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29264942 - 29264866
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    ||||| ||||| |||||||||| |||| |||| | |||| ||||||||| ||||| ||| ||||||||||||||||||    
T  29264942 aaattaagacattttatagttagaggatcaaattgaaaatcaaaaataagttaag-gaccaaatgatatattaaacct 29264866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47411493 - 47411566
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || ||||||   |||||| ||||||| ||||| ||| ||||||| ||||||    
T  47411493 aaattgagacactttatagttagggaaccaaatggaaaaccgaaaataagttaagggaccaaatgatgtattaa 47411566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2236884 - 2236804
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaaccttgt 80  Q
    ||||||||||||||||||||||  |||||||||| ||| || ||||||| ||||| ||| |||  || |||||| ||||||    
T  2236884 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagccttgt 2236804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34531734 - 34531658
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||||||||| |||||||||| ||||||||||| ||| || ||||||| ||||| ||| |||  || |||||||||    
T  34531734 aaattgagacattttatagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaaacc 34531658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40135382 - 40135458
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    ||||||||||| |||| ||||| ||||||||||| ||| | |||||||| ||||| |||||||  || |||||||||    
T  40135382 aaattgagacattttaaagttagaggaccaaaatgaaatctaaaaataagttaagggactaaaacatgtattaaacc 40135458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42248350 - 42248398
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataa 48  Q
    ||||||||||||||||||||||  |||||||||| ||| ||||||||||    
T  42248350 aaattgagacactttatagttatgggaccaaaatgaaatccaaaaataa 42248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48501 - 48578
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||||||    
T  48501 aaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaaacct 48578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27438861 - 27438784
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||||||    
T  27438861 aaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaaacct 27438784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2138682 - 2138761
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaaccttg 79  Q
    |||||||||||||||||||||| || |||||||| ||| |||||||||||||||| ||| |||  || |||||| |||||    
T  2138682 aaattgagacactttatagttaggggaccaaaataaaatccaaaaataaattaagggaccaaaacatgtattaagccttg 2138761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5311350 - 5311272
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaatt-aaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| ||  | ||||| |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  5311350 aaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 5311272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33807760 - 33807706
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||| |||||    
T  33807760 aaattgagacactttatagttaagggaccaaagtgaaaaccaaaaataagttaag 33807706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8411157 - 8411084
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaatt-aaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| ||  | ||||| |||||||||||||| |||||  |||||||||| ||||||    
T  8411157 aaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaaggaactaaatgatgtattaa 8411084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8447292 - 8447219
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||||| ||| || ||||||| ||||| |||||||  |||||||||    
T  8447292 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggactaaagcatatattaa 8447219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8456096 - 8456023
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||||| ||| || ||||||| ||||| |||||||  |||||||||    
T  8456096 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggactaaagcatatattaa 8456023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33802062 - 33802135
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||| |||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  33802062 aaattaagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaa 33802135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34084179 - 34084250
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| || ||||||||| | ||||||| |||||| ||||| ||| ||||||| ||||||    
T  34084179 aaattgagacactttata-tttaggaccaaagtgaaaaccagaaataagttaagggaccaaatgatgtattaa 34084250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19368563 - 19368617
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||    
T  19368563 aaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaag 19368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22299948 - 22300026
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||  |||  || |||||||||||    
T  22299948 aaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaagcatgtattaaacctt 22300026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26582024 - 26581970
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||| |||||||||||||| |||||||||| ||| |||||||||| |||||    
T  26582024 aaattgagtcactttatagttaagggaccaaaataaaatccaaaaataagttaag 26581970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31738434 - 31738356
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||| |||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||| ||| |||||| ||||    
T  31738434 aaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaaggatgtattaagcctt 31738356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31740317 - 31740370
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaa 53  Q
    ||||||||||||||||||||||| |||||||| | ||||| |||||||| ||||    
T  31740317 aaattgagacactttatagttaagggaccaaattgaaaacaaaaaataagttaa 31740370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49122047 - 49122120
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||  ||| ||||||||||||||    
T  49122047 aaattgagacactttatagttaagagaccaaaatgaaaaccaaaaataagttaaaggaccaaatgatatattaa 49122120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8372661 - 8372739
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||| ||||| ||| ||| |||||||||| ||||    
T  8372661 aaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaagcctt 8372739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26798951 - 26799024
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| || |||||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  26798951 aaattgagacattttatagttaggggaccaaaataaaaaccaaaaataagttaagagaccaaatgatgtattaa 26799024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54654011 - 54654084
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||    
T  54654011 aaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 54654084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39133088 - 39133012
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacc 76  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||||||  ||||||| |||||||||    
T  39133088 aaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagagatcaaatgatgtattaaacc 39133012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47766996 - 47767048
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaa 53  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  47766996 aaattgagacactttatagttagggaccaaaatgaaaaccaaaaataagttaa 47767048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43101965 - 43101899
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgat 66  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||| ||| |||||||    
T  43101965 aaattgagacactttataattagaggaccaaaatgaaaaccaaaaataagttaagggaccaaatgat 43101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 51825666 - 51825744
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||| ||||||||||||||||| |||||| | ||| |||||||||| ||||| ||| |||||||||||||| ||||    
T  51825666 aaattgaaacactttatagttaagggaccaaagtgaaatccaaaaataagttaagggaccaaatgatatattaagcctt 51825744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10987698 - 10987771
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||| ||||| ||  ||||||| ||||||    
T  10987698 aaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggatcaaatgatgtattaa 10987771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47806889 - 47806816
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||||||| |||||  |||||||||| ||||||    
T  47806889 aaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaaggtactaaatgatgtattaa 47806816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47808151 - 47808224
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||||| |||||| | ||| |||||||||| ||||| |||||| |||| ||||||    
T  47808151 aaattgagacactttatagttaaggaaccaaagtgaaatccaaaaataagttaagggactaagtgatgtattaa 47808224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19622076 - 19621998
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||  ||| ||||||| |||||| ||||    
T  19622076 aaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataacttaaaggaccaaatgatgtattaaccctt 19621998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41386201 - 41386123
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||| ||| |||||| ||||    
T  41386201 aaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaacgatgtattaagcctt 41386123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41387478 - 41387556
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||| |||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  41387478 aaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41387556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47855383 - 47855437
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| |||||    
T  47855383 aaattgagacactttatagttaacggaccaaaatgaaatccaaaaataagttaag 47855437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17350147 - 17350220
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  17350147 aaattgagacactttatagttaggggaacaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 17350220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42632777 - 42632704
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | |||||||||| ||| ||||| ||| ||||||| ||||||    
T  42632777 aaattgagacactttatagttaggggaccaaattgaaaaccaaaagtaagttaagggaccaaatgatgtattaa 42632704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51824197 - 51824124
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||| | ||||| || |||| | ||||| |||||||| ||||||||| ||||||||||||||    
T  51824197 aaattgagacactttaaatttaagagatcaaagtaaaaactaaaaataagttaagagaccaaatgatatattaa 51824124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10986723 - 10986671
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaatta 52  Q
    ||||||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  10986723 aaattgaaacactttatagttaatggaccaaagtgaaaaccaaaaataaatta 10986671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 53808387 - 53808316
Alignment:
Q  3 attgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||| | ||||||| | |||||| ||||||| ||||| ||| ||||||| ||||||    
T  53808387 attgagacactttatagttaggagaccaaattcaaaaccgaaaataagttaagggaccaaatgatgtattaa 53808316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19579339 - 19579393
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| |||||||||| ||| || ||||||| |||||    
T  19579339 aaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaag 19579393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35633298 - 35633244
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||| |||||||||| ||||||||||| ||| |||||||||| |||||    
T  35633298 aaattgagacattttatagttataggaccaaaatgaaatccaaaaataagttaag 35633244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39287541 - 39287487
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||    
T  39287541 aaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaag 39287487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40502260 - 40502338
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||| |||||||||||| || |||||||| ||| |||||||||| ||||| ||| |||  || |||||||||||    
T  40502260 aaattgagatactttatagttaggggaccaaaataaaatccaaaaataagttaagggaccaaaacatgtattaaacctt 40502338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42633931 - 42634009
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||| ||||||||  |||||||| | |||| ||||||||| ||||| ||| ||||||| |||||| ||||    
T  42633931 aaattgagacactctatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaagcctt 42634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 47765506 - 47765432
Alignment:
Q  4 ttgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||| |||||||| | |||||  ||||||| ||||||||  | ||||| |||||| ||||    
T  47765506 ttgagacactttatagttagggaccaaagtgaaaacggaaaataagttaagagagcagatgatgtattaagcctt 47765432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48034080 - 48034026
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||    
T  48034080 aaattgagacactttatagttagaggaccaaaataaaatccgaaaataagttaag 48034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51401396 - 51401450
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  |||||||| | |||||||||||||| |||||    
T  51401396 aaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaag 51401450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8371291 - 8371218
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| ||||||||||  |||||||||| ||||| |||||||| ||||| ||  ||||||| ||||||    
T  8371291 aaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagttaagggatcaaatgatgtattaa 8371218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11219501 - 11219448
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaa 53  Q
    ||||||||||||||||||||||  |||||||||| ||| |||||||||| ||||    
T  11219501 aaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaa 11219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 46446439 - 46446382
Alignment:
Q  2 aattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagac 58  Q
    ||||||||||||||||| |||||| |||||||| |||  | |||||||||||||||||    
T  46446439 aattgagacactttataattaaggcaccaaaataaaattcgaaaataaattaagagac 46446382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 53347044 - 53347097
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||| ||| |||||||||| ||| || ||||||| |||||    
T  53347044 aaattgagacactttatatttagggaccaaaatgaaatccgaaaataagttaag 53347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 53809562 - 53809611
Alignment:
Q  24 ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||| ||||| |||||||| ||||| ||||||||||| ||||||    
T  53809562 ggaccaaaatgaaaacaaaaaataagttaagggactaaatgatgtattaa 53809611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29536785 - 29536737
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataa 48  Q
    |||||||||||||||||||||| |||| |||||| ||| ||||||||||    
T  29536785 aaattgagacactttatagttagaggatcaaaatgaaatccaaaaataa 29536737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 10053792 - 10053867
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| |||||| | |||||||||||||| ||||| ||||||||||| |||||| ||||    
T  10053792 ttgagacactttatagttaagggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagcctt 10053867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29739688 - 29739761
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||| | |||||||||||||||||||||||| ||||||| ||||||    
T  29739688 aaattgagacactttatagttaggggatcaaattgaaaaccaaaaataaattaagagaccaaatgatgtattaa 29739761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37472474 - 37472396
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||| ||||  ||| ||||||| |||||| ||||    
T  37472474 aaattgagacactttatagttagaggaccaaattaaaaaccaaaaataagttaaaggacgaaatgatgtattaagcctt 37472396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4810169 - 4810234
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaagagactaaatgat 66  Q
    ||||||||||| |||||| |||||||||||| | |||||||||||||| ||||| ||| |||||||    
T  4810169 aaattgagacattttataattaaggaccaaattaaaaaccaaaaataagttaagggacgaaatgat 4810234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 8395071 - 8395022
Alignment:
Q  24 ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  8395071 ggaccaaaataaaaaccaaaaataagttaagagaccaaatgatatattaa 8395022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16363857 - 16363930
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||| |||||||||||| ||||||||| | |||||||||||||| ||||| ||| |||| |||||||||    
T  16363857 aaattgagatactttatagttagaggaccaaagtgaaaaccaaaaataagttaagggaccaaattatatattaa 16363930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36070249 - 36070176
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||||||||| ||  ||||||| ||||||    
T  36070249 aaattgagacactttatagttaggggaccaaattgaaaaccaaaaataaattaagggatcaaatgatgtattaa 36070176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37276288 - 37276361
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| ||| |||| | |||| ||||||||||||||| ||| ||||||| ||||||    
T  37276288 aaattgagacactttatagttaagggatcaaagtgaaaatcaaaaataaattaagggaccaaatgatgtattaa 37276361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37323419 - 37323346
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaatt-aaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| ||| | ||||| |||||||||||||||||||| ||| ||||||| ||||||    
T  37323419 aaattgagacattttatagttagggaaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaa 37323346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41867961 - 41868034
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||| | ||||| |||||||||||||| ||| ||||||| ||||||    
T  41867961 aaattgagacactttatagttaggggaccaaagtgaaaactaaaaataaattaagggaccaaatgatgtattaa 41868034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43275821 - 43275748
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || |||||| | ||||| |||||||| ||||||||| ||||||| ||||||    
T  43275821 aaattgagacactttatagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaatgatgtattaa 43275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21267235 - 21267181
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||| |||||    
T  21267235 aaattgagacactttatagttagaggaccaaagtgaaaaccaaaaataagttaag 21267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24068401 - 24068347
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaag 54  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||| |||||    
T  24068401 aaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaag 24068347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24069491 - 24069545
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||    
T  24069491 aaattgagacactttatagttaagggatcaaaatgaaaaccaaaaataagttaag 24069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31623977 - 31623904
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||| |||||||||||||| || |||||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  31623977 aaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 31623904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37274958 - 37274905
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaa 53  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||    
T  37274958 aaattgagacactttatagttagaggaccaaaatgaaatccaaaaataagttaa 37274905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37474081 - 37474154
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||| | ||||||| |||||| ||||| ||  ||||||| ||||||    
T  37474081 aaattgagacactttatagttaagggaccaaattgaaaaccataaataagttaagggatgaaatgatgtattaa 37474154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38591052 - 38591125
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | |||| ||||||||| ||||| ||| ||||||| ||||||    
T  38591052 aaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaa 38591125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37324733 - 37324808
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaac 75  Q
    ||||||||||| |||||||||| || |||||| | |||||||||||||| ||||| || |||||||  ||||||||    
T  37324733 aaattgagacattttatagttaggggaccaaattaaaaaccaaaaataagttaagggattaaatgacgtattaaac 37324808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 24703276 - 24703226
Alignment:
Q  4 ttgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaag 54  Q
    |||||||| |||| |||||||||||||||| ||| |||||||||| |||||    
T  24703276 ttgagacaatttaaagttaaggaccaaaatgaaatccaaaaataagttaag 24703226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38589891 - 38589814
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    |||||||| ||||||||||||| |||||| ||||| ||| ||||||||| ||||| ||| ||||||| |||||| ||||    
T  38589891 aaattgagccactttatagttagaggacc-aaattgaaaacaaaaataagttaagggaccaaatgatgtattaagcctt 38589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7486148 - 7486095
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaa 53  Q
    |||||||  |||||||||||||||| | |||||| |||||||||||||||||||    
T  7486148 aaattgaagcactttatagttaagggatcaaaatgaaaaccaaaaataaattaa 7486095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19914951 - 19915004
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaa 53  Q
    ||||||||||||||||||||||| |||||||| | |||||| ||||||| ||||    
T  19914951 aaattgagacactttatagttaagggaccaaattgaaaacccaaaataagttaa 19915004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36940078 - 36940151
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||| |||||||||||||| || | |||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  36940078 aaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaa 36940151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43386747 - 43386820
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| |||||||||| || |||||| | |||||||||||||| ||||| ||| | ||||| ||||||    
T  43386747 aaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaa 43386820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14820264 - 14820192
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatatta 72  Q
    ||||||||||||||||||||||  |||||||| | ||| |||||||||| ||||| ||| || |||| |||||    
T  14820264 aaattgagacactttatagttaggggaccaaattaaaatccaaaaataagttaagggaccaattgatgtatta 14820192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23177745 - 23177671
Alignment:
Q  1 aaattgagacactttatagttaagg--accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| ||  |||||||| |||||||||||||||||||| ||| ||||||| ||||||    
T  23177745 aaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaa 23177671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23589002 - 23588928
Alignment:
Q  1 aaattgagacactttatagttaagg--accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| ||  |||||||| |||||||||||||||||||| ||| ||||||| ||||||    
T  23589002 aaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaa 23588928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7038377 - 7038450
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||    
T  7038377 aaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 7038450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10368430 - 10368507
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacct 77  Q
    |||||||||||||||||||||| || | |||| | |||| ||||||||||||||| ||| ||||||| ||||||||||    
T  10368430 aaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaagggaccaaatgatgtattaaacct 10368507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41795997 - 41796070
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||||| |||| ||||||||| ||||| ||||||||||| ||||||    
T  41795997 aaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagggactaaatgatgtattaa 41796070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 4701535 - 4701605
Alignment:
Q  4 ttgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||| || | |||| | |||| ||||||||||||||| ||| ||||||||||||||    
T  4701535 ttgagacactttatagttaggggatcaaagtgaaaatcaaaaataaattaagggaccaaatgatatattaa 4701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10477413 - 10477355
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagac 58  Q
    |||||||||||||||||| ||||| ||||||||| ||| |||||||||| |||||||||    
T  10477413 aaattgagacactttataattaagagaccaaaatgaaatccaaaaataagttaagagac 10477355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11575500 - 11575578
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||| ||| |||||||||| || ||||||||||||||||||||||| ||||  ||| ||||||| |||||| ||||    
T  11575500 aaattgaaacattttatagttaggggaccaaaattaaaaccaaaaataagttaatggaccaaatgatgtattaagcctt 11575578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12958487 - 12958410
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||||||  ||| |||| | |||||||||||||| |||||| || |||||||||||||| ||||    
T  12958487 aaattgagacactttatagttaggggatcaaattaaaaaccaaaaataagttaaga-accaaatgatatattaagcctt 12958410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37869085 - 37869163
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||||||||||||||| |||||||| | |||| ||||||||| ||||| ||| |||  ||||||||| ||||    
T  37869085 aaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaagggaccaaacaatatattaagcctt 37869163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37867827 - 37867754
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||||||| || | |||| | |||||||||||||| ||||| ||| ||||||| ||||||    
T  37867827 aaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 37867754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42029003 - 42029076
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||| ||||||||||||||||| | ||||||||| |||||||||||||  ||||| ||| ||||||| ||||||    
T  42029003 aaatcgagacactttatagttagatgaccaaaatgaaaaccaaaaatacgttaagggaccaaatgatgtattaa 42029076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6706997 - 6706943
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  |||||||||| ||| |||||||||| |||||    
T  6706997 aaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaag 6706943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12854149 - 12854203
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||| |||||||||| ||| | |||||||| |||||    
T  12854149 aaattgagacactttatagttaagggaccaaaatgaaatctaaaaataagttaag 12854203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15268452 - 15268394
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagac 58  Q
    ||||||||||| ||||||||||| ||| |||||| ||| |||||||||| |||||||||    
T  15268452 aaattgagacattttatagttaagggatcaaaatcaaatccaaaaataagttaagagac 15268394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 21010542 - 21010612
Alignment:
Q  4 ttgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||| | ||| ||||| ||||| |||||||| ||||| ||  ||||||||||||||    
T  21010542 ttgagacactttatagttaggagactaaaataaaaacaaaaaataagttaagggatcaaatgatatattaa 21010612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1625021 - 1625074
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaattaaaaccaaaaataaattaag 54  Q
    ||||||||||||||||||||||  || |||||| ||| |||||||||| |||||    
T  1625021 aaattgagacactttatagttagagatcaaaatgaaatccaaaaataagttaag 1625074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4628953 - 4628880
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||| ||||||||  || ||||||||||| ||| |||||||||| ||||| |||||||  |||||||||    
T  4628953 aaattgagatactttatatatagaggaccaaaataaaatccaaaaataagttaagggactaaagcatatattaa 4628880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12959750 - 12959823
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||| ||||| |||||||| | |||| ||||||||| |||||  || ||| ||||||||||    
T  12959750 aaattgagacactttattgttaagggaccaaattaaaaatcaaaaataagttaaggaaccaaacgatatattaa 12959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35799583 - 35799510
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||| ||| | |||||||||||||| ||||| ||  ||||||| ||||||    
T  35799583 aaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggatgaaatgatgtattaa 35799510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42027264 - 42027191
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||| ||| |||||| ||||||||||| |||| ||||||||| ||||| ||| ||| ||| ||||||    
T  42027264 aaattgagacattttgtagttagaggaccaaaatgaaaatcaaaaataagttaagggaccaaacgatgtattaa 42027191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2583591 - 2583639
Alignment:
Q  1 aaattgagacactttatagttaaggaccaaaatt-aaaaccaaaaataa 48  Q
    |||||||||||||||||||||| ||  ||||||| ||||||||||||||    
T  2583591 aaattgagacactttatagttaggggacaaaattaaaaaccaaaaataa 2583639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12981 - 12908
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| |||  |||||||| | |||| ||||||||| ||||||||| |||| |||||||||    
T  12981 aaattgagacactttataattatgggaccaaagtaaaaatcaaaaataagttaagagaccaaataatatattaa 12908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 77226 - 77297
Alignment:
Q  1 aaattgagacactttatagttaag-gaccaaaattaaaaccaaaaataaattaagagactaaatgatatatt 71  Q
    ||||||| || ||||||||||| | ||||||| | ||||| |||||||| ||||||||||||||||| ||||    
T  77226 aaattgaaacgctttatagttaggagaccaaagtgaaaacaaaaaataagttaagagactaaatgatgtatt 77297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23477 - 23399
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||||||| |||||||||| || |||||| | |||||||||||||| ||||| ||| | ||||| |||||| ||||    
T  23477 aaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagcctt 23399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24860 - 24938
Alignment:
Q  1 aaattgagacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaaacctt 78  Q
    ||||||| |||||||||| ||| || |||||| | |||||||||||||||||||| ||| ||| ||| |||||| ||||    
T  24860 aaattgaaacactttataattaggggaccaaactgaaaaccaaaaataaattaagggaccaaacgatgtattaagcctt 24938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 73038 - 73104
Alignment:
Q  8 gacactttatagttaagg-accaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||| |||| || |||||| | |||||||||||||| ||||| ||||||||||| ||||||    
T  73038 gacactttattgttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaa 73104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 673 - 746
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | | ||| |||||||| ||||| ||| ||||||| ||||||    
T  673 aaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaa 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 601 - 528
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | | ||| |||||||| ||||| ||| ||||||| ||||||    
T  601 aaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaa 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9523 - 9596
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    ||||||||||||||||||||||  |||||||| | | ||| |||||||| ||||| ||| ||||||| ||||||    
T  9523 aaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaa 9596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39946 - 40019
Alignment:
Q  1 aaattgagacactttatagtta-aggaccaaaattaaaaccaaaaataaattaagagactaaatgatatattaa 73  Q
    |||||||||||||||||| |||  |||||||| | ||| |||||||||| ||||||||| |||| || ||||||    
T  39946 aaattgagacactttatacttaggggaccaaagtgaaatccaaaaataagttaagagaccaaataatgtattaa 40019  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54662 - 54618
Alignment:
Q  1 aaattgagacactttatagttaa-ggaccaaaattaaaaccaaaa 44  Q
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T  54662 aaattgagacactttataattaaaggaccaaaataaaaaccaaaa 54618  T

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