View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1262_low_13 (Length: 501)
Name: NF1262_low_13
Description: NF1262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1262_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 31045195 - 31045341
Alignment:
| Q |
8 |
ccaacaatatgaatatataaaataatcttttattagaaaataaaaattacatgtacaaggaaaaagaatggtgaaacatgtactataattaagatcaatt |
107 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31045195 |
ccaaaaatatgaatatataaaataatcttttattagaaaataaaaattacacgtacaaggaaaaagaatggtgaaacatgtactataattaagatcaatt |
31045294 |
T |
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| Q |
108 |
taagcttatcttcaacaaaggtaattaactagcttggttggtaagta |
154 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31045295 |
taagcttatcttcaacaatggtaattaactagcttggttggtaagta |
31045341 |
T |
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